Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08919.t1 | RHN42372.1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.60E-296 | 1028.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08919.t1 | A0JMW6 | 23.6 | 254 | 173 | 6 | 263 | 513 | 205 | 440 | 3.3e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08919.t1 | A0A396GMQ1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.2e-296 | 1028.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene08919 | -0.838361 | 3.01E-57 | -1.69E-46 |
| MS.gene049180 | MS.gene08919 | 0.871516 | 6.44E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene08919 | -0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene08919 | 0.817187 | 3.75E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene08919 | 0.849945 | 2.33E-60 | -1.69E-46 |
| MS.gene050129 | MS.gene08919 | 0.808383 | 3.18E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene08919 | -0.841899 | 3.59E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene08919 | -0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene08919 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene050479 | MS.gene08919 | 0.805527 | 1.28E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene08919 | -0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene08919 | -0.837155 | 6.14E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene08919 | -0.841034 | 6.07E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene08919 | -0.801987 | 6.95E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene08919 | -0.818102 | 2.34E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene08919 | -0.802154 | 6.42E-49 | -1.69E-46 |
| MS.gene050818 | MS.gene08919 | 0.81321 | 2.87E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene08919 | -0.841475 | 4.65E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene08919 | -0.840939 | 6.43E-58 | -1.69E-46 |
| MS.gene050883 | MS.gene08919 | 0.808043 | 3.76E-50 | -1.69E-46 |
| MS.gene050937 | MS.gene08919 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene08919 | -0.807551 | 4.78E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene08919 | 0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene08919 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene08919 | 0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene051973 | MS.gene08919 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene052015 | MS.gene08919 | 0.884437 | 1.92E-71 | -1.69E-46 |
| MS.gene052164 | MS.gene08919 | -0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene08919 | -0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene08919 | -0.810399 | 1.18E-50 | -1.69E-46 |
| MS.gene052494 | MS.gene08919 | 0.856971 | 2.24E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene08919 | -0.842568 | 2.39E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene08919 | -0.849307 | 3.52E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene08919 | -0.854233 | 1.41E-61 | -1.69E-46 |
| MS.gene053097 | MS.gene08919 | 0.858147 | 1.01E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene08919 | -0.855275 | 7.04E-62 | -1.69E-46 |
| MS.gene053549 | MS.gene08919 | 0.835471 | 1.65E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene08919 | -0.809064 | 2.28E-50 | -1.69E-46 |
| MS.gene054344 | MS.gene08919 | -0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene08919 | 0.819195 | 1.32E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene08919 | -0.881044 | 3.33E-70 | -1.69E-46 |
| MS.gene054954 | MS.gene08919 | -0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene054959 | MS.gene08919 | 0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene08919 | -0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene08919 | -0.833126 | 6.38E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene08919 | -0.85208 | 5.84E-61 | -1.69E-46 |
| MS.gene055719 | MS.gene08919 | 0.874525 | 6.31E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene08919 | -0.856588 | 2.91E-62 | -1.69E-46 |
| MS.gene056310 | MS.gene08919 | 0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene08919 | 0.806907 | 6.55E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene08919 | -0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene08919 | -0.809672 | 1.69E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene08919 | 0.818366 | 2.04E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene08919 | -0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene056988 | MS.gene08919 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene08919 | 0.831983 | 1.22E-55 | -1.69E-46 |
| MS.gene057081 | MS.gene08919 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene05726 | MS.gene08919 | 0.827662 | 1.38E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene08919 | -0.811738 | 6.02E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene08919 | -0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene08919 | 0.829261 | 5.68E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene08919 | -0.847775 | 9.34E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene08919 | -0.854394 | 1.27E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene08919 | -0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene08919 | -0.817296 | 3.55E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene08919 | -0.843926 | 1.04E-58 | -1.69E-46 |
| MS.gene059103 | MS.gene08919 | 0.864183 | 1.46E-64 | -1.69E-46 |
| MS.gene05914 | MS.gene08919 | -0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene059303 | MS.gene08919 | -0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene059480 | MS.gene08919 | 0.872859 | 2.30E-67 | -1.69E-46 |
| MS.gene05960 | MS.gene08919 | 0.810065 | 1.39E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene08919 | -0.801088 | 1.06E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene08919 | -0.811742 | 6.01E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene08919 | -0.805346 | 1.40E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene08919 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene08919 | -0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene060187 | MS.gene08919 | 0.813485 | 2.50E-51 | -1.69E-46 |
| MS.gene06027 | MS.gene08919 | -0.820541 | 6.49E-53 | -1.69E-46 |
| MS.gene060358 | MS.gene08919 | 0.810826 | 9.50E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene08919 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene08919 | -0.818765 | 1.65E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene08919 | -0.802649 | 5.08E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene08919 | -0.861995 | 6.93E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene08919 | -0.824536 | 7.65E-54 | -1.69E-46 |
| MS.gene061044 | MS.gene08919 | 0.824622 | 7.31E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08919.t1 | AT1G23170 | 60.109 | 549 | 201 | 7 | 17 | 549 | 15 | 561 | 0.0 | 628 |
| MS.gene08919.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08919.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08919.t1 | AT1G23170 | 55.191 | 549 | 182 | 8 | 17 | 549 | 15 | 515 | 0.0 | 541 |
| MS.gene08919.t1 | AT3G11880 | 48.571 | 455 | 198 | 13 | 111 | 549 | 3 | 437 | 1.57e-125 | 377 |
| MS.gene08919.t1 | AT3G11880 | 50.000 | 432 | 187 | 12 | 134 | 549 | 3 | 421 | 2.42e-124 | 374 |
| MS.gene08919.t1 | AT3G11880 | 50.729 | 343 | 141 | 9 | 111 | 442 | 3 | 328 | 1.92e-99 | 306 |
| MS.gene08919.t1 | AT3G11880 | 48.000 | 300 | 128 | 9 | 111 | 399 | 3 | 285 | 7.65e-75 | 241 |
Find 158 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTCTGCTTTGGTCTT+TGG | 0.139887 | 4.4:-17345064 | MS.gene08919:CDS |
| TCTCAGTTGGTTTGTATTCT+TGG | 0.158367 | 4.4:-17343613 | MS.gene08919:CDS |
| ATGCGGTTTGCGGATTATTT+TGG | 0.187926 | 4.4:-17346189 | MS.gene08919:CDS |
| CTACCCCAACATGGAATCTT+TGG | 0.234838 | 4.4:-17342298 | MS.gene08919:CDS |
| CCCTAAAGCACGGGCTGTTT+TGG | 0.242352 | 4.4:-17343409 | MS.gene08919:CDS |
| CTCTCTCAGAATGGGATATA+TGG | 0.269677 | 4.4:+17343177 | None:intergenic |
| CCAAAACAGCCCGTGCTTTA+GGG | 0.272787 | 4.4:+17343409 | None:intergenic |
| TTCCTTGGGTGAAATTGTTC+AGG | 0.284035 | 4.4:-17346134 | MS.gene08919:CDS |
| CACTTAGTTCCTTTCTGCTT+TGG | 0.285709 | 4.4:-17345071 | MS.gene08919:CDS |
| ACCAAAACAGCCCGTGCTTT+AGG | 0.295717 | 4.4:+17343408 | None:intergenic |
| TGTTTCATTGCTTTACTTCC+AGG | 0.297609 | 4.4:+17343136 | None:intergenic |
| AACCCTTGGTCACAGTTTGC+TGG | 0.323214 | 4.4:+17345016 | None:intergenic |
| CAACCCGCAATCCAGGGATT+TGG | 0.335667 | 4.4:-17343552 | MS.gene08919:CDS |
| TCAGCGCTGCTCAGTTTCCT+TGG | 0.337666 | 4.4:-17346149 | MS.gene08919:CDS |
| ACCTTAGGTTTCTTCACCTT+TGG | 0.337808 | 4.4:+17346437 | None:intergenic |
| GTGGCTCTTGGCGGTTCTCC+TGG | 0.348034 | 4.4:-17343154 | MS.gene08919:CDS |
| AAATCCAAAGATTCCATGTT+GGG | 0.364480 | 4.4:+17342294 | None:intergenic |
| GTTGAAGGTGAGTTTGTTAC+CGG | 0.374708 | 4.4:+17346679 | None:intergenic |
| AAACCAAATCCCTGGATTGC+GGG | 0.379701 | 4.4:+17343549 | None:intergenic |
| TGTGACCAAGGGTTCCAAAA+AGG | 0.391826 | 4.4:-17345007 | MS.gene08919:CDS |
| GCTTGTAGCATTCAGTGCTT+TGG | 0.393155 | 4.4:+17342911 | None:intergenic |
| TATTCTCGAATGCTCAGAAC+TGG | 0.397435 | 4.4:+17342244 | None:intergenic |
| AGCAGCGTCGTTTCCGTTGA+AGG | 0.401884 | 4.4:+17346664 | None:intergenic |
| TAATAAGAGCATCAGGCTTT+CGG | 0.411863 | 4.4:+17343872 | None:intergenic |
| GCTTCCGCCACCGTCACCTT+AGG | 0.420485 | 4.4:+17346422 | None:intergenic |
| GATCGCTGCTTCGATCTAAC+TGG | 0.421839 | 4.4:+17346554 | None:intergenic |
| CAGCGCTGCTCAGTTTCCTT+GGG | 0.422296 | 4.4:-17346148 | MS.gene08919:CDS |
| GGGAGATCCTAAAGAACTTT+AGG | 0.423156 | 4.4:-17342598 | MS.gene08919:CDS |
| CCTATAGTGGTTAGCAAAAG+TGG | 0.424512 | 4.4:-17343575 | MS.gene08919:CDS |
| GTGGGAGATGGATCCGGAGG+GGG | 0.426014 | 4.4:+17346805 | None:intergenic |
| GAAGATTGATGCAGCTGATC+TGG | 0.427235 | 4.4:-17346393 | MS.gene08919:CDS |
| AAAGTGGCAACCCGCAATCC+AGG | 0.430699 | 4.4:-17343559 | MS.gene08919:CDS |
| CAAGTCGCTTGAGTTGCATT+CGG | 0.432376 | 4.4:-17346639 | MS.gene08919:CDS |
| TACTGTATTGCCCAAATTGA+GGG | 0.436105 | 4.4:-17343851 | MS.gene08919:CDS |
| CCTAAAGAACTTTAGGCAAA+AGG | 0.442468 | 4.4:-17342591 | MS.gene08919:intron |
| ATCTCCCTGAGTGGCTCATA+AGG | 0.444202 | 4.4:+17342614 | None:intergenic |
| GATGATGATGTGGATCGGTC+AGG | 0.450841 | 4.4:-17346500 | MS.gene08919:CDS |
| TGAGGCGAGGACTGCGGCGG+AGG | 0.454431 | 4.4:-17346594 | MS.gene08919:CDS |
| GGCGGTGTGGGAGATGGATC+CGG | 0.460314 | 4.4:+17346799 | None:intergenic |
| ACAAGTAACTTCAAAATCTC+AGG | 0.462196 | 4.4:-17344977 | MS.gene08919:intron |
| CTCACGGCGCCGATCACGGC+TGG | 0.463140 | 4.4:-17346760 | MS.gene08919:CDS |
| GACCTTCTGCCAGCCGTGAT+CGG | 0.468288 | 4.4:+17346751 | None:intergenic |
| GGTGAGTTTGTTACCGGTAC+CGG | 0.468566 | 4.4:+17346685 | None:intergenic |
| GCACTGAATGCTACAAGCTA+TGG | 0.469110 | 4.4:-17342906 | MS.gene08919:CDS |
| CTGAGAGAGGTGGCTCTTGG+CGG | 0.469550 | 4.4:-17343163 | MS.gene08919:CDS |
| ATTGATTCCTCCTCCAGCAT+TGG | 0.470236 | 4.4:-17343358 | MS.gene08919:CDS |
| TCAGTAGGAGATCTCTCAGT+TGG | 0.471593 | 4.4:-17343626 | MS.gene08919:CDS |
| GGACAGTATTCTTACTGACT+TGG | 0.473081 | 4.4:-17345043 | MS.gene08919:CDS |
| TGTGGGAGATGGATCCGGAG+GGG | 0.474914 | 4.4:+17346804 | None:intergenic |
| GTGGATCGGTCAGGGGAGAA+TGG | 0.475403 | 4.4:-17346491 | MS.gene08919:CDS |
| ACCTTTACTCTAGCTGAAGA+TGG | 0.476260 | 4.4:+17343309 | None:intergenic |
| AATACAGTAATAAGAGCATC+AGG | 0.478128 | 4.4:+17343865 | None:intergenic |
| CGCTTGCTACAATGTTCTCC+TGG | 0.480089 | 4.4:+17342693 | None:intergenic |
| CGGATCAAAGTTTCCAATGC+TGG | 0.481600 | 4.4:+17343345 | None:intergenic |
| GTTAACGGTGCTGTAAGAAA+AGG | 0.482437 | 4.4:-17343387 | MS.gene08919:CDS |
| ACCGTGCTTGCTGTGGCTGT+TGG | 0.484447 | 4.4:-17342333 | MS.gene08919:CDS |
| TTACTGTATTGCCCAAATTG+AGG | 0.486297 | 4.4:-17343852 | MS.gene08919:CDS |
| AAGAGCCACCTCTCTCAGAA+TGG | 0.486370 | 4.4:+17343168 | None:intergenic |
| ATTCTGAGAGAGGTGGCTCT+TGG | 0.487210 | 4.4:-17343166 | MS.gene08919:CDS |
| GGAAGAGTTTCACGAGGCCA+TGG | 0.488867 | 4.4:-17342378 | MS.gene08919:CDS |
| TAGCCAGCAAACTGTGACCA+AGG | 0.494511 | 4.4:-17345019 | MS.gene08919:CDS |
| GCGGAATCTCCTACCTATAG+TGG | 0.495190 | 4.4:-17343588 | MS.gene08919:CDS |
| AGATTCGGCGGTGTGGGAGA+TGG | 0.497613 | 4.4:+17346793 | None:intergenic |
| GCTGCTTCTTTCGATACTCC+AGG | 0.497984 | 4.4:+17342958 | None:intergenic |
| TGAGCAGGAGAAAGTTTACC+AGG | 0.499942 | 4.4:-17342711 | MS.gene08919:intron |
| GCAACCATCCATACAATCAC+TGG | 0.500036 | 4.4:+17343796 | None:intergenic |
| TCCTTGGGTGAAATTGTTCA+GGG | 0.500312 | 4.4:-17346133 | MS.gene08919:CDS |
| AAGCAGCTTCTATTGCACTT+TGG | 0.504270 | 4.4:-17342942 | MS.gene08919:CDS |
| AAGGAAGCTAACGGCGTCGC+CGG | 0.508318 | 4.4:-17346704 | MS.gene08919:CDS |
| GATACAGATGATGCGGTTTG+CGG | 0.509299 | 4.4:-17346199 | MS.gene08919:CDS |
| GTCTCAGATATGTGAGAAAG+TGG | 0.510412 | 4.4:+17345141 | None:intergenic |
| AGAGCCACCTCTCTCAGAAT+GGG | 0.511188 | 4.4:+17343169 | None:intergenic |
| CTTCTTATGCTTCTTCGCGT+AGG | 0.511297 | 4.4:+17346727 | None:intergenic |
| AATTTCGCTATCATAGCAGC+AGG | 0.515210 | 4.4:-17343094 | MS.gene08919:CDS |
| GGTGTGGGAGATGGATCCGG+AGG | 0.515556 | 4.4:+17346802 | None:intergenic |
| TGTCTCCTTATGAGCCACTC+AGG | 0.516916 | 4.4:-17342619 | MS.gene08919:CDS |
| AAATATTGCAAGATAATCTC+AGG | 0.519787 | 4.4:-17342399 | MS.gene08919:CDS |
| CCTTTACTCTAGCTGAAGAT+GGG | 0.524391 | 4.4:+17343310 | None:intergenic |
| GATTGTATGGATGGTTGCTC+AGG | 0.525541 | 4.4:-17343791 | MS.gene08919:intron |
| GGAGTTAGATTCGGCGGTGT+GGG | 0.527264 | 4.4:+17346787 | None:intergenic |
| CAGAAAGGAACTAAGTGCCT+CGG | 0.527844 | 4.4:+17345077 | None:intergenic |
| ACCAACAGCCACAGCAAGCA+CGG | 0.529034 | 4.4:+17342332 | None:intergenic |
| CGCGAAGAAGCATAAGAAGA+AGG | 0.529676 | 4.4:-17346723 | MS.gene08919:CDS |
| TATACAAGACATCAGTTGAC+TGG | 0.531046 | 4.4:-17345116 | MS.gene08919:CDS |
| ATGATGATGTGGATCGGTCA+GGG | 0.531980 | 4.4:-17346499 | MS.gene08919:CDS |
| AAAAGCTGAAGAGGTGAAGA+AGG | 0.533059 | 4.4:-17346468 | MS.gene08919:CDS |
| AAGCTGCAAAACCAAATCCC+TGG | 0.534627 | 4.4:+17343541 | None:intergenic |
| GTGTGGGAGATGGATCCGGA+GGG | 0.536705 | 4.4:+17346803 | None:intergenic |
| AGAAAGGAACTAAGTGCCTC+GGG | 0.536775 | 4.4:+17345078 | None:intergenic |
| GCTAACGGCGTCGCCGGTAC+CGG | 0.537790 | 4.4:-17346698 | MS.gene08919:CDS |
| CGCCGATCACGGCTGGCAGA+AGG | 0.538888 | 4.4:-17346753 | MS.gene08919:CDS |
| GTGAGATGAGGAGTTAGATT+CGG | 0.541523 | 4.4:+17346778 | None:intergenic |
| GACAGTATTCTTACTGACTT+GGG | 0.542880 | 4.4:-17345042 | MS.gene08919:CDS |
| TCATCTCACGGCGCCGATCA+CGG | 0.544498 | 4.4:-17346764 | MS.gene08919:CDS |
| CCCATCTTCAGCTAGAGTAA+AGG | 0.544992 | 4.4:-17343310 | MS.gene08919:intron |
| TGCATTCGGAGGATCGGAGA+AGG | 0.547304 | 4.4:-17346625 | MS.gene08919:CDS |
| AATATTTGTTGCTTTAGCGT+TGG | 0.547458 | 4.4:-17343902 | MS.gene08919:CDS |
| TTGGTTTGTATTCTTGGTCG+CGG | 0.548699 | 4.4:-17343607 | MS.gene08919:CDS |
| GGTAACAAACTCACCTTCAA+CGG | 0.548782 | 4.4:-17346677 | MS.gene08919:CDS |
| AAAGTTTCCAATGCTGGAGG+AGG | 0.556105 | 4.4:+17343351 | None:intergenic |
| TTTGTCCACCCCTAAAGCAC+GGG | 0.556433 | 4.4:-17343418 | MS.gene08919:CDS |
| GACCTTTACCGTGCTTGCTG+TGG | 0.557982 | 4.4:-17342340 | MS.gene08919:CDS |
| GAAATCCAAAGATTCCATGT+TGG | 0.561519 | 4.4:+17342293 | None:intergenic |
| ACAGGCTACAGAAAGATTTG+AGG | 0.563848 | 4.4:-17343200 | MS.gene08919:intron |
| TTGAGTTGCATTCGGAGGAT+CGG | 0.568593 | 4.4:-17346631 | MS.gene08919:CDS |
| CACTGAATGCTACAAGCTAT+GGG | 0.569907 | 4.4:-17342905 | MS.gene08919:intron |
| CAAAACAGCCCGTGCTTTAG+GGG | 0.574054 | 4.4:+17343410 | None:intergenic |
| GGCATCGTTTGAGCAGAATG+AGG | 0.575026 | 4.4:-17346223 | MS.gene08919:CDS |
| AAAACCAAATCCCTGGATTG+CGG | 0.578328 | 4.4:+17343548 | None:intergenic |
| AGCCACAGCAAGCACGGTAA+AGG | 0.579436 | 4.4:+17342338 | None:intergenic |
| GCTATCATAGCAGCAGGAGA+AGG | 0.581836 | 4.4:-17343088 | MS.gene08919:intron |
| ACTCCCAGTGATTGTATGGA+TGG | 0.582697 | 4.4:-17343800 | MS.gene08919:CDS |
| GAAACCTAAGGTGACGGTGG+CGG | 0.583163 | 4.4:-17346426 | MS.gene08919:CDS |
| ATCTATGTGCAGGCTTCAGT+AGG | 0.583240 | 4.4:-17343641 | MS.gene08919:intron |
| AGGAGTTAGATTCGGCGGTG+TGG | 0.588248 | 4.4:+17346786 | None:intergenic |
| GTCCAAAGACCAAAGCAGAA+AGG | 0.592435 | 4.4:+17345062 | None:intergenic |
| GAAGAGTTTCACGAGGCCAT+GGG | 0.594706 | 4.4:-17342377 | MS.gene08919:CDS |
| GGAGAATGGAAAAGCTGAAG+AGG | 0.595415 | 4.4:-17346477 | MS.gene08919:CDS |
| AACAGCCCGTGCTTTAGGGG+TGG | 0.598573 | 4.4:+17343413 | None:intergenic |
| GTCGCTTGAGTTGCATTCGG+AGG | 0.598827 | 4.4:-17346636 | MS.gene08919:CDS |
| CATATATCCCATTCTGAGAG+AGG | 0.602504 | 4.4:-17343176 | MS.gene08919:CDS |
| ACATCAACAATCTTAGCCAC+AGG | 0.603144 | 4.4:+17346105 | None:intergenic |
| CAACCATCCATACAATCACT+GGG | 0.608838 | 4.4:+17343797 | None:intergenic |
| GAAGGAAAATTCTTGAGGCG+AGG | 0.609341 | 4.4:-17346607 | MS.gene08919:CDS |
| AAGTGGCAACCCGCAATCCA+GGG | 0.609912 | 4.4:-17343558 | MS.gene08919:CDS |
| GTCTCCTTATGAGCCACTCA+GGG | 0.610196 | 4.4:-17342618 | MS.gene08919:CDS |
| GTGATCGGCGCCGTGAGATG+AGG | 0.611262 | 4.4:+17346766 | None:intergenic |
| GCGGAGGCTGAATTTGATGA+TGG | 0.617872 | 4.4:-17346578 | MS.gene08919:CDS |
| TCCCTGAACAATTTCACCCA+AGG | 0.618599 | 4.4:+17346132 | None:intergenic |
| CGATGAAGACGATGATGATG+TGG | 0.624368 | 4.4:-17346510 | MS.gene08919:CDS |
| ATTCTCGAATGCTCAGAACT+GGG | 0.627893 | 4.4:+17342245 | None:intergenic |
| TCTTGAGGCGAGGACTGCGG+CGG | 0.630323 | 4.4:-17346597 | MS.gene08919:CDS |
| CTTTACTCTAGCTGAAGATG+GGG | 0.634564 | 4.4:+17343311 | None:intergenic |
| TGATGATGTGGATCGGTCAG+GGG | 0.634863 | 4.4:-17346498 | MS.gene08919:CDS |
| TTTACTCTAGCTGAAGATGG+GGG | 0.635009 | 4.4:+17343312 | None:intergenic |
| CAGTTGACTGGATCAATCGT+CGG | 0.638176 | 4.4:-17345104 | MS.gene08919:CDS |
| GAATCTAACTCCTCATCTCA+CGG | 0.640221 | 4.4:-17346776 | MS.gene08919:CDS |
| ACCAAAGGTGAAGAAACCTA+AGG | 0.640238 | 4.4:-17346438 | MS.gene08919:CDS |
| AATCCAAAGATTCCATGTTG+GGG | 0.642323 | 4.4:+17342295 | None:intergenic |
| ATCAAAGTTTCCAATGCTGG+AGG | 0.642389 | 4.4:+17343348 | None:intergenic |
| GATCAATCGTCGGTCTCCCG+AGG | 0.644658 | 4.4:-17345094 | MS.gene08919:CDS |
| TTCTTTAGGATCTCCCTGAG+TGG | 0.645060 | 4.4:+17342605 | None:intergenic |
| AATTCTTGAGGCGAGGACTG+CGG | 0.646090 | 4.4:-17346600 | MS.gene08919:CDS |
| CATAAGAAGAAGGAAGCTAA+CGG | 0.647003 | 4.4:-17346713 | MS.gene08919:CDS |
| AGCCAGCAAACTGTGACCAA+GGG | 0.647478 | 4.4:-17345018 | MS.gene08919:CDS |
| TGTATTGCCCAAATTGAGGG+AGG | 0.648811 | 4.4:-17343848 | MS.gene08919:CDS |
| GAAGAAGGTTAAGAAACCAA+AGG | 0.649224 | 4.4:-17346453 | MS.gene08919:CDS |
| TCGGAGAAGGAAAATTCTTG+AGG | 0.649487 | 4.4:-17346612 | MS.gene08919:CDS |
| ATGAGGAGATACAGATGATG+CGG | 0.649967 | 4.4:-17346206 | MS.gene08919:CDS |
| ATATCCCATTCTGAGAGAGG+TGG | 0.657382 | 4.4:-17343173 | MS.gene08919:CDS |
| GGTGAAGAAACCTAAGGTGA+CGG | 0.658046 | 4.4:-17346432 | MS.gene08919:CDS |
| TTACTCTAGCTGAAGATGGG+GGG | 0.666207 | 4.4:+17343313 | None:intergenic |
| ATTGTTCAGGGAGTCACCTG+TGG | 0.666973 | 4.4:-17346121 | MS.gene08919:CDS |
| GAATGAGAAAGCATTGACAA+CGG | 0.668814 | 4.4:-17342463 | MS.gene08919:CDS |
| AAGACGATGATGATGTGGAT+CGG | 0.676350 | 4.4:-17346505 | MS.gene08919:CDS |
| AGATGAGGAGTTAGATTCGG+CGG | 0.685801 | 4.4:+17346781 | None:intergenic |
| GAAGAAACCTAAGGTGACGG+TGG | 0.705385 | 4.4:-17346429 | MS.gene08919:CDS |
| ATCTCAGGAAGAGTTTCACG+AGG | 0.743689 | 4.4:-17342384 | MS.gene08919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGATTATTATTATTTAGT+GGG | - | chr4.4:17343121-17343140 | MS.gene08919:CDS | 15.0% |
| !! | GTGTTAATTAAACATTATTT+GGG | + | chr4.4:17344353-17344372 | None:intergenic | 15.0% |
| !! | TATATAAGTTCACATTATAA+AGG | + | chr4.4:17343568-17343587 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAACATTATT+TGG | + | chr4.4:17344354-17344373 | None:intergenic | 15.0% |
| !! | TTAATGTTGAGATTTAATTA+CGG | - | chr4.4:17342749-17342768 | MS.gene08919:intron | 15.0% |
| !!! | ATATTATTTTACCAACTATT+CGG | + | chr4.4:17344799-17344818 | None:intergenic | 15.0% |
| !!! | GAACTTATATAGTTTTTTTA+AGG | - | chr4.4:17343577-17343596 | MS.gene08919:CDS | 15.0% |
| !!! | TATATAGTTTTTTTAAGGTT+TGG | - | chr4.4:17343582-17343601 | MS.gene08919:CDS | 15.0% |
| !!! | TGAATATGAATATGATTTTA+GGG | + | chr4.4:17345055-17345074 | None:intergenic | 15.0% |
| !!! | TTGAATATGAATATGATTTT+AGG | + | chr4.4:17345056-17345075 | None:intergenic | 15.0% |
| !! | AAGCAAATAACAAAACATAA+TGG | + | chr4.4:17345633-17345652 | None:intergenic | 20.0% |
| !! | AAGTAAAATTCACATAAACA+GGG | + | chr4.4:17344979-17344998 | None:intergenic | 20.0% |
| !! | AATAAGTATATAGAGTTTCA+TGG | + | chr4.4:17346325-17346344 | None:intergenic | 20.0% |
| !! | AATATTAAAAATCTATGTGC+AGG | - | chr4.4:17345427-17345446 | MS.gene08919:intron | 20.0% |
| !! | AGAAATCAAACAATAAAATC+AGG | + | chr4.4:17346023-17346042 | None:intergenic | 20.0% |
| !! | ATAGAGCTAAATAATATGTT+TGG | - | chr4.4:17343337-17343356 | MS.gene08919:CDS | 20.0% |
| !! | ATCAATATCAAGACAAATAA+AGG | - | chr4.4:17344524-17344543 | MS.gene08919:intron | 20.0% |
| !! | ATCATACTTATATCTTAACT+AGG | - | chr4.4:17343266-17343285 | MS.gene08919:intron | 20.0% |
| !! | CCTGATAAAACATAAATATT+CGG | + | chr4.4:17343915-17343934 | None:intergenic | 20.0% |
| !! | GACTTGTAAAAAAAACTTAT+TGG | - | chr4.4:17345005-17345024 | MS.gene08919:CDS | 20.0% |
| !! | TAAGTAAAATTCACATAAAC+AGG | + | chr4.4:17344980-17344999 | None:intergenic | 20.0% |
| !! | TATTTGCTCTTATTCTTTAT+TGG | - | chr4.4:17346341-17346360 | MS.gene08919:intron | 20.0% |
| !! | TCATACTTATATTCTTAACT+AGG | - | chr4.4:17343309-17343328 | MS.gene08919:intron | 20.0% |
| !!! | AACATATTCTTCATTTTGAA+AGG | + | chr4.4:17345098-17345117 | None:intergenic | 20.0% |
| !!! | CACTGATTATTATTATTTAG+TGG | - | chr4.4:17343120-17343139 | MS.gene08919:CDS | 20.0% |
| !!! | GACACATTAATATTTTAACT+TGG | + | chr4.4:17343656-17343675 | None:intergenic | 20.0% |
| !!! | GTTATTATTGGATTTTGTTT+AGG | + | chr4.4:17344201-17344220 | None:intergenic | 20.0% |
| !!! | GTTTTTTTGTTCACTATTAA+GGG | - | chr4.4:17344265-17344284 | MS.gene08919:intron | 20.0% |
| !!! | TATTTTAACTTGGTAGAAAA+AGG | + | chr4.4:17343646-17343665 | None:intergenic | 20.0% |
| !!! | TTTATTTTGATGACAAATCA+TGG | - | chr4.4:17343009-17343028 | MS.gene08919:intron | 20.0% |
| !!! | TTTTTGTAATCTTTTTTACG+AGG | - | chr4.4:17346233-17346252 | MS.gene08919:intron | 20.0% |
| !!! | TTTTTTTTTACCCTTTCAAA+AGG | - | chr4.4:17345365-17345384 | MS.gene08919:intron | 20.0% |
| ! | AAATATTGCAAGATAATCTC+AGG | - | chr4.4:17346679-17346698 | MS.gene08919:CDS | 25.0% |
| ! | AATGAAGATCCAAATAGAAA+AGG | + | chr4.4:17344470-17344489 | None:intergenic | 25.0% |
| ! | ACAAATCTTGTAACAGAAAT+TGG | + | chr4.4:17343178-17343197 | None:intergenic | 25.0% |
| ! | ATGAAGATCCAAATAGAAAA+GGG | + | chr4.4:17344469-17344488 | None:intergenic | 25.0% |
| ! | CAAATCTTGTAACAGAAATT+GGG | + | chr4.4:17343177-17343196 | None:intergenic | 25.0% |
| ! | TATAAAACATTTCAGTACTG+TGG | + | chr4.4:17343727-17343746 | None:intergenic | 25.0% |
| ! | TTCAACTGTTATATATGTTC+TGG | - | chr4.4:17343082-17343101 | MS.gene08919:intron | 25.0% |
| !! | CCGAATATTTATGTTTTATC+AGG | - | chr4.4:17343912-17343931 | MS.gene08919:intron | 25.0% |
| !! | GAAAAGTATGTAAATGTTTC+TGG | - | chr4.4:17345563-17345582 | MS.gene08919:intron | 25.0% |
| !! | GATGTTGTTTATCATAATCT+TGG | - | chr4.4:17343855-17343874 | MS.gene08919:CDS | 25.0% |
| !! | TATATATGTTCTGGTGTTTT+TGG | - | chr4.4:17343091-17343110 | MS.gene08919:CDS | 25.0% |
| !! | TCAATATGTTGCTATTATAC+AGG | - | chr4.4:17345860-17345879 | MS.gene08919:intron | 25.0% |
| !!! | ATGGACTGATTTAACTATTT+TGG | - | chr4.4:17346587-17346606 | MS.gene08919:CDS | 25.0% |
| !!! | GGTTTTTTTGTTCACTATTA+AGG | - | chr4.4:17344264-17344283 | MS.gene08919:intron | 25.0% |
| !!! | TATGTTTGGAGCTTTTAATT+TGG | - | chr4.4:17343351-17343370 | MS.gene08919:CDS | 25.0% |
| !!! | TGCATGTTTGTTTTTGAATT+AGG | - | chr4.4:17342834-17342853 | MS.gene08919:intron | 25.0% |
| !!! | TTGTACTTATCCTTTTGAAA+GGG | + | chr4.4:17345378-17345397 | None:intergenic | 25.0% |
| !!! | TTTAATTACGGTTTTGTGAT+TGG | - | chr4.4:17342761-17342780 | MS.gene08919:intron | 25.0% |
| AAATAGAAAAGGGTGAGAAA+AGG | + | chr4.4:17344459-17344478 | None:intergenic | 30.0% | |
| AAATCCAAAGATTCCATGTT+GGG | + | chr4.4:17346787-17346806 | None:intergenic | 30.0% | |
| AACATAAACCAAACTAGCTA+AGG | - | chr4.4:17344231-17344250 | MS.gene08919:intron | 30.0% | |
| AAGAAAGAACGTGTTAAACT+TGG | - | chr4.4:17343391-17343410 | MS.gene08919:CDS | 30.0% | |
| ACAAAACATAATGGTGAAGA+TGG | + | chr4.4:17345624-17345643 | None:intergenic | 30.0% | |
| ACAAATAAAGGAACTTCTGT+AGG | - | chr4.4:17344536-17344555 | MS.gene08919:intron | 30.0% | |
| ACAAGTAACTTCAAAATCTC+AGG | - | chr4.4:17344101-17344120 | MS.gene08919:intron | 30.0% | |
| ACGAATATTCTGATATTTCC+AGG | + | chr4.4:17344602-17344621 | None:intergenic | 30.0% | |
| AGATGCCATATCAACTAAAT+GGG | - | chr4.4:17345318-17345337 | MS.gene08919:intron | 30.0% | |
| AGGGAGGATAAAAAATATCA+AGG | - | chr4.4:17345246-17345265 | MS.gene08919:intron | 30.0% | |
| ATATCTTAACTAGGAACTCA+GGG | - | chr4.4:17343275-17343294 | MS.gene08919:intron | 30.0% | |
| ATTCTTTATTGGATATGAGC+AGG | - | chr4.4:17346352-17346371 | MS.gene08919:intron | 30.0% | |
| CAAAATACCTTCTAAACACT+TGG | + | chr4.4:17346070-17346089 | None:intergenic | 30.0% | |
| CCAAATCAAATTTAACCTAC+TGG | + | chr4.4:17344931-17344950 | None:intergenic | 30.0% | |
| CCAGTAGGTTAAATTTGATT+TGG | - | chr4.4:17344928-17344947 | MS.gene08919:intron | 30.0% | |
| CTCAATCTACATCTAAATCA+GGG | + | chr4.4:17345129-17345148 | None:intergenic | 30.0% | |
| CTCTTAAAGTTGAAAGAACT+AGG | - | chr4.4:17344860-17344879 | MS.gene08919:intron | 30.0% | |
| GACTTATAAAAACTGCTACA+TGG | + | chr4.4:17343423-17343442 | None:intergenic | 30.0% | |
| TAGATGCCATATCAACTAAA+TGG | - | chr4.4:17345317-17345336 | MS.gene08919:intron | 30.0% | |
| TATATCTTAACTAGGAACTC+AGG | - | chr4.4:17343274-17343293 | MS.gene08919:intron | 30.0% | |
| TCAAATTTAACCTACTGGAA+TGG | + | chr4.4:17344926-17344945 | None:intergenic | 30.0% | |
| TCTCAATCTACATCTAAATC+AGG | + | chr4.4:17345130-17345149 | None:intergenic | 30.0% | |
| TTGGGACAAGATTATTTACT+AGG | + | chr4.4:17344335-17344354 | None:intergenic | 30.0% | |
| ! | CTAGTTCTTTCAACTTTAAG+AGG | + | chr4.4:17344862-17344881 | None:intergenic | 30.0% |
| ! | GACTTTTCTCGTTGATATAT+CGG | - | chr4.4:17342709-17342728 | MS.gene08919:intron | 30.0% |
| ! | GTTGTACTTATCCTTTTGAA+AGG | + | chr4.4:17345379-17345398 | None:intergenic | 30.0% |
| ! | TTAGCTAGTTTGGTTTATGT+TGG | + | chr4.4:17344232-17344251 | None:intergenic | 30.0% |
| ! | TTTTCTCACCCTTTTCTATT+TGG | - | chr4.4:17344458-17344477 | MS.gene08919:intron | 30.0% |
| ! | TTTTTATCCTCCCTCAATTT+GGG | + | chr4.4:17345240-17345259 | None:intergenic | 30.0% |
| !! | AATACAGTAATAAGAGCATC+AGG | + | chr4.4:17345216-17345235 | None:intergenic | 30.0% |
| !! | AATATTTGTTGCTTTAGCGT+TGG | - | chr4.4:17345176-17345195 | MS.gene08919:intron | 30.0% |
| !! | ATATGATTTTAGGGACCAAA+AGG | + | chr4.4:17345046-17345065 | None:intergenic | 30.0% |
| !! | TTGAAGTATTTTTCCCCTTT+TGG | - | chr4.4:17344630-17344649 | MS.gene08919:intron | 30.0% |
| !!! | ATTTTTTTTCCAGACAATCC+TGG | - | chr4.4:17346102-17346121 | MS.gene08919:intron | 30.0% |
| !!! | TTTTTTATCCTCCCTCAATT+TGG | + | chr4.4:17345241-17345260 | None:intergenic | 30.0% |
| AAAAACTCCCAGTGATTGTA+TGG | - | chr4.4:17345274-17345293 | MS.gene08919:intron | 35.0% | |
| AACATTTCAGTACTGTGGTA+TGG | + | chr4.4:17343722-17343741 | None:intergenic | 35.0% | |
| AAGACTTATCTTACTAGGTC+CGG | + | chr4.4:17344681-17344700 | None:intergenic | 35.0% | |
| AATCAAATGACCCTCCAAAA+GGG | + | chr4.4:17344647-17344666 | None:intergenic | 35.0% | |
| AATCCAAAGATTCCATGTTG+GGG | + | chr4.4:17346786-17346805 | None:intergenic | 35.0% | |
| ACAATGGCAAACAAAGAACA+TGG | + | chr4.4:17344755-17344774 | None:intergenic | 35.0% | |
| ACATTTCAGTACTGTGGTAT+GGG | + | chr4.4:17343721-17343740 | None:intergenic | 35.0% | |
| AGATGAACCAAGTGTTTAGA+AGG | - | chr4.4:17346060-17346079 | MS.gene08919:intron | 35.0% | |
| AGTTAAATCAGTCCATGTCA+AGG | + | chr4.4:17346583-17346602 | None:intergenic | 35.0% | |
| ATATCCTGAATCACAAAGAC+AGG | - | chr4.4:17344309-17344328 | MS.gene08919:intron | 35.0% | |
| ATTAAGCATTAGCGAGATGA+AGG | + | chr4.4:17345410-17345429 | None:intergenic | 35.0% | |
| ATTTGATTCATGTTGCCAAC+CGG | - | chr4.4:17344659-17344678 | MS.gene08919:intron | 35.0% | |
| CATAAGAAGAAGGAAGCTAA+CGG | - | chr4.4:17342365-17342384 | MS.gene08919:CDS | 35.0% | |
| CCACAATGGTGTAAAATTTC+TGG | - | chr4.4:17344396-17344415 | MS.gene08919:intron | 35.0% | |
| CCAGCTTCAAATGAAATTGT+TGG | - | chr4.4:17343501-17343520 | MS.gene08919:intron | 35.0% | |
| CCTAAAGAACTTTAGGCAAA+AGG | - | chr4.4:17346487-17346506 | MS.gene08919:CDS | 35.0% | |
| CTGAATAATGAAAGTCAAGC+AGG | + | chr4.4:17344824-17344843 | None:intergenic | 35.0% | |
| GAAATCCAAAGATTCCATGT+TGG | + | chr4.4:17346788-17346807 | None:intergenic | 35.0% | |
| GAAGAAGGTTAAGAAACCAA+AGG | - | chr4.4:17342625-17342644 | MS.gene08919:CDS | 35.0% | |
| GATTCAGGATATGGATTCTT+CGG | + | chr4.4:17344301-17344320 | None:intergenic | 35.0% | |
| GTTAAATCAGTCCATGTCAA+GGG | + | chr4.4:17346582-17346601 | None:intergenic | 35.0% | |
| TACTGTATTGCCCAAATTGA+GGG | - | chr4.4:17345227-17345246 | MS.gene08919:intron | 35.0% | |
| TAGCAAAAGTCATTGATCCT+CGG | - | chr4.4:17343465-17343484 | MS.gene08919:intron | 35.0% | |
| TATACAAGACATCAGTTGAC+TGG | - | chr4.4:17343962-17343981 | MS.gene08919:intron | 35.0% | |
| TATCATAAACCCTCATCGTA+TGG | + | chr4.4:17343242-17343261 | None:intergenic | 35.0% | |
| TATCGGTAGGGTTATTGAAT+TGG | - | chr4.4:17342726-17342745 | MS.gene08919:intron | 35.0% | |
| TGAAAAAGCTTTCTGATGAC+TGG | - | chr4.4:17346417-17346436 | MS.gene08919:CDS | 35.0% | |
| TGCTACTCAAATTTGCAGAA+AGG | + | chr4.4:17343450-17343469 | None:intergenic | 35.0% | |
| TGTCTTTGTGATTCAGGATA+TGG | + | chr4.4:17344310-17344329 | None:intergenic | 35.0% | |
| TGTTGTTATGTGAATTGTGC+TGG | - | chr4.4:17343047-17343066 | MS.gene08919:intron | 35.0% | |
| TGTTTCATTGCTTTACTTCC+AGG | + | chr4.4:17345945-17345964 | None:intergenic | 35.0% | |
| TTAAATCAGTCCATGTCAAG+GGG | + | chr4.4:17346581-17346600 | None:intergenic | 35.0% | |
| TTAAGCATTAGCGAGATGAA+GGG | + | chr4.4:17345409-17345428 | None:intergenic | 35.0% | |
| TTACTGTATTGCCCAAATTG+AGG | - | chr4.4:17345226-17345245 | MS.gene08919:intron | 35.0% | |
| TTCTCGTTGATATATCGGTA+GGG | - | chr4.4:17342714-17342733 | MS.gene08919:intron | 35.0% | |
| TTTCTCGTTGATATATCGGT+AGG | - | chr4.4:17342713-17342732 | MS.gene08919:intron | 35.0% | |
| ! | AAGTATTTTTCCCCTTTTGG+AGG | - | chr4.4:17344633-17344652 | MS.gene08919:intron | 35.0% |
| ! | AGTATTTTTCCCCTTTTGGA+GGG | - | chr4.4:17344634-17344653 | MS.gene08919:intron | 35.0% |
| ! | ATGAGCCCATTTAGTTGATA+TGG | + | chr4.4:17345326-17345345 | None:intergenic | 35.0% |
| ! | ATTTTGTGACCTTTGCCTTT+TGG | - | chr4.4:17345028-17345047 | MS.gene08919:CDS | 35.0% |
| ! | CAATGGTGTAAAATTTCTGG+AGG | - | chr4.4:17344399-17344418 | MS.gene08919:intron | 35.0% |
| ! | CCAACAATTTCATTTGAAGC+TGG | + | chr4.4:17343504-17343523 | None:intergenic | 35.0% |
| ! | CCAGAAATTTTACACCATTG+TGG | + | chr4.4:17344399-17344418 | None:intergenic | 35.0% |
| ! | CCTTTTGCCTAAAGTTCTTT+AGG | + | chr4.4:17346490-17346509 | None:intergenic | 35.0% |
| ! | CTGAATCTGTTTCGATGTTT+TGG | - | chr4.4:17343778-17343797 | MS.gene08919:intron | 35.0% |
| ! | TTTTGCTAACCACTATAGGT+AGG | + | chr4.4:17345502-17345521 | None:intergenic | 35.0% |
| !! | ATTGATTTTACATGACCTGC+AGG | - | chr4.4:17345149-17345168 | MS.gene08919:intron | 35.0% |
| !! | ATTTGATTTGGAGAGTTGCA+TGG | - | chr4.4:17344940-17344959 | MS.gene08919:intron | 35.0% |
| !! | GAATGAGAAAGCATTGACAA+CGG | - | chr4.4:17346615-17346634 | MS.gene08919:CDS | 35.0% |
| !! | GACAGTATTCTTACTGACTT+GGG | - | chr4.4:17344036-17344055 | MS.gene08919:intron | 35.0% |
| !! | TAATAAGAGCATCAGGCTTT+CGG | + | chr4.4:17345209-17345228 | None:intergenic | 35.0% |
| !! | TCTCAGTTGGTTTGTATTCT+TGG | - | chr4.4:17345465-17345484 | MS.gene08919:intron | 35.0% |
| !!! | TATGTTCTGGTGTTTTTGGA+TGG | - | chr4.4:17343095-17343114 | MS.gene08919:CDS | 35.0% |
| AAAACCAAATCCCTGGATTG+CGG | + | chr4.4:17345533-17345552 | None:intergenic | 40.0% | |
| AAAAGCTGAAGAGGTGAAGA+AGG | - | chr4.4:17342610-17342629 | MS.gene08919:CDS | 40.0% | |
| AAAGTCATTGATCCTCGGAA+AGG | - | chr4.4:17343470-17343489 | MS.gene08919:intron | 40.0% | |
| AACAGCTATGGTACGAAAAG+GGG | + | chr4.4:17345600-17345619 | None:intergenic | 40.0% | |
| AAGCAGCTTCTATTGCACTT+TGG | - | chr4.4:17346136-17346155 | MS.gene08919:CDS | 40.0% | |
| AATTTCGCTATCATAGCAGC+AGG | - | chr4.4:17345984-17346003 | MS.gene08919:intron | 40.0% | |
| ACAGGCTACAGAAAGATTTG+AGG | - | chr4.4:17345878-17345897 | MS.gene08919:intron | 40.0% | |
| ACATCAACAATCTTAGCCAC+AGG | + | chr4.4:17342976-17342995 | None:intergenic | 40.0% | |
| ACCAAAGGTGAAGAAACCTA+AGG | - | chr4.4:17342640-17342659 | MS.gene08919:CDS | 40.0% | |
| ACCTTAGGTTTCTTCACCTT+TGG | + | chr4.4:17342644-17342663 | None:intergenic | 40.0% | |
| ACCTTTACTCTAGCTGAAGA+TGG | + | chr4.4:17345772-17345791 | None:intergenic | 40.0% | |
| ACTAGCTAAGGCAGAACAAT+AGG | - | chr4.4:17344243-17344262 | MS.gene08919:intron | 40.0% | |
| ACTTACAAATCCCCTTGACA+TGG | - | chr4.4:17346568-17346587 | MS.gene08919:CDS | 40.0% | |
| ATCAAAGTTTCCAATGCTGG+AGG | + | chr4.4:17345733-17345752 | None:intergenic | 40.0% | |
| ATCAAATGACCCTCCAAAAG+GGG | + | chr4.4:17344646-17344665 | None:intergenic | 40.0% | |
| ATGAGGAGATACAGATGATG+CGG | - | chr4.4:17342872-17342891 | MS.gene08919:intron | 40.0% | |
| CAACAAATATTGCAACCTGC+AGG | + | chr4.4:17345167-17345186 | None:intergenic | 40.0% | |
| CAACAGCTATGGTACGAAAA+GGG | + | chr4.4:17345601-17345620 | None:intergenic | 40.0% | |
| CAACCATCCATACAATCACT+GGG | + | chr4.4:17345284-17345303 | None:intergenic | 40.0% | |
| CAACTATTCGGAACTACCAA+AGG | + | chr4.4:17344787-17344806 | None:intergenic | 40.0% | |
| CACTGAATGCTACAAGCTAT+GGG | - | chr4.4:17346173-17346192 | MS.gene08919:CDS | 40.0% | |
| CACTTAGTTCCTTTCTGCTT+TGG | - | chr4.4:17344007-17344026 | MS.gene08919:intron | 40.0% | |
| CCACCAAGACTTATCTTACT+AGG | + | chr4.4:17344686-17344705 | None:intergenic | 40.0% | |
| CCTAGTAAGATAAGTCTTGG+TGG | - | chr4.4:17344683-17344702 | MS.gene08919:intron | 40.0% | |
| CCTATAGTGGTTAGCAAAAG+TGG | - | chr4.4:17345503-17345522 | MS.gene08919:intron | 40.0% | |
| CCTTTACTCTAGCTGAAGAT+GGG | + | chr4.4:17345771-17345790 | None:intergenic | 40.0% | |
| CTCTCTCAGAATGGGATATA+TGG | + | chr4.4:17345904-17345923 | None:intergenic | 40.0% | |
| CTTTACTCTAGCTGAAGATG+GGG | + | chr4.4:17345770-17345789 | None:intergenic | 40.0% | |
| GAATCAAATGACCCTCCAAA+AGG | + | chr4.4:17344648-17344667 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCATCTCA+CGG | - | chr4.4:17342302-17342321 | MS.gene08919:CDS | 40.0% | |
| GGACCTAGTAAGATAAGTCT+TGG | - | chr4.4:17344680-17344699 | MS.gene08919:intron | 40.0% | |
| GGGAGATCCTAAAGAACTTT+AGG | - | chr4.4:17346480-17346499 | MS.gene08919:CDS | 40.0% | |
| GGTAACAAACTCACCTTCAA+CGG | - | chr4.4:17342401-17342420 | MS.gene08919:CDS | 40.0% | |
| GTCTCAGATATGTGAGAAAG+TGG | + | chr4.4:17343940-17343959 | None:intergenic | 40.0% | |
| GTGAGATGAGGAGTTAGATT+CGG | + | chr4.4:17342303-17342322 | None:intergenic | 40.0% | |
| GTGATCCTAGATGCAATAGA+CGG | + | chr4.4:17346550-17346569 | None:intergenic | 40.0% | |
| TAAGCATTAGCGAGATGAAG+GGG | + | chr4.4:17345408-17345427 | None:intergenic | 40.0% | |
| TCCTTGGGTGAAATTGTTCA+GGG | - | chr4.4:17342945-17342964 | MS.gene08919:CDS | 40.0% | |
| TCGGAGAAGGAAAATTCTTG+AGG | - | chr4.4:17342466-17342485 | MS.gene08919:intron | 40.0% | |
| TCTATCCGTCTATTGCATCT+AGG | - | chr4.4:17346542-17346561 | MS.gene08919:CDS | 40.0% | |
| TCTTCAGCTAGAGTAAAGGT+AGG | - | chr4.4:17345772-17345791 | MS.gene08919:intron | 40.0% | |
| TCTTTGTCATGAAACTGCTG+TGG | - | chr4.4:17344140-17344159 | MS.gene08919:intron | 40.0% | |
| TGGAGTTTCACAATGCAAAG+AGG | + | chr4.4:17343222-17343241 | None:intergenic | 40.0% | |
| TGTGAAACTCCATACGATGA+GGG | - | chr4.4:17343230-17343249 | MS.gene08919:intron | 40.0% | |
| TTAACCTACTGGAATGGAGA+TGG | + | chr4.4:17344920-17344939 | None:intergenic | 40.0% | |
| TTCCTTGGGTGAAATTGTTC+AGG | - | chr4.4:17342944-17342963 | MS.gene08919:CDS | 40.0% | |
| TTGTGAAACTCCATACGATG+AGG | - | chr4.4:17343229-17343248 | MS.gene08919:intron | 40.0% | |
| TTGTTCTGCCTTAGCTAGTT+TGG | + | chr4.4:17344242-17344261 | None:intergenic | 40.0% | |
| TTTACTCTAGCTGAAGATGG+GGG | + | chr4.4:17345769-17345788 | None:intergenic | 40.0% | |
| ! | AAGACGATGATGATGTGGAT+CGG | - | chr4.4:17342573-17342592 | MS.gene08919:intron | 40.0% |
| ! | CATATATCCCATTCTGAGAG+AGG | - | chr4.4:17345902-17345921 | MS.gene08919:intron | 40.0% |
| ! | CTTTGGTAGTTCCGAATAGT+TGG | - | chr4.4:17344785-17344804 | MS.gene08919:intron | 40.0% |
| ! | GCTAGTTTGGTTTATGTTGG+TGG | + | chr4.4:17344229-17344248 | None:intergenic | 40.0% |
| ! | GGACAGTATTCTTACTGACT+TGG | - | chr4.4:17344035-17344054 | MS.gene08919:intron | 40.0% |
| ! | GTGGTTGTTGTTAGTTGTGA+CGG | - | chr4.4:17344702-17344721 | MS.gene08919:intron | 40.0% |
| ! | TCAAAAATGACTTGCACCCA+TGG | + | chr4.4:17346720-17346739 | None:intergenic | 40.0% |
| ! | TCATGAGTGCTTTTATGACC+TGG | - | chr4.4:17344581-17344600 | MS.gene08919:intron | 40.0% |
| ! | TGACGGCATTTTGTGACTTT+GGG | - | chr4.4:17344719-17344738 | MS.gene08919:intron | 40.0% |
| ! | TGGTGTAAAATTTCTGGAGG+AGG | - | chr4.4:17344402-17344421 | MS.gene08919:intron | 40.0% |
| ! | TTCCTTTCTGCTTTGGTCTT+TGG | - | chr4.4:17344014-17344033 | MS.gene08919:intron | 40.0% |
| !! | ATGCGGTTTGCGGATTATTT+TGG | - | chr4.4:17342889-17342908 | MS.gene08919:intron | 40.0% |
| !! | CCACTTTTGCTAACCACTAT+AGG | + | chr4.4:17345506-17345525 | None:intergenic | 40.0% |
| !! | GTTAACGGTGCTGTAAGAAA+AGG | - | chr4.4:17345691-17345710 | MS.gene08919:intron | 40.0% |
| !! | GTTGAAGGTGAGTTTGTTAC+CGG | + | chr4.4:17342402-17342421 | None:intergenic | 40.0% |
| !! | TACTTGTTGCACAGCCTTTT+TGG | + | chr4.4:17344088-17344107 | None:intergenic | 40.0% |
| !! | TTGGTGGCTGGTGTTATTAT+TGG | + | chr4.4:17344213-17344232 | None:intergenic | 40.0% |
| !! | TTGGTTTGTATTCTTGGTCG+CGG | - | chr4.4:17345471-17345490 | MS.gene08919:intron | 40.0% |
| !! | TTTTAGGGACCAAAAGGCAA+AGG | + | chr4.4:17345040-17345059 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTCTACCCCAACA+TGG | - | chr4.4:17346771-17346790 | MS.gene08919:CDS | 40.0% |
| AAACCAAATCCCTGGATTGC+GGG | + | chr4.4:17345532-17345551 | None:intergenic | 45.0% | |
| AAAGTTTCCAATGCTGGAGG+AGG | + | chr4.4:17345730-17345749 | None:intergenic | 45.0% | |
| AAGATGGGGGGAAAGTAACA+CGG | + | chr4.4:17345756-17345775 | None:intergenic | 45.0% | |
| AAGCTGCAAAACCAAATCCC+TGG | + | chr4.4:17345540-17345559 | None:intergenic | 45.0% | |
| ACTCCCAGTGATTGTATGGA+TGG | - | chr4.4:17345278-17345297 | MS.gene08919:intron | 45.0% | |
| AGAAAGGAACTAAGTGCCTC+GGG | + | chr4.4:17344003-17344022 | None:intergenic | 45.0% | |
| AGATGAGGAGTTAGATTCGG+CGG | + | chr4.4:17342300-17342319 | None:intergenic | 45.0% | |
| AGTAAAGGTAGGTGTTCAGC+TGG | - | chr4.4:17345783-17345802 | MS.gene08919:intron | 45.0% | |
| ATCTATGTGCAGGCTTCAGT+AGG | - | chr4.4:17345437-17345456 | MS.gene08919:intron | 45.0% | |
| ATCTCAGGAAGAGTTTCACG+AGG | - | chr4.4:17346694-17346713 | MS.gene08919:CDS | 45.0% | |
| ATGGATTCTTCGGATTCCAC+TGG | + | chr4.4:17344291-17344310 | None:intergenic | 45.0% | |
| CAGAAAGGAACTAAGTGCCT+CGG | + | chr4.4:17344004-17344023 | None:intergenic | 45.0% | |
| CAGTTGACTGGATCAATCGT+CGG | - | chr4.4:17343974-17343993 | MS.gene08919:intron | 45.0% | |
| CCAAAGGTGGACAAAGACAA+TGG | + | chr4.4:17344771-17344790 | None:intergenic | 45.0% | |
| CCATTGTCTTTGTCCACCTT+TGG | - | chr4.4:17344768-17344787 | MS.gene08919:intron | 45.0% | |
| CCCATCTTCAGCTAGAGTAA+AGG | - | chr4.4:17345768-17345787 | MS.gene08919:intron | 45.0% | |
| CGGATCAAAGTTTCCAATGC+TGG | + | chr4.4:17345736-17345755 | None:intergenic | 45.0% | |
| CTACCCCAACATGGAATCTT+TGG | - | chr4.4:17346780-17346799 | MS.gene08919:CDS | 45.0% | |
| CTATTCGGAACTACCAAAGG+TGG | + | chr4.4:17344784-17344803 | None:intergenic | 45.0% | |
| CTTATCTTACTAGGTCCGGT+TGG | + | chr4.4:17344677-17344696 | None:intergenic | 45.0% | |
| CTTCTTATGCTTCTTCGCGT+AGG | + | chr4.4:17342354-17342373 | None:intergenic | 45.0% | |
| GAAGATTGATGCAGCTGATC+TGG | - | chr4.4:17342685-17342704 | MS.gene08919:CDS | 45.0% | |
| GAAGGAAAATTCTTGAGGCG+AGG | - | chr4.4:17342471-17342490 | MS.gene08919:intron | 45.0% | |
| GAATATATCGCGCAGACAGA+TGG | + | chr4.4:17346524-17346543 | None:intergenic | 45.0% | |
| GATACAGATGATGCGGTTTG+CGG | - | chr4.4:17342879-17342898 | MS.gene08919:intron | 45.0% | |
| GATTGTATGGATGGTTGCTC+AGG | - | chr4.4:17345287-17345306 | MS.gene08919:intron | 45.0% | |
| GCAACAGCTATGGTACGAAA+AGG | + | chr4.4:17345602-17345621 | None:intergenic | 45.0% | |
| GCAACCATCCATACAATCAC+TGG | + | chr4.4:17345285-17345304 | None:intergenic | 45.0% | |
| GCACTGAATGCTACAAGCTA+TGG | - | chr4.4:17346172-17346191 | MS.gene08919:CDS | 45.0% | |
| GCTTGTAGCATTCAGTGCTT+TGG | + | chr4.4:17346170-17346189 | None:intergenic | 45.0% | |
| GGAGAATGGAAAAGCTGAAG+AGG | - | chr4.4:17342601-17342620 | MS.gene08919:CDS | 45.0% | |
| GGTGAAGAAACCTAAGGTGA+CGG | - | chr4.4:17342646-17342665 | MS.gene08919:CDS | 45.0% | |
| GTCCAAAGACCAAAGCAGAA+AGG | + | chr4.4:17344019-17344038 | None:intergenic | 45.0% | |
| GTTTCCATCTCCATTCCAGT+AGG | - | chr4.4:17344913-17344932 | MS.gene08919:intron | 45.0% | |
| TAGGCCTGTCTTTGTGATTC+AGG | + | chr4.4:17344316-17344335 | None:intergenic | 45.0% | |
| TCAGTAGGAGATCTCTCAGT+TGG | - | chr4.4:17345452-17345471 | MS.gene08919:intron | 45.0% | |
| TCCCTGAACAATTTCACCCA+AGG | + | chr4.4:17342949-17342968 | None:intergenic | 45.0% | |
| TGAGCAGGAGAAAGTTTACC+AGG | - | chr4.4:17346367-17346386 | MS.gene08919:intron | 45.0% | |
| TGTATTGCCCAAATTGAGGG+AGG | - | chr4.4:17345230-17345249 | MS.gene08919:intron | 45.0% | |
| TGTGACCAAGGGTTCCAAAA+AGG | - | chr4.4:17344071-17344090 | MS.gene08919:intron | 45.0% | |
| TGTTCACTATTAAGGGCCAG+TGG | - | chr4.4:17344272-17344291 | MS.gene08919:intron | 45.0% | |
| TTACTCTAGCTGAAGATGGG+GGG | + | chr4.4:17345768-17345787 | None:intergenic | 45.0% | |
| TTCGATACTCCAGGATTGTC+TGG | + | chr4.4:17346114-17346133 | None:intergenic | 45.0% | |
| ! | ACGGCATTTTGTGACTTTGG+GGG | - | chr4.4:17344721-17344740 | MS.gene08919:intron | 45.0% |
| ! | ATATCCCATTCTGAGAGAGG+TGG | - | chr4.4:17345905-17345924 | MS.gene08919:intron | 45.0% |
| ! | ATGATGATGTGGATCGGTCA+GGG | - | chr4.4:17342579-17342598 | MS.gene08919:intron | 45.0% |
| ! | ATTGATTCCTCCTCCAGCAT+TGG | - | chr4.4:17345720-17345739 | MS.gene08919:intron | 45.0% |
| ! | CAAGTCGCTTGAGTTGCATT+CGG | - | chr4.4:17342439-17342458 | MS.gene08919:CDS | 45.0% |
| ! | CGATGAAGACGATGATGATG+TGG | - | chr4.4:17342568-17342587 | MS.gene08919:intron | 45.0% |
| ! | CGCGAAGAAGCATAAGAAGA+AGG | - | chr4.4:17342355-17342374 | MS.gene08919:CDS | 45.0% |
| ! | GAACTTCTGTAGGTGCTATC+GGG | - | chr4.4:17344546-17344565 | MS.gene08919:intron | 45.0% |
| ! | GACGGCATTTTGTGACTTTG+GGG | - | chr4.4:17344720-17344739 | MS.gene08919:intron | 45.0% |
| ! | GGAACTTCTGTAGGTGCTAT+CGG | - | chr4.4:17344545-17344564 | MS.gene08919:intron | 45.0% |
| ! | GTGACGGCATTTTGTGACTT+TGG | - | chr4.4:17344718-17344737 | MS.gene08919:intron | 45.0% |
| ! | TTGAGTTGCATTCGGAGGAT+CGG | - | chr4.4:17342447-17342466 | MS.gene08919:CDS | 45.0% |
| ! | TTTTGTCCACCCCTAAAGCA+CGG | - | chr4.4:17345659-17345678 | MS.gene08919:intron | 45.0% |
| !! | GGCTCTGGTGTTTTTGCATT+TGG | - | chr4.4:17345804-17345823 | MS.gene08919:intron | 45.0% |
| !! | GTTTGGTTTATGTTGGTGGC+TGG | + | chr4.4:17344225-17344244 | None:intergenic | 45.0% |
| !! | TTCTTTAGGATCTCCCTGAG+TGG | + | chr4.4:17346476-17346495 | None:intergenic | 45.0% |
| !!! | GGATTTGGTTTTGCAGCTTG+TGG | - | chr4.4:17345541-17345560 | MS.gene08919:intron | 45.0% |
| AACCCTTGGTCACAGTTTGC+TGG | + | chr4.4:17344065-17344084 | None:intergenic | 50.0% | |
| AAGAGCCACCTCTCTCAGAA+TGG | + | chr4.4:17345913-17345932 | None:intergenic | 50.0% | |
| AATTCTTGAGGCGAGGACTG+CGG | - | chr4.4:17342478-17342497 | MS.gene08919:intron | 50.0% | |
| ACCAAAACAGCCCGTGCTTT+AGG | + | chr4.4:17345673-17345692 | None:intergenic | 50.0% | |
| ACCATTGTGGCACGTGTGAA+GGG | + | chr4.4:17344386-17344405 | None:intergenic | 50.0% | |
| AGAGCCACCTCTCTCAGAAT+GGG | + | chr4.4:17345912-17345931 | None:intergenic | 50.0% | |
| AGCCAGCAAACTGTGACCAA+GGG | - | chr4.4:17344060-17344079 | MS.gene08919:intron | 50.0% | |
| AGCTATGGTACGAAAAGGGG+TGG | + | chr4.4:17345597-17345616 | None:intergenic | 50.0% | |
| ATCTCCCTGAGTGGCTCATA+AGG | + | chr4.4:17346467-17346486 | None:intergenic | 50.0% | |
| ATTGTTCAGGGAGTCACCTG+TGG | - | chr4.4:17342957-17342976 | MS.gene08919:CDS | 50.0% | |
| CAAAACAGCCCGTGCTTTAG+GGG | + | chr4.4:17345671-17345690 | None:intergenic | 50.0% | |
| CCAAAACAGCCCGTGCTTTA+GGG | + | chr4.4:17345672-17345691 | None:intergenic | 50.0% | |
| GAAGAGTTTCACGAGGCCAT+GGG | - | chr4.4:17346701-17346720 | MS.gene08919:CDS | 50.0% | |
| GATCGCTGCTTCGATCTAAC+TGG | + | chr4.4:17342527-17342546 | None:intergenic | 50.0% | |
| GATGAAAACTACACCCCCTC+CGG | - | chr4.4:17342260-17342279 | MS.gene08919:CDS | 50.0% | |
| GCGGAATCTCCTACCTATAG+TGG | - | chr4.4:17345490-17345509 | MS.gene08919:intron | 50.0% | |
| GCGGAGGCTGAATTTGATGA+TGG | - | chr4.4:17342500-17342519 | MS.gene08919:intron | 50.0% | |
| GCTATCATAGCAGCAGGAGA+AGG | - | chr4.4:17345990-17346009 | MS.gene08919:intron | 50.0% | |
| GCTGCTTCTTTCGATACTCC+AGG | + | chr4.4:17346123-17346142 | None:intergenic | 50.0% | |
| GGCATCGTTTGAGCAGAATG+AGG | - | chr4.4:17342855-17342874 | MS.gene08919:intron | 50.0% | |
| GGTGAAGATGGCAACAGCTA+TGG | + | chr4.4:17345612-17345631 | None:intergenic | 50.0% | |
| GTCTCCTTATGAGCCACTCA+GGG | - | chr4.4:17346460-17346479 | MS.gene08919:CDS | 50.0% | |
| TAGCCAGCAAACTGTGACCA+AGG | - | chr4.4:17344059-17344078 | MS.gene08919:intron | 50.0% | |
| TATGGATGGTTGCTCAGGTG+AGG | - | chr4.4:17345292-17345311 | MS.gene08919:intron | 50.0% | |
| TCATAGCAGCAGGAGAAGGT+TGG | - | chr4.4:17345994-17346013 | MS.gene08919:intron | 50.0% | |
| TGGTACGAAAAGGGGTGGAA+AGG | + | chr4.4:17345592-17345611 | None:intergenic | 50.0% | |
| TGTCTCCTTATGAGCCACTC+AGG | - | chr4.4:17346459-17346478 | MS.gene08919:CDS | 50.0% | |
| TTTGTCCACCCCTAAAGCAC+GGG | - | chr4.4:17345660-17345679 | MS.gene08919:intron | 50.0% | |
| ! | ATTCTGAGAGAGGTGGCTCT+TGG | - | chr4.4:17345912-17345931 | MS.gene08919:intron | 50.0% |
| ! | CGCTTGCTACAATGTTCTCC+TGG | + | chr4.4:17346388-17346407 | None:intergenic | 50.0% |
| ! | GAAGAAACCTAAGGTGACGG+TGG | - | chr4.4:17342649-17342668 | MS.gene08919:CDS | 50.0% |
| ! | GATGATGATGTGGATCGGTC+AGG | - | chr4.4:17342578-17342597 | MS.gene08919:intron | 50.0% |
| ! | TGATGATGTGGATCGGTCAG+GGG | - | chr4.4:17342580-17342599 | MS.gene08919:intron | 50.0% |
| !! | GGTGAGTTTGTTACCGGTAC+CGG | + | chr4.4:17342396-17342415 | None:intergenic | 50.0% |
| !!! | CACAGCCTTTTTGGAACCCT+TGG | + | chr4.4:17344079-17344098 | None:intergenic | 50.0% |
| !!! | GCACGGGCTGTTTTGGTTAA+CGG | - | chr4.4:17345676-17345695 | MS.gene08919:intron | 50.0% |
| AAAGTGGCAACCCGCAATCC+AGG | - | chr4.4:17345519-17345538 | MS.gene08919:intron | 55.0% | |
| AAGTGGCAACCCGCAATCCA+GGG | - | chr4.4:17345520-17345539 | MS.gene08919:intron | 55.0% | |
| ACCAACAGCCACAGCAAGCA+CGG | + | chr4.4:17346749-17346768 | None:intergenic | 55.0% | |
| ACCCTTCACACGTGCCACAA+TGG | - | chr4.4:17344382-17344401 | MS.gene08919:intron | 55.0% | |
| AGCAGCGTCGTTTCCGTTGA+AGG | + | chr4.4:17342417-17342436 | None:intergenic | 55.0% | |
| AGCCACAGCAAGCACGGTAA+AGG | + | chr4.4:17346743-17346762 | None:intergenic | 55.0% | |
| AGGAGTTAGATTCGGCGGTG+TGG | + | chr4.4:17342295-17342314 | None:intergenic | 55.0% | |
| CAACCCGCAATCCAGGGATT+TGG | - | chr4.4:17345526-17345545 | MS.gene08919:intron | 55.0% | |
| CACCATTGTGGCACGTGTGA+AGG | + | chr4.4:17344387-17344406 | None:intergenic | 55.0% | |
| CAGCGCTGCTCAGTTTCCTT+GGG | - | chr4.4:17342930-17342949 | MS.gene08919:CDS | 55.0% | |
| GGAAGAGTTTCACGAGGCCA+TGG | - | chr4.4:17346700-17346719 | MS.gene08919:CDS | 55.0% | |
| GGAGTTAGATTCGGCGGTGT+GGG | + | chr4.4:17342294-17342313 | None:intergenic | 55.0% | |
| TCAGCGCTGCTCAGTTTCCT+TGG | - | chr4.4:17342929-17342948 | MS.gene08919:CDS | 55.0% | |
| TGCATTCGGAGGATCGGAGA+AGG | - | chr4.4:17342453-17342472 | MS.gene08919:CDS | 55.0% | |
| ! | CTGGCACGTTTTCCTTTCCG+AGG | + | chr4.4:17343485-17343504 | None:intergenic | 55.0% |
| ! | GAAACCTAAGGTGACGGTGG+CGG | - | chr4.4:17342652-17342671 | MS.gene08919:CDS | 55.0% |
| ! | GACCTTTACCGTGCTTGCTG+TGG | - | chr4.4:17346738-17346757 | MS.gene08919:CDS | 55.0% |
| ! | GTCGCTTGAGTTGCATTCGG+AGG | - | chr4.4:17342442-17342461 | MS.gene08919:CDS | 55.0% |
| !! | CCCTAAAGCACGGGCTGTTT+TGG | - | chr4.4:17345669-17345688 | MS.gene08919:intron | 55.0% |
| AAGGAAGCTAACGGCGTCGC+CGG | - | chr4.4:17342374-17342393 | MS.gene08919:CDS | 60.0% | |
| AGATTCGGCGGTGTGGGAGA+TGG | + | chr4.4:17342288-17342307 | None:intergenic | 60.0% | |
| CTGAGAGAGGTGGCTCTTGG+CGG | - | chr4.4:17345915-17345934 | MS.gene08919:intron | 60.0% | |
| GACCTTCTGCCAGCCGTGAT+CGG | + | chr4.4:17342330-17342349 | None:intergenic | 60.0% | |
| GATCAATCGTCGGTCTCCCG+AGG | - | chr4.4:17343984-17344003 | MS.gene08919:intron | 60.0% | |
| GTGGATCGGTCAGGGGAGAA+TGG | - | chr4.4:17342587-17342606 | MS.gene08919:intron | 60.0% | |
| GTGTGGGAGATGGATCCGGA+GGG | + | chr4.4:17342278-17342297 | None:intergenic | 60.0% | |
| TGTGGGAGATGGATCCGGAG+GGG | + | chr4.4:17342277-17342296 | None:intergenic | 60.0% | |
| ! | GGTAGGTGTTCAGCTGGCTC+TGG | - | chr4.4:17345789-17345808 | MS.gene08919:intron | 60.0% |
| !! | AACAGCCCGTGCTTTAGGGG+TGG | + | chr4.4:17345668-17345687 | None:intergenic | 60.0% |
| !! | ACCGTGCTTGCTGTGGCTGT+TGG | - | chr4.4:17346745-17346764 | MS.gene08919:CDS | 60.0% |
| !! | TCATCTCACGGCGCCGATCA+CGG | - | chr4.4:17342314-17342333 | MS.gene08919:CDS | 60.0% |
| GCTTCCGCCACCGTCACCTT+AGG | + | chr4.4:17342659-17342678 | None:intergenic | 65.0% | |
| GGCGGTGTGGGAGATGGATC+CGG | + | chr4.4:17342282-17342301 | None:intergenic | 65.0% | |
| GGTGTGGGAGATGGATCCGG+AGG | + | chr4.4:17342279-17342298 | None:intergenic | 65.0% | |
| GTGATCGGCGCCGTGAGATG+AGG | + | chr4.4:17342315-17342334 | None:intergenic | 65.0% | |
| GTGGCTCTTGGCGGTTCTCC+TGG | - | chr4.4:17345924-17345943 | MS.gene08919:intron | 65.0% | |
| GTGGGAGATGGATCCGGAGG+GGG | + | chr4.4:17342276-17342295 | None:intergenic | 65.0% | |
| TCTTGAGGCGAGGACTGCGG+CGG | - | chr4.4:17342481-17342500 | MS.gene08919:intron | 65.0% | |
| CGCCGATCACGGCTGGCAGA+AGG | - | chr4.4:17342325-17342344 | MS.gene08919:CDS | 70.0% | |
| GCTAACGGCGTCGCCGGTAC+CGG | - | chr4.4:17342380-17342399 | MS.gene08919:CDS | 70.0% | |
| TGAGGCGAGGACTGCGGCGG+AGG | - | chr4.4:17342484-17342503 | MS.gene08919:intron | 75.0% | |
| !! | CTCACGGCGCCGATCACGGC+TGG | - | chr4.4:17342318-17342337 | MS.gene08919:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 17342257 | 17346843 | 17342257 | ID=MS.gene08919 |
| chr4.4 | mRNA | 17342257 | 17346843 | 17342257 | ID=MS.gene08919.t1;Parent=MS.gene08919 |
| chr4.4 | exon | 17346370 | 17346843 | 17346370 | ID=MS.gene08919.t1.exon1;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17346370 | 17346843 | 17346370 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17346107 | 17346244 | 17346107 | ID=MS.gene08919.t1.exon2;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17346107 | 17346244 | 17346107 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17344978 | 17345166 | 17344978 | ID=MS.gene08919.t1.exon3;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17344978 | 17345166 | 17344978 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17343792 | 17343929 | 17343792 | ID=MS.gene08919.t1.exon4;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17343792 | 17343929 | 17343792 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17343533 | 17343651 | 17343533 | ID=MS.gene08919.t1.exon5;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17343533 | 17343651 | 17343533 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17343311 | 17343443 | 17343311 | ID=MS.gene08919.t1.exon6;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17343311 | 17343443 | 17343311 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17343089 | 17343218 | 17343089 | ID=MS.gene08919.t1.exon7;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17343089 | 17343218 | 17343089 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17342906 | 17342985 | 17342906 | ID=MS.gene08919.t1.exon8;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17342906 | 17342985 | 17342906 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17342592 | 17342726 | 17342592 | ID=MS.gene08919.t1.exon9;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17342592 | 17342726 | 17342592 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| chr4.4 | exon | 17342257 | 17342484 | 17342257 | ID=MS.gene08919.t1.exon10;Parent=MS.gene08919.t1 |
| chr4.4 | CDS | 17342257 | 17342484 | 17342257 | ID=cds.MS.gene08919.t1;Parent=MS.gene08919.t1 |
| Gene Sequence |
| Protein sequence |
