AlfalfaGEDB | MS.gene47573

M. sativa cultivar XinJiangDaYe / MS.gene47573

KEGG: K11253
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0032991 GO:0032993 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:1901363
PFAM: PF00125.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47573.t1	XP_004512510.2	100	136	0	0	1	136	104	239	5.80E-64	253.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47573.t1	P68429	100.0	136	0	0	1	136	1	136	1.4e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47573.t1	A0A1S3TJX1	100.0	136	0	0	1	136	1	136	4.2e-64	253.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052308	MS.gene47573	0.813144	2.97E-51	-1.69E-46
MS.gene054551	MS.gene47573	0.833766	4.42E-56	-1.69E-46
MS.gene054593	MS.gene47573	0.839883	1.21E-57	-1.69E-46
MS.gene055308	MS.gene47573	0.824347	8.48E-54	-1.69E-46
MS.gene055578	MS.gene47573	0.820403	6.99E-53	-1.69E-46
MS.gene055957	MS.gene47573	0.862734	4.11E-64	-1.69E-46
MS.gene056041	MS.gene47573	0.851612	7.92E-61	-1.69E-46
MS.gene056335	MS.gene47573	0.817868	2.64E-52	-1.69E-46
MS.gene05640	MS.gene47573	0.84615	2.60E-59	-1.69E-46
MS.gene056528	MS.gene47573	0.803396	3.56E-49	-1.69E-46
MS.gene057458	MS.gene47573	0.841913	3.56E-58	-1.69E-46
MS.gene058128	MS.gene47573	0.844321	8.13E-59	-1.69E-46
MS.gene058853	MS.gene47573	0.82304	1.72E-53	-1.69E-46
MS.gene059616	MS.gene47573	0.800185	1.62E-48	-1.69E-46
MS.gene061099	MS.gene47573	0.836509	8.98E-57	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene000604	MS.gene47573	PPI
MS.gene24196	MS.gene47573	PPI
MS.gene58116	MS.gene47573	PPI
MS.gene47573	MS.gene32513	PPI
MS.gene47573	MS.gene05905	PPI
MS.gene030661	MS.gene47573	PPI
MS.gene47573	MS.gene64164	PPI
MS.gene61192	MS.gene47573	PPI
MS.gene47573	MS.gene41679	PPI
MS.gene28432	MS.gene47573	PPI
MS.gene79799	MS.gene47573	PPI
MS.gene88233	MS.gene47573	PPI
MS.gene89203	MS.gene47573	PPI
MS.gene47573	MS.gene26406	PPI
MS.gene068179	MS.gene47573	PPI
MS.gene97703	MS.gene47573	PPI
MS.gene06236	MS.gene47573	PPI
MS.gene95244	MS.gene47573	PPI
MS.gene47573	MS.gene027909	PPI
MS.gene94307	MS.gene47573	PPI
MS.gene91631	MS.gene47573	PPI
MS.gene021887	MS.gene47573	PPI
MS.gene009155	MS.gene47573	PPI
MS.gene47573	MS.gene018762	PPI
MS.gene52605	MS.gene47573	PPI
MS.gene020313	MS.gene47573	PPI
MS.gene070538	MS.gene47573	PPI
MS.gene98552	MS.gene47573	PPI
MS.gene78323	MS.gene47573	PPI
MS.gene39538	MS.gene47573	PPI
MS.gene066535	MS.gene47573	PPI
MS.gene47573	MS.gene030664	PPI
MS.gene78922	MS.gene47573	PPI
MS.gene071851	MS.gene47573	PPI
MS.gene47573	MS.gene94315	PPI
MS.gene28434	MS.gene47573	PPI
MS.gene016712	MS.gene47573	PPI
MS.gene47573	MS.gene47284	PPI
MS.gene47573	MS.gene55626	PPI
MS.gene47573	MS.gene61193	PPI
MS.gene47573	MS.gene069975	PPI
MS.gene057458	MS.gene47573	PPI
MS.gene47573	MS.gene78324	PPI
