Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25868.t1 | XP_013461082.1 | 74.8 | 484 | 4 | 2 | 1 | 366 | 1 | 484 | 7.00E-197 | 696.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25868.t1 | F8WLS6 | 40.1 | 476 | 166 | 4 | 3 | 359 | 4 | 479 | 5.0e-95 | 349.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25868.t1 | A0A072V079 | 74.8 | 484 | 4 | 2 | 1 | 366 | 1 | 484 | 5.0e-197 | 696.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene25868 | 0.846673 | 1.87E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene25868 | 0.812561 | 3.98E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene25868 | 0.857322 | 1.77E-62 | -1.69E-46 |
| MS.gene049260 | MS.gene25868 | 0.832486 | 9.20E-56 | -1.69E-46 |
| MS.gene049297 | MS.gene25868 | 0.806573 | 7.70E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene25868 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene049993 | MS.gene25868 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene050139 | MS.gene25868 | 0.809224 | 2.10E-50 | -1.69E-46 |
| MS.gene050168 | MS.gene25868 | 0.863919 | 1.77E-64 | -1.69E-46 |
| MS.gene050226 | MS.gene25868 | 0.833619 | 4.81E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene25868 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene25868 | 0.825462 | 4.63E-54 | -1.69E-46 |
| MS.gene050330 | MS.gene25868 | -0.8032 | 3.90E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene25868 | 0.806965 | 6.36E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene25868 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene25868 | 0.828222 | 1.01E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene25868 | 0.836661 | 8.21E-57 | -1.69E-46 |
| MS.gene050820 | MS.gene25868 | 0.815882 | 7.36E-52 | -1.69E-46 |
| MS.gene050987 | MS.gene25868 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene25868 | 0.830401 | 3.00E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene25868 | 0.814222 | 1.72E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene25868 | -0.818754 | 1.66E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene25868 | 0.830516 | 2.81E-55 | -1.69E-46 |
| MS.gene052255 | MS.gene25868 | 0.825808 | 3.83E-54 | -1.69E-46 |
| MS.gene052389 | MS.gene25868 | 0.804258 | 2.35E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene25868 | 0.84416 | 8.98E-59 | -1.69E-46 |
| MS.gene053166 | MS.gene25868 | 0.805039 | 1.62E-49 | -1.69E-46 |
| MS.gene053184 | MS.gene25868 | 0.823447 | 1.38E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene25868 | 0.814154 | 1.78E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene25868 | 0.838324 | 3.08E-57 | -1.69E-46 |
| MS.gene053555 | MS.gene25868 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene053584 | MS.gene25868 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene25868 | 0.831149 | 1.97E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene25868 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene25868 | 0.810752 | 9.86E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene25868 | 0.813542 | 2.43E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene25868 | 0.807828 | 4.18E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene25868 | 0.85335 | 2.53E-61 | -1.69E-46 |
| MS.gene054184 | MS.gene25868 | 0.844302 | 8.23E-59 | -1.69E-46 |
| MS.gene054185 | MS.gene25868 | 0.843046 | 1.78E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene25868 | 0.807942 | 3.95E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene25868 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene054433 | MS.gene25868 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene25868 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene25868 | 0.80843 | 3.11E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene25868 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene25868 | 0.829761 | 4.30E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene25868 | 0.801351 | 9.38E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene25868 | 0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene25868 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene25868 | 0.855846 | 4.80E-62 | -1.69E-46 |
| MS.gene055357 | MS.gene25868 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene25868 | 0.88427 | 2.21E-71 | -1.69E-46 |
| MS.gene055604 | MS.gene25868 | 0.839236 | 1.79E-57 | -1.69E-46 |
| MS.gene055701 | MS.gene25868 | 0.838275 | 3.17E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene25868 | 0.812545 | 4.02E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene25868 | 0.807563 | 4.75E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene25868 | 0.823523 | 1.32E-53 | -1.69E-46 |
| MS.gene057394 | MS.gene25868 | 0.821294 | 4.36E-53 | -1.69E-46 |
| MS.gene057395 | MS.gene25868 | 0.833443 | 5.32E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene25868 | 0.835939 | 1.25E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene25868 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene25868 | 0.82913 | 6.12E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene25868 | 0.810499 | 1.12E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene25868 | 0.82065 | 6.13E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene25868 | 0.807962 | 3.91E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene25868 | 0.817032 | 4.07E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene25868 | 0.814981 | 1.17E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene25868 | 0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene058833 | MS.gene25868 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene059006 | MS.gene25868 | 0.82672 | 2.32E-54 | -1.69E-46 |
| MS.gene059124 | MS.gene25868 | 0.840636 | 7.72E-58 | -1.69E-46 |
| MS.gene059128 | MS.gene25868 | 0.845388 | 4.19E-59 | -1.69E-46 |
| MS.gene059161 | MS.gene25868 | 0.816959 | 4.23E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene25868 | 0.812152 | 4.90E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene25868 | 0.813394 | 2.62E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene25868 | 0.850534 | 1.60E-60 | -1.69E-46 |
| MS.gene059609 | MS.gene25868 | 0.831685 | 1.45E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene25868 | 0.803834 | 2.89E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene25868 | 0.826528 | 2.58E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene25868 | 0.82263 | 2.14E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene25868 | 0.805082 | 1.59E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene25868 | 0.823265 | 1.52E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene25868 | -0.827149 | 1.83E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25868.t1 | MTR_3g479470 | 89.231 | 325 | 6 | 1 | 1 | 296 | 1 | 325 | 0.0 | 591 |
| MS.gene25868.t1 | MTR_3g479470 | 97.297 | 74 | 2 | 0 | 293 | 366 | 411 | 484 | 9.50e-42 | 152 |
| MS.gene25868.t1 | MTR_3g079480 | 54.571 | 350 | 129 | 2 | 8 | 327 | 16 | 365 | 1.44e-126 | 373 |
| MS.gene25868.t1 | MTR_3g079480 | 55.405 | 74 | 33 | 0 | 293 | 366 | 420 | 493 | 3.90e-19 | 89.0 |
| MS.gene25868.t1 | MTR_3g479520 | 54.572 | 339 | 125 | 1 | 10 | 319 | 12 | 350 | 2.87e-125 | 369 |
| MS.gene25868.t1 | MTR_3g479520 | 46.602 | 103 | 48 | 3 | 268 | 366 | 388 | 487 | 2.02e-20 | 92.8 |
| MS.gene25868.t1 | MTR_3g479490 | 50.575 | 348 | 142 | 2 | 10 | 327 | 3 | 350 | 1.18e-119 | 355 |
| MS.gene25868.t1 | MTR_3g479490 | 54.054 | 74 | 34 | 0 | 293 | 366 | 405 | 478 | 3.71e-19 | 89.0 |
| MS.gene25868.t1 | MTR_5g464760 | 44.729 | 351 | 162 | 6 | 10 | 329 | 9 | 358 | 7.79e-100 | 304 |
| MS.gene25868.t1 | MTR_5g464810 | 44.348 | 345 | 164 | 2 | 13 | 329 | 12 | 356 | 1.01e-98 | 301 |
| MS.gene25868.t1 | MTR_5g064240 | 44.348 | 345 | 164 | 2 | 13 | 329 | 12 | 356 | 1.01e-98 | 301 |
| MS.gene25868.t1 | MTR_0036s0220 | 42.486 | 346 | 171 | 2 | 12 | 329 | 11 | 356 | 2.19e-94 | 290 |
| MS.gene25868.t1 | MTR_6g014186 | 36.092 | 435 | 193 | 6 | 10 | 360 | 4 | 437 | 5.46e-91 | 280 |
| MS.gene25868.t1 | MTR_6g014040 | 41.486 | 323 | 156 | 3 | 7 | 296 | 4 | 326 | 1.51e-85 | 267 |
| MS.gene25868.t1 | MTR_6g014040 | 47.826 | 69 | 36 | 0 | 293 | 361 | 412 | 480 | 5.69e-12 | 67.4 |
| MS.gene25868.t1 | MTR_2g008210 | 40.470 | 383 | 180 | 9 | 3 | 348 | 1 | 372 | 4.64e-84 | 263 |
| MS.gene25868.t1 | MTR_3g008010 | 40.566 | 318 | 159 | 2 | 9 | 296 | 6 | 323 | 3.51e-83 | 261 |
| MS.gene25868.t1 | MTR_3g008010 | 48.529 | 68 | 35 | 0 | 293 | 360 | 409 | 476 | 2.10e-14 | 74.7 |
| MS.gene25868.t1 | MTR_6g014290 | 40.446 | 314 | 157 | 2 | 9 | 292 | 6 | 319 | 4.14e-82 | 258 |
| MS.gene25868.t1 | MTR_6g014290 | 47.826 | 69 | 36 | 0 | 293 | 361 | 409 | 477 | 1.96e-14 | 74.7 |
| MS.gene25868.t1 | MTR_6g014020 | 40.625 | 320 | 156 | 5 | 10 | 296 | 7 | 325 | 4.43e-81 | 256 |
| MS.gene25868.t1 | MTR_3g479620 | 71.166 | 163 | 47 | 0 | 10 | 172 | 3 | 165 | 1.76e-80 | 244 |
| MS.gene25868.t1 | MTR_6g014250 | 38.854 | 314 | 162 | 2 | 9 | 292 | 6 | 319 | 6.54e-80 | 253 |
| MS.gene25868.t1 | MTR_6g014250 | 44.928 | 69 | 38 | 0 | 293 | 361 | 409 | 477 | 6.11e-13 | 70.1 |
| MS.gene25868.t1 | MTR_4g094220 | 38.941 | 321 | 163 | 2 | 11 | 298 | 5 | 325 | 1.83e-79 | 251 |
| MS.gene25868.t1 | MTR_4g094220 | 49.351 | 77 | 36 | 1 | 282 | 358 | 402 | 475 | 2.05e-15 | 77.8 |
| MS.gene25868.t1 | MTR_0288s0020 | 43.771 | 297 | 154 | 3 | 9 | 292 | 6 | 302 | 3.49e-79 | 250 |
| MS.gene25868.t1 | MTR_0288s0020 | 50.725 | 69 | 34 | 0 | 293 | 361 | 392 | 460 | 3.04e-14 | 73.9 |
| MS.gene25868.t1 | MTR_6g014220 | 40.635 | 315 | 155 | 4 | 9 | 292 | 6 | 319 | 2.93e-77 | 246 |
| MS.gene25868.t1 | MTR_6g014220 | 51.471 | 68 | 33 | 0 | 294 | 361 | 410 | 477 | 1.67e-14 | 75.1 |
| MS.gene25868.t1 | MTR_6g013440 | 39.628 | 323 | 161 | 5 | 3 | 292 | 1 | 322 | 1.61e-73 | 236 |
| MS.gene25868.t1 | MTR_6g013440 | 41.791 | 67 | 39 | 0 | 293 | 359 | 412 | 478 | 9.36e-11 | 63.5 |
| MS.gene25868.t1 | MTR_6g013450 | 40.635 | 315 | 154 | 4 | 11 | 292 | 8 | 322 | 3.79e-73 | 235 |
| MS.gene25868.t1 | MTR_6g013960 | 39.185 | 319 | 162 | 5 | 10 | 296 | 7 | 325 | 6.58e-73 | 234 |
| MS.gene25868.t1 | MTR_6g013960 | 44.118 | 68 | 38 | 0 | 294 | 361 | 412 | 479 | 5.83e-12 | 67.0 |
| MS.gene25868.t1 | MTR_6g014150 | 40.823 | 316 | 153 | 5 | 10 | 292 | 4 | 318 | 1.07e-72 | 234 |
| MS.gene25868.t1 | MTR_6g014150 | 50.000 | 68 | 34 | 0 | 293 | 360 | 408 | 475 | 5.88e-14 | 73.2 |
| MS.gene25868.t1 | MTR_6g014270 | 39.564 | 321 | 158 | 5 | 11 | 296 | 5 | 324 | 1.35e-71 | 231 |
| MS.gene25868.t1 | MTR_6g014270 | 50.000 | 68 | 34 | 0 | 293 | 360 | 410 | 477 | 1.90e-14 | 74.7 |
| MS.gene25868.t1 | MTR_6g014310 | 40.952 | 315 | 152 | 5 | 11 | 292 | 9 | 322 | 9.91e-71 | 229 |
| MS.gene25868.t1 | MTR_6g014310 | 47.059 | 68 | 36 | 0 | 293 | 360 | 412 | 479 | 2.06e-12 | 68.6 |
| MS.gene25868.t1 | MTR_6g014187 | 38.438 | 320 | 163 | 7 | 10 | 296 | 7 | 325 | 1.49e-69 | 226 |
| MS.gene25868.t1 | MTR_6g014187 | 49.275 | 69 | 35 | 0 | 293 | 361 | 411 | 479 | 4.23e-14 | 73.9 |
| MS.gene25868.t1 | MTR_8g059425 | 37.898 | 314 | 163 | 6 | 10 | 292 | 7 | 319 | 2.46e-69 | 225 |
| MS.gene25868.t1 | MTR_8g059425 | 46.377 | 69 | 37 | 0 | 293 | 361 | 409 | 477 | 2.74e-12 | 68.2 |
| MS.gene25868.t1 | MTR_6g014200 | 40.625 | 320 | 156 | 7 | 10 | 296 | 4 | 322 | 1.04e-68 | 224 |
| MS.gene25868.t1 | MTR_6g014200 | 48.529 | 68 | 35 | 0 | 294 | 361 | 409 | 476 | 1.33e-13 | 72.4 |
| MS.gene25868.t1 | MTR_6g014300 | 40.397 | 302 | 160 | 6 | 9 | 292 | 8 | 307 | 5.98e-67 | 219 |
| MS.gene25868.t1 | MTR_6g014300 | 48.529 | 68 | 35 | 0 | 293 | 360 | 397 | 464 | 2.28e-15 | 77.4 |
| MS.gene25868.t1 | MTR_6g014170 | 36.943 | 314 | 152 | 4 | 9 | 292 | 6 | 303 | 1.64e-66 | 218 |
| MS.gene25868.t1 | MTR_6g014170 | 51.471 | 68 | 33 | 0 | 294 | 361 | 394 | 461 | 4.93e-14 | 73.6 |
| MS.gene25868.t1 | MTR_6g014050 | 42.006 | 319 | 151 | 7 | 11 | 296 | 9 | 326 | 5.25e-66 | 217 |
| MS.gene25868.t1 | MTR_6g014050 | 47.826 | 69 | 36 | 0 | 293 | 361 | 412 | 480 | 1.58e-13 | 72.0 |
| MS.gene25868.t1 | MTR_6g013680 | 34.492 | 374 | 170 | 7 | 59 | 360 | 3 | 373 | 1.21e-65 | 213 |
| MS.gene25868.t1 | MTR_6g011340 | 38.750 | 320 | 162 | 5 | 10 | 296 | 7 | 325 | 3.65e-65 | 214 |
| MS.gene25868.t1 | MTR_6g011340 | 45.588 | 68 | 37 | 0 | 294 | 361 | 412 | 479 | 2.03e-11 | 65.5 |
| MS.gene25868.t1 | MTR_6g013990 | 39.185 | 319 | 160 | 6 | 10 | 296 | 7 | 323 | 3.76e-65 | 214 |
| MS.gene25868.t1 | MTR_6g013990 | 52.239 | 67 | 32 | 0 | 294 | 360 | 410 | 476 | 1.45e-13 | 72.0 |
| MS.gene25868.t1 | MTR_8g007585 | 31.701 | 388 | 228 | 9 | 9 | 361 | 6 | 391 | 4.19e-63 | 207 |
| MS.gene25868.t1 | MTR_0199s0010 | 40.833 | 240 | 141 | 1 | 9 | 247 | 6 | 245 | 4.30e-63 | 203 |
| MS.gene25868.t1 | MTR_6g013920 | 38.170 | 317 | 165 | 5 | 11 | 296 | 8 | 324 | 2.72e-62 | 207 |
| MS.gene25868.t1 | MTR_6g013920 | 52.174 | 69 | 33 | 0 | 293 | 361 | 410 | 478 | 1.67e-15 | 78.2 |
| MS.gene25868.t1 | MTR_5g058320 | 37.975 | 316 | 153 | 5 | 11 | 296 | 8 | 310 | 8.13e-62 | 205 |
| MS.gene25868.t1 | MTR_6g013900 | 35.783 | 313 | 170 | 3 | 11 | 292 | 8 | 320 | 1.12e-58 | 197 |
| MS.gene25868.t1 | MTR_6g013900 | 50.725 | 69 | 34 | 0 | 293 | 361 | 410 | 478 | 5.54e-15 | 76.3 |
| MS.gene25868.t1 | MTR_7g011470 | 36.392 | 316 | 153 | 8 | 10 | 292 | 7 | 307 | 7.89e-55 | 187 |
| MS.gene25868.t1 | MTR_7g011470 | 44.928 | 69 | 38 | 0 | 293 | 361 | 397 | 465 | 9.32e-12 | 66.6 |
| MS.gene25868.t1 | MTR_6g014240 | 35.759 | 316 | 147 | 7 | 10 | 296 | 4 | 292 | 6.99e-54 | 184 |
| MS.gene25868.t1 | MTR_6g014240 | 44.286 | 70 | 39 | 0 | 293 | 362 | 378 | 447 | 1.19e-12 | 69.3 |
| MS.gene25868.t1 | MTR_7g011470 | 35.759 | 316 | 151 | 8 | 10 | 292 | 7 | 303 | 1.12e-52 | 181 |
| MS.gene25868.t1 | MTR_7g011470 | 44.928 | 69 | 38 | 0 | 293 | 361 | 393 | 461 | 9.59e-12 | 66.6 |
| MS.gene25868.t1 | MTR_6g014195 | 44.974 | 189 | 99 | 2 | 10 | 193 | 7 | 195 | 2.30e-49 | 165 |
| MS.gene25868.t1 | MTR_6g013435 | 31.596 | 307 | 135 | 5 | 129 | 361 | 1 | 306 | 2.61e-45 | 158 |
| MS.gene25868.t1 | MTR_3g479610 | 41.799 | 189 | 80 | 2 | 169 | 327 | 1 | 189 | 1.48e-40 | 145 |
| MS.gene25868.t1 | MTR_3g479610 | 55.405 | 74 | 33 | 0 | 293 | 366 | 244 | 317 | 1.33e-19 | 88.6 |
| MS.gene25868.t1 | MTR_8g043470 | 33.607 | 244 | 136 | 5 | 68 | 308 | 15 | 235 | 4.31e-40 | 146 |
| MS.gene25868.t1 | MTR_8g043470 | 47.826 | 69 | 36 | 0 | 293 | 361 | 309 | 377 | 2.72e-13 | 70.9 |
| MS.gene25868.t1 | MTR_6g014160 | 27.717 | 368 | 204 | 8 | 50 | 360 | 29 | 391 | 4.94e-37 | 138 |
| MS.gene25868.t1 | MTR_5g031830 | 29.296 | 355 | 196 | 10 | 12 | 328 | 11 | 348 | 3.57e-35 | 134 |
| MS.gene25868.t1 | MTR_5g031860 | 29.859 | 355 | 193 | 11 | 12 | 328 | 11 | 347 | 7.60e-34 | 130 |
| MS.gene25868.t1 | MTR_7g013200 | 30.100 | 299 | 172 | 7 | 12 | 292 | 4 | 283 | 2.34e-33 | 129 |
| MS.gene25868.t1 | MTR_5g031840 | 29.155 | 367 | 197 | 12 | 10 | 336 | 2 | 345 | 5.26e-33 | 128 |
| MS.gene25868.t1 | MTR_0475s0020 | 50.000 | 124 | 56 | 2 | 9 | 126 | 6 | 129 | 9.40e-33 | 122 |
| MS.gene25868.t1 | MTR_7g013220 | 32.026 | 306 | 168 | 8 | 12 | 292 | 4 | 294 | 3.50e-32 | 125 |
| MS.gene25868.t1 | MTR_0891s0010 | 42.169 | 166 | 66 | 2 | 192 | 327 | 1 | 166 | 1.91e-31 | 120 |
| MS.gene25868.t1 | MTR_0891s0010 | 52.703 | 74 | 35 | 0 | 293 | 366 | 221 | 294 | 4.08e-20 | 89.7 |
| MS.gene25868.t1 | MTR_7g013240 | 29.373 | 303 | 168 | 6 | 12 | 292 | 5 | 283 | 3.23e-27 | 112 |
| MS.gene25868.t1 | MTR_7g013180 | 25.325 | 308 | 183 | 6 | 12 | 292 | 4 | 291 | 1.24e-26 | 110 |
| MS.gene25868.t1 | MTR_7g013260 | 29.276 | 304 | 168 | 7 | 12 | 292 | 5 | 284 | 2.31e-26 | 109 |
| MS.gene25868.t1 | MTR_4g064987 | 28.205 | 312 | 175 | 9 | 11 | 296 | 6 | 294 | 4.27e-25 | 106 |
| MS.gene25868.t1 | MTR_6g013890 | 30.631 | 222 | 91 | 4 | 169 | 327 | 19 | 240 | 6.49e-25 | 102 |
| MS.gene25868.t1 | MTR_0477s0010 | 35.928 | 167 | 93 | 5 | 129 | 291 | 1 | 157 | 2.46e-23 | 99.4 |
| MS.gene25868.t1 | MTR_0477s0010 | 44.928 | 69 | 38 | 0 | 293 | 361 | 248 | 316 | 2.11e-12 | 67.8 |
| MS.gene25868.t1 | MTR_3g069710 | 27.476 | 313 | 179 | 9 | 14 | 300 | 13 | 303 | 4.07e-23 | 100 |
| MS.gene25868.t1 | MTR_3g069690 | 27.653 | 311 | 176 | 10 | 13 | 298 | 8 | 294 | 1.04e-22 | 99.4 |
| MS.gene25868.t1 | MTR_4g064987 | 27.445 | 317 | 165 | 10 | 11 | 296 | 6 | 288 | 1.36e-22 | 99.0 |
| MS.gene25868.t1 | MTR_2086s0010 | 56.338 | 71 | 31 | 0 | 293 | 363 | 103 | 173 | 4.56e-22 | 92.4 |
| MS.gene25868.t1 | MTR_1996s0010 | 56.338 | 71 | 31 | 0 | 293 | 363 | 103 | 173 | 4.56e-22 | 92.4 |
| MS.gene25868.t1 | MTR_6g014185 | 26.131 | 398 | 134 | 13 | 50 | 361 | 21 | 344 | 5.89e-22 | 96.3 |
| MS.gene25868.t1 | MTR_7g080950 | 27.987 | 318 | 158 | 11 | 11 | 290 | 4 | 288 | 1.31e-21 | 96.3 |
| MS.gene25868.t1 | MTR_5g072830 | 28.431 | 306 | 161 | 12 | 13 | 289 | 10 | 286 | 1.78e-21 | 95.5 |
| MS.gene25868.t1 | MTR_6g038240 | 25.321 | 312 | 184 | 8 | 9 | 292 | 7 | 297 | 2.54e-21 | 95.1 |
| MS.gene25868.t1 | MTR_7g080940 | 25.078 | 319 | 174 | 9 | 9 | 292 | 7 | 295 | 1.20e-20 | 93.2 |
| MS.gene25868.t1 | MTR_5g072840 | 28.525 | 305 | 160 | 11 | 13 | 288 | 10 | 285 | 2.73e-20 | 92.0 |
| MS.gene25868.t1 | MTR_5g035580 | 25.000 | 324 | 182 | 11 | 1 | 292 | 1 | 295 | 7.27e-20 | 90.9 |
| MS.gene25868.t1 | MTR_8g088560 | 25.073 | 343 | 207 | 10 | 13 | 326 | 10 | 331 | 8.22e-20 | 90.9 |
| MS.gene25868.t1 | MTR_7g080935 | 25.633 | 316 | 176 | 10 | 9 | 292 | 7 | 295 | 8.81e-20 | 90.9 |
| MS.gene25868.t1 | MTR_5g072810 | 27.303 | 304 | 172 | 12 | 13 | 290 | 12 | 292 | 2.03e-19 | 89.7 |
| MS.gene25868.t1 | MTR_6g038230 | 25.890 | 309 | 178 | 7 | 13 | 292 | 11 | 297 | 2.40e-19 | 89.4 |
| MS.gene25868.t1 | MTR_7g080900 | 25.633 | 316 | 165 | 11 | 13 | 290 | 12 | 295 | 2.93e-19 | 89.4 |
| MS.gene25868.t1 | MTR_6g038300 | 25.000 | 356 | 200 | 10 | 7 | 326 | 5 | 329 | 8.49e-19 | 87.8 |
| MS.gene25868.t1 | MTR_6g038200 | 26.101 | 318 | 166 | 9 | 13 | 292 | 11 | 297 | 1.19e-18 | 87.4 |
| MS.gene25868.t1 | MTR_6g038220 | 26.730 | 318 | 171 | 10 | 9 | 292 | 7 | 296 | 3.27e-18 | 85.9 |
| MS.gene25868.t1 | MTR_5g072860 | 24.675 | 308 | 187 | 11 | 13 | 292 | 18 | 308 | 4.33e-18 | 85.9 |
| MS.gene25868.t1 | MTR_3g084540 | 21.892 | 370 | 234 | 9 | 9 | 340 | 2 | 354 | 1.59e-17 | 84.0 |
| MS.gene25868.t1 | MTR_3g084530 | 22.642 | 371 | 230 | 11 | 9 | 340 | 2 | 354 | 3.47e-17 | 83.2 |
| MS.gene25868.t1 | MTR_6g014190 | 40.310 | 129 | 48 | 5 | 192 | 292 | 1 | 128 | 4.92e-17 | 80.9 |
| MS.gene25868.t1 | MTR_6g014190 | 51.471 | 68 | 33 | 0 | 293 | 360 | 218 | 285 | 1.75e-15 | 76.6 |
| MS.gene25868.t1 | MTR_5g035560 | 23.962 | 313 | 175 | 11 | 13 | 292 | 11 | 293 | 5.99e-17 | 82.4 |
| MS.gene25868.t1 | MTR_3g084520 | 23.545 | 378 | 218 | 12 | 9 | 340 | 2 | 354 | 9.79e-17 | 81.6 |
| MS.gene25868.t1 | MTR_8g064870 | 23.547 | 327 | 192 | 11 | 6 | 296 | 3 | 307 | 1.96e-16 | 80.9 |
| MS.gene25868.t1 | MTR_3g031400 | 25.987 | 304 | 168 | 12 | 13 | 290 | 18 | 290 | 2.27e-16 | 80.5 |
| MS.gene25868.t1 | MTR_3g049970 | 23.622 | 381 | 230 | 15 | 9 | 351 | 4 | 361 | 4.39e-16 | 79.7 |
| MS.gene25868.t1 | MTR_1g107315 | 23.810 | 315 | 193 | 10 | 13 | 296 | 8 | 306 | 5.69e-16 | 79.3 |
| MS.gene25868.t1 | MTR_1g032490 | 23.344 | 317 | 192 | 11 | 13 | 296 | 10 | 308 | 6.83e-16 | 79.3 |
| MS.gene25868.t1 | MTR_3g031450 | 25.325 | 308 | 167 | 12 | 13 | 290 | 18 | 292 | 1.43e-15 | 78.2 |
| MS.gene25868.t1 | MTR_1g107350 | 22.917 | 336 | 207 | 11 | 9 | 310 | 3 | 320 | 2.48e-15 | 77.4 |
| MS.gene25868.t1 | MTR_1g107380 | 27.445 | 317 | 170 | 13 | 13 | 290 | 13 | 308 | 5.56e-15 | 76.3 |
| MS.gene25868.t1 | MTR_8g064880 | 22.840 | 324 | 202 | 10 | 6 | 296 | 1 | 309 | 1.72e-14 | 75.1 |
| MS.gene25868.t1 | MTR_5g075440 | 24.837 | 306 | 181 | 9 | 13 | 290 | 10 | 294 | 8.98e-14 | 72.8 |
| MS.gene25868.t1 | MTR_1g107375 | 22.222 | 315 | 193 | 9 | 13 | 296 | 8 | 301 | 4.72e-13 | 70.5 |
| MS.gene25868.t1 | MTR_8g083290 | 24.765 | 319 | 178 | 12 | 12 | 290 | 2 | 298 | 6.81e-13 | 70.1 |
| MS.gene25868.t1 | MTR_7g070660 | 24.138 | 319 | 177 | 11 | 13 | 292 | 11 | 303 | 1.04e-12 | 69.3 |
| MS.gene25868.t1 | MTR_1g107285 | 22.857 | 385 | 227 | 13 | 6 | 351 | 1 | 354 | 5.24e-12 | 67.4 |
| MS.gene25868.t1 | MTR_5g066390 | 44.118 | 68 | 38 | 0 | 293 | 360 | 146 | 213 | 6.30e-12 | 65.1 |
| MS.gene25868.t1 | MTR_7g071050 | 25.342 | 292 | 166 | 11 | 13 | 292 | 13 | 264 | 2.02e-11 | 65.5 |
| MS.gene25868.t1 | MTR_4g095008 | 23.885 | 381 | 205 | 15 | 3 | 336 | 1 | 343 | 2.99e-11 | 65.1 |
| MS.gene25868.t1 | MTR_5g098960 | 20.365 | 329 | 212 | 10 | 10 | 304 | 4 | 316 | 3.50e-11 | 64.7 |
| MS.gene25868.t1 | MTR_7g106850 | 64.103 | 39 | 13 | 1 | 16 | 53 | 142 | 180 | 4.09e-11 | 62.0 |
| MS.gene25868.t1 | MTR_7g067330 | 25.714 | 315 | 190 | 12 | 10 | 307 | 6 | 293 | 4.99e-11 | 64.3 |
| MS.gene25868.t1 | MTR_8g027885 | 25.163 | 306 | 178 | 10 | 12 | 292 | 17 | 296 | 7.27e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25868.t1 | AT1G22360 | 44.795 | 317 | 146 | 1 | 9 | 296 | 6 | 322 | 2.58e-98 | 300 |
| MS.gene25868.t1 | AT1G22360 | 44.795 | 317 | 146 | 1 | 9 | 296 | 6 | 322 | 3.05e-98 | 300 |
| MS.gene25868.t1 | AT1G22370 | 39.944 | 358 | 181 | 2 | 1 | 329 | 1 | 353 | 3.32e-95 | 292 |
| MS.gene25868.t1 | AT1G22340 | 42.154 | 325 | 159 | 1 | 1 | 296 | 1 | 325 | 4.67e-94 | 290 |
| MS.gene25868.t1 | AT1G22400 | 43.344 | 323 | 151 | 4 | 1 | 292 | 1 | 322 | 1.71e-92 | 285 |
| MS.gene25868.t1 | AT1G22380 | 39.660 | 353 | 184 | 2 | 6 | 329 | 6 | 358 | 8.85e-91 | 281 |
| MS.gene25868.t1 | AT1G78270 | 40.190 | 316 | 157 | 5 | 7 | 292 | 7 | 320 | 7.79e-80 | 253 |
| MS.gene25868.t1 | AT1G78270 | 51.471 | 68 | 32 | 1 | 298 | 364 | 416 | 483 | 9.03e-14 | 72.8 |
| MS.gene25868.t1 | AT3G02100 | 28.344 | 314 | 179 | 9 | 11 | 292 | 11 | 310 | 1.15e-29 | 119 |
| MS.gene25868.t1 | AT5G38040 | 30.539 | 334 | 180 | 12 | 21 | 326 | 18 | 327 | 5.97e-28 | 114 |
| MS.gene25868.t1 | AT2G36970 | 29.042 | 334 | 185 | 10 | 9 | 304 | 6 | 325 | 1.64e-27 | 113 |
| MS.gene25868.t1 | AT3G46650 | 30.351 | 313 | 147 | 9 | 11 | 296 | 8 | 276 | 1.86e-26 | 109 |
| MS.gene25868.t1 | AT3G46660 | 32.710 | 321 | 167 | 11 | 3 | 296 | 1 | 299 | 4.14e-26 | 108 |
| MS.gene25868.t1 | AT5G38010 | 30.671 | 313 | 170 | 11 | 10 | 296 | 7 | 298 | 2.25e-25 | 107 |
| MS.gene25868.t1 | AT4G15490 | 26.121 | 379 | 220 | 11 | 9 | 351 | 4 | 358 | 3.60e-25 | 106 |
| MS.gene25868.t1 | AT1G22370 | 32.778 | 180 | 92 | 1 | 179 | 329 | 4 | 183 | 4.80e-25 | 103 |
| MS.gene25868.t1 | AT3G21560 | 26.349 | 315 | 191 | 8 | 12 | 296 | 11 | 314 | 8.16e-25 | 105 |
| MS.gene25868.t1 | AT3G11340 | 27.273 | 363 | 211 | 13 | 11 | 348 | 7 | 341 | 1.02e-24 | 105 |
| MS.gene25868.t1 | AT3G46690 | 31.392 | 309 | 169 | 9 | 10 | 296 | 6 | 293 | 1.11e-24 | 105 |
| MS.gene25868.t1 | AT5G59590 | 30.990 | 313 | 156 | 12 | 10 | 292 | 7 | 289 | 2.06e-24 | 104 |
| MS.gene25868.t1 | AT5G59580 | 29.870 | 308 | 163 | 10 | 11 | 292 | 7 | 287 | 2.71e-23 | 100 |
| MS.gene25868.t1 | AT3G46670 | 29.508 | 366 | 199 | 15 | 13 | 348 | 9 | 345 | 5.01e-22 | 97.4 |
| MS.gene25868.t1 | AT3G46700 | 28.981 | 314 | 165 | 10 | 10 | 296 | 6 | 288 | 1.40e-21 | 95.9 |
| MS.gene25868.t1 | AT4G15500 | 25.000 | 376 | 223 | 12 | 9 | 351 | 5 | 354 | 1.58e-21 | 95.9 |
| MS.gene25868.t1 | AT2G28080 | 25.364 | 343 | 209 | 10 | 17 | 328 | 22 | 348 | 6.57e-21 | 94.4 |
| MS.gene25868.t1 | AT5G05900 | 26.797 | 306 | 179 | 8 | 13 | 292 | 8 | 294 | 2.39e-20 | 92.4 |
| MS.gene25868.t1 | AT2G30140 | 27.124 | 306 | 180 | 10 | 9 | 292 | 9 | 293 | 4.48e-20 | 91.7 |
| MS.gene25868.t1 | AT5G05880 | 26.490 | 302 | 179 | 8 | 13 | 292 | 8 | 288 | 4.60e-20 | 91.7 |
| MS.gene25868.t1 | AT3G46680 | 29.245 | 318 | 164 | 14 | 10 | 296 | 6 | 293 | 1.22e-19 | 90.5 |
| MS.gene25868.t1 | AT3G46720 | 30.323 | 310 | 163 | 10 | 9 | 292 | 5 | 287 | 1.53e-19 | 90.1 |
| MS.gene25868.t1 | AT2G26480 | 29.355 | 310 | 170 | 10 | 10 | 296 | 5 | 288 | 1.70e-19 | 89.7 |
| MS.gene25868.t1 | AT5G05890 | 25.937 | 347 | 202 | 10 | 13 | 327 | 8 | 331 | 2.23e-18 | 86.7 |
| MS.gene25868.t1 | AT2G43840 | 25.641 | 312 | 166 | 11 | 13 | 290 | 7 | 286 | 3.21e-18 | 86.3 |
| MS.gene25868.t1 | AT2G43840 | 25.321 | 312 | 167 | 11 | 13 | 290 | 7 | 286 | 2.86e-17 | 83.2 |
| MS.gene25868.t1 | AT3G55700 | 25.163 | 306 | 180 | 11 | 13 | 292 | 8 | 290 | 7.85e-17 | 82.0 |
| MS.gene25868.t1 | AT2G31790 | 23.398 | 359 | 208 | 10 | 6 | 326 | 1 | 330 | 8.22e-17 | 82.0 |
| MS.gene25868.t1 | AT3G55710 | 23.718 | 312 | 181 | 11 | 13 | 292 | 8 | 294 | 1.07e-16 | 81.6 |
| MS.gene25868.t1 | AT4G15480 | 24.127 | 315 | 190 | 11 | 13 | 296 | 19 | 315 | 2.03e-16 | 80.9 |
| MS.gene25868.t1 | AT5G05870 | 26.603 | 312 | 180 | 10 | 13 | 296 | 8 | 298 | 4.52e-16 | 79.7 |
| MS.gene25868.t1 | AT2G31750 | 23.418 | 316 | 189 | 8 | 11 | 296 | 6 | 298 | 5.39e-16 | 79.3 |
| MS.gene25868.t1 | AT2G31750 | 23.418 | 316 | 189 | 8 | 11 | 296 | 6 | 298 | 6.60e-16 | 79.3 |
| MS.gene25868.t1 | AT4G14090 | 23.944 | 355 | 211 | 11 | 1 | 323 | 1 | 328 | 1.44e-15 | 78.2 |
| MS.gene25868.t1 | AT5G37950 | 26.814 | 317 | 179 | 10 | 29 | 318 | 2 | 292 | 1.50e-15 | 77.4 |
| MS.gene25868.t1 | AT4G15550 | 24.281 | 313 | 191 | 11 | 12 | 296 | 12 | 306 | 1.51e-15 | 78.2 |
| MS.gene25868.t1 | AT2G43820 | 24.038 | 312 | 177 | 10 | 10 | 290 | 4 | 286 | 8.77e-15 | 75.9 |
| MS.gene25868.t1 | AT1G05675 | 22.443 | 352 | 204 | 11 | 13 | 326 | 6 | 326 | 3.06e-14 | 74.3 |
| MS.gene25868.t1 | AT5G05860 | 25.914 | 301 | 180 | 8 | 13 | 292 | 9 | 287 | 3.24e-14 | 73.9 |
| MS.gene25868.t1 | AT2G30150 | 25.000 | 300 | 179 | 10 | 17 | 292 | 1 | 278 | 3.84e-14 | 73.9 |
| MS.gene25868.t1 | AT1G05680 | 22.956 | 318 | 178 | 10 | 13 | 292 | 6 | 294 | 6.64e-13 | 70.1 |
| MS.gene25868.t1 | AT1G05530 | 24.324 | 333 | 189 | 14 | 11 | 311 | 3 | 304 | 4.61e-12 | 67.4 |
Find 75 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATATATGATGGACTTA+TGG | 0.231044 | 3.2:-69839062 | MS.gene25868:CDS |
| ATTGGTCCACTTCAATTTCT+AGG | 0.240721 | 3.2:-69837304 | MS.gene25868:intron |
| GCATTGCAGAGCAACAATTT+TGG | 0.256872 | 3.2:-69839009 | MS.gene25868:CDS |
| TGATTTCTTTAGGTTATTAA+AGG | 0.258092 | 3.2:-69836660 | MS.gene25868:CDS |
| GGGAATAGGGATGGATATTA+AGG | 0.258230 | 3.2:-69836822 | MS.gene25868:CDS |
| GTTGTATATGTTGGGATTTA+TGG | 0.258310 | 3.2:+69837327 | None:intergenic |
| CTTCTTACAATGATTTCTTT+AGG | 0.272275 | 3.2:-69836670 | MS.gene25868:CDS |
| TGCCTCTGCTTGTGGGTTGA+TGG | 0.274121 | 3.2:-69838984 | MS.gene25868:CDS |
| ATTATATATGATGGACTTAT+GGG | 0.292263 | 3.2:-69839061 | MS.gene25868:CDS |
| TGAAGTTCTTGATGCTCTTA+TGG | 0.297884 | 3.2:-69837350 | MS.gene25868:CDS |
| ATAAGCACAACTTGGGGAAT+AGG | 0.336581 | 3.2:-69836836 | MS.gene25868:CDS |
| TCAGTGATATATATTAATTA+TGG | 0.341235 | 3.2:-69837178 | MS.gene25868:CDS |
| TGTAGATGTTGCAAAGGATT+TGG | 0.350911 | 3.2:-69839032 | MS.gene25868:CDS |
| TTCCTGGGGTCCATTCTAGA+TGG | 0.378864 | 3.2:+69837518 | None:intergenic |
| TTTGGACTGCCTCTGCTTGT+GGG | 0.391545 | 3.2:-69838991 | MS.gene25868:CDS |
| AAACGTTTGGTAAAATCTCT+TGG | 0.402346 | 3.2:-69839274 | MS.gene25868:CDS |
| CATTGTTCACAAAGGTTATG+TGG | 0.406840 | 3.2:+69839308 | None:intergenic |
| TGTGGAAACCAAGTTTGTTA+AGG | 0.407262 | 3.2:+69839326 | None:intergenic |
| TAAGCACAACTTGGGGAATA+GGG | 0.409390 | 3.2:-69836835 | MS.gene25868:CDS |
| GCCTCTGCTTGTGGGTTGAT+GGG | 0.410209 | 3.2:-69838983 | MS.gene25868:CDS |
| GTAGATGTTGCAAAGGATTT+GGG | 0.413935 | 3.2:-69839031 | MS.gene25868:CDS |
| GAAATGATCAAGGGTGAAAA+GGG | 0.414223 | 3.2:-69836761 | MS.gene25868:CDS |
| ATAGTCTCAAACCTAAAATC+TGG | 0.420330 | 3.2:+69839229 | None:intergenic |
| GCTAAAATCCTTAACAAACT+TGG | 0.430793 | 3.2:-69839334 | MS.gene25868:CDS |
| TGAATTCAACCACAAACGTT+TGG | 0.432420 | 3.2:-69839287 | MS.gene25868:CDS |
| GGAAATGATCAAGGGTGAAA+AGG | 0.440308 | 3.2:-69836762 | MS.gene25868:CDS |
| TTCTCCACAAGCTCTTTCAA+TGG | 0.441645 | 3.2:+69839121 | None:intergenic |
| GTGGACTTGTTGAAGGTTGT+AGG | 0.441801 | 3.2:-69839159 | MS.gene25868:CDS |
| ATCAAACTATAACCTTTGTA+TGG | 0.448179 | 3.2:+69838920 | None:intergenic |
| ACGTGACCTTGTGCTGGAAA+TGG | 0.448261 | 3.2:+69839376 | None:intergenic |
| TATTAAATGGTTAGACCAAT+GGG | 0.452336 | 3.2:-69837209 | MS.gene25868:intron |
| TCTGATGGTGGCAAACCATC+TGG | 0.452997 | 3.2:+69839205 | None:intergenic |
| TTATATTACTGATGGCTCCT+TGG | 0.462933 | 3.2:-69837545 | MS.gene25868:CDS |
| GGTTGTAGGAAACATTGTTA+TGG | 0.470472 | 3.2:-69839145 | MS.gene25868:CDS |
| AGCTTGGAAGGTCTCTCATT+CGG | 0.477688 | 3.2:+69837485 | None:intergenic |
| GTTACATCTATTATATATGA+TGG | 0.480488 | 3.2:-69839070 | MS.gene25868:CDS |
| CCTTGGATGTCCATCTAGAA+TGG | 0.491985 | 3.2:-69837528 | MS.gene25868:CDS |
| GGGTTTACGTGACCTTGTGC+TGG | 0.492068 | 3.2:+69839370 | None:intergenic |
| GTGGTTGTTCTAACAAAGCT+TGG | 0.493929 | 3.2:+69837469 | None:intergenic |
| TGGACCAATGTTGTATATGT+TGG | 0.500052 | 3.2:+69837318 | None:intergenic |
| TTAATATATATCACTGAAGA+AGG | 0.500769 | 3.2:+69837184 | None:intergenic |
| GGACCAATGTTGTATATGTT+GGG | 0.506632 | 3.2:+69837319 | None:intergenic |
| TAGGTATATAAGCACAACTT+GGG | 0.523212 | 3.2:-69836843 | MS.gene25868:CDS |
| GATGAAAGTTATATTACTGA+TGG | 0.537450 | 3.2:-69837553 | MS.gene25868:CDS |
| GTCCATCTAGAATGGACCCC+AGG | 0.543365 | 3.2:-69837520 | MS.gene25868:CDS |
| AAAACTGATTTCATCTAATG+TGG | 0.543689 | 3.2:+69837450 | None:intergenic |
| AATGCTACACAAAGCATTGG+TGG | 0.546367 | 3.2:-69839178 | MS.gene25868:CDS |
| AGCATTGGTGGACTTGTTGA+AGG | 0.546579 | 3.2:-69839166 | MS.gene25868:CDS |
| GTATTAAATGGTTAGACCAA+TGG | 0.546865 | 3.2:-69837210 | MS.gene25868:intron |
| TGGTCCATTGAAAGAGCTTG+TGG | 0.547074 | 3.2:-69839125 | MS.gene25868:CDS |
| GTAGTAGAAGCTGCTAAACC+AGG | 0.552938 | 3.2:-69836698 | MS.gene25868:CDS |
| TTGTTCTAACAAAGCTTGGA+AGG | 0.553738 | 3.2:+69837473 | None:intergenic |
| ACTTGTGAAGGAAATGATCA+AGG | 0.563405 | 3.2:-69836771 | MS.gene25868:CDS |
| GAAAATGCTACACAAAGCAT+TGG | 0.567187 | 3.2:-69839181 | MS.gene25868:CDS |
| AGAAATATGCTTCCATACAA+AGG | 0.567354 | 3.2:-69838932 | MS.gene25868:intron |
| CACAACTTGGGGAATAGGGA+TGG | 0.568850 | 3.2:-69836831 | MS.gene25868:CDS |
| GGATGATGTGAAAAGAGAAG+AGG | 0.572156 | 3.2:-69836801 | MS.gene25868:CDS |
| AGAGGTAACTGAACTTGTGA+AGG | 0.575445 | 3.2:-69836783 | MS.gene25868:CDS |
| TCCCATCAACCCACAAGCAG+AGG | 0.584532 | 3.2:+69838982 | None:intergenic |
| GTTGAATTCATTGTTCACAA+AGG | 0.589156 | 3.2:+69839300 | None:intergenic |
| TTGTTACCTAGAAATTGAAG+TGG | 0.589719 | 3.2:+69837298 | None:intergenic |
| AATCCCAACATATACAACAT+TGG | 0.596406 | 3.2:-69837322 | MS.gene25868:CDS |
| GTAGGTATATAAGCACAACT+TGG | 0.603550 | 3.2:-69836844 | MS.gene25868:intron |
| TGTGTACCATTTCCAGCACA+AGG | 0.607339 | 3.2:-69839382 | MS.gene25868:CDS |
| AGGTTTGAGACTATACCAGA+TGG | 0.615743 | 3.2:-69839220 | MS.gene25868:CDS |
| TCACTGAAGAAGGTTCCCAT+TGG | 0.627473 | 3.2:+69837194 | None:intergenic |
| CTTGTGAAGGAAATGATCAA+GGG | 0.633603 | 3.2:-69836770 | MS.gene25868:CDS |
| TATATAATAGATGTAACTTG+AGG | 0.635324 | 3.2:+69839076 | None:intergenic |
| ATTTGCTGTAGATGTTGCAA+AGG | 0.636876 | 3.2:-69839038 | MS.gene25868:CDS |
| AAATGATCAAGGGTGAAAAG+GGG | 0.646708 | 3.2:-69836760 | MS.gene25868:CDS |
| CCATTCTAGATGGACATCCA+AGG | 0.651684 | 3.2:+69837528 | None:intergenic |
| TCATTGTAAGAAGAACCTCC+TGG | 0.656049 | 3.2:+69836680 | None:intergenic |
| AATGGTACACAAACTACATG+AGG | 0.663412 | 3.2:+69839394 | None:intergenic |
| AGGTATATAAGCACAACTTG+GGG | 0.681367 | 3.2:-69836842 | MS.gene25868:CDS |
| GTAGAAGCTGCTAAACCAGG+AGG | 0.695811 | 3.2:-69836695 | MS.gene25868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAATATCAAATG+TGG | - | chr3.2:69837615-69837634 | MS.gene25868:intron | 10.0% |
| !! | ATAAAATATTCAATCAAAAT+TGG | + | chr3.2:69838453-69838472 | None:intergenic | 10.0% |
| !! | TAAAAATAAATATCAAATGT+GGG | - | chr3.2:69837616-69837635 | MS.gene25868:intron | 10.0% |
| !! | AATAATTTGAATTGAAACTT+AGG | - | chr3.2:69838340-69838359 | MS.gene25868:intron | 15.0% |
| !! | ATAATTTGAATTGAAACTTA+GGG | - | chr3.2:69838341-69838360 | MS.gene25868:intron | 15.0% |
| !! | ATGATTTAACATGTATTAAA+TGG | - | chr3.2:69838836-69838855 | MS.gene25868:intron | 15.0% |
| !! | TAAGTTTCAATTCAAATTAT+TGG | + | chr3.2:69838341-69838360 | None:intergenic | 15.0% |
| !! | TCAGTGATATATATTAATTA+TGG | - | chr3.2:69838880-69838899 | MS.gene25868:intron | 15.0% |
| !! | TTAAAAAAGAAAAATCTCAT+CGG | - | chr3.2:69837679-69837698 | MS.gene25868:intron | 15.0% |
| !! | TTGATAGAAATAAGTAAAAT+TGG | + | chr3.2:69838125-69838144 | None:intergenic | 15.0% |
| !!! | AAACTAAACTCTTTTAAATA+AGG | - | chr3.2:69837521-69837540 | MS.gene25868:CDS | 15.0% |
| !!! | AGTAAAATTGGTTTAATATA+AGG | + | chr3.2:69838113-69838132 | None:intergenic | 15.0% |
| !!! | ATTTTATGAACTAAATTAAC+TGG | - | chr3.2:69837247-69837266 | MS.gene25868:intron | 15.0% |
| !!! | TGAATTAATTCGATTTTTTA+TGG | - | chr3.2:69837989-69838008 | MS.gene25868:intron | 15.0% |
| !!! | TTAAGAAATTTTGTTTTTGT+TGG | + | chr3.2:69837577-69837596 | None:intergenic | 15.0% |
| !! | ATAATTCTAATACTAACTCA+TGG | - | chr3.2:69837360-69837379 | MS.gene25868:CDS | 20.0% |
| !! | GTTACATCTATTATATATGA+TGG | - | chr3.2:69836988-69837007 | MS.gene25868:intron | 20.0% |
| !! | TAACTTATAATCAGATAAAG+AGG | - | chr3.2:69838388-69838407 | MS.gene25868:intron | 20.0% |
| !! | TACTAAAAATTGAGACATAT+AGG | - | chr3.2:69837184-69837203 | MS.gene25868:CDS | 20.0% |
| !! | TATATAATAGATGTAACTTG+AGG | + | chr3.2:69836985-69837004 | None:intergenic | 20.0% |
| !! | TGAACGTAAAAAATCAATAT+TGG | + | chr3.2:69838255-69838274 | None:intergenic | 20.0% |
| !! | TTAATATATATCACTGAAGA+AGG | + | chr3.2:69838877-69838896 | None:intergenic | 20.0% |
| !!! | AAAAGCATTCTTAAATTAGA+TGG | + | chr3.2:69837929-69837948 | None:intergenic | 20.0% |
| !!! | AACATTTTAATGAATTTGCT+TGG | - | chr3.2:69838926-69838945 | MS.gene25868:intron | 20.0% |
| !!! | ACATTTTAATGAATTTGCTT+GGG | - | chr3.2:69838927-69838946 | MS.gene25868:intron | 20.0% |
| !!! | AGAATTTTTAGATGAAGTTA+AGG | - | chr3.2:69839029-69839048 | MS.gene25868:CDS | 20.0% |
| !!! | ATAGTAAATTACCATTTTTG+TGG | - | chr3.2:69838959-69838978 | MS.gene25868:CDS | 20.0% |
| !!! | ATCAATCTTTTGCTAATTTT+TGG | + | chr3.2:69837488-69837507 | None:intergenic | 20.0% |
| !!! | ATTATATATGATGGACTTAT+GGG | - | chr3.2:69836997-69837016 | MS.gene25868:intron | 20.0% |
| !!! | GACTATTTTAACTTTTTTTG+AGG | - | chr3.2:69837311-69837330 | MS.gene25868:CDS | 20.0% |
| !!! | TATTATATATGATGGACTTA+TGG | - | chr3.2:69836996-69837015 | MS.gene25868:intron | 20.0% |
| !!! | TATTTTAACTTTTTTTGAGG+TGG | - | chr3.2:69837314-69837333 | MS.gene25868:CDS | 20.0% |
| !!! | TCTTTTTTAATAACTTCTGA+TGG | + | chr3.2:69837669-69837688 | None:intergenic | 20.0% |
| !!! | TGATTTCTTTAGGTTATTAA+AGG | - | chr3.2:69839398-69839417 | MS.gene25868:CDS | 20.0% |
| !!! | TTTCAATTTAGTCTTTGAAA+CGG | + | chr3.2:69837393-69837412 | None:intergenic | 20.0% |
| ! | AAAAATTCTTGTGACAATGA+AGG | + | chr3.2:69839018-69839037 | None:intergenic | 25.0% |
| ! | ATAGAGGTTACATAATAACT+TGG | - | chr3.2:69839052-69839071 | MS.gene25868:CDS | 25.0% |
| ! | ATCAAACTATAACCTTTGTA+TGG | + | chr3.2:69837141-69837160 | None:intergenic | 25.0% |
| ! | CTTCTTACAATGATTTCTTT+AGG | - | chr3.2:69839388-69839407 | MS.gene25868:CDS | 25.0% |
| ! | GATGAAAGTTATATTACTGA+TGG | - | chr3.2:69838505-69838524 | MS.gene25868:intron | 25.0% |
| ! | TAAATAAGGCTATCAATCAT+TGG | - | chr3.2:69837535-69837554 | MS.gene25868:CDS | 25.0% |
| ! | TATTAAATGGTTAGACCAAT+GGG | - | chr3.2:69838849-69838868 | MS.gene25868:intron | 25.0% |
| ! | TCTTCACAAAAAATCTATAC+AGG | - | chr3.2:69837793-69837812 | MS.gene25868:intron | 25.0% |
| !! | AAAACTGATTTCATCTAATG+TGG | + | chr3.2:69838611-69838630 | None:intergenic | 25.0% |
| !! | AATTTTCCTGAAAAGGAAAA+TGG | - | chr3.2:69838781-69838800 | MS.gene25868:intron | 25.0% |
| !! | ATCAGATTTTACTTATCTCT+TGG | - | chr3.2:69838024-69838043 | MS.gene25868:intron | 25.0% |
| !! | TTTCTATCAAGAAAAAGTGT+TGG | - | chr3.2:69838135-69838154 | MS.gene25868:intron | 25.0% |
| !!! | ATTTTAATGAATTTGCTTGG+GGG | - | chr3.2:69838929-69838948 | MS.gene25868:intron | 25.0% |
| !!! | ATTTTAGCTAATTGCATGAA+AGG | + | chr3.2:69836712-69836731 | None:intergenic | 25.0% |
| !!! | CATTTTAATGAATTTGCTTG+GGG | - | chr3.2:69838928-69838947 | MS.gene25868:intron | 25.0% |
| !!! | GGGCAAATTTTTTTTTCAAT+TGG | - | chr3.2:69838361-69838380 | MS.gene25868:intron | 25.0% |
| !!! | TACCATTTTTGTGGATAAAT+AGG | - | chr3.2:69838968-69838987 | MS.gene25868:CDS | 25.0% |
| !!! | TTAGATGAAATCAGTTTTGT+TGG | - | chr3.2:69838613-69838632 | MS.gene25868:intron | 25.0% |
| !!! | TTTTAGCTAATTGCATGAAA+GGG | + | chr3.2:69836711-69836730 | None:intergenic | 25.0% |
| AAACGTTTGGTAAAATCTCT+TGG | - | chr3.2:69836784-69836803 | MS.gene25868:CDS | 30.0% | |
| AATCCCAACATATACAACAT+TGG | - | chr3.2:69838736-69838755 | MS.gene25868:intron | 30.0% | |
| AGAAATATGCTTCCATACAA+AGG | - | chr3.2:69837126-69837145 | MS.gene25868:intron | 30.0% | |
| ATAGTCTCAAACCTAAAATC+TGG | + | chr3.2:69836832-69836851 | None:intergenic | 30.0% | |
| GCTAAAATCCTTAACAAACT+TGG | - | chr3.2:69836724-69836743 | MS.gene25868:CDS | 30.0% | |
| GTATTAAATGGTTAGACCAA+TGG | - | chr3.2:69838848-69838867 | MS.gene25868:intron | 30.0% | |
| GTTGAATTCATTGTTCACAA+AGG | + | chr3.2:69836761-69836780 | None:intergenic | 30.0% | |
| GTTGTATATGTTGGGATTTA+TGG | + | chr3.2:69838734-69838753 | None:intergenic | 30.0% | |
| TAGGTATATAAGCACAACTT+GGG | - | chr3.2:69839215-69839234 | MS.gene25868:CDS | 30.0% | |
| TGAGAGAAAAATGTGTTGAA+TGG | - | chr3.2:69839328-69839347 | MS.gene25868:CDS | 30.0% | |
| TTAGATGAAGTTAAGGATAG+AGG | - | chr3.2:69839036-69839055 | MS.gene25868:CDS | 30.0% | |
| TTGTTACCTAGAAATTGAAG+TGG | + | chr3.2:69838763-69838782 | None:intergenic | 30.0% | |
| TTTGTTGGAAGATTCAGAAT+AGG | + | chr3.2:69837562-69837581 | None:intergenic | 30.0% | |
| ! | AGGTAACAATTTTCCTGAAA+AGG | - | chr3.2:69838774-69838793 | MS.gene25868:intron | 30.0% |
| ! | ATTCGGATATTTTTCATTCC+TGG | + | chr3.2:69838559-69838578 | None:intergenic | 30.0% |
| ! | CTTGGACATGACTTTTTAAA+GGG | - | chr3.2:69836802-69836821 | MS.gene25868:CDS | 30.0% |
| ! | TCTTGGACATGACTTTTTAA+AGG | - | chr3.2:69836801-69836820 | MS.gene25868:CDS | 30.0% |
| ! | TTCGGATATTTTTCATTCCT+GGG | + | chr3.2:69838558-69838577 | None:intergenic | 30.0% |
| ! | TTGAATCCATTTTCCTTTTC+AGG | + | chr3.2:69838790-69838809 | None:intergenic | 30.0% |
| !! | TATTTTTGACTCATTGTGGT+TGG | - | chr3.2:69839115-69839134 | MS.gene25868:CDS | 30.0% |
| !!! | GAAATCAGTTTTGTTGGTTT+TGG | - | chr3.2:69838619-69838638 | MS.gene25868:intron | 30.0% |
| AAATGATCAAGGGTGAAAAG+GGG | - | chr3.2:69839298-69839317 | MS.gene25868:CDS | 35.0% | |
| AATGGTACACAAACTACATG+AGG | + | chr3.2:69836667-69836686 | None:intergenic | 35.0% | |
| ACTTGTGAAGGAAATGATCA+AGG | - | chr3.2:69839287-69839306 | MS.gene25868:CDS | 35.0% | |
| AGGTATATAAGCACAACTTG+GGG | - | chr3.2:69839216-69839235 | MS.gene25868:CDS | 35.0% | |
| ATTGGTCCACTTCAATTTCT+AGG | - | chr3.2:69838754-69838773 | MS.gene25868:intron | 35.0% | |
| CATTGTTCACAAAGGTTATG+TGG | + | chr3.2:69836753-69836772 | None:intergenic | 35.0% | |
| CTGAGCAACAAACAAATTGT+AGG | - | chr3.2:69839196-69839215 | MS.gene25868:CDS | 35.0% | |
| CTTGTGAAGGAAATGATCAA+GGG | - | chr3.2:69839288-69839307 | MS.gene25868:CDS | 35.0% | |
| GAAAATGCTACACAAAGCAT+TGG | - | chr3.2:69836877-69836896 | MS.gene25868:intron | 35.0% | |
| GAAATGATCAAGGGTGAAAA+GGG | - | chr3.2:69839297-69839316 | MS.gene25868:CDS | 35.0% | |
| GGACCAATGTTGTATATGTT+GGG | + | chr3.2:69838742-69838761 | None:intergenic | 35.0% | |
| GGCCTATTTATCCACAAAAA+TGG | + | chr3.2:69838973-69838992 | None:intergenic | 35.0% | |
| GGTCGAATCTCAGATTATTA+GGG | - | chr3.2:69838045-69838064 | MS.gene25868:intron | 35.0% | |
| GGTTGTAGGAAACATTGTTA+TGG | - | chr3.2:69836913-69836932 | MS.gene25868:intron | 35.0% | |
| GTAGATGTTGCAAAGGATTT+GGG | - | chr3.2:69837027-69837046 | MS.gene25868:intron | 35.0% | |
| GTAGGTATATAAGCACAACT+TGG | - | chr3.2:69839214-69839233 | MS.gene25868:CDS | 35.0% | |
| TCTTCGTAGTTATATGTGCT+TGG | - | chr3.2:69837703-69837722 | MS.gene25868:intron | 35.0% | |
| TGAAGTTCTTGATGCTCTTA+TGG | - | chr3.2:69838708-69838727 | MS.gene25868:intron | 35.0% | |
| TGAATTCAACCACAAACGTT+TGG | - | chr3.2:69836771-69836790 | MS.gene25868:CDS | 35.0% | |
| TGGACCAATGTTGTATATGT+TGG | + | chr3.2:69838743-69838762 | None:intergenic | 35.0% | |
| TGGTCGAATCTCAGATTATT+AGG | - | chr3.2:69838044-69838063 | MS.gene25868:intron | 35.0% | |
| TGTAGATGTTGCAAAGGATT+TGG | - | chr3.2:69837026-69837045 | MS.gene25868:intron | 35.0% | |
| TTATATTACTGATGGCTCCT+TGG | - | chr3.2:69838513-69838532 | MS.gene25868:intron | 35.0% | |
| TTGTTCTAACAAAGCTTGGA+AGG | + | chr3.2:69838588-69838607 | None:intergenic | 35.0% | |
| ! | AAATAGGCCAGATTTGGTAA+GGG | - | chr3.2:69838984-69839003 | MS.gene25868:CDS | 35.0% |
| ! | GAAAATGGATTCAAATCCGA+TGG | - | chr3.2:69838796-69838815 | MS.gene25868:intron | 35.0% |
| ! | GAGATTTTACCAAACGTTTG+TGG | + | chr3.2:69836783-69836802 | None:intergenic | 35.0% |
| ! | TAAAGGGTCAACCAGATTTT+AGG | - | chr3.2:69836818-69836837 | MS.gene25868:CDS | 35.0% |
| ! | TAAATAGGCCAGATTTGGTA+AGG | - | chr3.2:69838983-69839002 | MS.gene25868:CDS | 35.0% |
| ! | TCGGATATTTTTCATTCCTG+GGG | + | chr3.2:69838557-69838576 | None:intergenic | 35.0% |
| ! | TGTGTAGCATTTTCATCTGA+TGG | + | chr3.2:69836871-69836890 | None:intergenic | 35.0% |
| !! | AAAAGTGTTGGTGTAACTGA+TGG | - | chr3.2:69838147-69838166 | MS.gene25868:intron | 35.0% |
| !! | ATTTGCTGTAGATGTTGCAA+AGG | - | chr3.2:69837020-69837039 | MS.gene25868:intron | 35.0% |
| !! | TCACTTGAGAGTATTTCTGA+AGG | - | chr3.2:69839144-69839163 | MS.gene25868:CDS | 35.0% |
| !! | TGTGGAAACCAAGTTTGTTA+AGG | + | chr3.2:69836735-69836754 | None:intergenic | 35.0% |
| AAGAAAGGCCAACCAATCAT+AGG | + | chr3.2:69839174-69839193 | None:intergenic | 40.0% | |
| AAGGTAAGCCTATGATTGGT+TGG | - | chr3.2:69839163-69839182 | MS.gene25868:CDS | 40.0% | |
| AGAGGTAACTGAACTTGTGA+AGG | - | chr3.2:69839275-69839294 | MS.gene25868:CDS | 40.0% | |
| ATAAGCACAACTTGGGGAAT+AGG | - | chr3.2:69839222-69839241 | MS.gene25868:CDS | 40.0% | |
| GGAAATGATCAAGGGTGAAA+AGG | - | chr3.2:69839296-69839315 | MS.gene25868:CDS | 40.0% | |
| GGATGATGTGAAAAGAGAAG+AGG | - | chr3.2:69839257-69839276 | MS.gene25868:CDS | 40.0% | |
| GGGAATAGGGATGGATATTA+AGG | - | chr3.2:69839236-69839255 | MS.gene25868:CDS | 40.0% | |
| GTCAAAAATACCCCAACTGA+TGG | + | chr3.2:69839105-69839124 | None:intergenic | 40.0% | |
| GTGGATAAATAGGCCAGATT+TGG | - | chr3.2:69838978-69838997 | MS.gene25868:CDS | 40.0% | |
| GTGGTTGTTCTAACAAAGCT+TGG | + | chr3.2:69838592-69838611 | None:intergenic | 40.0% | |
| TAAGCACAACTTGGGGAATA+GGG | - | chr3.2:69839223-69839242 | MS.gene25868:CDS | 40.0% | |
| TACTTGCACATCCATCAGTT+GGG | - | chr3.2:69839091-69839110 | MS.gene25868:CDS | 40.0% | |
| TCATTGTAAGAAGAACCTCC+TGG | + | chr3.2:69839381-69839400 | None:intergenic | 40.0% | |
| TCTGAAGGTAAGCCTATGAT+TGG | - | chr3.2:69839159-69839178 | MS.gene25868:CDS | 40.0% | |
| TCTTACCCTCCAGATTCTAA+GGG | + | chr3.2:69838078-69838097 | None:intergenic | 40.0% | |
| TTCTCCACAAGCTCTTTCAA+TGG | + | chr3.2:69836940-69836959 | None:intergenic | 40.0% | |
| TTCTTACCCTCCAGATTCTA+AGG | + | chr3.2:69838079-69838098 | None:intergenic | 40.0% | |
| TTTCCAAAGACTTGCACCAT+CGG | + | chr3.2:69838815-69838834 | None:intergenic | 40.0% | |
| ! | AATAGGCCAGATTTGGTAAG+GGG | - | chr3.2:69838985-69839004 | MS.gene25868:CDS | 40.0% |
| ! | AGGTTTGAGACTATACCAGA+TGG | - | chr3.2:69836838-69836857 | MS.gene25868:CDS | 40.0% |
| ! | GATTTTCCCCTTACCAAATC+TGG | + | chr3.2:69838994-69839013 | None:intergenic | 40.0% |
| ! | GCATTGCAGAGCAACAATTT+TGG | - | chr3.2:69837049-69837068 | MS.gene25868:intron | 40.0% |
| ! | GTAGCATTTTCATCTGATGG+TGG | + | chr3.2:69836868-69836887 | None:intergenic | 40.0% |
| ! | GTTTGTTGCTCAGCAAAGAA+AGG | + | chr3.2:69839189-69839208 | None:intergenic | 40.0% |
| !! | AATGCTACACAAAGCATTGG+TGG | - | chr3.2:69836880-69836899 | MS.gene25868:intron | 40.0% |
| !! | GGGGTATTTTTGACTCATTG+TGG | - | chr3.2:69839111-69839130 | MS.gene25868:CDS | 40.0% |
| !!! | CAGTTTTGTTGGTTTTGGCT+TGG | - | chr3.2:69838624-69838643 | MS.gene25868:intron | 40.0% |
| AATCCGATGGTGCAAGTCTT+TGG | - | chr3.2:69838809-69838828 | MS.gene25868:intron | 45.0% | |
| ACTTGCACATCCATCAGTTG+GGG | - | chr3.2:69839092-69839111 | MS.gene25868:CDS | 45.0% | |
| AGCTTGGAAGGTCTCTCATT+CGG | + | chr3.2:69838576-69838595 | None:intergenic | 45.0% | |
| CAACACGATGACTTCACAAG+AGG | + | chr3.2:69837756-69837775 | None:intergenic | 45.0% | |
| CCATTCTAGATGGACATCCA+AGG | + | chr3.2:69838533-69838552 | None:intergenic | 45.0% | |
| CCTTGGATGTCCATCTAGAA+TGG | - | chr3.2:69838530-69838549 | MS.gene25868:intron | 45.0% | |
| CTCTTCCCTTAGAATCTGGA+GGG | - | chr3.2:69838070-69838089 | MS.gene25868:intron | 45.0% | |
| GTACTTGCACATCCATCAGT+TGG | - | chr3.2:69839090-69839109 | MS.gene25868:CDS | 45.0% | |
| GTAGTAGAAGCTGCTAAACC+AGG | - | chr3.2:69839360-69839379 | MS.gene25868:CDS | 45.0% | |
| TCACTGAAGAAGGTTCCCAT+TGG | + | chr3.2:69838867-69838886 | None:intergenic | 45.0% | |
| TGGTCCATTGAAAGAGCTTG+TGG | - | chr3.2:69836933-69836952 | MS.gene25868:intron | 45.0% | |
| TGTGTACCATTTCCAGCACA+AGG | - | chr3.2:69836676-69836695 | MS.gene25868:CDS | 45.0% | |
| ! | CTGATGGATGTGCAAGTACT+TGG | + | chr3.2:69839089-69839108 | None:intergenic | 45.0% |
| !! | AGCATTGGTGGACTTGTTGA+AGG | - | chr3.2:69836892-69836911 | MS.gene25868:intron | 45.0% |
| !! | GTGGACTTGTTGAAGGTTGT+AGG | - | chr3.2:69836899-69836918 | MS.gene25868:intron | 45.0% |
| !! | TGTGCAAGTACTTGGCTTTG+AGG | + | chr3.2:69839081-69839100 | None:intergenic | 45.0% |
| !! | GTTTAAATTTATTTATTATT+CGG | - | chr3.2:69837825-69837844 | MS.gene25868:intron | 5.0% |
| !! | TTTAAATTTATTTATTATTC+GGG | - | chr3.2:69837826-69837845 | MS.gene25868:intron | 5.0% |
| !!! | ATTTTTATTATCATTATTTA+TGG | + | chr3.2:69837603-69837622 | None:intergenic | 5.0% |
| ACGTGACCTTGTGCTGGAAA+TGG | + | chr3.2:69836685-69836704 | None:intergenic | 50.0% | |
| CACAACTTGGGGAATAGGGA+TGG | - | chr3.2:69839227-69839246 | MS.gene25868:CDS | 50.0% | |
| CCTCTTCCCTTAGAATCTGG+AGG | - | chr3.2:69838069-69838088 | MS.gene25868:intron | 50.0% | |
| GGTCCTCTTCCCTTAGAATC+TGG | - | chr3.2:69838066-69838085 | MS.gene25868:intron | 50.0% | |
| GTAGAAGCTGCTAAACCAGG+AGG | - | chr3.2:69839363-69839382 | MS.gene25868:CDS | 50.0% | |
| TTCCTGGGGTCCATTCTAGA+TGG | + | chr3.2:69838543-69838562 | None:intergenic | 50.0% | |
| TTTGGACTGCCTCTGCTTGT+GGG | - | chr3.2:69837067-69837086 | MS.gene25868:intron | 50.0% | |
| ! | CCTCCAGATTCTAAGGGAAG+AGG | + | chr3.2:69838072-69838091 | None:intergenic | 50.0% |
| ! | TTTTGGACTGCCTCTGCTTG+TGG | - | chr3.2:69837066-69837085 | MS.gene25868:intron | 50.0% |
| !! | TCTGATGGTGGCAAACCATC+TGG | + | chr3.2:69836856-69836875 | None:intergenic | 50.0% |
| GGGTTTACGTGACCTTGTGC+TGG | + | chr3.2:69836691-69836710 | None:intergenic | 55.0% | |
| TCCCATCAACCCACAAGCAG+AGG | + | chr3.2:69837079-69837098 | None:intergenic | 55.0% | |
| ! | GTCCATCTAGAATGGACCCC+AGG | - | chr3.2:69838538-69838557 | MS.gene25868:intron | 55.0% |
| ! | TGCCTCTGCTTGTGGGTTGA+TGG | - | chr3.2:69837074-69837093 | MS.gene25868:intron | 55.0% |
| !! | GCCTCTGCTTGTGGGTTGAT+GGG | - | chr3.2:69837075-69837094 | MS.gene25868:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69836631 | 69839449 | 69836631 | ID=MS.gene25868 |
| chr3.2 | mRNA | 69836631 | 69839449 | 69836631 | ID=MS.gene25868.t1;Parent=MS.gene25868 |
| chr3.2 | exon | 69838933 | 69839449 | 69838933 | ID=MS.gene25868.t1.exon1;Parent=MS.gene25868.t1 |
| chr3.2 | CDS | 69838933 | 69839449 | 69838933 | ID=cds.MS.gene25868.t1;Parent=MS.gene25868.t1 |
| chr3.2 | exon | 69837305 | 69837574 | 69837305 | ID=MS.gene25868.t1.exon2;Parent=MS.gene25868.t1 |
| chr3.2 | CDS | 69837305 | 69837574 | 69837305 | ID=cds.MS.gene25868.t1;Parent=MS.gene25868.t1 |
| chr3.2 | exon | 69837130 | 69837217 | 69837130 | ID=MS.gene25868.t1.exon3;Parent=MS.gene25868.t1 |
| chr3.2 | CDS | 69837130 | 69837217 | 69837130 | ID=cds.MS.gene25868.t1;Parent=MS.gene25868.t1 |
| chr3.2 | exon | 69836631 | 69836862 | 69836631 | ID=MS.gene25868.t1.exon4;Parent=MS.gene25868.t1 |
| chr3.2 | CDS | 69836631 | 69836862 | 69836631 | ID=cds.MS.gene25868.t1;Parent=MS.gene25868.t1 |
| Gene Sequence |
| Protein sequence |
