AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0859950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859950 MtrunA17_Chr5g0439011 98.428 318 5 0 1 318 1 318 0.0 652
Msa0859950 MtrunA17_Chr3g0121141 86.120 317 40 1 2 318 1 313 0.0 574
Msa0859950 MtrunA17_Chr2g0289341 73.668 319 80 2 2 318 1 317 0.0 502
Msa0859950 MtrunA17_Chr3g0125201 49.196 311 146 3 3 306 1 306 9.00e-106 311
Msa0859950 MtrunA17_Chr6g0488511 47.403 308 147 5 3 306 1 297 1.72e-98 292
Msa0859950 MtrunA17_Chr4g0075471 79.856 139 27 1 155 293 24 161 7.31e-79 237
Msa0859950 MtrunA17_Chr4g0075431 64.634 164 57 1 2 165 1 163 2.12e-69 214
Msa0859950 MtrunA17_Chr5g0437181 38.019 313 179 6 4 306 48 355 3.18e-69 219
Msa0859950 MtrunA17_Chr4g0006371 35.463 313 188 5 3 305 60 368 2.40e-65 210
Msa0859950 MtrunA17_Chr3g0113641 36.593 317 184 7 3 308 48 358 7.91e-65 208
Msa0859950 MtrunA17_Chr7g0242551 36.422 313 185 6 3 305 52 360 1.12e-64 208
Msa0859950 MtrunA17_Chr3g0109041 35.314 303 172 9 5 288 42 339 3.66e-56 186
Msa0859950 MtrunA17_Chr8g0345831 37.329 292 165 9 4 286 41 323 5.22e-56 185
Msa0859950 MtrunA17_Chr8g0375571 35.000 280 157 6 6 269 46 316 1.81e-54 181
Msa0859950 MtrunA17_Chr8g0375671 34.875 281 160 7 2 267 49 321 2.92e-54 181
Msa0859950 MtrunA17_Chr8g0375601 32.680 306 185 8 5 298 48 344 2.07e-53 179
Msa0859950 MtrunA17_Chr5g0423191 31.579 304 194 5 2 298 44 340 3.34e-51 172
Msa0859950 MtrunA17_Chr8g0371931 36.803 269 155 7 5 262 39 303 9.90e-50 169
Msa0859950 MtrunA17_Chr5g0420981 30.464 302 193 6 6 298 54 347 1.10e-49 169
Msa0859950 MtrunA17_Chr8g0371921 36.059 269 157 7 5 262 39 303 1.93e-49 168
Msa0859950 MtrunA17_Chr5g0420951 31.023 303 190 6 6 298 54 347 2.30e-49 168
Msa0859950 MtrunA17_Chr1g0184101 33.784 296 178 5 4 290 37 323 2.59e-49 167
Msa0859950 MtrunA17_Chr3g0128001 33.562 292 174 7 4 286 37 317 3.30e-49 167
Msa0859950 MtrunA17_Chr5g0421041 31.353 303 194 5 3 298 43 338 3.68e-49 167
Msa0859950 MtrunA17_Chr8g0365241 30.363 303 192 6 6 298 58 351 4.58e-49 167
Msa0859950 MtrunA17_Chr5g0423201 32.226 301 189 5 6 298 48 341 6.05e-49 167
Msa0859950 MtrunA17_Chr7g0220001 33.443 305 183 7 8 304 41 333 1.78e-48 165
Msa0859950 MtrunA17_Chr5g0412681 34.615 286 166 6 4 278 32 307 2.61e-48 165
Msa0859950 MtrunA17_Chr5g0421011 31.000 300 193 5 6 298 48 340 3.61e-48 165
Msa0859950 MtrunA17_Chr5g0423251 30.921 304 196 5 2 298 44 340 4.62e-48 164
Msa0859950 MtrunA17_Chr7g0239111 32.302 291 183 5 5 288 55 338 4.63e-48 165
Msa0859950 MtrunA17_Chr5g0420941 31.457 302 191 6 5 298 45 338 5.34e-48 164
Msa0859950 MtrunA17_Chr5g0426891 32.765 293 183 8 5 289 39 325 5.36e-47 161
Msa0859950 MtrunA17_Chr5g0405411 35.688 269 158 7 5 262 39 303 6.18e-47 161
Msa0859950 MtrunA17_Chr5g0421091 31.250 304 190 7 5 298 45 339 1.22e-46 160
Msa0859950 MtrunA17_Chr1g0162191 33.088 272 169 6 5 267 47 314 1.33e-45 158
Msa0859950 MtrunA17_Chr2g0314401 31.148 305 196 6 2 298 48 346 1.38e-45 158
Msa0859950 MtrunA17_Chr2g0296371 32.248 307 189 7 4 298 49 348 1.88e-45 158
Msa0859950 MtrunA17_Chr1g0184161 32.852 277 165 5 6 270 39 306 1.96e-45 157
Msa0859950 MtrunA17_Chr5g0423221 29.000 300 200 5 6 298 72 365 2.24e-45 158
Msa0859950 MtrunA17_Chr2g0314381 30.921 304 196 6 3 298 75 372 2.27e-45 158
Msa0859950 MtrunA17_Chr2g0311761 34.201 269 159 5 18 275 83 344 2.52e-45 157
Msa0859950 MtrunA17_Chr2g0311701 32.353 306 171 10 3 287 67 357 2.98e-45 158
Msa0859950 MtrunA17_Chr6g0455481 33.228 316 178 7 8 308 42 339 4.13e-45 156
Msa0859950 MtrunA17_Chr2g0311681 31.761 318 177 11 3 297 61 361 4.74e-45 157
Msa0859950 MtrunA17_Chr1g0187831 33.775 302 175 11 3 290 68 358 9.70e-45 157
Msa0859950 MtrunA17_Chr1g0187811 34.219 301 170 12 6 290 189 477 1.34e-44 158
Msa0859950 MtrunA17_Chr2g0311741 34.202 307 168 11 3 292 25 314 2.75e-44 154
Msa0859950 MtrunA17_Chr2g0311921 32.979 282 172 5 18 290 69 342 2.90e-44 154
Msa0859950 MtrunA17_Chr8g0336751 36.885 244 138 6 18 253 109 344 3.27e-44 155
Msa0859950 MtrunA17_Chr2g0311831 33.663 303 171 9 6 292 69 357 3.48e-44 155
Msa0859950 MtrunA17_Chr2g0311711 34.256 289 156 10 1 269 63 337 4.11e-44 154
Msa0859950 MtrunA17_Chr5g0412671 33.910 289 172 7 4 278 37 320 4.58e-44 154
Msa0859950 MtrunA17_Chr5g0421101 28.333 300 201 5 6 298 48 340 6.16e-44 154
Msa0859950 MtrunA17_Chr7g0239121 31.525 295 181 7 5 288 51 335 6.27e-44 154
Msa0859950 MtrunA17_Chr1g0184111 30.034 293 190 7 6 290 38 323 8.06e-44 153
Msa0859950 MtrunA17_Chr8g0348081 32.781 302 178 9 5 292 60 350 1.10e-43 153
Msa0859950 MtrunA17_Chr1g0184121 32.482 274 171 6 6 270 38 306 1.18e-43 152
Msa0859950 MtrunA17_Chr2g0311691 31.949 313 183 11 3 297 61 361 1.50e-43 153
Msa0859950 MtrunA17_Chr5g0412651 32.013 303 178 8 4 287 37 330 1.56e-43 152
Msa0859950 MtrunA17_Chr5g0420901 30.464 302 194 6 5 298 46 339 1.94e-43 152
Msa0859950 MtrunA17_Chr3g0102041 33.457 269 164 6 5 262 39 303 2.14e-43 152
Msa0859950 MtrunA17_Chr8g0375701 31.095 283 183 4 22 298 71 347 2.48e-43 152
Msa0859950 MtrunA17_Chr7g0266651 32.026 306 188 8 4 298 58 354 3.58e-43 152
Msa0859950 MtrunA17_Chr2g0319491 32.990 291 166 8 6 286 34 305 3.64e-43 151
Msa0859950 MtrunA17_Chr7g0239101 30.719 306 188 7 5 298 55 348 3.83e-43 152
Msa0859950 MtrunA17_Chr7g0239821 31.615 291 178 5 19 298 77 357 6.82e-43 151
Msa0859950 MtrunA17_Chr4g0066121 34.495 287 163 9 5 275 60 337 1.77e-42 150
Msa0859950 MtrunA17_Chr5g0398291 32.203 295 183 6 6 287 48 338 1.80e-42 150
Msa0859950 MtrunA17_Chr1g0184151 33.455 275 170 4 4 270 37 306 2.72e-42 149
Msa0859950 MtrunA17_Chr4g0064781 31.923 260 165 5 2 254 47 301 3.09e-42 149
Msa0859950 MtrunA17_Chr3g0145171 29.455 275 182 6 3 268 50 321 1.03e-41 148
Msa0859950 MtrunA17_Chr2g0311861 34.892 278 155 8 18 292 79 333 1.29e-41 147
Msa0859950 MtrunA17_Chr1g0167911 35.452 299 155 10 6 282 55 337 1.63e-41 147
Msa0859950 MtrunA17_Chr4g0050031 32.792 308 184 9 5 299 62 359 2.77e-41 147
Msa0859950 MtrunA17_Chr2g0314391 29.508 305 201 5 2 298 67 365 3.82e-41 147
Msa0859950 MtrunA17_Chr7g0220011 29.831 295 184 9 8 290 39 322 5.58e-41 145
Msa0859950 MtrunA17_Chr7g0235951 31.329 316 177 12 3 298 65 360 5.82e-41 146
Msa0859950 MtrunA17_Chr1g0179801 32.639 288 173 7 3 275 64 345 7.45e-41 146
Msa0859950 MtrunA17_Chr8g0364471 31.596 307 177 9 3 290 65 357 7.80e-41 146
Msa0859950 MtrunA17_Chr8g0336861 31.290 310 181 9 5 298 60 353 9.74e-41 145
Msa0859950 MtrunA17_Chr8g0375681 30.483 269 174 6 37 298 15 277 1.06e-40 144
Msa0859950 MtrunA17_Chr4g0055591 30.195 308 179 9 4 292 57 347 1.51e-40 145
Msa0859950 MtrunA17_Chr8g0370711 30.592 304 194 9 6 300 53 348 2.47e-40 144
Msa0859950 MtrunA17_Chr8g0336851 31.359 287 171 8 5 275 60 336 3.61e-40 144
Msa0859950 MtrunA17_Chr8g0336631 32.872 289 163 10 6 275 61 337 5.26e-40 144
Msa0859950 MtrunA17_Chr8g0336781 31.615 291 174 9 1 275 91 372 8.83e-40 144
Msa0859950 MtrunA17_Chr1g0187821 32.781 302 177 10 3 290 65 354 1.20e-39 142
Msa0859950 MtrunA17_Chr8g0336761 32.404 287 166 9 6 275 61 336 1.39e-39 142
Msa0859950 MtrunA17_Chr7g0239071 29.831 295 190 7 12 298 8 293 1.60e-39 141
Msa0859950 MtrunA17_Chr3g0087031 30.822 292 188 8 3 287 58 342 2.23e-39 142
Msa0859950 MtrunA17_Chr5g0424201 32.993 294 180 9 3 287 42 327 2.91e-39 141