MS.gene47573	MS.gene017431	PPI
MS.gene47573	MS.gene70258	PPI
MS.gene059054	MS.gene47573	PPI
MS.gene47573	MS.gene65125	PPI
MS.gene44458	MS.gene47573	PPI
MS.gene014181	MS.gene47573	PPI
MS.gene47573	MS.gene056335	PPI
MS.gene47573	MS.gene58112	PPI
MS.gene47573	MS.gene011710	PPI
MS.gene47573	MS.gene29300	PPI
MS.gene47573	MS.gene072432	PPI
MS.gene47573	MS.gene23886	PPI
MS.gene60199	MS.gene47573	PPI
MS.gene068178	MS.gene47573	PPI
MS.gene013163	MS.gene47573	PPI
MS.gene47573	MS.gene89203	PPI
MS.gene32514	MS.gene47573	PPI
MS.gene053230	MS.gene47573	PPI
MS.gene064876	MS.gene47573	PPI
MS.gene47573	MS.gene63118	PPI
MS.gene028296	MS.gene47573	PPI
MS.gene29299	MS.gene47573	PPI
MS.gene042871	MS.gene47573	PPI
MS.gene04820	MS.gene47573	PPI
MS.gene66836	MS.gene47573	PPI
MS.gene072433	MS.gene47573	PPI
MS.gene68716	MS.gene47573	PPI
MS.gene030666	MS.gene47573	PPI
MS.gene47573	MS.gene60196	PPI
MS.gene47573	MS.gene29298	PPI
MS.gene066537	MS.gene47573	PPI
MS.gene47573	MS.gene34797	PPI
MS.gene97701	MS.gene47573	PPI
MS.gene47573	MS.gene46303	PPI
MS.gene60200	MS.gene47573	PPI
MS.gene47573	MS.gene64996	PPI
MS.gene36496	MS.gene47573	PPI
MS.gene47573	MS.gene26084	PPI
MS.gene049111	MS.gene47573	PPI
MS.gene027904	MS.gene47573	PPI
MS.gene47573	MS.gene78227	PPI
MS.gene47573	MS.gene063067	PPI
MS.gene00233	MS.gene47573	PPI
MS.gene70263	MS.gene47573	PPI
MS.gene29521	MS.gene47573	PPI
MS.gene47573	MS.gene066536	PPI
MS.gene44457	MS.gene47573	PPI
MS.gene47573	MS.gene03849	PPI
MS.gene68113	MS.gene47573	PPI
MS.gene47573	MS.gene35163	PPI
MS.gene66051	MS.gene47573	PPI
MS.gene034255	MS.gene47573	PPI
MS.gene011711	MS.gene47573	PPI
MS.gene87898	MS.gene47573	PPI
MS.gene47573	MS.gene78224	PPI
MS.gene65125	MS.gene47573	PPI
MS.gene64998	MS.gene47573	PPI
MS.gene47573	MS.gene81646	PPI
MS.gene29445	MS.gene47573	PPI
MS.gene046235	MS.gene47573	PPI
MS.gene26406	MS.gene47573	PPI
MS.gene47573	MS.gene66752	PPI
MS.gene82109	MS.gene47573	PPI
MS.gene47573	MS.gene70990	PPI
MS.gene47573	MS.gene24196	PPI
MS.gene47573	MS.gene28438	PPI
MS.gene015760	MS.gene47573	PPI
MS.gene055512	MS.gene47573	PPI
MS.gene58114	MS.gene47573	PPI
MS.gene47573	MS.gene70261	PPI
MS.gene47573	MS.gene066960	PPI
MS.gene024064	MS.gene47573	PPI
MS.gene78924	MS.gene47573	PPI
MS.gene58285	MS.gene47573	PPI
MS.gene25357	MS.gene47573	PPI
MS.gene07616	MS.gene47573	PPI
MS.gene47573	MS.gene033505	PPI
MS.gene47573	MS.gene072431	PPI
MS.gene47573	MS.gene58114	PPI
MS.gene038612	MS.gene47573	PPI
MS.gene47573	MS.gene04748	PPI
MS.gene47573	MS.gene50129	PPI
MS.gene027907	MS.gene47573	PPI
MS.gene067742	MS.gene47573	PPI
MS.gene78322	MS.gene47573	PPI
MS.gene47573	MS.gene49838	PPI
