Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067742.t1 | APC23631.1 | 100 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 2.80E-63 | 251.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067742.t1 | Q642A5 | 40.4 | 104 | 54 | 3 | 1 | 101 | 1 | 99 | 1.5e-12 | 73.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067742.t1 | A0A1J0F5C9 | 100.0 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 2.0e-63 | 251.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067742.t1 | TF | NF-YB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067742.t1 | MTR_4g052950 | 93.571 | 140 | 3 | 1 | 1 | 134 | 1 | 140 | 7.44e-89 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067742.t1 | AT2G27470 | 69.231 | 91 | 28 | 0 | 4 | 94 | 8 | 98 | 2.56e-41 | 138 |
| MS.gene067742.t1 | AT3G53340 | 33.051 | 118 | 69 | 4 | 7 | 124 | 34 | 141 | 4.51e-11 | 57.8 |
| MS.gene067742.t1 | AT3G53340 | 33.051 | 118 | 69 | 4 | 7 | 124 | 34 | 141 | 4.51e-11 | 57.8 |
Find 35 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCTCCCTTTCCTTT+TGG | 0.216918 | 4.2:-49282392 | None:intergenic |
| CACACGGCGTACGATAGTTT+TGG | 0.288672 | 4.2:-49280947 | None:intergenic |
| GATGAAGATTCTGGCACTTT+CGG | 0.351884 | 4.2:-49281043 | None:intergenic |
| AAGGTAGTGGATGAAGATTC+TGG | 0.398524 | 4.2:-49281052 | None:intergenic |
| GAAGGCGAGCCGTCTGATAA+AGG | 0.409116 | 4.2:+49282434 | MS.gene067742:CDS |
| CAGAGTTTACTGAGTTTGTT+GGG | 0.413182 | 4.2:+49281633 | MS.gene067742:CDS |
| CCTCTAAAAGATTCTCTTGA+AGG | 0.437256 | 4.2:+49281656 | MS.gene067742:CDS |
| ACAGAGTTTACTGAGTTTGT+TGG | 0.451694 | 4.2:+49281632 | MS.gene067742:CDS |
| AGCGGCAGTGCCAAAAGGAA+AGG | 0.481373 | 4.2:+49282382 | MS.gene067742:CDS |
| GCAGGGCTAATGATATATGT+AGG | 0.482928 | 4.2:+49281555 | MS.gene067742:intron |
| AACGGCAATGTCGCCGTCGT+CGG | 0.485500 | 4.2:-49280995 | None:intergenic |
| ATCGACAATGGCTGAGGCGG+AGG | 0.486553 | 4.2:+49280918 | None:intergenic |
| TATCGTACGCCGTGTGGTGA+AGG | 0.496035 | 4.2:+49280954 | MS.gene067742:CDS |
| CTTACGTAGCGGAAAGGTAG+TGG | 0.497193 | 4.2:-49281065 | None:intergenic |
| GTCGCCGTCGTCGGAGCAAG+TGG | 0.510785 | 4.2:-49280986 | None:intergenic |
| GAGAAAATCGACAATGGCTG+AGG | 0.540596 | 4.2:+49280912 | None:intergenic |
| TGAGAAGGGAAAGAAAAGAA+AGG | 0.540607 | 4.2:+49282409 | MS.gene067742:CDS |
| AAAAGGAAAGGGAGATGAGA+AGG | 0.549945 | 4.2:+49282394 | MS.gene067742:CDS |
| CAGGGCTAATGATATATGTA+GGG | 0.556080 | 4.2:+49281556 | MS.gene067742:intron |
| AAGAAAGCGGCAGTGCCAAA+AGG | 0.559929 | 4.2:+49282377 | MS.gene067742:CDS |
| GCGGCAGTGCCAAAAGGAAA+GGG | 0.560436 | 4.2:+49282383 | MS.gene067742:CDS |
| AAAATCGACAATGGCTGAGG+CGG | 0.566675 | 4.2:+49280915 | None:intergenic |
