Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03849.t1 | APC23631.1 | 100 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 2.80E-63 | 251.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03849.t1 | Q642A5 | 40.4 | 104 | 54 | 3 | 1 | 101 | 1 | 99 | 1.5e-12 | 73.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03849.t1 | A0A1J0F5C9 | 100.0 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 2.0e-63 | 251.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene03849.t1 | TF | NF-YB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03849.t1 | MTR_4g052950 | 93.571 | 140 | 3 | 1 | 1 | 134 | 1 | 140 | 7.44e-89 | 254 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03849.t1 | AT2G27470 | 69.231 | 91 | 28 | 0 | 4 | 94 | 8 | 98 | 2.56e-41 | 138 |
MS.gene03849.t1 | AT3G53340 | 33.051 | 118 | 69 | 4 | 7 | 124 | 34 | 141 | 4.51e-11 | 57.8 |
MS.gene03849.t1 | AT3G53340 | 33.051 | 118 | 69 | 4 | 7 | 124 | 34 | 141 | 4.51e-11 | 57.8 |
Find 36 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCATCTCCCTTTCCTTT+TGG | 0.216918 | 4.1:-44999399 | None:intergenic |
CACACGGCGTACGATAGTTT+TGG | 0.288672 | 4.1:-44997954 | None:intergenic |
ATCACCACCATCGCCTTTAT+CGG | 0.327084 | 4.1:-44999454 | None:intergenic |
GATGAAGATTCTGGCACTTT+CGG | 0.351884 | 4.1:-44998050 | None:intergenic |
GAAGGCGAGCCGTCCGATAA+AGG | 0.396478 | 4.1:+44999441 | MS.gene03849:CDS |
AAGGTAGTGGATGAAGATTC+TGG | 0.398524 | 4.1:-44998059 | None:intergenic |
CAGAGTTTACTGAGTTTGTT+GGG | 0.413182 | 4.1:+44998640 | MS.gene03849:CDS |
CCTCTAAAAGATTCTCTTGA+AGG | 0.437256 | 4.1:+44998663 | MS.gene03849:CDS |
ACAGAGTTTACTGAGTTTGT+TGG | 0.451694 | 4.1:+44998639 | MS.gene03849:CDS |
AGCGGCAGTGCCAAAAGGAA+AGG | 0.481373 | 4.1:+44999389 | MS.gene03849:CDS |
GCAGGGCTAATGATATATGT+AGG | 0.482928 | 4.1:+44998562 | MS.gene03849:intron |
AACGGCAATGTCGCCGTCGT+CGG | 0.485500 | 4.1:-44998002 | None:intergenic |
ATCGACAATGGCTGAGGCGG+AGG | 0.486553 | 4.1:+44997925 | None:intergenic |
TATCGTACGCCGTGTGGTGA+AGG | 0.496035 | 4.1:+44997961 | MS.gene03849:CDS |
CTTACGTAGCGGAAAGGTAG+TGG | 0.497193 | 4.1:-44998072 | None:intergenic |
GTCGCCGTCGTCGGAGCAAG+TGG | 0.510785 | 4.1:-44997993 | None:intergenic |
GAGAAAATCGACAATGGCTG+AGG | 0.540596 | 4.1:+44997919 | None:intergenic |
TGAGAAGGGAAAGAAAAGAA+AGG | 0.540607 | 4.1:+44999416 | MS.gene03849:CDS |
AAAAGGAAAGGGAGATGAGA+AGG | 0.549945 | 4.1:+44999401 | MS.gene03849:CDS |
CAGGGCTAATGATATATGTA+GGG | 0.556080 | 4.1:+44998563 | MS.gene03849:intron |
AAGAAAGCGGCAGTGCCAAA+AGG | 0.559929 | 4.1:+44999384 | MS.gene03849:CDS |
GCGGCAGTGCCAAAAGGAAA+GGG | 0.560436 | 4.1:+44999390 | MS.gene03849:CDS |
AAAATCGACAATGGCTGAGG+CGG | 0.566675 | 4.1:+44997922 | None:intergenic |