MS.gene014301	MS.gene47573	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47573.t1	MTR_7g059070	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_5g029820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_5g029770	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_4g065990	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_4g088150	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_2g035230	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_8g092720	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_8g063500	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_8g103245	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_8g092820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene47573.t1	MTR_7g013610	100.000	136	0	0	1	136	100	235	1.10e-95	275
MS.gene47573.t1	MTR_4g097175	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene47573.t1	MTR_1g023630	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene47573.t1	MTR_8g061940	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene47573.t1	MTR_8g099430	96.324	136	5	0	1	136	1	136	1.38e-92	264
MS.gene47573.t1	MTR_4g097170	96.324	136	5	0	1	136	42	177	2.29e-91	262
MS.gene47573.t1	MTR_2g082310	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene47573.t1	MTR_2g082340	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene47573.t1	MTR_2g082370	85.616	146	11	1	1	136	1	146	1.74e-82	238
MS.gene47573.t1	MTR_2g082400	84.559	136	19	2	1	135	1	135	6.38e-75	219
MS.gene47573.t1	MTR_7g013600	86.607	112	15	0	25	136	2	113	1.01e-65	195
MS.gene47573.t1	MTR_7g023830	67.164	134	43	1	1	134	1	133	6.48e-56	171
MS.gene47573.t1	MTR_1g023630	73.504	117	15	3	1	111	1	107	3.81e-52	160
MS.gene47573.t1	MTR_5g024630	67.241	116	35	2	1	116	1	113	1.63e-45	144
MS.gene47573.t1	MTR_7g023880	58.647	133	41	3	3	134	18	137	5.46e-43	139
MS.gene47573.t1	MTR_5g024530	68.182	110	12	2	19	128	68	154	4.56e-42	137
MS.gene47573.t1	MTR_0197s0100	100.000	66	0	0	1	66	1	66	1.45e-40	132
MS.gene47573.t1	MTR_8g027840	55.102	98	43	1	37	133	28	125	4.83e-30	105
MS.gene47573.t1	MTR_8g105150	53.846	91	10	1	37	127	11	69	1.43e-25	92.4
MS.gene47573.t1	MTR_8g092740	97.368	38	1	0	99	136	118	155	4.60e-20	80.9
MS.gene47573.t1	MTR_5g089120	76.190	42	10	0	82	123	6	47	6.07e-18	73.6
MS.gene47573.t1	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.76e-15	66.2
MS.gene47573.t1	MTR_4g128040	75.676	37	9	0	79	115	20	56	3.38e-15	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47573.t1	AT5G65360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene47573.t1	AT5G10390	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene47573.t1	AT5G10400	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene47573.t1	AT3G27360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene47573.t1	AT1G09200	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene47573.t1	AT5G10980	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene47573.t1	AT4G40030	97.059	136	4	0	1	136	29	164	6.76e-93	266
MS.gene47573.t1	AT5G65350	94.853	136	7	0	1	136	1	136	5.09e-91	260