| CTTTCCACTTGCTCCGACGA+CGG | 0.580800 | 4.2:+49280982 | MS.gene067742:CDS |
| AAAGGAAAGGGAGATGAGAA+GGG | 0.589156 | 4.2:+49282395 | MS.gene067742:CDS |
| CAAAACTATCGTACGCCGTG+TGG | 0.603664 | 4.2:+49280948 | MS.gene067742:CDS |
| GGAAAGAAAAGAAAGGCGGA+AGG | 0.603937 | 4.2:+49282416 | MS.gene067742:CDS |
| GAAGGGAAAGAAAAGAAAGG+CGG | 0.609576 | 4.2:+49282412 | MS.gene067742:CDS |
| AAGAAGAGCGTCTTTGTGAA+CGG | 0.610289 | 4.2:-49281013 | None:intergenic |
| GAGCCGTCTGATAAAGGTGA+TGG | 0.613636 | 4.2:+49282440 | MS.gene067742:CDS |
| CAAGCACTTACGTAGCGGAA+AGG | 0.621390 | 4.2:-49281071 | None:intergenic |
| CCACCATCACCTTTATCAGA+CGG | 0.625820 | 4.2:-49282443 | None:intergenic |
| AAAGAATGCTGGGAAGAAAG+CGG | 0.668115 | 4.2:+49282364 | MS.gene067742:CDS |
| CCGTCTGATAAAGGTGATGG+TGG | 0.675418 | 4.2:+49282443 | MS.gene067742:CDS |
| ATATATGTAGGGAGTCAAAG+AGG | 0.682246 | 4.2:+49281567 | MS.gene067742:CDS |
| AAAGCTTCTCCTTCACCACA+CGG | 0.706469 | 4.2:-49280963 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGAGGATAAAAATTA+GGG | + | chr4.2:49281363-49281382 | MS.gene067742:intron | 15.0% |
| !! | ACATCAAATTTATCAAATTA+GGG | - | chr4.2:49281143-49281162 | None:intergenic | 15.0% |
| !! | TAATAAAGAGGATAAAAATT+AGG | + | chr4.2:49281362-49281381 | MS.gene067742:intron | 15.0% |
| !!! | AAAATTTTACAATGGTTTTT+GGG | + | chr4.2:49281303-49281322 | MS.gene067742:intron | 15.0% |
| !!! | GAAAATTATGGTTTATATTT+TGG | + | chr4.2:49281269-49281288 | MS.gene067742:intron | 15.0% |
| !! | AAATTGAAACTTTGATTGTA+AGG | + | chr4.2:49281238-49281257 | MS.gene067742:intron | 20.0% |
| !! | GACATCAAATTTATCAAATT+AGG | - | chr4.2:49281144-49281163 | None:intergenic | 20.0% |
| !!! | AATTATGGTTTATATTTTGG+AGG | + | chr4.2:49281272-49281291 | MS.gene067742:intron | 20.0% |
| !!! | GAAAATTTTACAATGGTTTT+TGG | + | chr4.2:49281302-49281321 | MS.gene067742:intron | 20.0% |
| !!! | TATTTTTCTTTTCATTGCAA+TGG | + | chr4.2:49281824-49281843 | MS.gene067742:intron | 20.0% |
| ! | AATTATTTGTGCGCAAATTA+GGG | - | chr4.2:49281111-49281130 | None:intergenic | 25.0% |
| ! | TAATTATTTGTGCGCAAATT+AGG | - | chr4.2:49281112-49281131 | None:intergenic | 25.0% |
| ! | TCATGGGTGATTTAAAAAAT+GGG | + | chr4.2:49281332-49281351 | MS.gene067742:intron | 25.0% |
| ! | TTCATGGGTGATTTAAAAAA+TGG | + | chr4.2:49281331-49281350 | MS.gene067742:intron | 25.0% |
| !! | AATTGGGGAAATTTTGTAAT+GGG | + | chr4.2:49281185-49281204 | MS.gene067742:intron | 25.0% |
| !! | ATAAAAATGGGAACTTTTTG+AGG | + | chr4.2:49281493-49281512 | MS.gene067742:intron | 25.0% |
| !! | CAATTGGGAAAATTTTACAA+TGG | + | chr4.2:49281295-49281314 | MS.gene067742:intron | 25.0% |
| !! | TAATTGGGGAAATTTTGTAA+TGG | + | chr4.2:49281184-49281203 | MS.gene067742:intron | 25.0% |
| !!! | CATTTTAGAGTTACAATTCA+TGG | - | chr4.2:49281963-49281982 | None:intergenic | 25.0% |
| !!! | TTTATATTTTGGAGGCAATT+GGG | + | chr4.2:49281280-49281299 | MS.gene067742:intron | 25.0% |
| AAAAATTAGGGTTCGTAGTT+TGG | + | chr4.2:49281375-49281394 | MS.gene067742:intron | 30.0% | |
| AAATTAGGGTTTCAGATAGA+AGG | - | chr4.2:49281097-49281116 | None:intergenic | 30.0% | |
| AAGAGGAATGAAACTATTTG+TGG | + | chr4.2:49282158-49282177 | MS.gene067742:intron | 30.0% | |
| AAGGAAGGAGATGAAAATTA+TGG | + | chr4.2:49281257-49281276 | MS.gene067742:intron | 30.0% | |
| AATCCCCATTTAGTTGAAAA+TGG | + | chr4.2:49281894-49281913 | MS.gene067742:intron | 30.0% | |
| AGAGGAATGAAACTATTTGT+GGG | + | chr4.2:49282159-49282178 | MS.gene067742:intron | 30.0% | |
| AGTTTAGGAAAAAGAATGCT+GGG | + | chr4.2:49282354-49282373 | MS.gene067742:CDS | 30.0% | |
| ATCCCCATTTAGTTGAAAAT+GGG | + | chr4.2:49281895-49281914 | MS.gene067742:intron | 30.0% | |
| ATGGGAACTTTGTAATAAAG+AGG | + | chr4.2:49281350-49281369 | MS.gene067742:intron | 30.0% | |
| TCCTGGGTGATTATAAAAAT+GGG | + | chr4.2:49281481-49281500 | MS.gene067742:intron | 30.0% | |
| TGAAACTTTGATTGTAAGGA+AGG | + | chr4.2:49281242-49281261 | MS.gene067742:intron | 30.0% | |
| TGCAATGGAAGTTCAAAAAA+AGG | + | chr4.2:49281839-49281858 | MS.gene067742:intron | 30.0% | |
| TTATGCTACATAAACAAGTG+TGG | + | chr4.2:49282097-49282116 | MS.gene067742:intron | 30.0% | |
| TTCCTGGGTGATTATAAAAA+TGG | + | chr4.2:49281480-49281499 | MS.gene067742:intron | 30.0% | |
| ! | AACCCATTTTCAACTAAATG+GGG | - | chr4.2:49281900-49281919 | None:intergenic | 30.0% |
| ! | AATGGGGAAAATTTTGCATT+GGG | + | chr4.2:49281402-49281421 | MS.gene067742:intron | 30.0% |
| ! | CAACCCATTTTCAACTAAAT+GGG | - | chr4.2:49281901-49281920 | None:intergenic | 30.0% |
| ! | GAAAATTTTGCATTGGGTTT+TGG | + | chr4.2:49281408-49281427 | MS.gene067742:intron | 30.0% |
| ! | GCATAGAATAACTCAGTTTT+AGG | - | chr4.2:49282003-49282022 | None:intergenic | 30.0% |
| ! | TCTTTTTCCTAAACTCTGAT+AGG | - | chr4.2:49282349-49282368 | None:intergenic | 30.0% |
| ! | TGTCATTTGAGCAATCATTA+TGG | + | chr4.2:49281801-49281820 | MS.gene067742:intron | 30.0% |
| ! | TTTTTGACCTATCAGAGTTT+AGG | + | chr4.2:49282339-49282358 | MS.gene067742:intron | 30.0% |
| !! | GTCAAAAAGAAAAAGTGTCA+AGG | - | chr4.2:49282327-49282346 | None:intergenic | 30.0% |
| !! | GTTTATATTTTGGAGGCAAT+TGG | + | chr4.2:49281279-49281298 | MS.gene067742:intron | 30.0% |
| !! | TTGTGTTGTTTGTATTTGCA+GGG | + | chr4.2:49281538-49281557 | MS.gene067742:intron | 30.0% |
| !! | TTTGTGTTGTTTGTATTTGC+AGG | + | chr4.2:49281537-49281556 | MS.gene067742:intron | 30.0% |
| !!! | CAGTTTTAGGCTTTTAACAA+TGG | - | chr4.2:49281990-49282009 | None:intergenic | 30.0% |