CCGTCCGATAAAGGCGATGG+TGG | 0.568694 | 4.1:+44999450 | MS.gene03849:CDS |
CTTTCCACTTGCTCCGACGA+CGG | 0.580800 | 4.1:+44997989 | MS.gene03849:CDS |
AAAGGAAAGGGAGATGAGAA+GGG | 0.589156 | 4.1:+44999402 | MS.gene03849:CDS |
CAAAACTATCGTACGCCGTG+TGG | 0.603664 | 4.1:+44997955 | MS.gene03849:CDS |
GGAAAGAAAAGAAAGGCGGA+AGG | 0.603937 | 4.1:+44999423 | MS.gene03849:CDS |
GAAGGGAAAGAAAAGAAAGG+CGG | 0.609576 | 4.1:+44999419 | MS.gene03849:CDS |
AAGAAGAGCGTCTTTGTGAA+CGG | 0.610289 | 4.1:-44998020 | None:intergenic |
CAAGCACTTACGTAGCGGAA+AGG | 0.621390 | 4.1:-44998078 | None:intergenic |
GAGCCGTCCGATAAAGGCGA+TGG | 0.623448 | 4.1:+44999447 | MS.gene03849:CDS |
CCACCATCGCCTTTATCGGA+CGG | 0.639857 | 4.1:-44999450 | None:intergenic |
AAAGAATGCTGGGAAGAAAG+CGG | 0.668115 | 4.1:+44999371 | MS.gene03849:CDS |
ATATATGTAGGGAGTCAAAG+AGG | 0.682246 | 4.1:+44998574 | MS.gene03849:CDS |
AAAGCTTCTCCTTCACCACA+CGG | 0.706469 | 4.1:-44997970 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAGAGGATAAAAATTA+GGG | + | chr4.1:44998370-44998389 | MS.gene03849:intron | 15.0% |
!! | ACATCAAATTTATCAAATTA+GGG | - | chr4.1:44998150-44998169 | None:intergenic | 15.0% |
!! | TAATAAAGAGGATAAAAATT+AGG | + | chr4.1:44998369-44998388 | MS.gene03849:intron | 15.0% |
!!! | AAAATTTTACAATGGTTTTT+GGG | + | chr4.1:44998310-44998329 | MS.gene03849:intron | 15.0% |
!!! | GAAAATTATGGTTTATATTT+TGG | + | chr4.1:44998276-44998295 | MS.gene03849:intron | 15.0% |
!! | AAATTGAAACTTTGATTGTA+AGG | + | chr4.1:44998245-44998264 | MS.gene03849:intron | 20.0% |
!! | GACATCAAATTTATCAAATT+AGG | - | chr4.1:44998151-44998170 | None:intergenic | 20.0% |
!!! | AATTATGGTTTATATTTTGG+AGG | + | chr4.1:44998279-44998298 | MS.gene03849:intron | 20.0% |
!!! | GAAAATTTTACAATGGTTTT+TGG | + | chr4.1:44998309-44998328 | MS.gene03849:intron | 20.0% |
!!! | TATTTTTCTTTTCATTGCAA+TGG | + | chr4.1:44998831-44998850 | MS.gene03849:intron | 20.0% |
! | AATTATTTGTGCGCAAATTA+GGG | - | chr4.1:44998118-44998137 | None:intergenic | 25.0% |
! | TAATTATTTGTGCGCAAATT+AGG | - | chr4.1:44998119-44998138 | None:intergenic | 25.0% |
! | TCATGGGTGATTTAAAAAAT+GGG | + | chr4.1:44998339-44998358 | MS.gene03849:intron | 25.0% |
! | TTCATGGGTGATTTAAAAAA+TGG | + | chr4.1:44998338-44998357 | MS.gene03849:intron | 25.0% |
!! | AATTGGGGAAATTTTGTAAT+GGG | + | chr4.1:44998192-44998211 | MS.gene03849:intron | 25.0% |
!! | ATAAAAATGGGAACTTTTTG+AGG | + | chr4.1:44998500-44998519 | MS.gene03849:intron | 25.0% |
!! | CAATTGGGAAAATTTTACAA+TGG | + | chr4.1:44998302-44998321 | MS.gene03849:intron | 25.0% |
!! | TAATTGGGGAAATTTTGTAA+TGG | + | chr4.1:44998191-44998210 | MS.gene03849:intron | 25.0% |
!! | TGTCATTTAAGCAATCATTA+TGG | + | chr4.1:44998808-44998827 | MS.gene03849:intron | 25.0% |
!!! | CATTTTAGAGTTACAATTCA+TGG | - | chr4.1:44998970-44998989 | None:intergenic | 25.0% |
!!! | TTTATATTTTGGAGGCAATT+GGG | + | chr4.1:44998287-44998306 | MS.gene03849:intron | 25.0% |
AAAAATTAGGGTTCGTAGTT+TGG | + | chr4.1:44998382-44998401 | MS.gene03849:intron | 30.0% | |
AAATTAGGGTTTCAGATAGA+AGG | - | chr4.1:44998104-44998123 | None:intergenic | 30.0% | |
AAGAGGAATGAAACTATTTG+TGG | + | chr4.1:44999165-44999184 | MS.gene03849:intron | 30.0% | |
AAGGAAGGAGATGAAAATTA+TGG | + | chr4.1:44998264-44998283 | MS.gene03849:intron | 30.0% | |
AATCCCCATTTAGTTGAAAA+TGG | + | chr4.1:44998901-44998920 | MS.gene03849:intron | 30.0% | |
AGAGGAATGAAACTATTTGT+GGG | + | chr4.1:44999166-44999185 | MS.gene03849:intron | 30.0% | |
AGTTTAGGAAAAAGAATGCT+GGG | + | chr4.1:44999361-44999380 | MS.gene03849:CDS | 30.0% | |
ATCCCCATTTAGTTGAAAAT+GGG | + | chr4.1:44998902-44998921 | MS.gene03849:intron | 30.0% | |
ATGGGAACTTTGTAATAAAG+AGG | + | chr4.1:44998357-44998376 | MS.gene03849:intron | 30.0% | |
TCCTGGGTGATTATAAAAAT+GGG | + | chr4.1:44998488-44998507 | MS.gene03849:intron | 30.0% | |
TGAAACTTTGATTGTAAGGA+AGG | + | chr4.1:44998249-44998268 | MS.gene03849:intron | 30.0% | |
TGCAATGGAAGTTCAAAAAA+AGG | + | chr4.1:44998846-44998865 | MS.gene03849:intron | 30.0% | |
TTATGCTACATAAACAAGTG+TGG | + | chr4.1:44999104-44999123 | MS.gene03849:intron | 30.0% | |
TTCCTGGGTGATTATAAAAA+TGG | + | chr4.1:44998487-44998506 | MS.gene03849:intron | 30.0% | |
! | AACCCATTTTCAACTAAATG+GGG | - | chr4.1:44998907-44998926 | None:intergenic | 30.0% |
! | AATGGGGAAAATTTTGCATT+GGG | + | chr4.1:44998409-44998428 | MS.gene03849:intron | 30.0% |
! | CAACCCATTTTCAACTAAAT+GGG | - | chr4.1:44998908-44998927 | None:intergenic | 30.0% |
! | GAAAATTTTGCATTGGGTTT+TGG | + | chr4.1:44998415-44998434 | MS.gene03849:intron | 30.0% |
! | GCATAGAATAACTCAGTTTT+AGG | - | chr4.1:44999010-44999029 | None:intergenic | 30.0% |
! | TCTTTTTCCTAAACTCTGAT+AGG | - | chr4.1:44999356-44999375 | None:intergenic | 30.0% |
! | TTTTTGACCTATCAGAGTTT+AGG | + | chr4.1:44999346-44999365 | MS.gene03849:intron | 30.0% |
!! | AATGGGTTGGTTATTATTGT+TGG | + | chr4.1:44998919-44998938 | MS.gene03849:intron | 30.0% |
!! | GTCAAAAAGAAAAAGTGTCA+AGG | - | chr4.1:44999334-44999353 | None:intergenic | 30.0% |
!! | GTTTATATTTTGGAGGCAAT+TGG | + | chr4.1:44998286-44998305 | MS.gene03849:intron | 30.0% |
!! | TTGTGTTGTTTGTATTTGCA+GGG | + | chr4.1:44998545-44998564 | MS.gene03849:intron | 30.0% |
!! | TTTGTGTTGTTTGTATTTGC+AGG | + | chr4.1:44998544-44998563 | MS.gene03849:intron | 30.0% |
!!! | CAGTTTTAGGCTTTTAACAA+TGG | - | chr4.1:44998997-44999016 | None:intergenic | 30.0% |
!!! | GGAAATTTTGTAATGGGTTT+TGG | + | chr4.1:44998198-44998217 | MS.gene03849:intron | 30.0% |
!!! | TGTTATGACTGCTTTGTTTT+CGG | + | chr4.1:44998703-44998722 | MS.gene03849:intron | 30.0% |
AAACAAAGCAGTCATAACAC+AGG | - | chr4.1:44998702-44998721 | None:intergenic | 35.0% | |
AACAAAGCAGTCATAACACA+GGG | - | chr4.1:44998701-44998720 | None:intergenic | 35.0% | |
AACTGAGTTATTCTATGCTC+TGG | + | chr4.1:44999012-44999031 | MS.gene03849:intron | 35.0% | |
ACAGAGTTTACTGAGTTTGT+TGG | + | chr4.1:44998639-44998658 | MS.gene03849:CDS | 35.0% | |
ATATATGTAGGGAGTCAAAG+AGG | + | chr4.1:44998574-44998593 | MS.gene03849:CDS | 35.0% | |
ATGGAAGATATGATCTTGCT+TGG | + | chr4.1:44999065-44999084 | MS.gene03849:intron | 35.0% | |
CAGGGCTAATGATATATGTA+GGG | + | chr4.1:44998563-44998582 | MS.gene03849:intron | 35.0% | |
CCATTTAGTTGAAAATGGGT+TGG | + | chr4.1:44998906-44998925 | MS.gene03849:intron | 35.0% | |
GAGTTTAGGAAAAAGAATGC+TGG | + | chr4.1:44999360-44999379 | MS.gene03849:intron | 35.0% | |
GCTAGTGAGTAATATTTGGT+TGG | + | chr4.1:44999130-44999149 | MS.gene03849:intron | 35.0% | |
GTCAGCTAGTGAGTAATATT+TGG | + | chr4.1:44999126-44999145 | MS.gene03849:intron | 35.0% | |
TGAGAAGGGAAAGAAAAGAA+AGG | + | chr4.1:44999416-44999435 | MS.gene03849:CDS | 35.0% | |
! | CAATGGGGAAAATTTTGCAT+TGG | + | chr4.1:44998408-44998427 | MS.gene03849:intron | 35.0% |
! | CAGAGTTTACTGAGTTTGTT+GGG | + | chr4.1:44998640-44998659 | MS.gene03849:CDS | 35.0% |
! | CCAACCCATTTTCAACTAAA+TGG | - | chr4.1:44998909-44998928 | None:intergenic | 35.0% |
! | CCTCTAAAAGATTCTCTTGA+AGG | + | chr4.1:44998663-44998682 | MS.gene03849:CDS | 35.0% |
! | CCTTCAAGAGAATCTTTTAG+AGG | - | chr4.1:44998666-44998685 | None:intergenic | 35.0% |
!! | AGAGTGAAGTGAAAGTATCA+TGG | + | chr4.1:44998777-44998796 | MS.gene03849:intron | 35.0% |
!! | ATTCCCTTTTTGGAGGTAAT+TGG | + | chr4.1:44998175-44998194 | MS.gene03849:intron | 35.0% |
!! | GATGTCTGAAATTCCCTTTT+TGG | + | chr4.1:44998165-44998184 | MS.gene03849:intron | 35.0% |
!! | TCCCATTTTTATAATCACCC+AGG | - | chr4.1:44998492-44998511 | None:intergenic | 35.0% |
!! | TGGCTATTTTGGAGGAAATT+GGG | + | chr4.1:44998435-44998454 | MS.gene03849:intron | 35.0% |
!! | TTCCCTTTTTGGAGGTAATT+GGG | + | chr4.1:44998176-44998195 | MS.gene03849:intron | 35.0% |
!! | TTGGCTATTTTGGAGGAAAT+TGG | + | chr4.1:44998434-44998453 | MS.gene03849:intron | 35.0% |
!!! | AAATTGGGGAAGTTTTGTTG+TGG | + | chr4.1:44998450-44998469 | MS.gene03849:intron | 35.0% |
!!! | AATTGGGGAAGTTTTGTTGT+GGG | + | chr4.1:44998451-44998470 | MS.gene03849:intron | 35.0% |
!!! | GGTTTTTGGGATTGATTCAT+GGG | + | chr4.1:44998323-44998342 | MS.gene03849:intron | 35.0% |
!!! | TGGTTTTTGGGATTGATTCA+TGG | + | chr4.1:44998322-44998341 | MS.gene03849:intron | 35.0% |
AAAAGGAAAGGGAGATGAGA+AGG | + | chr4.1:44999401-44999420 | MS.gene03849:CDS | 40.0% | |
AAAGAATGCTGGGAAGAAAG+CGG | + | chr4.1:44999371-44999390 | MS.gene03849:CDS | 40.0% | |
AAAGGAAAGGGAGATGAGAA+GGG | + | chr4.1:44999402-44999421 | MS.gene03849:CDS | 40.0% | |
AATTAGGGTTCGTAGTTTGG+AGG | + | chr4.1:44998385-44998404 | MS.gene03849:intron | 40.0% | |
GAAGGGAAAGAAAAGAAAGG+CGG | + | chr4.1:44999419-44999438 | MS.gene03849:CDS | 40.0% | |
GATGAAGATTCTGGCACTTT+CGG | - | chr4.1:44998053-44998072 | None:intergenic | 40.0% | |
GCAGGGCTAATGATATATGT+AGG | + | chr4.1:44998562-44998581 | MS.gene03849:intron | 40.0% | |
TCCCCAATTACCTCCAAAAA+GGG | - | chr4.1:44998181-44998200 | None:intergenic | 40.0% | |
TCTTCCATCATGCTTAGAGT+TGG | - | chr4.1:44999053-44999072 | None:intergenic | 40.0% | |
TGAACCAACTCTAAGCATGA+TGG | + | chr4.1:44999046-44999065 | MS.gene03849:intron | 40.0% | |
TTCCCCAATTACCTCCAAAA+AGG | - | chr4.1:44998182-44998201 | None:intergenic | 40.0% | |
! | GTTGGTTCATAGCTACAAAG+AGG | + | chr4.1:44999148-44999167 | MS.gene03849:intron | 40.0% |
! | TTCTCATCTCCCTTTCCTTT+TGG | - | chr4.1:44999402-44999421 | None:intergenic | 40.0% |
!! | AAGAAGAGCGTCTTTGTGAA+CGG | - | chr4.1:44998023-44998042 | None:intergenic | 40.0% |
!! | AAGGTAGTGGATGAAGATTC+TGG | - | chr4.1:44998062-44998081 | None:intergenic | 40.0% |
!! | GGCTATTTTGGAGGAAATTG+GGG | + | chr4.1:44998436-44998455 | MS.gene03849:intron | 40.0% |
!! | GTCTGAAATTCCCTTTTTGG+AGG | + | chr4.1:44998168-44998187 | MS.gene03849:intron | 40.0% |
!! | TCCCTTTTTGGAGGTAATTG+GGG | + | chr4.1:44998177-44998196 | MS.gene03849:intron | 40.0% |
!!! | GCATTGGGTTTTGGCTATTT+TGG | + | chr4.1:44998424-44998443 | MS.gene03849:intron | 40.0% |
!!! | GGAAGTTTTGTTGTGGGTTT+TGG | + | chr4.1:44998457-44998476 | MS.gene03849:intron | 40.0% |
!!! | GGTTTTGGAGATTGATTCCT+GGG | + | chr4.1:44998472-44998491 | MS.gene03849:intron | 40.0% |
!!! | TTGGGTTTTGGCTATTTTGG+AGG | + | chr4.1:44998427-44998446 | MS.gene03849:intron | 40.0% |
AAAGCTTCTCCTTCACCACA+CGG | - | chr4.1:44997973-44997992 | None:intergenic | 45.0% | |
ATCACCACCATCGCCTTTAT+CGG | - | chr4.1:44999457-44999476 | None:intergenic | 45.0% | |
GACCAATATCTGCCCTAACT+TGG | + | chr4.1:44999304-44999323 | MS.gene03849:intron | 45.0% | |
GGAAAGAAAAGAAAGGCGGA+AGG | + | chr4.1:44999423-44999442 | MS.gene03849:CDS | 45.0% | |
GTTCGTAGTTTGGAGGCAAT+GGG | + | chr4.1:44998392-44998411 | MS.gene03849:intron | 45.0% | |
TGCCAAGTTAGGGCAGATAT+TGG | - | chr4.1:44999309-44999328 | None:intergenic | 45.0% | |
TGTCAAGGTCTGCCAAGTTA+GGG | - | chr4.1:44999319-44999338 | None:intergenic | 45.0% | |
TTCGTAGTTTGGAGGCAATG+GGG | + | chr4.1:44998393-44998412 | MS.gene03849:intron | 45.0% | |
! | ACACGGCGTACGATAGTTTT+GGG | - | chr4.1:44997956-44997975 | None:intergenic | 45.0% |
!!! | GGGTTTTGGAGATTGATTCC+TGG | + | chr4.1:44998471-44998490 | MS.gene03849:intron | 45.0% |
AAGAAAGCGGCAGTGCCAAA+AGG | + | chr4.1:44999384-44999403 | MS.gene03849:CDS | 50.0% | |
CAAAACTATCGTACGCCGTG+TGG | + | chr4.1:44997955-44997974 | MS.gene03849:CDS | 50.0% | |
GAAGGCAAGCACTTACGTAG+CGG | - | chr4.1:44998086-44998105 | None:intergenic | 50.0% | |
GGTTCGTAGTTTGGAGGCAA+TGG | + | chr4.1:44998391-44998410 | MS.gene03849:intron | 50.0% | |
GTGTCAAGGTCTGCCAAGTT+AGG | - | chr4.1:44999320-44999339 | None:intergenic | 50.0% | |
! | CAAGCACTTACGTAGCGGAA+AGG | - | chr4.1:44998081-44998100 | None:intergenic | 50.0% |
! | CACACGGCGTACGATAGTTT+TGG | - | chr4.1:44997957-44997976 | None:intergenic | 50.0% |
! | CTTACGTAGCGGAAAGGTAG+TGG | - | chr4.1:44998075-44998094 | None:intergenic | 50.0% |
AGCGGCAGTGCCAAAAGGAA+AGG | + | chr4.1:44999389-44999408 | MS.gene03849:CDS | 55.0% | |
CCACCATCGCCTTTATCGGA+CGG | - | chr4.1:44999453-44999472 | None:intergenic | 55.0% | |
CTTTCCACTTGCTCCGACGA+CGG | + | chr4.1:44997989-44998008 | MS.gene03849:CDS | 55.0% | |
GCGGCAGTGCCAAAAGGAAA+GGG | + | chr4.1:44999390-44999409 | MS.gene03849:CDS | 55.0% | |
TATCGTACGCCGTGTGGTGA+AGG | + | chr4.1:44997961-44997980 | MS.gene03849:CDS | 55.0% | |
AACGGCAATGTCGCCGTCGT+CGG | - | chr4.1:44998005-44998024 | None:intergenic | 60.0% | |
CCGTCCGATAAAGGCGATGG+TGG | + | chr4.1:44999450-44999469 | MS.gene03849:CDS | 60.0% | |
GAAGGCGAGCCGTCCGATAA+AGG | + | chr4.1:44999441-44999460 | MS.gene03849:CDS | 60.0% | |
GAGCCGTCCGATAAAGGCGA+TGG | + | chr4.1:44999447-44999466 | MS.gene03849:CDS | 60.0% | |
GTCGCCGTCGTCGGAGCAAG+TGG | - | chr4.1:44997996-44998015 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 44997932 | 44999488 | 44997932 | ID=MS.gene03849 |
chr4.1 | mRNA | 44997932 | 44999488 | 44997932 | ID=MS.gene03849.t1;Parent=MS.gene03849 |
chr4.1 | exon | 44997932 | 44998089 | 44997932 | ID=MS.gene03849.t1.exon1;Parent=MS.gene03849.t1 |
chr4.1 | CDS | 44997932 | 44998089 | 44997932 | ID=cds.MS.gene03849.t1;Parent=MS.gene03849.t1 |
chr4.1 | exon | 44998566 | 44998684 | 44998566 | ID=MS.gene03849.t1.exon2;Parent=MS.gene03849.t1 |
chr4.1 | CDS | 44998566 | 44998684 | 44998566 | ID=cds.MS.gene03849.t1;Parent=MS.gene03849.t1 |
chr4.1 | exon | 44999361 | 44999488 | 44999361 | ID=MS.gene03849.t1.exon3;Parent=MS.gene03849.t1 |
chr4.1 | CDS | 44999361 | 44999488 | 44999361 | ID=cds.MS.gene03849.t1;Parent=MS.gene03849.t1 |
Gene Sequence |
Protein sequence |