MS.gene47573.t1	AT1G75600	93.382	136	9	0	1	136	1	136	1.20e-89	256
MS.gene47573.t1	AT1G13370	93.382	136	9	0	1	136	1	136	5.32e-89	254
MS.gene47573.t1	AT1G19890	89.781	137	13	1	1	136	1	137	1.03e-83	241
MS.gene47573.t1	AT5G12910	71.111	135	34	2	1	135	1	130	9.51e-67	198
MS.gene47573.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene47573.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene47573.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene47573.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110

Find 49 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAGAAACCTCACCGTTTC+AGG	0.224781	4.3:-25315894	MS.gene47573:CDS
TCACGGAGAGCGACGGTTCC+TGG	0.319730	4.3:+25315871	None:intergenic
TGAGGAGCTCAGTGCTCTTC+TGG	0.339681	4.3:+25315836	None:intergenic
AAGCCGACACGGCGGAGCTC+TGG	0.377718	4.3:+25315746	None:intergenic
TTCTTCACTCCGCCGGTGGC+CGG	0.393192	4.3:+25315910	None:intergenic
TTTGTGGCGAGTTGCTTCCT+TGG	0.400731	4.3:+25315952	None:intergenic
TTATCTCGTCGGTCTCTTTG+AGG	0.447224	4.3:-25315704	MS.gene47573:CDS
GGAAGGGGAGTTTGCGTATG+AGG	0.450631	4.3:+25315818	None:intergenic
CTTCCTTGGAGCTTTGCCAC+CGG	0.456245	4.3:+25315966	None:intergenic
CGCAAATCTGCTCCGGCCAC+CGG	0.457456	4.3:-25315922	MS.gene47573:CDS
AGTGACACGCTTAGCATGAA+TGG	0.474744	4.3:+25315666	None:intergenic
CCTTGGAGCTTTGCCACCGG+TGG	0.488901	4.3:+25315969	None:intergenic
CGCTTCTTGCAAAGCCGACA+CGG	0.492590	4.3:+25315735	None:intergenic
CGACGGTTCCTGGCCTGAAA+CGG	0.503357	4.3:+25315881	None:intergenic
GGCTTTGCAAGAAGCGGCCG+AGG	0.504571	4.3:-25315728	MS.gene47573:CDS
GGATTTGCGAGCGGTTTGCT+TGG	0.506530	4.3:+25315990	None:intergenic
CTAGCGAGCTGGATATCCTT+AGG	0.510191	4.3:+25315637	None:intergenic
AAACCTCACCGTTTCAGGCC+AGG	0.512079	4.3:-25315889	MS.gene47573:CDS
CACGGATACGCCTAGCGAGC+TGG	0.513784	4.3:+25315626	None:intergenic
TTTCCAGAGCTCCGCCGTGT+CGG	0.519570	4.3:-25315749	MS.gene47573:CDS
ACACGGCGGAGCTCTGGAAA+CGG	0.525377	4.3:+25315752	None:intergenic
AGCCGCTCGCAAATCTGCTC+CGG	0.526992	4.3:-25315929	MS.gene47573:CDS
CACGGACAAGACGCTGGAAG+GGG	0.529109	4.3:+25315803	None:intergenic
CTCACGGACAAGACGCTGGA+AGG	0.539901	4.3:+25315801	None:intergenic
GTGAGGTTTCTTCACTCCGC+CGG	0.553823	4.3:+25315903	None:intergenic
CTAAGGATATCCAGCTCGCT+AGG	0.554905	4.3:-25315636	MS.gene47573:CDS
GCGTGTCACTATCATGCCTA+AGG	0.557496	4.3:-25315653	MS.gene47573:CDS
TGAAATCCTGAGCGATCTCA+CGG	0.570370	4.3:+25315785	None:intergenic
TCTGGTACTTGCGGATCTCA+CGG	0.571857	4.3:+25315854	None:intergenic
CCACCGGTGGCAAAGCTCCA+AGG	0.572773	4.3:-25315969	MS.gene47573:CDS
CAGTGCTCTTCTGGTACTTG+CGG	0.579006	4.3:+25315845	None:intergenic
TCACGGACAAGACGCTGGAA+GGG	0.583031	4.3:+25315802	None:intergenic
AAATCTGCTCCGGCCACCGG+CGG	0.584127	4.3:-25315919	MS.gene47573:CDS
CGATCTCACGGACAAGACGC+TGG	0.585935	4.3:+25315797	None:intergenic