Msa0859950 MtrunA17_Chr4g0045451 30.508 295 177 6 6 278 33 321 3.77e-39 141
Msa0859950 MtrunA17_Chr1g0162361 31.058 293 175 8 6 278 28 313 3.80e-39 140
Msa0859950 MtrunA17_Chr8g0354261 32.990 291 151 11 3 267 66 338 1.08e-38 140
Msa0859950 MtrunA17_Chr3g0126741 32.384 281 171 6 1 269 55 328 1.18e-38 140
Msa0859950 MtrunA17_Chr5g0423211 28.431 306 197 8 5 298 47 342 2.99e-38 139
Msa0859950 MtrunA17_Chr4g0045471 31.126 302 173 10 6 278 27 322 3.12e-38 139
Msa0859950 MtrunA17_Chr7g0232161 34.545 220 134 3 24 236 78 294 3.29e-38 138
Msa0859950 MtrunA17_Chr3g0093751 33.444 302 168 11 4 290 55 338 3.68e-38 138
Msa0859950 MtrunA17_Chr4g0045441 29.352 293 183 6 6 278 33 321 4.94e-38 138
Msa0859950 MtrunA17_Chr1g0162351 28.713 303 184 7 4 278 68 366 6.12e-38 139
Msa0859950 MtrunA17_Chr7g0247991 31.148 305 175 12 3 287 65 354 7.97e-38 138
Msa0859950 MtrunA17_Chr8g0354241 33.452 281 163 11 3 267 66 338 1.13e-37 137
Msa0859950 MtrunA17_Chr5g0420721 32.618 233 149 3 68 298 16 242 1.30e-37 134
Msa0859950 MtrunA17_Chr3g0093761 32.450 302 170 12 4 290 55 337 2.17e-37 136
Msa0859950 MtrunA17_Chr7g0250511 32.667 300 181 9 4 292 48 337 3.48e-37 135
Msa0859950 MtrunA17_Chr8g0335411 31.511 311 188 12 3 298 65 365 3.68e-37 136
Msa0859950 MtrunA17_Chr8g0370721 29.889 271 178 6 6 267 53 320 4.41e-37 135
Msa0859950 MtrunA17_Chr1g0167951 33.452 281 169 7 6 275 54 327 4.89e-37 135
Msa0859950 MtrunA17_Chr3g0105281 30.686 277 159 7 23 286 45 301 5.02e-37 135
Msa0859950 MtrunA17_Chr1g0162321 28.289 304 184 7 4 278 68 366 5.44e-37 136
Msa0859950 MtrunA17_Chr7g0265221 28.028 289 191 4 3 275 65 352 5.92e-37 136
Msa0859950 MtrunA17_Chr3g0093741 32.787 305 166 12 4 290 55 338 7.74e-37 135
Msa0859950 MtrunA17_Chr4g0066991 31.438 299 172 9 3 292 65 339 1.03e-36 134
Msa0859950 MtrunA17_Chr2g0332191 29.195 298 187 8 6 291 53 338 1.10e-36 135
Msa0859950 MtrunA17_Chr2g0311631 29.712 313 191 10 4 299 54 354 1.25e-36 134
Msa0859950 MtrunA17_Chr4g0045411 31.852 270 166 7 11 266 43 308 1.45e-36 134
Msa0859950 MtrunA17_Chr3g0114861 31.667 300 184 8 3 289 38 329 7.37e-36 132
Msa0859950 MtrunA17_Chr1g0167961 33.205 259 157 7 4 253 68 319 1.45e-35 132
Msa0859950 MtrunA17_Chr5g0424211 31.429 280 172 9 3 269 40 312 2.00e-35 130
Msa0859950 MtrunA17_Chr7g0265351 30.795 302 170 10 4 287 38 318 2.20e-35 130
Msa0859950 MtrunA17_Chr6g0472861 31.475 305 177 13 3 290 68 357 3.80e-35 131
Msa0859950 MtrunA17_Chr2g0313111 30.108 279 181 6 16 286 33 305 7.70e-35 129
Msa0859950 MtrunA17_Chr1g0184241 29.836 305 183 8 2 292 66 353 1.11e-34 129
Msa0859950 MtrunA17_Chr1g0161041 29.545 308 163 12 6 287 97 376 1.14e-34 130
Msa0859950 MtrunA17_Chr7g0225881 31.907 257 157 9 6 253 68 315 1.53e-34 129
Msa0859950 MtrunA17_Chr3g0145181 26.978 278 180 6 22 281 69 341 1.62e-34 129
Msa0859950 MtrunA17_Chr3g0092531 30.249 281 182 6 21 296 26 297 4.40e-34 127
Msa0859950 MtrunA17_Chr1g0167931 32.937 252 128 6 4 253 53 265 8.83e-34 126
Msa0859950 MtrunA17_Chr1g0161111 30.645 310 176 10 6 299 133 419 2.49e-33 127
Msa0859950 MtrunA17_Chr1g0161081 28.525 305 178 10 5 290 73 356 2.86e-32 123
Msa0859950 MtrunA17_Chr3g0145201 27.237 257 171 5 22 267 704 955 4.26e-32 126
Msa0859950 MtrunA17_Chr1g0148771 29.057 265 172 6 6 263 64 319 6.46e-32 122
Msa0859950 MtrunA17_Chr7g0236011 30.323 310 181 11 3 292 65 359 8.10e-32 122
Msa0859950 MtrunA17_Chr2g0285931 28.289 304 177 8 13 288 25 315 8.10e-32 121
Msa0859950 MtrunA17_Chr4g0045461 30.479 292 180 7 6 278 33 320 2.23e-31 120
Msa0859950 MtrunA17_Chr4g0045431 29.927 274 152 7 22 267 49 310 3.50e-31 120
Msa0859950 MtrunA17_Chr8g0351101 26.045 311 201 9 20 311 72 372 4.83e-31 120
Msa0859950 MtrunA17_Chr4g0011311 30.932 236 139 8 2 224 64 288 2.75e-30 116
Msa0859950 MtrunA17_Chr7g0235981 32.489 237 133 6 36 259 55 277 4.53e-30 116
Msa0859950 MtrunA17_Chr7g0239091 29.276 304 202 7 4 306 159 450 4.68e-30 118
Msa0859950 MtrunA17_Chr5g0394071 34.104 173 101 3 114 286 4 163 1.42e-29 111
Msa0859950 MtrunA17_Chr8g0384461 25.413 303 202 11 3 289 45 339 4.83e-29 114
Msa0859950 MtrunA17_Chr8g0358941 28.387 310 202 8 16 309 32 337 5.57e-29 113
Msa0859950 MtrunA17_Chr3g0126761 39.241 158 94 2 112 269 44 199 7.96e-29 110
Msa0859950 MtrunA17_Chr5g0420881 37.226 137 83 1 163 299 4 137 1.60e-28 107
Msa0859950 MtrunA17_Chr1g0204181 28.852 305 179 10 3 283 57 347 2.12e-28 112
Msa0859950 MtrunA17_Chr3g0125421 28.105 306 186 13 6 289 37 330 4.16e-28 111
Msa0859950 MtrunA17_Chr6g0474391 26.623 308 182 8 3 283 62 352 8.55e-28 111
Msa0859950 MtrunA17_Chr4g0052251 26.148 283 176 7 25 286 43 313 7.36e-27 107
Msa0859950 MtrunA17_Chr8g0384481 26.740 273 181 8 25 285 81 346 8.86e-27 108
Msa0859950 MtrunA17_Chr1g0191201 25.828 302 198 12 6 289 54 347 9.77e-27 108
Msa0859950 MtrunA17_Chr2g0314371 26.966 267 160 6 3 239 50 311 1.36e-26 107
Msa0859950 MtrunA17_Chr5g0407781 26.045 311 197 10 1 299 1 290 1.93e-26 105
Msa0859950 MtrunA17_Chr8g0336801 43.103 116 62 3 163 275 14 128 3.79e-26 101
Msa0859950 MtrunA17_Chr4g0068891 25.733 307 196 9 5 295 20 310 5.21e-26 105
Msa0859950 MtrunA17_Chr3g0114871 31.416 226 144 6 8 224 42 265 1.32e-25 103
Msa0859950 MtrunA17_Chr3g0130391 25.890 309 199 11 6 292 67 367 9.60e-25 102
Msa0859950 MtrunA17_Chr8g0348951 26.452 310 192 9 1 289 1 295 1.04e-24 101
Msa0859950 MtrunA17_Chr4g0064771 33.514 185 116 4 113 292 27 209 1.09e-24 99.4
Msa0859950 MtrunA17_Chr7g0233661 36.000 150 83 3 137 286 1 137 1.40e-24 97.4
Msa0859950 MtrunA17_Chr1g0158011 31.128 257 153 12 42 288 1 243 1.57e-24 100
Msa0859950 MtrunA17_Chr7g0247741 27.857 280 169 10 28 289 31 295 1.19e-23 99.0
Msa0859950 MtrunA17_Chr8g0389941 28.939 311 181 13 21 299 47 349 1.58e-23 99.0
Msa0859950 MtrunA17_Chr4g0053251 26.616 263 167 7 20 262 33 289 2.59e-23 98.2
Msa0859950 MtrunA17_Chr1g0194321 27.044 318 194 11 3 295 18 322 2.67e-23 98.2
Msa0859950 MtrunA17_Chr6g0486831 29.305 331 188 15 5 299 18 338 3.15e-23 98.2
Msa0859950 MtrunA17_Chr4g0037611 36.478 159 87 4 129 286 8 153 7.44e-23 93.6
Msa0859950 MtrunA17_Chr8g0362741 31.373 204 115 8 33 224 83 273 1.56e-22 95.1
Msa0859950 MtrunA17_Chr4g0055911 28.674 279 169 11 3 260 7 276 2.24e-22 95.5
Msa0859950 MtrunA17_Chr1g0170631 29.208 202 133 4 112 311 3 196 4.73e-22 91.7
Msa0859950 MtrunA17_Chr4g0055871 28.727 275 169 11 3 260 7 271 2.75e-21 92.0
Msa0859950 MtrunA17_Chr5g0407731 25.000 300 194 8 5 293 33 312 2.67e-20 89.7
Msa0859950 MtrunA17_Chr2g0319521 35.652 115 70 2 110 224 14 124 4.19e-20 84.7
Msa0859950 MtrunA17_Chr8g0336871 37.013 154 84 4 125 275 3 146 9.11e-20 85.1
Msa0859950 MtrunA17_Chr3g0092581 29.143 175 118 4 122 296 1 169 9.22e-20 85.5
Msa0859950 MtrunA17_Chr1g0158031 35.762 151 87 6 122 268 1 145 1.36e-18 82.0
Msa0859950 MtrunA17_Chr8g0364171 36.522 115 65 3 112 224 18 126 3.44e-18 79.7
Msa0859950 MtrunA17_Chr4g0004071 27.000 300 193 10 5 290 9 296 6.91e-18 82.8
Msa0859950 MtrunA17_Chr1g0167921 34.247 146 82 4 88 223 15 156 1.49e-17 79.0
Msa0859950 MtrunA17_Chr2g0293931 29.255 188 123 6 115 295 10 194 6.51e-17 78.2
Msa0859950 MtrunA17_Chr1g0158021 28.155 206 134 9 17 216 64 261 1.15e-16 78.6
Msa0859950 MtrunA17_Chr8g0375581 46.774 62 33 0 159 220 24 85 2.17e-16 73.2
Msa0859950 MtrunA17_Chr4g0004061 27.393 303 189 12 5 290 9 297 7.15e-16 77.0
Msa0859950 MtrunA17_Chr3g0138351 24.528 318 197 11 3 294 5 305 1.51e-15 75.9
Msa0859950 MtrunA17_Chr1g0161101 44.211 95 42 4 163 256 409 493 1.20e-14 74.3
Msa0859950 MtrunA17_Chr2g0311611 42.029 69 32 2 163 224 4 71 1.47e-13 65.1
Msa0859950 MtrunA17_Chr7g0219991 34.545 110 68 1 113 222 249 354 4.03e-13 69.3
Msa0859950 MtrunA17_Chr8g0336831 29.412 170 102 6 24 183 82 243 6.83e-13 67.4
Msa0859950 MtrunA17_Chr4g0009541 27.419 186 126 6 105 287 117 296 7.00e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859950 AT1G05010.1 73.520 321 79 4 2 316 1 321 4.45e-177 493
Msa0859950 AT1G12010.1 69.062 320 92 2 1 318 3 317 1.98e-171 478
Msa0859950 AT1G62380.1 68.239 318 94 2 3 318 5 317 2.68e-170 475
Msa0859950 AT2G19590.1 47.557 307 147 4 3 307 9 303 7.04e-105 309
Msa0859950 AT1G77330.1 48.726 314 142 5 3 306 1 305 1.05e-98 293
Msa0859950 AT2G19590.2 48.364 275 128 4 35 307 26 288 9.90e-94 280
Msa0859950 AT5G05600.1 35.836 293 174 5 4 286 61 349 8.73e-59 193
Msa0859950 AT3G11180.1 34.700 317 188 7 3 311 93 398 1.20e-57 191
Msa0859950 AT3G11180.2 34.603 315 184 7 3 301 93 401 1.68e-57 191
Msa0859950 AT2G38240.1 33.673 294 183 5 3 289 46 334 1.49e-56 187
Msa0859950 AT4G10490.1 35.452 299 181 7 4 295 41 334 2.51e-56 186
Msa0859950 AT5G24530.1 34.122 296 178 6 4 290 37 324 1.19e-55 184
Msa0859950 AT4G16330.2 37.500 280 153 8 23 288 80 351 7.44e-54 180
Msa0859950 AT4G10500.1 33.333 294 175 7 4 286 43 326 3.78e-51 172
Msa0859950 AT3G55970.1 34.307 274 169 4 5 267 52 325 8.78e-51 172
Msa0859950 AT1G78550.1 31.229 301 193 6 6 298 54 348 4.92e-50 170
Msa0859950 AT3G51240.1 37.175 269 154 7 5 262 38 302 2.21e-49 168
Msa0859950 AT1G17010.1 32.526 289 171 5 1 274 50 329 1.62e-46 161
Msa0859950 AT1G17020.1 31.849 292 187 5 3 286 51 338 3.01e-45 157
Msa0859950 AT1G06620.1 33.333 306 180 8 3 295 60 354 1.28e-44 156
Msa0859950 AT5G20400.1 30.640 297 194 6 3 290 43 336 2.64e-44 155
Msa0859950 AT4G25310.1 33.333 273 167 5 22 287 70 334 3.29e-44 155
Msa0859950 AT4G16330.1 40.580 207 113 5 85 288 46 245 4.90e-44 151
Msa0859950 AT4G25300.1 30.928 291 188 5 4 286 51 336 8.09e-44 154
Msa0859950 AT5G08640.2 32.192 292 180 8 6 286 41 325 2.29e-42 149
Msa0859950 AT5G08640.1 32.192 292 180 8 6 286 41 325 2.29e-42 149
Msa0859950 AT1G49390.1 29.758 289 192 5 3 282 43 329 2.49e-42 149
Msa0859950 AT4G21200.1 34.962 266 150 9 6 260 43 296 2.87e-42 149
Msa0859950 AT3G12900.1 31.741 293 173 9 8 287 59 337 3.16e-42 149
Msa0859950 AT2G30830.1 34.686 271 158 7 16 275 68 330 1.04e-41 148
Msa0859950 AT1G78550.2 30.147 272 177 5 34 298 5 270 6.98e-41 144
Msa0859950 AT4G22880.1 30.961 281 180 5 18 288 63 339 1.29e-40 145
Msa0859950 AT4G22880.2 30.961 281 180 5 18 288 63 339 1.29e-40 145
Msa0859950 AT4G22880.3 30.961 281 180 5 18 288 63 339 1.29e-40 145
Msa0859950 AT3G61400.1 33.882 304 176 12 3 292 65 357 4.20e-40 144
Msa0859950 AT5G20550.1 30.576 278 181 5 2 269 42 317 4.67e-40 144
Msa0859950 AT1G04350.1 33.099 284 170 10 6 277 59 334 5.31e-40 144
Msa0859950 AT5G59540.1 32.119 302 181 10 3 290 59 350 5.64e-40 144
Msa0859950 AT3G19010.1 31.973 294 175 6 6 278 29 318 7.03e-40 143
Msa0859950 AT3G19010.4 31.973 294 175 6 6 278 29 318 7.03e-40 143
Msa0859950 AT1G55290.1 29.866 298 181 10 4 288 61 343 9.74e-40 143
Msa0859950 AT1G15550.1 29.195 298 192 7 4 292 56 343 1.06e-39 143
Msa0859950 AT3G21420.1 31.022 274 175 6 6 268 56 326 1.59e-39 142
Msa0859950 AT5G59530.1 32.026 306 177 10 3 290 56 348 1.61e-39 142
Msa0859950 AT1G03410.2 33.677 291 164 12 3 275 55 334 1.75e-39 142
Msa0859950 AT5G05600.2 33.766 231 142 4 4 224 61 290 2.03e-39 140
Msa0859950 AT5G43450.1 30.547 311 192 11 1 299 57 355 2.34e-39 142
Msa0859950 AT1G03410.1 33.562 292 163 13 3 275 92 371 2.93e-39 142
Msa0859950 AT3G13610.1 30.357 280 172 9 23 290 77 345 3.87e-39 141
Msa0859950 AT5G63590.1 32.542 295 179 9 3 286 12 297 1.07e-38 139
Msa0859950 AT5G43440.1 31.348 319 177 11 3 299 60 358 2.48e-38 139
Msa0859950 AT3G19000.1 32.237 304 177 9 6 287 33 329 4.13e-38 139
Msa0859950 AT5G54000.2 30.112 269 177 6 3 262 44 310 6.96e-38 138
Msa0859950 AT2G36690.2 28.797 316 201 7 3 308 59 360 8.04e-38 138
Msa0859950 AT2G36690.1 28.797 316 201 7 3 308 59 360 8.04e-38 138
Msa0859950 AT1G80340.1 29.964 277 181 6 25 292 64 336 1.53e-37 137
Msa0859950 AT1G06650.2 30.303 297 179 10 14 298 76 356 1.84e-37 137
Msa0859950 AT2G30840.1 32.639 288 172 10 16 292 72 348 3.10e-37 136
Msa0859950 AT3G55970.2 31.897 232 147 4 4 224 51 282 8.86e-37 134
Msa0859950 AT3G51240.2 40.884 181 99 4 86 262 42 218 1.81e-36 132
Msa0859950 AT1G49390.2 29.762 252 168 4 38 282 1 250 4.23e-36 131
Msa0859950 AT5G63595.1 32.443 262 149 9 4 260 24 262 4.49e-36 131
Msa0859950 AT1G04380.1 33.223 301 168 11 6 290 46 329 5.03e-36 133
Msa0859950 AT1G06640.1 30.924 249 155 6 14 253 76 316 1.55e-34 129
Msa0859950 AT5G54000.1 31.034 232 151 5 38 262 1 230 4.80e-34 125
Msa0859950 AT1G03400.1 34.836 244 136 9 22 253 67 299 8.51e-34 127
Msa0859950 AT2G25450.1 33.333 267 157 9 16 269 68 326 1.52e-33 127
Msa0859950 AT3G19010.3 30.961 281 167 8 5 278 28 288 2.74e-33 125
Msa0859950 AT1G06645.1 30.345 290 174 11 16 292 91 365 3.58e-33 126
Msa0859950 AT2G30840.3 32.069 290 165 11 16 292 72 342 4.88e-33 125
Msa0859950 AT5G63600.1 30.037 273 175 7 22 287 47 310 7.10e-33 124
Msa0859950 AT4G25310.2 29.670 273 149 5 22 287 70 306 3.22e-32 122
Msa0859950 AT5G63600.2 30.292 274 174 8 22 287 47 311 4.22e-32 122
Msa0859950 AT1G60980.1 28.521 284 172 8 25 289 80 351 6.48e-32 122
Msa0859950 AT3G60290.1 30.068 296 186 10 3 287 50 335 2.13e-31 120
Msa0859950 AT5G07200.1 28.873 284 174 9 25 289 81 355 2.95e-31 121
Msa0859950 AT1G44090.1 29.139 302 194 8 3 289 61 357 4.95e-31 120
Msa0859950 AT1G80330.1 28.428 299 191 8 4 289 48 336 8.05e-31 119
Msa0859950 AT1G50960.1 29.070 258 173 5 3 254 38 291 9.16e-31 119
Msa0859950 AT4G25300.2 34.463 177 111 2 111 287 72 243 1.04e-30 117
Msa0859950 AT5G07480.1 31.734 271 158 10 6 257 45 307 1.45e-30 119
Msa0859950 AT2G44800.1 27.848 316 208 9 4 309 51 356 1.53e-30 118
Msa0859950 AT1G06620.2 32.035 231 139 6 4 224 61 283 2.24e-30 116
Msa0859950 AT3G19000.2 30.522 249 147 8 6 232 33 277 9.06e-30 114
Msa0859950 AT4G21690.1 27.368 285 183 8 25 292 61 338 1.26e-29 116
Msa0859950 AT3G61400.2 33.621 232 136 9 3 224 65 288 2.32e-29 114
Msa0859950 AT1G78440.1 27.273 297 192 9 5 286 15 302 1.19e-28 113
Msa0859950 AT1G03400.2 31.387 274 137 10 20 253 65 327 1.89e-28 113
Msa0859950 AT3G19010.2 30.864 243 143 6 6 227 29 267 2.19e-28 111
Msa0859950 AT4G25420.1 25.902 305 199 8 3 289 59 354 2.82e-28 112
Msa0859950 AT5G43450.2 30.172 232 144 8 1 223 57 279 3.83e-28 110
Msa0859950 AT3G47190.1 30.851 282 154 10 3 260 30 294 3.87e-28 111
Msa0859950 AT5G51810.1 26.974 304 193 9 3 289 61 352 6.54e-28 112
Msa0859950 AT4G23340.1 28.772 285 160 9 28 289 30 294 4.10e-27 108
Msa0859950 AT2G30840.2 31.481 216 132 6 16 223 72 279 9.41e-27 107
Msa0859950 AT1G06650.1 29.224 219 137 7 14 223 76 285 1.58e-26 107
Msa0859950 AT1G06640.2 28.889 225 144 5 14 230 76 292 3.65e-26 106
Msa0859950 AT5G59540.2 30.043 233 145 8 3 224 59 284 8.02e-26 104
Msa0859950 AT5G58660.1 27.931 290 167 11 3 260 32 311 1.45e-25 105
Msa0859950 AT5G12270.1 42.424 132 70 4 163 290 214 343 2.17e-25 104
Msa0859950 AT1G30040.1 28.102 274 181 9 24 286 44 312 2.56e-25 104
Msa0859950 AT1G06640.3 29.302 215 136 5 14 220 76 282 5.19e-25 102
Msa0859950 AT5G43935.1 29.329 283 155 10 28 294 39 292 6.14e-25 102
Msa0859950 AT5G43440.2 29.583 240 133 8 3 223 60 282 9.01e-25 101
Msa0859950 AT3G49620.1 27.682 289 183 8 20 287 59 342 1.73e-24 102
Msa0859950 AT2G34555.1 27.241 290 170 9 20 286 36 307 1.65e-23 99.0
Msa0859950 AT5G51310.1 25.478 314 194 11 1 289 1 299 2.89e-23 98.2
Msa0859950 AT3G50210.4 25.000 296 188 7 20 287 33 322 3.35e-23 98.2
Msa0859950 AT3G50210.1 25.000 296 188 7 20 287 33 322 3.35e-23 98.2
Msa0859950 AT3G50210.3 25.000 296 188 7 20 287 33 322 3.35e-23 98.2
Msa0859950 AT5G63580.2 32.759 232 142 7 1 224 15 240 4.25e-23 96.3
Msa0859950 AT5G63580.1 32.609 230 141 7 1 222 15 238 7.19e-23 95.9
Msa0859950 AT1G04380.2 30.736 231 135 8 6 224 46 263 9.15e-23 95.9
Msa0859950 AT1G02400.1 27.103 321 200 14 4 306 23 327 1.11e-22 96.7
Msa0859950 AT5G07480.2 34.021 194 105 6 74 257 18 198 1.32e-22 94.7
Msa0859950 AT3G49630.1 26.990 289 185 8 20 287 34 317 2.47e-22 95.9
Msa0859950 AT3G49630.3 26.990 289 185 8 20 287 30 313 3.19e-22 95.5
Msa0859950 AT1G47990.1 25.000 316 192 10 4 295 14 308 1.27e-19 88.2
Msa0859950 AT4G23340.2 32.323 198 117 8 115 305 1 188 1.55e-19 85.5
Msa0859950 AT1G14130.1 25.249 301 206 8 5 299 9 296 1.60e-19 87.4
Msa0859950 AT3G49630.2 31.579 190 121 5 102 287 60 244 1.50e-18 84.0
Msa0859950 AT5G58660.2 26.087 253 146 10 3 224 32 274 6.64e-18 82.4
Msa0859950 AT3G46500.5 25.436 287 187 10 21 287 30 309 3.00e-17 81.3
Msa0859950 AT3G50210.2 28.497 193 129 4 102 287 50 240 1.06e-16 78.6
Msa0859950 AT1G14120.2 25.692 253 172 6 5 251 8 250 1.50e-16 79.3
Msa0859950 AT1G14120.1 25.692 253 172 6 5 251 8 250 1.50e-16 79.3
Msa0859950 AT1G14120.3 25.692 253 172 6 5 251 8 250 1.50e-16 79.3
Msa0859950 AT1G52820.1 24.653 288 179 8 21 290 32 299 1.57e-16 79.3
Msa0859950 AT5G51810.2 26.446 242 152 8 3 227 61 293 3.27e-16 78.2
Msa0859950 AT1G35190.1 26.333 300 175 11 2 264 1 291 1.55e-15 76.6
Msa0859950 AT3G46500.7 25.197 254 166 9 21 254 30 279 6.62e-14 71.6
Msa0859950 AT4G22870.1 34.375 96 59 2 193 287 2 94 7.31e-14 67.4
Msa0859950 AT4G16765.3 28.108 185 109 8 110 283 58 229 9.08e-13 67.4
Msa0859950 AT4G16765.6 27.749 191 115 8 110 288 58 237 1.02e-12 67.4
Msa0859950 AT4G16765.1 27.749 191 115 8 110 288 58 237 1.02e-12 67.4
Msa0859950 AT4G16765.2 27.749 191 115 8 110 288 58 237 1.02e-12 67.4
Msa0859950 AT4G03070.1 29.944 177 115 5 118 290 133 304 1.30e-12 67.8
Msa0859950 AT3G46480.1 34.783 138 72 7 174 300 156 286 2.72e-11 63.5

Find 98 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCTTCAAACACAAATTT+TGG 0.052810 5_4:+58438588 None:intergenic
GAAAGAATCAAATGTTAATT+TGG 0.112620 5_4:-58438508 Msa0859950:CDS
AATTAACATTTGATTCTTTC+AGG 0.123673 5_4:+58438511 None:intergenic
AAATGAAAATAATAATAATT+AGG 0.156400 5_4:-58438415 Msa0859950:three_prime_UTR
AGTTTCTCCAAGCTAATAAT+TGG 0.192763 5_4:+58440226 None:intergenic
CCCTTCACCAGCTCTGGATT+TGG 0.233913 5_4:+58439465 None:intergenic
ATCTCTGAAATGTTTGATTC+AGG 0.255183 5_4:+58439842 None:intergenic
GAAACTAGCAGAAGAGCTTT+TGG 0.259764 5_4:-58439595 Msa0859950:CDS
TTTCATTAAACAATTACTAT+TGG 0.275044 5_4:+58438483 None:intergenic
ATGCATGGAGCATAGGTTTA+AGG 0.281531 5_4:-58439951 Msa0859950:CDS
TCTTTCAGGGCTTCAAATCT+TGG 0.295919 5_4:+58438525 None:intergenic
TAAGGATGCTTGTGAGAATT+GGG 0.296497 5_4:-58440167 Msa0859950:CDS
AGAGAAAGGTTACCTTAAAA+AGG 0.302113 5_4:-58439547 Msa0859950:CDS
TGGTATACCCCATGACCTTA+TGG 0.305963 5_4:-58440011 Msa0859950:CDS
CGGAATCATCCTTCTCTTCC+AGG 0.306054 5_4:-58439418 Msa0859950:CDS
TTAAGGATGCTTGTGAGAAT+TGG 0.311709 5_4:-58440168 Msa0859950:CDS
CCTTCACCAGCTCTGGATTT+GGG 0.325710 5_4:+58439466 None:intergenic
GGATCAAGAGGGCCAACTTT+TGG 0.342144 5_4:-58439516 Msa0859950:CDS
GCATTTCCTATAGTGCTCTT+TGG 0.346722 5_4:+58439970 None:intergenic
CCAAACTGAGGTCAAAGATA+TGG 0.350187 5_4:-58439897 Msa0859950:CDS
AATGAAAATAATAATAATTA+GGG 0.352059 5_4:-58438414 Msa0859950:three_prime_UTR
CCATATCTTTGACCTCAGTT+TGG 0.352945 5_4:+58439897 None:intergenic
CAACAATAGAGTGGCGCATT+GGG 0.358833 5_4:+58439340 None:intergenic
AAAGAATCAAATGTTAATTT+GGG 0.360868 5_4:-58438507 Msa0859950:CDS
AGACACCATGGAGAAAATTA+AGG 0.373733 5_4:-58440185 Msa0859950:CDS
TAAATAAGTAAAATAAATAT+AGG 0.395570 5_4:-58438458 Msa0859950:three_prime_UTR
TTGACAACTTTGTAACTTGT+AGG 0.401177 5_4:-58438241 Msa0859950:three_prime_UTR
TGAGAATTGGGGATTCTTTG+AGG 0.409466 5_4:-58440155 Msa0859950:intron
CGAAGACCCTTCACCAGCTC+TGG 0.409771 5_4:+58439459 None:intergenic
ATTTGGGCATTGAGGGTAGT+TGG 0.418782 5_4:+58439482 None:intergenic
GAATTTCCCAATTATTAGCT+TGG 0.421006 5_4:-58440233 Msa0859950:CDS
GGTTGACCAAAGAGCACTAT+AGG 0.423088 5_4:-58439976 Msa0859950:CDS
TTGAGGGTAGTTGGCTACTT+TGG 0.423692 5_4:+58439491 None:intergenic
TGCTTTGAAATTTCATGCTA+AGG 0.438558 5_4:-58438550 Msa0859950:CDS
GGCCATCTTTGAGCAATTGT+AGG 0.439962 5_4:+58439379 None:intergenic
GCTACTTTGGTGCCAAAAGT+TGG 0.440779 5_4:+58439504 None:intergenic
GTTTCTCCAAGCTAATAATT+GGG 0.441883 5_4:+58440227 None:intergenic
CTGAGGTCAAAGATATGGAT+TGG 0.449050 5_4:-58439892 Msa0859950:CDS
GGCCACTGACCTTGTCATCC+TGG 0.449783 5_4:+58439400 None:intergenic
GATTTGTTATGTGAGAATCT+TGG 0.452104 5_4:-58439573 Msa0859950:CDS
ATTAACATTTGATTCTTTCA+GGG 0.452549 5_4:+58438512 None:intergenic
GCTCTGGATTTGGGCATTGA+GGG 0.456238 5_4:+58439475 None:intergenic
TCTCTGAAATGTTTGATTCA+GGG 0.461275 5_4:+58439843 None:intergenic
CTTCGTGCTCACACCGATGC+CGG 0.463422 5_4:-58439441 Msa0859950:CDS
ACTATATTTATCATATATGT+TGG 0.464707 5_4:+58438082 None:intergenic
TACAAACAGGTAATAACAAA+TGG 0.471726 5_4:-58438762 Msa0859950:intron
ACCTCTCCAATGTGTCCATA+AGG 0.477763 5_4:+58439996 None:intergenic
AGCTCTGGATTTGGGCATTG+AGG 0.479340 5_4:+58439474 None:intergenic
CTGATCTCAGTGATGAATAC+AGG 0.479662 5_4:-58439817 Msa0859950:intron
CACTCTATTGTTGTCAACCT+TGG 0.486458 5_4:-58439330 Msa0859950:CDS
TTACCCTGCTCCAGAACTGT+TGG 0.490800 5_4:-58438643 Msa0859950:CDS
CGTGTGATAGCACAAACAAA+TGG 0.493222 5_4:-58438717 Msa0859950:CDS
TGAGGTCAAAGATATGGATT+GGG 0.504452 5_4:-58439891 Msa0859950:CDS
CCAATGTGTCCATAAGGTCA+TGG 0.507048 5_4:+58440002 None:intergenic
ATTAGCTTGGAGAAACTCAA+TGG 0.508564 5_4:-58440220 Msa0859950:CDS
GAAACAAATTTACCTCAAGT+TGG 0.510428 5_4:+58439304 None:intergenic
CAATGTGTCCATAAGGTCAT+GGG 0.512658 5_4:+58440003 None:intergenic
ACAACAATAGAGTGGCGCAT+TGG 0.513038 5_4:+58439339 None:intergenic
AAGGATGCTTGTGAGAATTG+GGG 0.513241 5_4:-58440166 Msa0859950:CDS
CTGTATTCATCACTGAGATC+AGG 0.514220 5_4:+58439818 None:intergenic
AAACTCTAGCTGGTGAATCA+TGG 0.516202 5_4:-58440031 Msa0859950:intron
GGCCTACAATTGCTCAAAGA+TGG 0.522007 5_4:-58439381 Msa0859950:CDS
TATGTACAGGAAAGTGATGA+AGG 0.531490 5_4:-58439637 Msa0859950:intron
ATAGCATCATTCTACAACCC+TGG 0.534295 5_4:-58438681 Msa0859950:CDS
AAGGATGATTCCGCCGGCAT+CGG 0.534364 5_4:+58439428 None:intergenic
CATTTGTTTGTGCTATCACA+CGG 0.538854 5_4:+58438718 None:intergenic
CCTTGTCATCCTGGAAGAGA+AGG 0.539084 5_4:+58439409 None:intergenic
TAAATGACAGCATCACTCCC+AGG 0.539894 5_4:+58438663 None:intergenic
CCCAAATCCAGAGCTGGTGA+AGG 0.554109 5_4:-58439466 Msa0859950:CDS
ATTCAGGGAGGTGACGAACA+TGG 0.554465 5_4:+58439858 None:intergenic
ATAGGAAATGCATGGAGCAT+AGG 0.560098 5_4:-58439958 Msa0859950:CDS
GAGAATCTTGGACTAGAGAA+AGG 0.561460 5_4:-58439561 Msa0859950:CDS
CCTTCTCTTCCAGGATGACA+AGG 0.569878 5_4:-58439409 Msa0859950:CDS
CCATGACCTTATGGACACAT+TGG 0.572011 5_4:-58440002 Msa0859950:CDS
GAAGAGAAGGATGATTCCGC+CGG 0.574268 5_4:+58439422 None:intergenic
AACAATAGAGTGGCGCATTG+GGG 0.574691 5_4:+58439341 None:intergenic
TAGCATCATTCTACAACCCT+GGG 0.578286 5_4:-58438680 Msa0859950:CDS
AGGGTTGTAGAATGATGCTA+TGG 0.587289 5_4:+58438683 None:intergenic
TTTCCAACAGTTCTGGAGCA+GGG 0.587837 5_4:+58438640 None:intergenic
TCAATGCCCAAATCCAGAGC+TGG 0.593557 5_4:-58439472 Msa0859950:CDS
CAACCTTGGTGACCAACTTG+AGG 0.598103 5_4:-58439316 Msa0859950:intron
AAGGAAGTAATATCAAGCAA+AGG 0.598298 5_4:-58439932 Msa0859950:CDS
TTCCAGGATGACAAGGTCAG+TGG 0.605660 5_4:-58439402 Msa0859950:CDS
CGTGCTCACACCGATGCCGG+CGG 0.608337 5_4:-58439438 Msa0859950:CDS
AGGGAGGTGACGAACATGGA+AGG 0.611334 5_4:+58439862 None:intergenic
AAATGACAGCATCACTCCCA+GGG 0.625659 5_4:+58438664 None:intergenic
CCAAATCCAGAGCTGGTGAA+GGG 0.626529 5_4:-58439465 Msa0859950:CDS
TTACCTCAAGTTGGTCACCA+AGG 0.629532 5_4:+58439313 None:intergenic
AGAGCACTATAGGAAATGCA+TGG 0.631438 5_4:-58439966 Msa0859950:CDS
AAATGGCAAGTACAAGAGTG+TGG 0.640556 5_4:-58438745 Msa0859950:CDS
ACAATAGAGTGGCGCATTGG+GGG 0.650237 5_4:+58439342 None:intergenic
AATTGCTCAAAGATGGCCAG+TGG 0.660439 5_4:-58439374 Msa0859950:CDS
CAAGGTTGACAACAATAGAG+TGG 0.673016 5_4:+58439331 None:intergenic
CTTAGATGCTGTCCAAACTG+AGG 0.673374 5_4:-58439909 Msa0859950:CDS
CTGAAATGTTTGATTCAGGG+AGG 0.675587 5_4:+58439846 None:intergenic
ACCTTATGGACACATTGGAG+AGG 0.684850 5_4:-58439997 Msa0859950:CDS
AATGTGTCCATAAGGTCATG+GGG 0.688791 5_4:+58440004 None:intergenic
TGTTGAGAGAAAAGACACCA+TGG 0.692596 5_4:-58440197 Msa0859950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAAATTTTGATTATATTGA+CGG - chr5_4:58439249-58439268 Msa0859950:intron 15.0%
!!! ATATTAGTGTCTAATATTTT+TGG + chr5_4:58439500-58439519 None:intergenic 15.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_4:58439871-58439890 Msa0859950:CDS 15.0%
!! TTTCATTAAACAATTACTAT+TGG + chr5_4:58439898-58439917 None:intergenic 15.0%
!!! AAAAAAAACTCAAATTTTGT+AGG - chr5_4:58440062-58440081 Msa0859950:intron 15.0%
!!! CTTTGTAAACTTTTTTTTTA+CGG - chr5_4:58440113-58440132 Msa0859950:intron 15.0%
!!! TTTGTAAACTTTTTTTTTAC+GGG - chr5_4:58440114-58440133 Msa0859950:intron 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_4:58440299-58440318 None:intergenic 15.0%
!!! CTAAATTTTGATTATATTGA+CGG - chr5_4:58439249-58439268 Msa0859950:intron 15.0%
!!! ATATTAGTGTCTAATATTTT+TGG + chr5_4:58439500-58439519 None:intergenic 15.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_4:58439871-58439890 Msa0859950:CDS 15.0%
!! TTTCATTAAACAATTACTAT+TGG + chr5_4:58439898-58439917 None:intergenic 15.0%
!!! AAAAAAAACTCAAATTTTGT+AGG - chr5_4:58440062-58440081 Msa0859950:intron 15.0%
!!! CTTTGTAAACTTTTTTTTTA+CGG - chr5_4:58440113-58440132 Msa0859950:intron 15.0%
!!! TTTGTAAACTTTTTTTTTAC+GGG - chr5_4:58440114-58440133 Msa0859950:intron 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_4:58440299-58440318 None:intergenic 15.0%
!!! ATGTGTTAATTTTTTTTTGC+AGG + chr5_4:58439302-58439321 None:intergenic 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_4:58439341-58439360 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_4:58439513-58439532 Msa0859950:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_4:58439869-58439888 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_4:58439870-58439889 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_4:58439870-58439889 Msa0859950:CDS 20.0%
!!! ATGTGTTAATTTTTTTTTGC+AGG + chr5_4:58439302-58439321 None:intergenic 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_4:58439341-58439360 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_4:58439513-58439532 Msa0859950:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_4:58439869-58439888 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_4:58439870-58439889 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_4:58439870-58439889 Msa0859950:CDS 20.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_4:58438297-58438316 Msa0859950:three_prime_UTR 25.0%
!!! TCATGATTCTGAATTTGTTA+TGG - chr5_4:58438712-58438731 Msa0859950:CDS 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_4:58438841-58438860 Msa0859950:intron 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_4:58438846-58438865 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_4:58439192-58439211 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_4:58439332-58439351 Msa0859950:CDS 25.0%
!!! CTAATATTTTTGGTCACATT+AGG + chr5_4:58439490-58439509 None:intergenic 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_4:58439616-58439635 Msa0859950:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_4:58439792-58439811 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_4:58439793-58439812 None:intergenic 25.0%
!! TTTTTCTTTATGCATGTTAG+AGG + chr5_4:58438066-58438085 None:intergenic 25.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_4:58438297-58438316 Msa0859950:three_prime_UTR 25.0%
!!! TCATGATTCTGAATTTGTTA+TGG - chr5_4:58438712-58438731 Msa0859950:CDS 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_4:58438841-58438860 Msa0859950:intron 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_4:58438846-58438865 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_4:58439192-58439211 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_4:58439332-58439351 Msa0859950:CDS 25.0%
!!! CTAATATTTTTGGTCACATT+AGG + chr5_4:58439490-58439509 None:intergenic 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_4:58439616-58439635 Msa0859950:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_4:58439792-58439811 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_4:58439793-58439812 None:intergenic 25.0%
GAATTTCCCAATTATTAGCT+TGG - chr5_4:58438145-58438164 Msa0859950:three_prime_UTR 30.0%
GTTTCTCCAAGCTAATAATT+GGG + chr5_4:58438154-58438173 None:intergenic 30.0%
AGTTTCTCCAAGCTAATAAT+TGG + chr5_4:58438155-58438174 None:intergenic 30.0%
! TTTGATTTCAAAACTCTAGC+TGG - chr5_4:58438337-58438356 Msa0859950:three_prime_UTR 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_4:58438446-58438465 Msa0859950:three_prime_UTR 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_4:58438538-58438557 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_4:58438539-58438558 None:intergenic 30.0%
GTTATGGTAATTGTATGTAC+AGG - chr5_4:58438728-58438747 Msa0859950:CDS 30.0%
! TGATGAAGGAATTTTCTTTG+AGG - chr5_4:58438755-58438774 Msa0859950:CDS 30.0%
!! GATTTGTTATGTGAGAATCT+TGG - chr5_4:58438805-58438824 Msa0859950:intron 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_4:58438831-58438850 Msa0859950:intron 30.0%
GAAACAAATTTACCTCAAGT+TGG + chr5_4:58439077-58439096 None:intergenic 30.0%
TTTGATGAATTGAGATCAGA+CGG + chr5_4:58439401-58439420 None:intergenic 30.0%
TCTCAATTCATCAAAATACG+TGG - chr5_4:58439406-58439425 Msa0859950:CDS 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_4:58439432-58439451 Msa0859950:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_4:58439460-58439479 None:intergenic 30.0%
TGAAAAATCATCTAAGGAGA+CGG - chr5_4:58439519-58439538 Msa0859950:CDS 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_4:58439570-58439589 Msa0859950:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_4:58439603-58439622 Msa0859950:CDS 30.0%
!! TGCTTTGAAATTTCATGCTA+AGG - chr5_4:58439828-58439847 Msa0859950:CDS 30.0%
! TTGACAACTTTGTAACTTGT+AGG - chr5_4:58440137-58440156 Msa0859950:intron 30.0%
GAATTTCCCAATTATTAGCT+TGG - chr5_4:58438145-58438164 Msa0859950:three_prime_UTR 30.0%
GTTTCTCCAAGCTAATAATT+GGG + chr5_4:58438154-58438173 None:intergenic 30.0%
AGTTTCTCCAAGCTAATAAT+TGG + chr5_4:58438155-58438174 None:intergenic 30.0%
! TTTGATTTCAAAACTCTAGC+TGG - chr5_4:58438337-58438356 Msa0859950:three_prime_UTR 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_4:58438446-58438465 Msa0859950:three_prime_UTR 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_4:58438538-58438557 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_4:58438539-58438558 None:intergenic 30.0%
GTTATGGTAATTGTATGTAC+AGG - chr5_4:58438728-58438747 Msa0859950:CDS 30.0%
! TGATGAAGGAATTTTCTTTG+AGG - chr5_4:58438755-58438774 Msa0859950:CDS 30.0%
!! GATTTGTTATGTGAGAATCT+TGG - chr5_4:58438805-58438824 Msa0859950:intron 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_4:58438831-58438850 Msa0859950:intron 30.0%
GAAACAAATTTACCTCAAGT+TGG + chr5_4:58439077-58439096 None:intergenic 30.0%
TTTGATGAATTGAGATCAGA+CGG + chr5_4:58439401-58439420 None:intergenic 30.0%
TCTCAATTCATCAAAATACG+TGG - chr5_4:58439406-58439425 Msa0859950:CDS 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_4:58439432-58439451 Msa0859950:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_4:58439460-58439479 None:intergenic 30.0%
TGAAAAATCATCTAAGGAGA+CGG - chr5_4:58439519-58439538 Msa0859950:CDS 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_4:58439570-58439589 Msa0859950:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_4:58439603-58439622 Msa0859950:CDS 30.0%
!! TGCTTTGAAATTTCATGCTA+AGG - chr5_4:58439828-58439847 Msa0859950:CDS 30.0%
! TTGACAACTTTGTAACTTGT+AGG - chr5_4:58440137-58440156 Msa0859950:intron 30.0%
! ATTAGCTTGGAGAAACTCAA+TGG - chr5_4:58438158-58438177 Msa0859950:three_prime_UTR 35.0%
AGACACCATGGAGAAAATTA+AGG - chr5_4:58438193-58438212 Msa0859950:three_prime_UTR 35.0%
! AGCATCCTTAATTTTCTCCA+TGG + chr5_4:58438201-58438220 None:intergenic 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_4:58438210-58438229 Msa0859950:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_4:58438211-58438230 Msa0859950:three_prime_UTR 35.0%
TGAGGTCAAAGATATGGATT+GGG - chr5_4:58438487-58438506 Msa0859950:exon 35.0%
TATGTACAGGAAAGTGATGA+AGG - chr5_4:58438741-58438760 Msa0859950:CDS 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_4:58438850-58438869 Msa0859950:intron 35.0%
! AGGCATTTTATGGATCAAGA+GGG - chr5_4:58438851-58438870 Msa0859950:intron 35.0%
! AATGAGAGTTGACTTAGCAA+AGG + chr5_4:58439099-58439118 None:intergenic 35.0%
TCCATATTAGTCCTTCAATC+TGG - chr5_4:58439144-58439163 Msa0859950:intron 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_4:58439210-58439229 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_4:58439211-58439230 None:intergenic 35.0%
TTACACTTTAGTCACGTTAG+AGG - chr5_4:58439224-58439243 Msa0859950:intron 35.0%
CATTTGTTTGTGCTATCACA+CGG + chr5_4:58439663-58439682 None:intergenic 35.0%
! ATTAGCTTGGAGAAACTCAA+TGG - chr5_4:58438158-58438177 Msa0859950:three_prime_UTR 35.0%
AGACACCATGGAGAAAATTA+AGG - chr5_4:58438193-58438212 Msa0859950:three_prime_UTR 35.0%
! AGCATCCTTAATTTTCTCCA+TGG + chr5_4:58438201-58438220 None:intergenic 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_4:58438210-58438229 Msa0859950:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_4:58438211-58438230 Msa0859950:three_prime_UTR 35.0%
TGAGGTCAAAGATATGGATT+GGG - chr5_4:58438487-58438506 Msa0859950:exon 35.0%
TATGTACAGGAAAGTGATGA+AGG - chr5_4:58438741-58438760 Msa0859950:CDS 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_4:58438850-58438869 Msa0859950:intron 35.0%
! AGGCATTTTATGGATCAAGA+GGG - chr5_4:58438851-58438870 Msa0859950:intron 35.0%
! AATGAGAGTTGACTTAGCAA+AGG + chr5_4:58439099-58439118 None:intergenic 35.0%
TCCATATTAGTCCTTCAATC+TGG - chr5_4:58439144-58439163 Msa0859950:intron 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_4:58439210-58439229 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_4:58439211-58439230 None:intergenic 35.0%
TTACACTTTAGTCACGTTAG+AGG - chr5_4:58439224-58439243 Msa0859950:intron 35.0%
CATTTGTTTGTGCTATCACA+CGG + chr5_4:58439663-58439682 None:intergenic 35.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_4:58438181-58438200 Msa0859950:three_prime_UTR 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_4:58438212-58438231 Msa0859950:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_4:58438223-58438242 Msa0859950:three_prime_UTR 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_4:58438347-58438366 Msa0859950:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_4:58438377-58438396 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_4:58438378-58438397 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_4:58438411-58438430 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_4:58438412-58438431 Msa0859950:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_4:58438420-58438439 Msa0859950:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_4:58438427-58438446 Msa0859950:three_prime_UTR 40.0%
CCATATCTTTGACCTCAGTT+TGG + chr5_4:58438484-58438503 None:intergenic 40.0%
CCAAACTGAGGTCAAAGATA+TGG - chr5_4:58438481-58438500 Msa0859950:exon 40.0%
CTGAGGTCAAAGATATGGAT+TGG - chr5_4:58438486-58438505 Msa0859950:exon 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_4:58438535-58438554 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_4:58438563-58438582 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_4:58438561-58438580 Msa0859950:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_4:58438783-58438802 Msa0859950:intron 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_4:58438817-58438836 Msa0859950:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_4:58439050-58439069 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_4:58439048-58439067 Msa0859950:intron 40.0%
GCCAGATTGAAGGACTAATA+TGG + chr5_4:58439148-58439167 None:intergenic 40.0%
! TTCAATCTGGCTCCTCTAAA+GGG - chr5_4:58439157-58439176 Msa0859950:intron 40.0%
!! TGGTTTGTTGTTCCCTTTAG+AGG + chr5_4:58439172-58439191 None:intergenic 40.0%
!!! TTTTTTGCAGGCTACGACAT+GGG + chr5_4:58439290-58439309 None:intergenic 40.0%
!!! TTTTTTTGCAGGCTACGACA+TGG + chr5_4:58439291-58439310 None:intergenic 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_4:58439633-58439652 Msa0859950:intron 40.0%
CGTGTGATAGCACAAACAAA+TGG - chr5_4:58439661-58439680 Msa0859950:intron 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_4:58439698-58439717 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_4:58439697-58439716 Msa0859950:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_4:58439698-58439717 Msa0859950:intron 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_4:58439856-58439875 None:intergenic 40.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_4:58438181-58438200 Msa0859950:three_prime_UTR 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_4:58438212-58438231 Msa0859950:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_4:58438223-58438242 Msa0859950:three_prime_UTR 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_4:58438347-58438366 Msa0859950:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_4:58438377-58438396 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_4:58438378-58438397 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_4:58438411-58438430 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_4:58438412-58438431 Msa0859950:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_4:58438420-58438439 Msa0859950:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_4:58438427-58438446 Msa0859950:three_prime_UTR 40.0%
CCATATCTTTGACCTCAGTT+TGG + chr5_4:58438484-58438503 None:intergenic 40.0%
CCAAACTGAGGTCAAAGATA+TGG - chr5_4:58438481-58438500 Msa0859950:exon 40.0%
CTGAGGTCAAAGATATGGAT+TGG - chr5_4:58438486-58438505 Msa0859950:exon 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_4:58438535-58438554 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_4:58438563-58438582 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_4:58438561-58438580 Msa0859950:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_4:58438783-58438802 Msa0859950:intron 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_4:58438817-58438836 Msa0859950:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_4:58439050-58439069 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_4:58439048-58439067 Msa0859950:intron 40.0%
GCCAGATTGAAGGACTAATA+TGG + chr5_4:58439148-58439167 None:intergenic 40.0%
! TTCAATCTGGCTCCTCTAAA+GGG - chr5_4:58439157-58439176 Msa0859950:intron 40.0%
!! TGGTTTGTTGTTCCCTTTAG+AGG + chr5_4:58439172-58439191 None:intergenic 40.0%
!!! TTTTTTGCAGGCTACGACAT+GGG + chr5_4:58439290-58439309 None:intergenic 40.0%
!!! TTTTTTTGCAGGCTACGACA+TGG + chr5_4:58439291-58439310 None:intergenic 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_4:58439633-58439652 Msa0859950:intron 40.0%
CGTGTGATAGCACAAACAAA+TGG - chr5_4:58439661-58439680 Msa0859950:intron 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_4:58439698-58439717 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_4:58439697-58439716 Msa0859950:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_4:58439698-58439717 Msa0859950:intron 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_4:58439856-58439875 None:intergenic 40.0%
TGGTATACCCCATGACCTTA+TGG - chr5_4:58438367-58438386 Msa0859950:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_4:58438379-58438398 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_4:58438376-58438395 Msa0859950:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_4:58438381-58438400 Msa0859950:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_4:58438385-58438404 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_4:58438402-58438421 Msa0859950:three_prime_UTR 45.0%
CTTAGATGCTGTCCAAACTG+AGG - chr5_4:58438469-58438488 Msa0859950:exon 45.0%
!! GCTACTTTGGTGCCAAAAGT+TGG + chr5_4:58438877-58438896 None:intergenic 45.0%
TTGAGGGTAGTTGGCTACTT+TGG + chr5_4:58438890-58438909 None:intergenic 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_4:58438899-58438918 None:intergenic 45.0%
GGCCTACAATTGCTCAAAGA+TGG - chr5_4:58438997-58439016 Msa0859950:intron 45.0%
GGCCATCTTTGAGCAATTGT+AGG + chr5_4:58439002-58439021 None:intergenic 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_4:58439004-58439023 Msa0859950:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_4:58439040-58439059 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_4:58439041-58439060 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_4:58439042-58439061 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_4:58439068-58439087 None:intergenic 45.0%
! CTTTAGAGGAGCCAGATTGA+AGG + chr5_4:58439158-58439177 None:intergenic 45.0%
! CTTCAATCTGGCTCCTCTAA+AGG - chr5_4:58439156-58439175 Msa0859950:intron 45.0%
! TTTTTGCAGGCTACGACATG+GGG + chr5_4:58439289-58439308 None:intergenic 45.0%
AAATGACAGCATCACTCCCA+GGG + chr5_4:58439717-58439736 None:intergenic 45.0%
TAAATGACAGCATCACTCCC+AGG + chr5_4:58439718-58439737 None:intergenic 45.0%
!! TTTCCAACAGTTCTGGAGCA+GGG + chr5_4:58439741-58439760 None:intergenic 45.0%
!!! TTTTCCAACAGTTCTGGAGC+AGG + chr5_4:58439742-58439761 None:intergenic 45.0%
! GCGTGTTTTTCCAACAGTTC+TGG + chr5_4:58439748-58439767 None:intergenic 45.0%
ACTGTTGGAAAAACACGCAG+AGG - chr5_4:58439750-58439769 Msa0859950:intron 45.0%
TGGTATACCCCATGACCTTA+TGG - chr5_4:58438367-58438386 Msa0859950:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_4:58438379-58438398 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_4:58438376-58438395 Msa0859950:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_4:58438381-58438400 Msa0859950:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_4:58438385-58438404 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_4:58438402-58438421 Msa0859950:three_prime_UTR 45.0%
CTTAGATGCTGTCCAAACTG+AGG - chr5_4:58438469-58438488 Msa0859950:exon 45.0%
!! GCTACTTTGGTGCCAAAAGT+TGG + chr5_4:58438877-58438896 None:intergenic 45.0%
TTGAGGGTAGTTGGCTACTT+TGG + chr5_4:58438890-58438909 None:intergenic 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_4:58438899-58438918 None:intergenic 45.0%
GGCCTACAATTGCTCAAAGA+TGG - chr5_4:58438997-58439016 Msa0859950:intron 45.0%
GGCCATCTTTGAGCAATTGT+AGG + chr5_4:58439002-58439021 None:intergenic 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_4:58439004-58439023 Msa0859950:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_4:58439040-58439059 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_4:58439041-58439060 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_4:58439042-58439061 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_4:58439068-58439087 None:intergenic 45.0%
! CTTTAGAGGAGCCAGATTGA+AGG + chr5_4:58439158-58439177 None:intergenic 45.0%
! CTTCAATCTGGCTCCTCTAA+AGG - chr5_4:58439156-58439175 Msa0859950:intron 45.0%
! TTTTTGCAGGCTACGACATG+GGG + chr5_4:58439289-58439308 None:intergenic 45.0%
AAATGACAGCATCACTCCCA+GGG + chr5_4:58439717-58439736 None:intergenic 45.0%
TAAATGACAGCATCACTCCC+AGG + chr5_4:58439718-58439737 None:intergenic 45.0%
!! TTTCCAACAGTTCTGGAGCA+GGG + chr5_4:58439741-58439760 None:intergenic 45.0%
!!! TTTTCCAACAGTTCTGGAGC+AGG + chr5_4:58439742-58439761 None:intergenic 45.0%
! GCGTGTTTTTCCAACAGTTC+TGG + chr5_4:58439748-58439767 None:intergenic 45.0%
ACTGTTGGAAAAACACGCAG+AGG - chr5_4:58439750-58439769 Msa0859950:intron 45.0%
!! TAAATAAGTAAAATAAATAT+AGG - chr5_4:58439920-58439939 Msa0859950:CDS 5.0%
!! AAATGAAAATAATAATAATT+AGG - chr5_4:58439963-58439982 Msa0859950:CDS 5.0%
!! AATGAAAATAATAATAATTA+GGG - chr5_4:58439964-58439983 Msa0859950:CDS 5.0%
!! TAAATAAGTAAAATAAATAT+AGG - chr5_4:58439920-58439939 Msa0859950:CDS 5.0%
!! AAATGAAAATAATAATAATT+AGG - chr5_4:58439963-58439982 Msa0859950:CDS 5.0%
!! AATGAAAATAATAATAATTA+GGG - chr5_4:58439964-58439983 Msa0859950:CDS 5.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_4:58438523-58438542 None:intergenic 50.0%
! GGATCAAGAGGGCCAACTTT+TGG - chr5_4:58438862-58438881 Msa0859950:intron 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_4:58438906-58438925 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_4:58438907-58438926 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_4:58438906-58438925 Msa0859950:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_4:58438915-58438934 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_4:58438913-58438932 Msa0859950:intron 50.0%
GAAGAGAAGGATGATTCCGC+CGG + chr5_4:58438959-58438978 None:intergenic 50.0%
CGGAATCATCCTTCTCTTCC+AGG - chr5_4:58438960-58438979 Msa0859950:intron 50.0%
CCTTGTCATCCTGGAAGAGA+AGG + chr5_4:58438972-58438991 None:intergenic 50.0%
CCTTCTCTTCCAGGATGACA+AGG - chr5_4:58438969-58438988 Msa0859950:intron 50.0%
TTCCAGGATGACAAGGTCAG+TGG - chr5_4:58438976-58438995 Msa0859950:intron 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_4:58439023-58439042 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_4:58439039-58439058 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_4:58439062-58439081 Msa0859950:intron 50.0%
TTACCCTGCTCCAGAACTGT+TGG - chr5_4:58439735-58439754 Msa0859950:intron 50.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_4:58438523-58438542 None:intergenic 50.0%
! GGATCAAGAGGGCCAACTTT+TGG - chr5_4:58438862-58438881 Msa0859950:intron 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_4:58438906-58438925 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_4:58438907-58438926 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_4:58438906-58438925 Msa0859950:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_4:58438915-58438934 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_4:58438913-58438932 Msa0859950:intron 50.0%
GAAGAGAAGGATGATTCCGC+CGG + chr5_4:58438959-58438978 None:intergenic 50.0%
CGGAATCATCCTTCTCTTCC+AGG - chr5_4:58438960-58438979 Msa0859950:intron 50.0%
CCTTGTCATCCTGGAAGAGA+AGG + chr5_4:58438972-58438991 None:intergenic 50.0%
CCTTCTCTTCCAGGATGACA+AGG - chr5_4:58438969-58438988 Msa0859950:intron 50.0%
TTCCAGGATGACAAGGTCAG+TGG - chr5_4:58438976-58438995 Msa0859950:intron 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_4:58439023-58439042 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_4:58439039-58439058 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_4:58439062-58439081 Msa0859950:intron 50.0%
TTACCCTGCTCCAGAACTGT+TGG - chr5_4:58439735-58439754 Msa0859950:intron 50.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_4:58438519-58438538 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_4:58438912-58438931 Msa0859950:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_4:58438916-58438935 None:intergenic 55.0%
AAGGATGATTCCGCCGGCAT+CGG + chr5_4:58438953-58438972 None:intergenic 55.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_4:58438519-58438538 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_4:58438912-58438931 Msa0859950:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_4:58438916-58438935 None:intergenic 55.0%
AAGGATGATTCCGCCGGCAT+CGG + chr5_4:58438953-58438972 None:intergenic 55.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_4:58438922-58438941 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_4:58438937-58438956 Msa0859950:intron 60.0%
GGCCACTGACCTTGTCATCC+TGG + chr5_4:58438981-58439000 None:intergenic 60.0%
TTGCAGGCTACGACATGGGG+AGG + chr5_4:58439286-58439305 None:intergenic 60.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_4:58438922-58438941 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_4:58438937-58438956 Msa0859950:intron 60.0%
GGCCACTGACCTTGTCATCC+TGG + chr5_4:58438981-58439000 None:intergenic 60.0%
TTGCAGGCTACGACATGGGG+AGG + chr5_4:58439286-58439305 None:intergenic 60.0%
CAGGCTACGACATGGGGAGG+AGG + chr5_4:58439283-58439302 None:intergenic 65.0%
CAGGCTACGACATGGGGAGG+AGG + chr5_4:58439283-58439302 None:intergenic 65.0%
CGTGCTCACACCGATGCCGG+CGG - chr5_4:58438940-58438959 Msa0859950:intron 70.0%
CGTGCTCACACCGATGCCGG+CGG - chr5_4:58438940-58438959 Msa0859950:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 58438064 58440336 58438064 ID=Msa0859950;Name=Msa0859950
chr5_4 mRNA 58438064 58440336 58438064 ID=Msa0859950-mRNA-1;Parent=Msa0859950;Name=Msa0859950-mRNA-1;_AED=0.15;_eAED=0.15;_QI=73|1|1|1|1|1|4|424|318
chr5_4 exon 58438064 58438775 58438064 ID=Msa0859950-mRNA-1:exon:17807;Parent=Msa0859950-mRNA-1
chr5_4 exon 58439317 58439650 58439317 ID=Msa0859950-mRNA-1:exon:17806;Parent=Msa0859950-mRNA-1
chr5_4 exon 58439818 58440044 58439818 ID=Msa0859950-mRNA-1:exon:17805;Parent=Msa0859950-mRNA-1
chr5_4 exon 58440156 58440336 58440156 ID=Msa0859950-mRNA-1:exon:17804;Parent=Msa0859950-mRNA-1
chr5_4 five_prime_UTR 58440264 58440336 58440264 ID=Msa0859950-mRNA-1:five_prime_utr;Parent=Msa0859950-mRNA-1
chr5_4 CDS 58440156 58440263 58440156 ID=Msa0859950-mRNA-1:cds;Parent=Msa0859950-mRNA-1
chr5_4 CDS 58439818 58440044 58439818 ID=Msa0859950-mRNA-1:cds;Parent=Msa0859950-mRNA-1
chr5_4 CDS 58439317 58439650 58439317 ID=Msa0859950-mRNA-1:cds;Parent=Msa0859950-mRNA-1
chr5_4 CDS 58438488 58438775 58438488 ID=Msa0859950-mRNA-1:cds;Parent=Msa0859950-mRNA-1
chr5_4 three_prime_UTR 58438064 58438487 58438064 ID=Msa0859950-mRNA-1:three_prime_utr;Parent=Msa0859950-mRNA-1
Gene Sequence

>Msa0859950

ATGATGATGAATTTCCCAATTATTAGCTTGGAGAAACTCAATGGTGTTGAGAGAAAAGACACCATGGAGAAAATTAAGGATGCTTGTGAGAATTGGGGATTCTTTGAGCTGGTGAATCATGGTATACCCCATGACCTTATGGACACATTGGAGAGGTTGACCAAAGAGCACTATAGGAAATGCATGGAGCATAGGTTTAAGGAAGTAATATCAAGCAAAGGCTTAGATGCTGTCCAAACTGAGGTCAAAGATATGGATTGGGAAAGCACCTTCCATGTTCGTCACCTCCCTGAATCAAACATTTCAGAGATACCTGATCTCAGTGATGAATACAGGAAAGTGATGAAGGAATTTTCTTTGAGGTTAGAGAAACTAGCAGAAGAGCTTTTGGATTTGTTATGTGAGAATCTTGGACTAGAGAAAGGTTACCTTAAAAAGGCATTTTATGGATCAAGAGGGCCAACTTTTGGCACCAAAGTAGCCAACTACCCTCAATGCCCAAATCCAGAGCTGGTGAAGGGTCTTCGTGCTCACACCGATGCCGGCGGAATCATCCTTCTCTTCCAGGATGACAAGGTCAGTGGCCTACAATTGCTCAAAGATGGCCAGTGGATTGATGTTCCCCCAATGCGCCACTCTATTGTTGTCAACCTTGGTGACCAACTTGAGGTAATAACAAATGGCAAGTACAAGAGTGTGGAACACCGTGTGATAGCACAAACAAATGGAACAAGAATGTCCATAGCATCATTCTACAACCCTGGGAGTGATGCTGTCATTTACCCTGCTCCAGAACTGTTGGAAAAACACGCAGAGGAAAAACACAATGTCTACCCAAAATTTGTGTTTGAAGAGTACATGAAGATCTATGCTGCTTTGAAATTTCATGCTAAGGAACCAAGATTTGAAGCCCTGAAAGAATCAAATGTTAATTTGGGTCCAATAGTAATTGTTTAA

Protein sequence

>Msa0859950

MMMNFPIISLEKLNGVERKDTMEKIKDACENWGFFELVNHGIPHDLMDTLERLTKEHYRKCMEHRFKEVISSKGLDAVQTEVKDMDWESTFHVRHLPESNISEIPDLSDEYRKVMKEFSLRLEKLAEELLDLLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPQCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQTNGTRMSIASFYNPGSDAVIYPAPELLEKHAEEKHNVYPKFVFEEYMKIYAALKFHAKEPRFEALKESNVNLGPIVIV*