| !!! | GGAAATTTTGTAATGGGTTT+TGG | + | chr4.2:49281191-49281210 | MS.gene067742:intron | 30.0% |
| !!! | TGTTATGACTGCTTTGTTTT+CGG | + | chr4.2:49281696-49281715 | MS.gene067742:intron | 30.0% |
| AAACAAAGCAGTCATAACAC+AGG | - | chr4.2:49281695-49281714 | None:intergenic | 35.0% | |
| AACAAAGCAGTCATAACACA+GGG | - | chr4.2:49281694-49281713 | None:intergenic | 35.0% | |
| AACTGAGTTATTCTATGCTC+TGG | + | chr4.2:49282005-49282024 | MS.gene067742:intron | 35.0% | |
| ACAGAGTTTACTGAGTTTGT+TGG | + | chr4.2:49281632-49281651 | MS.gene067742:CDS | 35.0% | |
| ATATATGTAGGGAGTCAAAG+AGG | + | chr4.2:49281567-49281586 | MS.gene067742:CDS | 35.0% | |
| ATGGAAGATATGATCTTGCT+TGG | + | chr4.2:49282058-49282077 | MS.gene067742:intron | 35.0% | |
| CAGGGCTAATGATATATGTA+GGG | + | chr4.2:49281556-49281575 | MS.gene067742:intron | 35.0% | |
| CCATTTAGTTGAAAATGGGT+TGG | + | chr4.2:49281899-49281918 | MS.gene067742:intron | 35.0% | |
| GAGTTTAGGAAAAAGAATGC+TGG | + | chr4.2:49282353-49282372 | MS.gene067742:intron | 35.0% | |
| GCTAGTGAGTAATATTTGGT+TGG | + | chr4.2:49282123-49282142 | MS.gene067742:intron | 35.0% | |
| GTCAGCTAGTGAGTAATATT+TGG | + | chr4.2:49282119-49282138 | MS.gene067742:intron | 35.0% | |
| TGAGAAGGGAAAGAAAAGAA+AGG | + | chr4.2:49282409-49282428 | MS.gene067742:CDS | 35.0% | |
| ! | CAATGGGGAAAATTTTGCAT+TGG | + | chr4.2:49281401-49281420 | MS.gene067742:intron | 35.0% |
| ! | CAGAGTTTACTGAGTTTGTT+GGG | + | chr4.2:49281633-49281652 | MS.gene067742:CDS | 35.0% |
| ! | CCAACCCATTTTCAACTAAA+TGG | - | chr4.2:49281902-49281921 | None:intergenic | 35.0% |
| ! | CCTCTAAAAGATTCTCTTGA+AGG | + | chr4.2:49281656-49281675 | MS.gene067742:CDS | 35.0% |
| ! | CCTTCAAGAGAATCTTTTAG+AGG | - | chr4.2:49281659-49281678 | None:intergenic | 35.0% |
| !! | AGAGTGAAGTGAAAGTATCA+TGG | + | chr4.2:49281770-49281789 | MS.gene067742:intron | 35.0% |
| !! | ATTCCCTTTTTGGAGGTAAT+TGG | + | chr4.2:49281168-49281187 | MS.gene067742:intron | 35.0% |
| !! | GATGTCTGAAATTCCCTTTT+TGG | + | chr4.2:49281158-49281177 | MS.gene067742:intron | 35.0% |
| !! | TCCCATTTTTATAATCACCC+AGG | - | chr4.2:49281485-49281504 | None:intergenic | 35.0% |
| !! | TGGCTATTTTGGAGGAAATT+GGG | + | chr4.2:49281428-49281447 | MS.gene067742:intron | 35.0% |
| !! | TTCCCTTTTTGGAGGTAATT+GGG | + | chr4.2:49281169-49281188 | MS.gene067742:intron | 35.0% |
| !! | TTGGCTATTTTGGAGGAAAT+TGG | + | chr4.2:49281427-49281446 | MS.gene067742:intron | 35.0% |
| !!! | AAATTGGGGAAGTTTTGTTG+TGG | + | chr4.2:49281443-49281462 | MS.gene067742:intron | 35.0% |
| !!! | AATTGGGGAAGTTTTGTTGT+GGG | + | chr4.2:49281444-49281463 | MS.gene067742:intron | 35.0% |
| !!! | GGTTTTTGGGATTGATTCAT+GGG | + | chr4.2:49281316-49281335 | MS.gene067742:intron | 35.0% |
| !!! | TGGTTTTTGGGATTGATTCA+TGG | + | chr4.2:49281315-49281334 | MS.gene067742:intron | 35.0% |
| AAAAGGAAAGGGAGATGAGA+AGG | + | chr4.2:49282394-49282413 | MS.gene067742:CDS | 40.0% | |
| AAAGAATGCTGGGAAGAAAG+CGG | + | chr4.2:49282364-49282383 | MS.gene067742:CDS | 40.0% | |
| AAAGGAAAGGGAGATGAGAA+GGG | + | chr4.2:49282395-49282414 | MS.gene067742:CDS | 40.0% | |
| AATTAGGGTTCGTAGTTTGG+AGG | + | chr4.2:49281378-49281397 | MS.gene067742:intron | 40.0% | |
| GAAGGGAAAGAAAAGAAAGG+CGG | + | chr4.2:49282412-49282431 | MS.gene067742:CDS | 40.0% | |
| GATGAAGATTCTGGCACTTT+CGG | - | chr4.2:49281046-49281065 | None:intergenic | 40.0% | |
| GCAGGGCTAATGATATATGT+AGG | + | chr4.2:49281555-49281574 | MS.gene067742:intron | 40.0% | |
| TCCCCAATTACCTCCAAAAA+GGG | - | chr4.2:49281174-49281193 | None:intergenic | 40.0% | |
| TCTTCCATCATGCTTAGAGT+TGG | - | chr4.2:49282046-49282065 | None:intergenic | 40.0% | |
| TGAACCAACTCTAAGCATGA+TGG | + | chr4.2:49282039-49282058 | MS.gene067742:intron | 40.0% | |
| TTCCCCAATTACCTCCAAAA+AGG | - | chr4.2:49281175-49281194 | None:intergenic | 40.0% | |
| ! | GTTGGTTCATAGCTACAAAG+AGG | + | chr4.2:49282141-49282160 | MS.gene067742:intron | 40.0% |
| ! | TTCTCATCTCCCTTTCCTTT+TGG | - | chr4.2:49282395-49282414 | None:intergenic | 40.0% |
| !! | AAGAAGAGCGTCTTTGTGAA+CGG | - | chr4.2:49281016-49281035 | None:intergenic | 40.0% |
| !! | AAGGTAGTGGATGAAGATTC+TGG | - | chr4.2:49281055-49281074 | None:intergenic | 40.0% |
| !! | GGCTATTTTGGAGGAAATTG+GGG | + | chr4.2:49281429-49281448 | MS.gene067742:intron | 40.0% |
| !! | GTCTGAAATTCCCTTTTTGG+AGG | + | chr4.2:49281161-49281180 | MS.gene067742:intron | 40.0% |
| !! | TCCCTTTTTGGAGGTAATTG+GGG | + | chr4.2:49281170-49281189 | MS.gene067742:intron | 40.0% |
| !!! | GCATTGGGTTTTGGCTATTT+TGG | + | chr4.2:49281417-49281436 | MS.gene067742:intron | 40.0% |
| !!! | GGAAGTTTTGTTGTGGGTTT+TGG | + | chr4.2:49281450-49281469 | MS.gene067742:intron | 40.0% |
| !!! | GGTTTTGGAGATTGATTCCT+GGG | + | chr4.2:49281465-49281484 | MS.gene067742:intron | 40.0% |
| !!! | TTGGGTTTTGGCTATTTTGG+AGG | + | chr4.2:49281420-49281439 | MS.gene067742:intron | 40.0% |
| AAAGCTTCTCCTTCACCACA+CGG | - | chr4.2:49280966-49280985 | None:intergenic | 45.0% | |
| CCACCATCACCTTTATCAGA+CGG | - | chr4.2:49282446-49282465 | None:intergenic | 45.0% | |
| GACCAATATCTGCCCTAACT+TGG | + | chr4.2:49282297-49282316 | MS.gene067742:intron | 45.0% | |
| GGAAAGAAAAGAAAGGCGGA+AGG | + | chr4.2:49282416-49282435 | MS.gene067742:CDS | 45.0% | |
| GTTCGTAGTTTGGAGGCAAT+GGG | + | chr4.2:49281385-49281404 | MS.gene067742:intron | 45.0% | |
| TGCCAAGTTAGGGCAGATAT+TGG | - | chr4.2:49282302-49282321 | None:intergenic | 45.0% | |
| TGTCAAGGTCTGCCAAGTTA+GGG | - | chr4.2:49282312-49282331 | None:intergenic | 45.0% | |
| TTCGTAGTTTGGAGGCAATG+GGG | + | chr4.2:49281386-49281405 | MS.gene067742:intron | 45.0% | |
| ! | ACACGGCGTACGATAGTTTT+GGG | - | chr4.2:49280949-49280968 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGAGATTGATTCC+TGG | + | chr4.2:49281464-49281483 | MS.gene067742:intron | 45.0% |
| AAGAAAGCGGCAGTGCCAAA+AGG | + | chr4.2:49282377-49282396 | MS.gene067742:CDS | 50.0% | |
| CAAAACTATCGTACGCCGTG+TGG | + | chr4.2:49280948-49280967 | MS.gene067742:CDS | 50.0% | |
| GAAGGCAAGCACTTACGTAG+CGG | - | chr4.2:49281079-49281098 | None:intergenic | 50.0% | |
| GAGCCGTCTGATAAAGGTGA+TGG | + | chr4.2:49282440-49282459 | MS.gene067742:CDS | 50.0% | |
| GGTTCGTAGTTTGGAGGCAA+TGG | + | chr4.2:49281384-49281403 | MS.gene067742:intron | 50.0% | |
| GTGTCAAGGTCTGCCAAGTT+AGG | - | chr4.2:49282313-49282332 | None:intergenic | 50.0% | |
| ! | CAAGCACTTACGTAGCGGAA+AGG | - | chr4.2:49281074-49281093 | None:intergenic | 50.0% |
| ! | CACACGGCGTACGATAGTTT+TGG | - | chr4.2:49280950-49280969 | None:intergenic | 50.0% |
| ! | CCGTCTGATAAAGGTGATGG+TGG | + | chr4.2:49282443-49282462 | MS.gene067742:CDS | 50.0% |
| ! | CTTACGTAGCGGAAAGGTAG+TGG | - | chr4.2:49281068-49281087 | None:intergenic | 50.0% |
| AGCGGCAGTGCCAAAAGGAA+AGG | + | chr4.2:49282382-49282401 | MS.gene067742:CDS | 55.0% | |
| CTTTCCACTTGCTCCGACGA+CGG | + | chr4.2:49280982-49281001 | MS.gene067742:CDS | 55.0% | |
| GAAGGCGAGCCGTCTGATAA+AGG | + | chr4.2:49282434-49282453 | MS.gene067742:CDS | 55.0% | |
| GCGGCAGTGCCAAAAGGAAA+GGG | + | chr4.2:49282383-49282402 | MS.gene067742:CDS | 55.0% | |
| TATCGTACGCCGTGTGGTGA+AGG | + | chr4.2:49280954-49280973 | MS.gene067742:CDS | 55.0% | |
| AACGGCAATGTCGCCGTCGT+CGG | - | chr4.2:49280998-49281017 | None:intergenic | 60.0% | |
| GTCGCCGTCGTCGGAGCAAG+TGG | - | chr4.2:49280989-49281008 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 49280925 | 49282481 | 49280925 | ID=MS.gene067742 |
| chr4.2 | mRNA | 49280925 | 49282481 | 49280925 | ID=MS.gene067742.t1;Parent=MS.gene067742 |
| chr4.2 | exon | 49280925 | 49281082 | 49280925 | ID=MS.gene067742.t1.exon1;Parent=MS.gene067742.t1 |
| chr4.2 | CDS | 49280925 | 49281082 | 49280925 | ID=cds.MS.gene067742.t1;Parent=MS.gene067742.t1 |
| chr4.2 | exon | 49281559 | 49281677 | 49281559 | ID=MS.gene067742.t1.exon2;Parent=MS.gene067742.t1 |
| chr4.2 | CDS | 49281559 | 49281677 | 49281559 | ID=cds.MS.gene067742.t1;Parent=MS.gene067742.t1 |
| chr4.2 | exon | 49282354 | 49282481 | 49282354 | ID=MS.gene067742.t1.exon3;Parent=MS.gene067742.t1 |
| chr4.2 | CDS | 49282354 | 49282481 | 49282354 | ID=cds.MS.gene067742.t1;Parent=MS.gene067742.t1 |
| Gene Sequence |
| Protein sequence |