AGGTTTCTTCACTCCGCCGG+TGG	0.590490	4.3:+25315906	None:intergenic
TCTTGTCCGTGAGATCGCTC+AGG	0.603921	4.3:-25315791	MS.gene47573:CDS
GCGGCCGAGGCTTATCTCGT+CGG	0.608232	4.3:-25315715	MS.gene47573:CDS
CAAACCGCTCGCAAATCCAC+CGG	0.613586	4.3:-25315985	MS.gene47573:CDS
ACCGCTCGCAAATCCACCGG+TGG	0.632751	4.3:-25315982	MS.gene47573:CDS
AAGATCAAGCACGCTCGCCA+CGG	0.639365	4.3:+25315608	None:intergenic
GGCCGGAGCAGATTTGCGAG+CGG	0.640066	4.3:+25315927	None:intergenic
GCCACCGGTGGATTTGCGAG+CGG	0.642552	4.3:+25315981	None:intergenic
CGTGTCGGCTTTGCAAGAAG+CGG	0.647453	4.3:-25315734	MS.gene47573:CDS
GAGACCGACGAGATAAGCCT+CGG	0.653052	4.3:+25315711	None:intergenic
GCGGATCTCACGGAGAGCGA+CGG	0.662183	4.3:+25315864	None:intergenic
GTTCCTGGCCTGAAACGGTG+AGG	0.663103	4.3:+25315886	None:intergenic
CAGCTCGCTAGGCGTATCCG+TGG	0.667707	4.3:-25315625	MS.gene47573:CDS
GCTTAGCATGAATGGCGCAG+AGG	0.694649	4.3:+25315674	None:intergenic
TTCTTGCAAAGCCGACACGG+CGG	0.736453	4.3:+25315738	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGTGACACGCTTAGCATGAA+TGG	+	chr4.3:25315949-25315968	None:intergenic	45.0%
	TGAAATCCTGAGCGATCTCA+CGG	+	chr4.3:25315830-25315849	None:intergenic	45.0%
	TGAAGAAACCTCACCGTTTC+AGG	-	chr4.3:25315718-25315737	MS.gene47573:CDS	45.0%
	TTATCTCGTCGGTCTCTTTG+AGG	-	chr4.3:25315908-25315927	MS.gene47573:CDS	45.0%
	CAGTGCTCTTCTGGTACTTG+CGG	+	chr4.3:25315770-25315789	None:intergenic	50.0%
	CTAAGGATATCCAGCTCGCT+AGG	-	chr4.3:25315976-25315995	MS.gene47573:CDS	50.0%
	CTAGCGAGCTGGATATCCTT+AGG	+	chr4.3:25315978-25315997	None:intergenic	50.0%
	TCTGGTACTTGCGGATCTCA+CGG	+	chr4.3:25315761-25315780	None:intergenic	50.0%
	TTTGTGGCGAGTTGCTTCCT+TGG	+	chr4.3:25315663-25315682	None:intergenic	50.0%
!	AGATTTGCGAGCGGCTTTTG+TGG	+	chr4.3:25315679-25315698	None:intergenic	50.0%
!	GCGTGTCACTATCATGCCTA+AGG	-	chr4.3:25315959-25315978	MS.gene47573:CDS	50.0%
	AAACCTCACCGTTTCAGGCC+AGG	-	chr4.3:25315723-25315742	MS.gene47573:CDS	55.0%
	CAAACCGCTCGCAAATCCAC+CGG	-	chr4.3:25315627-25315646	MS.gene47573:CDS	55.0%
	CGCTTCTTGCAAAGCCGACA+CGG	+	chr4.3:25315880-25315899	None:intergenic	55.0%
	CTTCCTTGGAGCTTTGCCAC+CGG	+	chr4.3:25315649-25315668	None:intergenic	55.0%
	GAGACCGACGAGATAAGCCT+CGG	+	chr4.3:25315904-25315923	None:intergenic	55.0%
	GCTTAGCATGAATGGCGCAG+AGG	+	chr4.3:25315941-25315960	None:intergenic	55.0%
	GGAAGGGGAGTTTGCGTATG+AGG	+	chr4.3:25315797-25315816	None:intergenic	55.0%
	GTGAGGTTTCTTCACTCCGC+CGG	+	chr4.3:25315712-25315731	None:intergenic	55.0%
	TCACGGACAAGACGCTGGAA+GGG	+	chr4.3:25315813-25315832	None:intergenic	55.0%
	TCTTGTCCGTGAGATCGCTC+AGG	-	chr4.3:25315821-25315840	MS.gene47573:CDS	55.0%
	TGAGGAGCTCAGTGCTCTTC+TGG	+	chr4.3:25315779-25315798	None:intergenic	55.0%
	TTCTTGCAAAGCCGACACGG+CGG	+	chr4.3:25315877-25315896	None:intergenic	55.0%
!	GGATTTGCGAGCGGTTTGCT+TGG	+	chr4.3:25315625-25315644	None:intergenic	55.0%
!!	CGTGTCGGCTTTGCAAGAAG+CGG	-	chr4.3:25315878-25315897	MS.gene47573:CDS	55.0%
	AGCCGCTCGCAAATCTGCTC+CGG	-	chr4.3:25315683-25315702	MS.gene47573:CDS	60.0%
	AGGTTTCTTCACTCCGCCGG+TGG	+	chr4.3:25315709-25315728	None:intergenic	60.0%
	CACGGACAAGACGCTGGAAG+GGG	+	chr4.3:25315812-25315831	None:intergenic	60.0%
	CGACGGTTCCTGGCCTGAAA+CGG	+	chr4.3:25315734-25315753	None:intergenic	60.0%
	CGATCTCACGGACAAGACGC+TGG	+	chr4.3:25315818-25315837	None:intergenic	60.0%
	CTCACGGACAAGACGCTGGA+AGG	+	chr4.3:25315814-25315833	None:intergenic	60.0%
	GTTCCTGGCCTGAAACGGTG+AGG	+	chr4.3:25315729-25315748	None:intergenic	60.0%
	TTTCCAGAGCTCCGCCGTGT+CGG	-	chr4.3:25315863-25315882	MS.gene47573:CDS	60.0%
!!	ACACGGCGGAGCTCTGGAAA+CGG	+	chr4.3:25315863-25315882	None:intergenic	60.0%
	AAATCTGCTCCGGCCACCGG+CGG	-	chr4.3:25315693-25315712	MS.gene47573:CDS	65.0%
	ACCGCTCGCAAATCCACCGG+TGG	-	chr4.3:25315630-25315649	MS.gene47573:CDS	65.0%
	CACGGATACGCCTAGCGAGC+TGG	+	chr4.3:25315989-25316008	None:intergenic	65.0%
	CAGCTCGCTAGGCGTATCCG+TGG	-	chr4.3:25315987-25316006	MS.gene47573:CDS	65.0%
	CCACCGGTGGCAAAGCTCCA+AGG	-	chr4.3:25315643-25315662	MS.gene47573:CDS	65.0%
	CCTTGGAGCTTTGCCACCGG+TGG	+	chr4.3:25315646-25315665	None:intergenic	65.0%
	CGCAAATCTGCTCCGGCCAC+CGG	-	chr4.3:25315690-25315709	MS.gene47573:CDS	65.0%
	GCGGATCTCACGGAGAGCGA+CGG	+	chr4.3:25315751-25315770	None:intergenic	65.0%
	GCGGCCGAGGCTTATCTCGT+CGG	-	chr4.3:25315897-25315916	MS.gene47573:CDS	65.0%
	GGCCGGAGCAGATTTGCGAG+CGG	+	chr4.3:25315688-25315707	None:intergenic	65.0%
	GGCTTTGCAAGAAGCGGCCG+AGG	-	chr4.3:25315884-25315903	MS.gene47573:CDS	65.0%
	TCACGGAGAGCGACGGTTCC+TGG	+	chr4.3:25315744-25315763	None:intergenic	65.0%
	TTCTTCACTCCGCCGGTGGC+CGG	+	chr4.3:25315705-25315724	None:intergenic	65.0%
!	GCCACCGGTGGATTTGCGAG+CGG	+	chr4.3:25315634-25315653	None:intergenic	65.0%
	AAGCCGACACGGCGGAGCTC+TGG	+	chr4.3:25315869-25315888	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	25315612	25316022	25315612	ID=MS.gene47573
chr4.3	mRNA	25315612	25316022	25315612	ID=MS.gene47573.t1;Parent=MS.gene47573
chr4.3	exon	25315612	25316022	25315612	ID=MS.gene47573.t1.exon1;Parent=MS.gene47573.t1
chr4.3	CDS	25315612	25316022	25315612	ID=cds.MS.gene47573.t1;Parent=MS.gene47573.t1

Gene Sequence

>MS.gene47573

ATGGCACGTACCAAGCAAACCGCTCGCAAATCCACCGGTGGCAAAGCTCCAAGGAAGCAACTCGCCACAAAAGCCGCTCGCAAATCTGCTCCGGCCACCGGCGGAGTGAAGAAACCTCACCGTTTCAGGCCAGGAACCGTCGCTCTCCGTGAGATCCGCAAGTACCAGAAGAGCACTGAGCTCCTCATACGCAAACTCCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGATTTCAAGACTGATCTCCGTTTCCAGAGCTCCGCCGTGTCGGCTTTGCAAGAAGCGGCCGAGGCTTATCTCGTCGGTCTCTTTGAGGATACTAACCTCTGCGCCATTCATGCTAAGCGTGTCACTATCATGCCTAAGGATATCCAGCTCGCTAGGCGTATCCGTGGCGAGCGTGCTTGA

Protein sequence

>MS.gene47573.t1

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA