AlfalfaGEDB | MS.gene39538

M. sativa cultivar XinJiangDaYe / MS.gene39538

KEGG: K11253
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0032991 GO:0032993 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:1901363
PFAM: PF00125.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39538.t1	XP_004512510.2	100	136	0	0	1	136	104	239	5.80E-64	253.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39538.t1	P68429	100.0	136	0	0	1	136	1	136	1.4e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39538.t1	A0A1S3TJX1	100.0	136	0	0	1	136	1	136	4.2e-64	253.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049989	MS.gene39538	0.827042	1.95E-54	-1.69E-46
MS.gene05124	MS.gene39538	0.80073	1.26E-48	-1.69E-46
MS.gene051816	MS.gene39538	0.806144	9.49E-50	-1.69E-46
MS.gene051914	MS.gene39538	0.824779	6.71E-54	-1.69E-46
MS.gene051955	MS.gene39538	0.802318	5.94E-49	-1.69E-46
MS.gene052308	MS.gene39538	0.854076	1.57E-61	-1.69E-46
MS.gene052367	MS.gene39538	0.830915	2.24E-55	-1.69E-46
MS.gene053173	MS.gene39538	0.85555	5.85E-62	-1.69E-46
MS.gene053348	MS.gene39538	0.8527	3.89E-61	-1.69E-46
MS.gene053416	MS.gene39538	0.815346	9.69E-52	-1.69E-46
MS.gene053417	MS.gene39538	0.811509	6.76E-51	-1.69E-46
MS.gene054551	MS.gene39538	0.883006	6.46E-71	-1.69E-46
MS.gene054552	MS.gene39538	0.826914	2.09E-54	-1.69E-46
MS.gene054593	MS.gene39538	0.885	1.19E-71	-1.69E-46
MS.gene054885	MS.gene39538	0.821343	4.25E-53	-1.69E-46
MS.gene055308	MS.gene39538	0.870495	1.40E-66	-1.69E-46
MS.gene055578	MS.gene39538	0.854613	1.10E-61	-1.69E-46
MS.gene055957	MS.gene39538	0.898154	7.01E-77	-1.69E-46
MS.gene056041	MS.gene39538	0.898429	5.35E-77	-1.69E-46
MS.gene056042	MS.gene39538	0.842637	2.29E-58	-1.69E-46
MS.gene056335	MS.gene39538	0.840749	7.21E-58	-1.69E-46
MS.gene05640	MS.gene39538	0.890235	1.18E-73	-1.69E-46
MS.gene056526	MS.gene39538	0.825539	4.44E-54	-1.69E-46
MS.gene056528	MS.gene39538	0.844011	9.84E-59	-1.69E-46
MS.gene05652	MS.gene39538	0.82129	4.37E-53	-1.69E-46
MS.gene057367	MS.gene39538	0.804994	1.65E-49	-1.69E-46
MS.gene057458	MS.gene39538	0.880375	5.78E-70	-1.69E-46
MS.gene058013	MS.gene39538	0.807518	4.86E-50	-1.69E-46
MS.gene058128	MS.gene39538	0.877951	4.16E-69	-1.69E-46
MS.gene058853	MS.gene39538	0.864876	8.87E-65	-1.69E-46
MS.gene059553	MS.gene39538	0.850804	1.34E-60	-1.69E-46
MS.gene059616	MS.gene39538	0.820335	7.24E-53	-1.69E-46
MS.gene060473	MS.gene39538	0.84213	3.12E-58	-1.69E-46
MS.gene060565	MS.gene39538	0.833669	4.67E-56	-1.69E-46
MS.gene06093	MS.gene39538	0.85949	3.99E-63	-1.69E-46
MS.gene061099	MS.gene39538	0.87597	2.02E-68	-1.69E-46
MS.gene061260	MS.gene39538	0.839051	2.00E-57	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene39538	MS.gene64164	PPI
MS.gene60199	MS.gene39538	PPI
MS.gene39538	MS.gene41679	PPI
MS.gene39538	MS.gene36496	PPI
MS.gene020313	MS.gene39538	PPI
MS.gene39538	MS.gene057458	PPI
MS.gene39538	MS.gene29521	PPI
MS.gene44458	MS.gene39538	PPI
MS.gene39538	MS.gene028296	PPI
MS.gene39538	MS.gene07616	PPI
MS.gene39538	MS.gene055512	PPI
MS.gene39538	MS.gene58112	PPI
MS.gene39538	MS.gene29300	PPI
MS.gene78922	MS.gene39538	PPI
MS.gene39538	MS.gene070538	PPI
MS.gene071851	MS.gene39538	PPI
MS.gene39538	MS.gene071851	PPI
MS.gene39538	MS.gene072432	PPI
MS.gene016712	MS.gene39538	PPI
MS.gene39538	MS.gene018762	PPI
MS.gene39538	MS.gene00233	PPI
MS.gene39538	MS.gene68716	PPI
MS.gene97701	MS.gene39538	PPI
MS.gene39538	MS.gene068178	PPI
MS.gene39538	MS.gene47573	PPI
MS.gene39538	MS.gene94315	PPI
MS.gene39538	MS.gene66836	PPI
MS.gene39538	MS.gene059054	PPI
MS.gene39538	MS.gene47284	PPI
MS.gene39538	MS.gene55626	PPI
MS.gene39538	MS.gene61193	PPI
MS.gene39538	MS.gene82109	PPI
MS.gene39538	MS.gene04820	PPI
MS.gene39538	MS.gene069975	PPI
MS.gene39538	MS.gene34797	PPI
MS.gene39538	MS.gene78324	PPI
MS.gene39538	MS.gene072433	PPI
MS.gene44457	MS.gene39538	PPI
MS.gene064876	MS.gene39538	PPI
MS.gene39538	MS.gene017431	PPI
MS.gene39538	MS.gene78227	PPI
MS.gene39538	MS.gene70258	PPI
MS.gene66051	MS.gene39538	PPI
MS.gene39538	MS.gene066537	PPI
MS.gene39538	MS.gene65125	PPI
MS.gene39538	MS.gene056335	PPI
MS.gene39538	MS.gene011710	PPI
MS.gene39538	MS.gene23886	PPI
MS.gene39538	MS.gene013163	PPI
MS.gene39538	MS.gene88233	PPI
MS.gene39538	MS.gene046235	PPI
MS.gene39538	MS.gene29299	PPI
MS.gene39538	MS.gene32514	PPI
MS.gene39538	MS.gene015760	PPI
MS.gene39538	MS.gene94307	PPI
MS.gene39538	MS.gene89203	PPI
MS.gene39538	MS.gene52605	PPI
MS.gene39538	MS.gene63118	PPI
MS.gene39538	MS.gene066535	PPI
MS.gene39538	MS.gene58116	PPI
MS.gene39538	MS.gene78224	PPI
MS.gene39538	MS.gene038612	PPI
MS.gene39538	MS.gene033505	PPI
MS.gene049111	MS.gene39538	PPI
MS.gene39538	MS.gene027904	PPI
MS.gene39538	MS.gene042871	PPI
MS.gene70263	MS.gene39538	PPI
MS.gene58285	MS.gene39538	PPI
MS.gene39538	MS.gene60196	PPI
MS.gene39538	MS.gene29298	PPI
MS.gene39538	MS.gene44458	PPI
MS.gene39538	MS.gene78322	PPI
MS.gene39538	MS.gene46303	PPI
MS.gene39538	MS.gene98552	PPI
MS.gene39538	MS.gene28438	PPI
MS.gene39538	MS.gene64996	PPI
MS.gene39538	MS.gene26084	PPI
MS.gene39538	MS.gene066960	PPI
MS.gene68113	MS.gene39538	PPI
MS.gene067742	MS.gene39538	PPI
MS.gene39538	MS.gene063067	PPI
MS.gene39538	MS.gene06236	PPI
MS.gene011711	MS.gene39538	PPI
MS.gene39538	MS.gene066536	PPI
MS.gene87898	MS.gene39538	PPI
MS.gene39538	MS.gene021887	PPI
MS.gene39538	MS.gene072431	PPI
MS.gene39538	MS.gene78924	PPI
MS.gene61192	MS.gene39538	PPI
MS.gene39538	MS.gene03849	PPI
MS.gene39538	MS.gene04748	PPI
MS.gene39538	MS.gene35163	PPI
MS.gene39538	MS.gene49838	PPI
MS.gene39538	MS.gene29445	PPI
MS.gene95244	MS.gene39538	PPI
MS.gene39538	MS.gene32513	PPI
MS.gene78924	MS.gene39538	PPI
MS.gene39538	MS.gene81646	PPI
MS.gene39538	MS.gene030661	PPI
MS.gene39538	MS.gene66752	PPI
MS.gene39538	MS.gene26406	PPI
MS.gene39538	MS.gene70990	PPI
MS.gene39538	MS.gene24196	PPI
MS.gene39538	MS.gene068179	PPI
MS.gene39538	MS.gene027909	PPI
MS.gene027907	MS.gene39538	PPI
MS.gene39538	MS.gene70261	PPI
MS.gene39538	MS.gene009155	PPI
MS.gene39538	MS.gene25357	PPI
MS.gene28434	MS.gene39538	PPI
MS.gene014301	MS.gene39538	PPI
MS.gene000604	MS.gene39538	PPI
MS.gene58116	MS.gene39538	PPI
MS.gene39538	MS.gene97703	PPI
MS.gene39538	MS.gene64998	PPI
MS.gene39538	MS.gene78323	PPI
MS.gene39538	MS.gene91631	PPI
MS.gene39538	MS.gene58114	PPI
MS.gene39538	MS.gene030664	PPI
MS.gene28432	MS.gene39538	PPI
MS.gene39538	MS.gene50129	PPI
MS.gene79799	MS.gene39538	PPI
MS.gene39538	MS.gene034255	PPI
MS.gene39538	MS.gene014181	PPI
MS.gene39538	MS.gene030666	PPI
MS.gene39538	MS.gene60200	PPI
MS.gene39538	MS.gene053230	PPI
MS.gene39538	MS.gene05905	PPI
MS.gene39538	MS.gene66051	PPI
MS.gene39538	MS.gene024064	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39538.t1	MTR_7g059070	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_5g029820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_5g029770	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_4g065990	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_4g088150	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_2g035230	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_8g092720	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_8g063500	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_8g103245	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_8g092820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene39538.t1	MTR_7g013610	100.000	136	0	0	1	136	100	235	1.10e-95	275
MS.gene39538.t1	MTR_4g097175	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene39538.t1	MTR_1g023630	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene39538.t1	MTR_8g061940	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene39538.t1	MTR_8g099430	96.324	136	5	0	1	136	1	136	1.38e-92	264
MS.gene39538.t1	MTR_4g097170	96.324	136	5	0	1	136	42	177	2.29e-91	262
MS.gene39538.t1	MTR_2g082310	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene39538.t1	MTR_2g082340	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene39538.t1	MTR_2g082370	85.616	146	11	1	1	136	1	146	1.74e-82	238
MS.gene39538.t1	MTR_2g082400	84.559	136	19	2	1	135	1	135	6.38e-75	219
MS.gene39538.t1	MTR_7g013600	86.607	112	15	0	25	136	2	113	1.01e-65	195
MS.gene39538.t1	MTR_7g023830	67.164	134	43	1	1	134	1	133	6.48e-56	171
MS.gene39538.t1	MTR_1g023630	73.504	117	15	3	1	111	1	107	3.81e-52	160
MS.gene39538.t1	MTR_5g024630	67.241	116	35	2	1	116	1	113	1.63e-45	144
MS.gene39538.t1	MTR_7g023880	58.647	133	41	3	3	134	18	137	5.46e-43	139
MS.gene39538.t1	MTR_5g024530	68.182	110	12	2	19	128	68	154	4.56e-42	137
MS.gene39538.t1	MTR_0197s0100	100.000	66	0	0	1	66	1	66	1.45e-40	132
MS.gene39538.t1	MTR_8g027840	55.102	98	43	1	37	133	28	125	4.83e-30	105
MS.gene39538.t1	MTR_8g105150	53.846	91	10	1	37	127	11	69	1.43e-25	92.4
MS.gene39538.t1	MTR_8g092740	97.368	38	1	0	99	136	118	155	4.60e-20	80.9
MS.gene39538.t1	MTR_5g089120	76.190	42	10	0	82	123	6	47	6.07e-18	73.6
MS.gene39538.t1	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.76e-15	66.2
MS.gene39538.t1	MTR_4g128040	75.676	37	9	0	79	115	20	56	3.38e-15	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39538.t1	AT5G65360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene39538.t1	AT5G10390	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene39538.t1	AT5G10400	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene39538.t1	AT3G27360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene39538.t1	AT1G09200	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene39538.t1	AT5G10980	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene39538.t1	AT4G40030	97.059	136	4	0	1	136	29	164	6.76e-93	266
MS.gene39538.t1	AT5G65350	94.853	136	7	0	1	136	1	136	5.09e-91	260
MS.gene39538.t1	AT1G75600	93.382	136	9	0	1	136	1	136	1.20e-89	256
MS.gene39538.t1	AT1G13370	93.382	136	9	0	1	136	1	136	5.32e-89	254
MS.gene39538.t1	AT1G19890	89.781	137	13	1	1	136	1	137	1.03e-83	241
MS.gene39538.t1	AT5G12910	71.111	135	34	2	1	135	1	130	9.51e-67	198
MS.gene39538.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene39538.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene39538.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene39538.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110

Find 50 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAGAAACCTCACCGTTTC+AGG	0.224781	4.2:-23184335	MS.gene39538:CDS
TCACGGAGAGCGACGGTTCC+TGG	0.319730	4.2:+23184312	None:intergenic
TGAGGAGCTCAGTGCTCTTC+TGG	0.339681	4.2:+23184277	None:intergenic
AAGCCGACACGGCGGAGCTC+TGG	0.377718	4.2:+23184187	None:intergenic
TTCTTCACTCCGCCGGTGGC+CGG	0.393192	4.2:+23184351	None:intergenic
TTTGTGGCGAGTTGCTTCCT+TGG	0.400731	4.2:+23184393	None:intergenic
GGAAGGGGAGTTTGCGGATG+AGG	0.429699	4.2:+23184259	None:intergenic
TTATCTCGTCGGTCTCTTTG+AGG	0.447224	4.2:-23184145	MS.gene39538:CDS
CTTCCTTGGAGCTTTGCCAC+CGG	0.456245	4.2:+23184407	None:intergenic
CGCAAATCTGCTCCGGCCAC+CGG	0.457456	4.2:-23184363	MS.gene39538:CDS
AGTGACACGCTTAGCATGAA+TGG	0.474744	4.2:+23184107	None:intergenic
CCTTGGAGCTTTGCCACCGG+TGG	0.488901	4.2:+23184410	None:intergenic
CGCTTCTTGCAAAGCCGACA+CGG	0.492590	4.2:+23184176	None:intergenic
CGACGGTTCCTGGCCTGAAA+CGG	0.503357	4.2:+23184322	None:intergenic
GGCTTTGCAAGAAGCGGCCG+AGG	0.504571	4.2:-23184169	MS.gene39538:CDS
GGATTTGCGAGCGGTTTGCT+TGG	0.506530	4.2:+23184431	None:intergenic
CTAGCGAGCTGGATATCCTT+AGG	0.510191	4.2:+23184078	None:intergenic
AAACCTCACCGTTTCAGGCC+AGG	0.512079	4.2:-23184330	MS.gene39538:CDS
CACGGATACGCCTAGCGAGC+TGG	0.513784	4.2:+23184067	None:intergenic
TTTCCAGAGCTCCGCCGTGT+CGG	0.519570	4.2:-23184190	MS.gene39538:CDS
GACGCTGGAAGGGGAGTTTG+CGG	0.521996	4.2:+23184253	None:intergenic
ACACGGCGGAGCTCTGGAAA+CGG	0.525377	4.2:+23184193	None:intergenic
AGCCGCTCGCAAATCTGCTC+CGG	0.526992	4.2:-23184370	MS.gene39538:CDS
CACGGACAAGACGCTGGAAG+GGG	0.529109	4.2:+23184244	None:intergenic
CTCACGGACAAGACGCTGGA+AGG	0.539901	4.2:+23184242	None:intergenic
GTGAGGTTTCTTCACTCCGC+CGG	0.553823	4.2:+23184344	None:intergenic
CTAAGGATATCCAGCTCGCT+AGG	0.554905	4.2:-23184077	MS.gene39538:CDS
GCGTGTCACTATCATGCCTA+AGG	0.557496	4.2:-23184094	MS.gene39538:CDS
TGAAATCCTGAGCGATCTCA+CGG	0.570370	4.2:+23184226	None:intergenic
TCTGGTACTTGCGGATCTCA+CGG	0.571857	4.2:+23184295	None:intergenic
CCACCGGTGGCAAAGCTCCA+AGG	0.572773	4.2:-23184410	MS.gene39538:CDS
CAGTGCTCTTCTGGTACTTG+CGG	0.579006	4.2:+23184286	None:intergenic
TCACGGACAAGACGCTGGAA+GGG	0.583031	4.2:+23184243	None:intergenic
AAATCTGCTCCGGCCACCGG+CGG	0.584127	4.2:-23184360	MS.gene39538:CDS
CGATCTCACGGACAAGACGC+TGG	0.585935	4.2:+23184238	None:intergenic
AGGTTTCTTCACTCCGCCGG+TGG	0.590490	4.2:+23184347	None:intergenic
TCTTGTCCGTGAGATCGCTC+AGG	0.603921	4.2:-23184232	MS.gene39538:CDS
GCGGCCGAGGCTTATCTCGT+CGG	0.608232	4.2:-23184156	MS.gene39538:CDS
CAAACCGCTCGCAAATCCAC+CGG	0.613586	4.2:-23184426	MS.gene39538:CDS
ACCGCTCGCAAATCCACCGG+TGG	0.632751	4.2:-23184423	MS.gene39538:CDS
AAGATCAAGCACGCTCGCCA+CGG	0.639365	4.2:+23184049	None:intergenic
GGCCGGAGCAGATTTGCGAG+CGG	0.640066	4.2:+23184368	None:intergenic
GCCACCGGTGGATTTGCGAG+CGG	0.642552	4.2:+23184422	None:intergenic
CGTGTCGGCTTTGCAAGAAG+CGG	0.647453	4.2:-23184175	MS.gene39538:CDS
GAGACCGACGAGATAAGCCT+CGG	0.653052	4.2:+23184152	None:intergenic
GCGGATCTCACGGAGAGCGA+CGG	0.662183	4.2:+23184305	None:intergenic
GTTCCTGGCCTGAAACGGTG+AGG	0.663103	4.2:+23184327	None:intergenic
CAGCTCGCTAGGCGTATCCG+TGG	0.667707	4.2:-23184066	MS.gene39538:CDS
GCTTAGCATGAATGGCGCAG+AGG	0.694649	4.2:+23184115	None:intergenic
TTCTTGCAAAGCCGACACGG+CGG	0.736453	4.2:+23184179	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGTGACACGCTTAGCATGAA+TGG	+	chr4.2:23184390-23184409	None:intergenic	45.0%
	TGAAATCCTGAGCGATCTCA+CGG	+	chr4.2:23184271-23184290	None:intergenic	45.0%
	TGAAGAAACCTCACCGTTTC+AGG	-	chr4.2:23184159-23184178	MS.gene39538:CDS	45.0%
	TTATCTCGTCGGTCTCTTTG+AGG	-	chr4.2:23184349-23184368	MS.gene39538:CDS	45.0%
	CAGTGCTCTTCTGGTACTTG+CGG	+	chr4.2:23184211-23184230	None:intergenic	50.0%
	CTAAGGATATCCAGCTCGCT+AGG	-	chr4.2:23184417-23184436	MS.gene39538:CDS	50.0%
	CTAGCGAGCTGGATATCCTT+AGG	+	chr4.2:23184419-23184438	None:intergenic	50.0%
	TCTGGTACTTGCGGATCTCA+CGG	+	chr4.2:23184202-23184221	None:intergenic	50.0%
	TTTGTGGCGAGTTGCTTCCT+TGG	+	chr4.2:23184104-23184123	None:intergenic	50.0%
!	AGATTTGCGAGCGGCTTTTG+TGG	+	chr4.2:23184120-23184139	None:intergenic	50.0%
!	GCGTGTCACTATCATGCCTA+AGG	-	chr4.2:23184400-23184419	MS.gene39538:CDS	50.0%
	AAACCTCACCGTTTCAGGCC+AGG	-	chr4.2:23184164-23184183	MS.gene39538:CDS	55.0%
	CAAACCGCTCGCAAATCCAC+CGG	-	chr4.2:23184068-23184087	MS.gene39538:CDS	55.0%
	CGCTTCTTGCAAAGCCGACA+CGG	+	chr4.2:23184321-23184340	None:intergenic	55.0%
	CTTCCTTGGAGCTTTGCCAC+CGG	+	chr4.2:23184090-23184109	None:intergenic	55.0%
	GAGACCGACGAGATAAGCCT+CGG	+	chr4.2:23184345-23184364	None:intergenic	55.0%
	GCTTAGCATGAATGGCGCAG+AGG	+	chr4.2:23184382-23184401	None:intergenic	55.0%
	GTGAGGTTTCTTCACTCCGC+CGG	+	chr4.2:23184153-23184172	None:intergenic	55.0%
	TCACGGACAAGACGCTGGAA+GGG	+	chr4.2:23184254-23184273	None:intergenic	55.0%
	TCTTGTCCGTGAGATCGCTC+AGG	-	chr4.2:23184262-23184281	MS.gene39538:CDS	55.0%
	TGAGGAGCTCAGTGCTCTTC+TGG	+	chr4.2:23184220-23184239	None:intergenic	55.0%
	TTCTTGCAAAGCCGACACGG+CGG	+	chr4.2:23184318-23184337	None:intergenic	55.0%
!	GGATTTGCGAGCGGTTTGCT+TGG	+	chr4.2:23184066-23184085	None:intergenic	55.0%
!!	CGTGTCGGCTTTGCAAGAAG+CGG	-	chr4.2:23184319-23184338	MS.gene39538:CDS	55.0%
	AGCCGCTCGCAAATCTGCTC+CGG	-	chr4.2:23184124-23184143	MS.gene39538:CDS	60.0%
	AGGTTTCTTCACTCCGCCGG+TGG	+	chr4.2:23184150-23184169	None:intergenic	60.0%
	CACGGACAAGACGCTGGAAG+GGG	+	chr4.2:23184253-23184272	None:intergenic	60.0%
	CGACGGTTCCTGGCCTGAAA+CGG	+	chr4.2:23184175-23184194	None:intergenic	60.0%
	CGATCTCACGGACAAGACGC+TGG	+	chr4.2:23184259-23184278	None:intergenic	60.0%
	CTCACGGACAAGACGCTGGA+AGG	+	chr4.2:23184255-23184274	None:intergenic	60.0%
	GACGCTGGAAGGGGAGTTTG+CGG	+	chr4.2:23184244-23184263	None:intergenic	60.0%
	GGAAGGGGAGTTTGCGGATG+AGG	+	chr4.2:23184238-23184257	None:intergenic	60.0%
	GTTCCTGGCCTGAAACGGTG+AGG	+	chr4.2:23184170-23184189	None:intergenic	60.0%
	TTTCCAGAGCTCCGCCGTGT+CGG	-	chr4.2:23184304-23184323	MS.gene39538:CDS	60.0%
!!	ACACGGCGGAGCTCTGGAAA+CGG	+	chr4.2:23184304-23184323	None:intergenic	60.0%
	AAATCTGCTCCGGCCACCGG+CGG	-	chr4.2:23184134-23184153	MS.gene39538:CDS	65.0%
	ACCGCTCGCAAATCCACCGG+TGG	-	chr4.2:23184071-23184090	MS.gene39538:CDS	65.0%
	CACGGATACGCCTAGCGAGC+TGG	+	chr4.2:23184430-23184449	None:intergenic	65.0%
	CAGCTCGCTAGGCGTATCCG+TGG	-	chr4.2:23184428-23184447	MS.gene39538:CDS	65.0%
	CCACCGGTGGCAAAGCTCCA+AGG	-	chr4.2:23184084-23184103	MS.gene39538:CDS	65.0%
	CCTTGGAGCTTTGCCACCGG+TGG	+	chr4.2:23184087-23184106	None:intergenic	65.0%
	CGCAAATCTGCTCCGGCCAC+CGG	-	chr4.2:23184131-23184150	MS.gene39538:CDS	65.0%
	GCGGATCTCACGGAGAGCGA+CGG	+	chr4.2:23184192-23184211	None:intergenic	65.0%
	GCGGCCGAGGCTTATCTCGT+CGG	-	chr4.2:23184338-23184357	MS.gene39538:CDS	65.0%
	GGCCGGAGCAGATTTGCGAG+CGG	+	chr4.2:23184129-23184148	None:intergenic	65.0%
	GGCTTTGCAAGAAGCGGCCG+AGG	-	chr4.2:23184325-23184344	MS.gene39538:CDS	65.0%
	TCACGGAGAGCGACGGTTCC+TGG	+	chr4.2:23184185-23184204	None:intergenic	65.0%
	TTCTTCACTCCGCCGGTGGC+CGG	+	chr4.2:23184146-23184165	None:intergenic	65.0%
!	GCCACCGGTGGATTTGCGAG+CGG	+	chr4.2:23184075-23184094	None:intergenic	65.0%
	AAGCCGACACGGCGGAGCTC+TGG	+	chr4.2:23184310-23184329	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	23184053	23184463	23184053	ID=MS.gene39538
chr4.2	mRNA	23184053	23184463	23184053	ID=MS.gene39538.t1;Parent=MS.gene39538
chr4.2	exon	23184053	23184463	23184053	ID=MS.gene39538.t1.exon1;Parent=MS.gene39538.t1
chr4.2	CDS	23184053	23184463	23184053	ID=cds.MS.gene39538.t1;Parent=MS.gene39538.t1

Gene Sequence

>MS.gene39538

ATGGCACGTACCAAGCAAACCGCTCGCAAATCCACCGGTGGCAAAGCTCCAAGGAAGCAACTCGCCACAAAAGCCGCTCGCAAATCTGCTCCGGCCACCGGCGGAGTGAAGAAACCTCACCGTTTCAGGCCAGGAACCGTCGCTCTCCGTGAGATCCGCAAGTACCAGAAGAGCACTGAGCTCCTCATCCGCAAACTCCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGATTTCAAGACTGATCTCCGTTTCCAGAGCTCCGCCGTGTCGGCTTTGCAAGAAGCGGCCGAGGCTTATCTCGTCGGTCTCTTTGAGGATACTAACCTCTGCGCCATTCATGCTAAGCGTGTCACTATCATGCCTAAGGATATCCAGCTCGCTAGGCGTATCCGTGGCGAGCGTGCTTGA

Protein sequence

>MS.gene39538.t1

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA