Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46313.t1 | XP_013449828.1 | 93.5 | 308 | 20 | 0 | 8 | 315 | 196 | 503 | 9.30E-174 | 619.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46313.t1 | Q3EBR6 | 54.6 | 306 | 132 | 4 | 8 | 309 | 223 | 525 | 6.0e-97 | 355.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46313.t1 | A0A072U3F4 | 93.5 | 308 | 20 | 0 | 8 | 315 | 196 | 503 | 6.7e-174 | 619.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene46313 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene46313 | 0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene46313 | 0.816903 | 4.35E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene46313 | 0.818797 | 1.62E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene46313 | 0.805233 | 1.47E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene46313 | 0.823182 | 1.59E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene46313 | 0.814495 | 1.50E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene46313 | -0.822346 | 2.49E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene46313 | 0.810942 | 8.97E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene46313 | 0.854332 | 1.32E-61 | -1.69E-46 |
| MS.gene050971 | MS.gene46313 | 0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene46313 | 0.820829 | 5.58E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene46313 | 0.814673 | 1.37E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene46313 | 0.821472 | 3.97E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene46313 | 0.85869 | 6.93E-63 | -1.69E-46 |
| MS.gene051582 | MS.gene46313 | 0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene46313 | 0.827278 | 1.71E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene46313 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene46313 | -0.874085 | 8.90E-68 | -1.69E-46 |
| MS.gene052077 | MS.gene46313 | 0.812366 | 4.40E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene46313 | 0.854433 | 1.24E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene46313 | 0.872747 | 2.51E-67 | -1.69E-46 |
| MS.gene052255 | MS.gene46313 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene46313 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene46313 | 0.804577 | 2.02E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene46313 | 0.838486 | 2.80E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene46313 | 0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene46313 | 0.84011 | 1.06E-57 | -1.69E-46 |
| MS.gene052711 | MS.gene46313 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene46313 | 0.872003 | 4.44E-67 | -1.69E-46 |
| MS.gene053209 | MS.gene46313 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene46313 | 0.84106 | 5.97E-58 | -1.69E-46 |
| MS.gene053928 | MS.gene46313 | 0.837759 | 4.30E-57 | -1.69E-46 |
| MS.gene054010 | MS.gene46313 | 0.807766 | 4.31E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene46313 | 0.801435 | 9.01E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene46313 | 0.822082 | 2.86E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene46313 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene46313 | 0.813584 | 2.38E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene46313 | 0.896285 | 4.27E-76 | -1.69E-46 |
| MS.gene054719 | MS.gene46313 | 0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene46313 | 0.832694 | 8.17E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene46313 | 0.825382 | 4.83E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene46313 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene46313 | 0.824517 | 7.73E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene46313 | 0.839076 | 1.97E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene46313 | 0.829061 | 6.36E-55 | -1.69E-46 |
| MS.gene055666 | MS.gene46313 | 0.81404 | 1.89E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene46313 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene46313 | 0.811127 | 8.18E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene46313 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene46313 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene46313 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene46313 | 0.858561 | 7.57E-63 | -1.69E-46 |
| MS.gene056514 | MS.gene46313 | 0.804187 | 2.44E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene46313 | 0.862165 | 6.15E-64 | -1.69E-46 |
| MS.gene056723 | MS.gene46313 | 0.842343 | 2.74E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene46313 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene46313 | 0.824632 | 7.27E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene46313 | 0.800707 | 1.27E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene46313 | 0.803817 | 2.91E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene46313 | 0.817917 | 2.57E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene46313 | 0.814811 | 1.27E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene46313 | 0.812687 | 3.74E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene46313 | 0.814601 | 1.42E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene46313 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene46313 | 0.827483 | 1.53E-54 | -1.69E-46 |
| MS.gene057476 | MS.gene46313 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene46313 | 0.862777 | 3.99E-64 | -1.69E-46 |
| MS.gene057823 | MS.gene46313 | 0.865747 | 4.72E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene46313 | 0.808454 | 3.07E-50 | -1.69E-46 |
| MS.gene057826 | MS.gene46313 | 0.805549 | 1.27E-49 | -1.69E-46 |
| MS.gene057888 | MS.gene46313 | 0.801695 | 7.98E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene46313 | 0.846892 | 1.63E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene46313 | 0.840083 | 1.08E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene46313 | 0.815587 | 8.56E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene46313 | 0.809461 | 1.87E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene46313 | 0.809445 | 1.89E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene46313 | 0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene46313 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene46313 | 0.845299 | 4.43E-59 | -1.69E-46 |
| MS.gene058710 | MS.gene46313 | 0.862324 | 5.49E-64 | -1.69E-46 |
| MS.gene05886 | MS.gene46313 | 0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene46313 | 0.808835 | 2.55E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene46313 | 0.855006 | 8.43E-62 | -1.69E-46 |
| MS.gene058949 | MS.gene46313 | 0.85571 | 5.26E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene46313 | 0.853437 | 2.39E-61 | -1.69E-46 |
| MS.gene059082 | MS.gene46313 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene46313 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene46313 | 0.806812 | 6.86E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene46313 | 0.870824 | 1.09E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene46313 | 0.825373 | 4.86E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene46313 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene46313 | 0.833814 | 4.29E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene46313 | 0.828881 | 7.02E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene46313 | 0.833913 | 4.06E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene46313 | 0.850565 | 1.56E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene46313 | 0.81873 | 1.68E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene46313 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene46313 | 0.84445 | 7.50E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene46313 | 0.818483 | 1.91E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene46313 | 0.859883 | 3.04E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene46313 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene061214 | MS.gene46313 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene061215 | MS.gene46313 | 0.802969 | 4.36E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031785 | MS.gene46313 | PPI |
| MS.gene46313 | MS.gene006510 | PPI |
| MS.gene46313 | MS.gene052346 | PPI |
| MS.gene28990 | MS.gene46313 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46313.t1 | MTR_7g096120 | 93.506 | 308 | 20 | 0 | 8 | 315 | 196 | 503 | 0.0 | 612 |
| MS.gene46313.t1 | MTR_7g096140 | 96.958 | 263 | 8 | 0 | 8 | 270 | 196 | 458 | 0.0 | 541 |
| MS.gene46313.t1 | MTR_1995s0010 | 97.309 | 223 | 6 | 0 | 9 | 231 | 1 | 223 | 4.52e-165 | 458 |
| MS.gene46313.t1 | MTR_4g077070 | 51.475 | 305 | 135 | 7 | 8 | 307 | 221 | 517 | 3.90e-109 | 327 |
| MS.gene46313.t1 | MTR_4g087810 | 39.661 | 295 | 145 | 6 | 8 | 300 | 139 | 402 | 5.57e-62 | 202 |
| MS.gene46313.t1 | MTR_4g087830 | 38.644 | 295 | 148 | 6 | 8 | 300 | 130 | 393 | 1.16e-60 | 199 |
| MS.gene46313.t1 | MTR_2g015690 | 39.929 | 283 | 145 | 4 | 8 | 286 | 145 | 406 | 4.25e-59 | 195 |
| MS.gene46313.t1 | MTR_7g006400 | 44.783 | 230 | 107 | 8 | 8 | 230 | 215 | 431 | 2.82e-53 | 182 |
| MS.gene46313.t1 | MTR_5g013230 | 40.392 | 255 | 128 | 7 | 8 | 249 | 252 | 495 | 8.28e-51 | 176 |
| MS.gene46313.t1 | MTR_4g080100 | 33.770 | 305 | 152 | 5 | 8 | 287 | 151 | 430 | 1.75e-49 | 171 |
| MS.gene46313.t1 | MTR_4g099510 | 41.767 | 249 | 124 | 6 | 8 | 249 | 246 | 480 | 3.14e-47 | 166 |
| MS.gene46313.t1 | MTR_7g081645 | 39.516 | 248 | 118 | 8 | 8 | 246 | 195 | 419 | 1.88e-45 | 159 |
| MS.gene46313.t1 | MTR_7g081620 | 36.397 | 272 | 134 | 9 | 8 | 250 | 189 | 450 | 2.45e-43 | 154 |
| MS.gene46313.t1 | MTR_2g020020 | 32.530 | 166 | 84 | 8 | 10 | 171 | 98 | 239 | 1.51e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46313.t1 | AT2G30550 | 54.575 | 306 | 132 | 4 | 8 | 309 | 223 | 525 | 4.48e-118 | 350 |
| MS.gene46313.t1 | AT1G06800 | 54.605 | 304 | 131 | 4 | 8 | 307 | 208 | 508 | 1.60e-116 | 346 |
| MS.gene46313.t1 | AT1G51440 | 53.548 | 310 | 128 | 7 | 8 | 307 | 210 | 513 | 7.48e-104 | 314 |
| MS.gene46313.t1 | AT2G30550 | 57.391 | 230 | 91 | 4 | 8 | 233 | 223 | 449 | 6.14e-91 | 279 |
| MS.gene46313.t1 | AT1G06800 | 56.769 | 229 | 92 | 4 | 8 | 232 | 208 | 433 | 1.11e-88 | 272 |
| MS.gene46313.t1 | AT1G30370 | 42.049 | 283 | 148 | 6 | 8 | 285 | 235 | 506 | 3.63e-65 | 214 |
| MS.gene46313.t1 | AT1G05800 | 46.256 | 227 | 108 | 5 | 8 | 231 | 195 | 410 | 1.68e-59 | 197 |
| MS.gene46313.t1 | AT1G06250 | 36.268 | 284 | 155 | 3 | 8 | 286 | 16 | 278 | 5.11e-57 | 186 |
| MS.gene46313.t1 | AT2G31690 | 45.957 | 235 | 113 | 6 | 8 | 239 | 206 | 429 | 2.14e-56 | 190 |
| MS.gene46313.t1 | AT1G06250 | 36.268 | 284 | 155 | 3 | 8 | 286 | 130 | 392 | 1.34e-55 | 186 |
| MS.gene46313.t1 | AT4G18550 | 35.689 | 283 | 157 | 3 | 8 | 286 | 145 | 406 | 9.97e-52 | 176 |
| MS.gene46313.t1 | AT4G18550 | 35.689 | 283 | 157 | 3 | 8 | 286 | 162 | 423 | 1.19e-51 | 176 |
| MS.gene46313.t1 | AT2G42690 | 34.106 | 302 | 151 | 5 | 8 | 287 | 127 | 402 | 2.86e-50 | 172 |
| MS.gene46313.t1 | AT4G16820 | 43.478 | 253 | 119 | 7 | 8 | 248 | 238 | 478 | 8.82e-50 | 173 |
| MS.gene46313.t1 | AT2G44810 | 36.863 | 255 | 128 | 7 | 8 | 246 | 116 | 353 | 8.69e-45 | 156 |
| MS.gene46313.t1 | AT2G44810 | 36.471 | 255 | 129 | 7 | 8 | 246 | 206 | 443 | 6.10e-44 | 156 |
| MS.gene46313.t1 | AT4G18550 | 38.411 | 151 | 91 | 1 | 8 | 156 | 162 | 312 | 1.29e-27 | 110 |
| MS.gene46313.t1 | AT5G18640 | 32.727 | 165 | 82 | 9 | 12 | 171 | 100 | 240 | 1.46e-11 | 64.3 |
| MS.gene46313.t1 | AT5G18640 | 32.727 | 165 | 82 | 9 | 12 | 171 | 100 | 240 | 2.77e-11 | 63.9 |
| MS.gene46313.t1 | AT5G18640 | 32.727 | 165 | 82 | 9 | 12 | 171 | 100 | 240 | 2.77e-11 | 63.9 |
| MS.gene46313.t1 | AT5G18640 | 32.727 | 165 | 82 | 9 | 12 | 171 | 112 | 252 | 3.55e-11 | 63.9 |
| MS.gene46313.t1 | AT5G18640 | 32.727 | 165 | 82 | 9 | 12 | 171 | 112 | 252 | 3.55e-11 | 63.9 |
Find 74 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGATTGGAGAAACATTT+AGG | 0.169595 | 7.3:-15210627 | MS.gene46313:CDS |
| CAAGGAATGTCTTGGTAAAT+AGG | 0.211928 | 7.3:+15210957 | None:intergenic |
| CGGTTAAATGTTAGGGAAAA+TGG | 0.236210 | 7.3:-15210714 | MS.gene46313:CDS |
| TTCAAATCTTGCCTCCAATT+TGG | 0.241101 | 7.3:+15208178 | None:intergenic |
| GGACATTGCTTTGGTGAATA+AGG | 0.258869 | 7.3:-15208236 | MS.gene46313:CDS |
| GTTGGGAACGTGAAATTTAA+AGG | 0.276041 | 7.3:-15210648 | MS.gene46313:CDS |
| ACGTTAACGGGACATAGTTT+AGG | 0.282591 | 7.3:-15210780 | MS.gene46313:CDS |
| GATATGAAGCGACAACTAAA+AGG | 0.286172 | 7.3:-15208258 | MS.gene46313:CDS |
| CGTTAACGGGACATAGTTTA+GGG | 0.299251 | 7.3:-15210779 | MS.gene46313:CDS |
| CAGAAACACGGTTAAATGTT+AGG | 0.300124 | 7.3:-15210722 | MS.gene46313:CDS |
| ATGAAGAGATGAGTCCTATC+TGG | 0.311376 | 7.3:+15208059 | None:intergenic |
| GGAGATTGGAGAAACATTTA+GGG | 0.327887 | 7.3:-15210626 | MS.gene46313:CDS |
| GTAATACTAACTTCTTCATT+AGG | 0.342805 | 7.3:+15210801 | None:intergenic |
| CGTGAAATTTAAAGGGAGAT+TGG | 0.344597 | 7.3:-15210640 | MS.gene46313:CDS |
| GCAAGATTTGAATAGGAATA+TGG | 0.354087 | 7.3:-15208167 | MS.gene46313:CDS |
| AGCACTCTGTGCCACCAAAT+TGG | 0.358258 | 7.3:-15208192 | MS.gene46313:CDS |
| GAAGTTAGTATTACGTTAAC+GGG | 0.360874 | 7.3:-15210792 | MS.gene46313:CDS |
| ATTGGAGGCAAGATTTGAAT+AGG | 0.374370 | 7.3:-15208174 | MS.gene46313:CDS |
| TCCCTAACGATGTTTATGTT+TGG | 0.379340 | 7.3:-15211068 | None:intergenic |
| GCACATGCAGCATCAGCATT+AGG | 0.397000 | 7.3:+15210423 | None:intergenic |
| ATAAGAAACCCTGGTGACTT+TGG | 0.419814 | 7.3:+15210564 | None:intergenic |
| AACTAAAAGGGACATTGCTT+TGG | 0.433662 | 7.3:-15208245 | MS.gene46313:CDS |
| GGTTCATAATAAGCATGATA+TGG | 0.439973 | 7.3:-15210589 | MS.gene46313:CDS |
| TGCTGCATGTGCTCATAACT+TGG | 0.440073 | 7.3:-15210412 | MS.gene46313:CDS |
| AGAAACACGGTTAAATGTTA+GGG | 0.446331 | 7.3:-15210721 | MS.gene46313:CDS |
| ATGTTTATGTTTGGAACTAC+AGG | 0.449711 | 7.3:-15211059 | MS.gene46313:CDS |
| AGAAGTTAGTATTACGTTAA+CGG | 0.458390 | 7.3:-15210793 | MS.gene46313:CDS |
| TTGGGAACGTGAAATTTAAA+GGG | 0.459427 | 7.3:-15210647 | MS.gene46313:CDS |
| GAGCCTTATCTCTCCCAGAT+AGG | 0.471370 | 7.3:-15208073 | MS.gene46313:CDS |
| TCTACTCGAACATCGTTGTC+TGG | 0.471524 | 7.3:+15210933 | None:intergenic |
| CATATCCACGGTTGCTCCCA+TGG | 0.475119 | 7.3:+15208275 | None:intergenic |
| CGAAGATGGACGTTGGGTGC+TGG | 0.476306 | 7.3:-15208137 | MS.gene46313:CDS |
| CAGCACCCAACGTCCATCTT+CGG | 0.497295 | 7.3:+15208138 | None:intergenic |
| AAATCTTGCCTCCAATTTGG+TGG | 0.500957 | 7.3:+15208181 | None:intergenic |
| TACTGTGACTCATGTTGAAT+GGG | 0.514995 | 7.3:-15211006 | MS.gene46313:CDS |
| GTAGAGACGTCGTCGTTGCT+TGG | 0.515529 | 7.3:-15211034 | MS.gene46313:CDS |
| GATATGGTGCCAAAGTCACC+AGG | 0.523665 | 7.3:-15210573 | MS.gene46313:CDS |
| TGTTGGAGTTGAGTTAGAGT+TGG | 0.525724 | 7.3:-15210472 | MS.gene46313:CDS |
| AATATGGTGAAGACCGAAGA+TGG | 0.533831 | 7.3:-15208151 | MS.gene46313:CDS |
| AACGATGTTCGAGTAGAAGC+AGG | 0.537151 | 7.3:-15210927 | MS.gene46313:CDS |
| GATGAGTATCTGCAAGTTGT+GGG | 0.543513 | 7.3:+15208107 | None:intergenic |
| TAGTTGTCGCTTCATATCCA+CGG | 0.544561 | 7.3:+15208263 | None:intergenic |
| CTGAGGATATTGATATTCCA+TGG | 0.547347 | 7.3:-15210506 | MS.gene46313:CDS |
| AATTTCACGTTCCCAACCCT+AGG | 0.553515 | 7.3:+15210654 | None:intergenic |
| TGCATGTGCTCATAACTTGG+AGG | 0.557550 | 7.3:-15210409 | MS.gene46313:CDS |
| TGATGATGAGCAGGTACCAT+GGG | 0.560215 | 7.3:-15208291 | MS.gene46313:intron |
| AGTCCTATCTGGGAGAGATA+AGG | 0.560550 | 7.3:+15208070 | None:intergenic |
| ACTCTGTGCCACCAAATTGG+AGG | 0.560687 | 7.3:-15208189 | MS.gene46313:CDS |
| ATATGAAGCGACAACTAAAA+GGG | 0.562797 | 7.3:-15208257 | MS.gene46313:CDS |
| ACCCATCGAGTATGTGCAAG+TGG | 0.565551 | 7.3:+15210385 | None:intergenic |
| GCCCACTTGCACATACTCGA+TGG | 0.566632 | 7.3:-15210387 | MS.gene46313:CDS |
| CGAACATCGTTGTCTGGACA+AGG | 0.568633 | 7.3:+15210939 | None:intergenic |
| CCATGGTGTTACACTCATGT+TGG | 0.572004 | 7.3:-15210489 | MS.gene46313:CDS |
| GAAGACCGAAGATGGACGTT+GGG | 0.573919 | 7.3:-15208143 | MS.gene46313:CDS |
| GTACTGTGACTCATGTTGAA+TGG | 0.574716 | 7.3:-15211007 | MS.gene46313:CDS |
| TTCTCATTAATAAGAAACCC+TGG | 0.577571 | 7.3:+15210555 | None:intergenic |
| TGAAGAGATGAGTCCTATCT+GGG | 0.580441 | 7.3:+15208060 | None:intergenic |
| TGATGAGTATCTGCAAGTTG+TGG | 0.587655 | 7.3:+15208106 | None:intergenic |
| ACCGATAGACAAACAAAAGA+CGG | 0.593031 | 7.3:-15210888 | MS.gene46313:CDS |
| GACGTCGTCGTTGCTTGGCG+AGG | 0.598300 | 7.3:-15211029 | MS.gene46313:CDS |
| GTGGTTATTAAAGTTTGCTG+AGG | 0.600416 | 7.3:-15210523 | MS.gene46313:CDS |
| ACATAGTTTAGGGAGTGCTA+TGG | 0.614629 | 7.3:-15210769 | MS.gene46313:CDS |
| CCCACTTGCACATACTCGAT+GGG | 0.620876 | 7.3:-15210386 | MS.gene46313:intron |
| TTGATGATGAGCAGGTACCA+TGG | 0.623853 | 7.3:-15208292 | MS.gene46313:intron |
| TGTCTGGACAAGGAATGTCT+TGG | 0.642553 | 7.3:+15210949 | None:intergenic |
| CGTTTGATATAGCAGAAACA+CGG | 0.643367 | 7.3:-15210734 | MS.gene46313:CDS |
| AGGTACCATGGGAGCAACCG+TGG | 0.651704 | 7.3:-15208280 | MS.gene46313:CDS |
| GAGATTGGAGAAACATTTAG+GGG | 0.658549 | 7.3:-15210625 | MS.gene46313:CDS |
| CCCATCGAGTATGTGCAAGT+GGG | 0.660658 | 7.3:+15210386 | None:intergenic |
| TTAATGAGAAATCGCCTGAG+TGG | 0.664008 | 7.3:-15210542 | MS.gene46313:CDS |
| GCAAACTTTAATAACCACTC+AGG | 0.666053 | 7.3:+15210528 | None:intergenic |
| CCAACATGAGTGTAACACCA+TGG | 0.679476 | 7.3:+15210489 | None:intergenic |
| TGAAGACCGAAGATGGACGT+TGG | 0.699979 | 7.3:-15208144 | MS.gene46313:CDS |
| ATATGGTGCCAAAGTCACCA+GGG | 0.760395 | 7.3:-15210572 | MS.gene46313:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAGATTAAATAAAATAT+AGG | + | chr7.3:15209804-15209823 | None:intergenic | 10.0% |
| !! | GTATTAAAAAACTATAAAAT+AGG | - | chr7.3:15210490-15210509 | MS.gene46313:CDS | 10.0% |
| !! | AAAATATACCTTATATTCAT+AGG | + | chr7.3:15209475-15209494 | None:intergenic | 15.0% |
| !! | AAATAAAAAAATATTAAGGG+AGG | - | chr7.3:15209009-15209028 | MS.gene46313:intron | 15.0% |
| !! | AGTATATTACAGTAATTAAT+TGG | + | chr7.3:15209055-15209074 | None:intergenic | 15.0% |
| !! | ATTAGATACTTATTAGATAT+TGG | - | chr7.3:15210468-15210487 | MS.gene46313:CDS | 15.0% |
| !! | ATTTCAGTTTATTAAATAAC+TGG | + | chr7.3:15209879-15209898 | None:intergenic | 15.0% |
| !! | CTCATGAAAATTTATTAAAT+AGG | + | chr7.3:15210432-15210451 | None:intergenic | 15.0% |
| !!! | AATAACAATTTTGACAATAT+AGG | + | chr7.3:15209551-15209570 | None:intergenic | 15.0% |
| !!! | AGATAACGATAAATTTTTTT+AGG | + | chr7.3:15209612-15209631 | None:intergenic | 15.0% |
| !!! | ATAACAATTTTGACAATATA+GGG | + | chr7.3:15209550-15209569 | None:intergenic | 15.0% |
| !!! | CTATTTAATAAATTTTCATG+AGG | - | chr7.3:15210430-15210449 | MS.gene46313:CDS | 15.0% |
| !!! | TTTAAGAAAATTTTGAAGAT+TGG | + | chr7.3:15208130-15208149 | None:intergenic | 15.0% |
| !!! | TTTTTGTGATTTAATATCTA+AGG | + | chr7.3:15209746-15209765 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAACAGAAACA+TGG | + | chr7.3:15208428-15208447 | None:intergenic | 20.0% |
| !! | AATGGCAAAATTTGTATATA+TGG | - | chr7.3:15210768-15210787 | MS.gene46313:CDS | 20.0% |
| !! | ACTCATTTAAATGTTTAAGT+GGG | + | chr7.3:15210534-15210553 | None:intergenic | 20.0% |
| !! | ATATAATGACATAGAATTAC+CGG | - | chr7.3:15210401-15210420 | MS.gene46313:CDS | 20.0% |
| !! | ATGGCAAAATTTGTATATAT+GGG | - | chr7.3:15210769-15210788 | MS.gene46313:CDS | 20.0% |
| !! | ATTATGTTATAGAAAGAACA+TGG | - | chr7.3:15209962-15209981 | MS.gene46313:intron | 20.0% |
| !! | ATTCCAAATCAATTAGAAAT+TGG | - | chr7.3:15209247-15209266 | MS.gene46313:intron | 20.0% |
| !! | ATTTATTAAATAGGTCTTAC+CGG | + | chr7.3:15210423-15210442 | None:intergenic | 20.0% |
| !! | TATGAAAAAGTGAAAAAAGA+GGG | + | chr7.3:15210109-15210128 | None:intergenic | 20.0% |
| !! | TTATGAAAAAGTGAAAAAAG+AGG | + | chr7.3:15210110-15210129 | None:intergenic | 20.0% |
| !! | TTCCAAATCAATTAGAAATT+GGG | - | chr7.3:15209248-15209267 | MS.gene46313:intron | 20.0% |
| !! | TTTAACAACCTATGAATATA+AGG | - | chr7.3:15209464-15209483 | MS.gene46313:intron | 20.0% |
| !!! | ATTATTTCTCGGAAAATATT+TGG | + | chr7.3:15209416-15209435 | None:intergenic | 20.0% |
| !!! | TACTGTTAACTATTTTTGAA+TGG | - | chr7.3:15210750-15210769 | MS.gene46313:CDS | 20.0% |
| !!! | TATTTGAGTTTAAGTTTGTT+CGG | - | chr7.3:15209087-15209106 | MS.gene46313:intron | 20.0% |
| !!! | TTATTTCTCGGAAAATATTT+GGG | + | chr7.3:15209415-15209434 | None:intergenic | 20.0% |
| !!! | TTCAAAGTCAATTTTTGTTA+AGG | + | chr7.3:15209118-15209137 | None:intergenic | 20.0% |
| ! | AAACCATATTTCGTATGAAT+TGG | + | chr7.3:15210658-15210677 | None:intergenic | 25.0% |
| ! | AAATTTAATTACTGCGTACT+AGG | - | chr7.3:15209895-15209914 | MS.gene46313:intron | 25.0% |
| ! | AACCCAATTTCTAATTGATT+TGG | + | chr7.3:15209253-15209272 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr7.3:15210179-15210198 | None:intergenic | 25.0% |
| ! | AGAAGTTAGTATTACGTTAA+CGG | - | chr7.3:15208314-15208333 | MS.gene46313:intron | 25.0% |
| ! | CACTCATTTAAATGTTTAAG+TGG | + | chr7.3:15210535-15210554 | None:intergenic | 25.0% |
| ! | GGTATTGTCATAAAAGTAAA+AGG | + | chr7.3:15209529-15209548 | None:intergenic | 25.0% |
| ! | GTAATACTAACTTCTTCATT+AGG | + | chr7.3:15208309-15208328 | None:intergenic | 25.0% |
| ! | TAAAAAAATATTAAGGGAGG+AGG | - | chr7.3:15209012-15209031 | MS.gene46313:intron | 25.0% |
| ! | TACGAAATATGGTTTATGAT+TGG | - | chr7.3:15210663-15210682 | MS.gene46313:CDS | 25.0% |
| ! | TATAACATATGCATATCCAA+TGG | - | chr7.3:15208893-15208912 | MS.gene46313:intron | 25.0% |
| ! | TGTGATTTAATATCTAAGGA+CGG | + | chr7.3:15209742-15209761 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr7.3:15210191-15210210 | MS.gene46313:intron | 25.0% |
| !! | GATGCTCATATATTATTTCT+CGG | + | chr7.3:15209427-15209446 | None:intergenic | 25.0% |
| !! | TAGTTTCTTTGATTGATGAT+AGG | - | chr7.3:15208801-15208820 | MS.gene46313:intron | 25.0% |
| !!! | ACGTATATCTTTTTTAGTCA+TGG | + | chr7.3:15208928-15208947 | None:intergenic | 25.0% |
| !!! | GTTTCTGTTTTTTCATTTTC+TGG | - | chr7.3:15208429-15208448 | MS.gene46313:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr7.3:15210178-15210197 | MS.gene46313:intron | 25.0% |
| !!! | TTTCTAATTGATTTGGAATG+AGG | + | chr7.3:15209246-15209265 | None:intergenic | 25.0% |
| AGAAACACGGTTAAATGTTA+GGG | - | chr7.3:15208386-15208405 | MS.gene46313:intron | 30.0% | |
| ATATGAAGCGACAACTAAAA+GGG | - | chr7.3:15210850-15210869 | MS.gene46313:CDS | 30.0% | |
| CAACCAATTCATACGAAATA+TGG | - | chr7.3:15210652-15210671 | MS.gene46313:CDS | 30.0% | |
| CATATTTCGTATGAATTGGT+TGG | + | chr7.3:15210654-15210673 | None:intergenic | 30.0% | |
| GAAGTTAGTATTACGTTAAC+GGG | - | chr7.3:15208315-15208334 | MS.gene46313:intron | 30.0% | |
| GCAAGATTTGAATAGGAATA+TGG | - | chr7.3:15210940-15210959 | MS.gene46313:CDS | 30.0% | |
| GGTTCATAATAAGCATGATA+TGG | - | chr7.3:15208518-15208537 | MS.gene46313:intron | 30.0% | |
| TAATTCGGATGTGTTTATAG+AGG | - | chr7.3:15210065-15210084 | MS.gene46313:intron | 30.0% | |
| TCAAAAATGGAGAAATCTTG+TGG | + | chr7.3:15208662-15208681 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr7.3:15210153-15210172 | None:intergenic | 30.0% | |
| TCAGCATTAGGATTCAAAAA+TGG | + | chr7.3:15208675-15208694 | None:intergenic | 30.0% | |
| TTCTCATTAATAAGAAACCC+TGG | + | chr7.3:15208555-15208574 | None:intergenic | 30.0% | |
| TTGGGAACGTGAAATTTAAA+GGG | - | chr7.3:15208460-15208479 | MS.gene46313:intron | 30.0% | |
| ! | AAAAAAGAGGGTCCTTTTAA+AGG | + | chr7.3:15210097-15210116 | None:intergenic | 30.0% |
| ! | ATGTTTATGTTTGGAACTAC+AGG | - | chr7.3:15208048-15208067 | MS.gene46313:CDS | 30.0% |
| ! | ATTTAGGGGTTAAGATTTTG+AGG | - | chr7.3:15208496-15208515 | MS.gene46313:intron | 30.0% |
| ! | TATGGTTTATGATTGGTTGA+CGG | - | chr7.3:15210670-15210689 | MS.gene46313:CDS | 30.0% |
| ! | TTAAAGTGTCTAATTGGTCA+TGG | + | chr7.3:15209660-15209679 | None:intergenic | 30.0% |
| ! | TTTAGGGGTTAAGATTTTGA+GGG | - | chr7.3:15208497-15208516 | MS.gene46313:intron | 30.0% |
| ! | TTTTTCATTTTCTGGACCTA+GGG | - | chr7.3:15208437-15208456 | MS.gene46313:intron | 30.0% |
| !! | ATTCTCTAGAGTGGATAATT+CGG | - | chr7.3:15210024-15210043 | MS.gene46313:intron | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr7.3:15210276-15210295 | None:intergenic | 30.0% |
| !!! | AAGTTTTAGGAGAAGTGAAA+AGG | - | chr7.3:15208268-15208287 | MS.gene46313:CDS | 30.0% |
| !!! | TTTTTTCATTTTCTGGACCT+AGG | - | chr7.3:15208436-15208455 | MS.gene46313:intron | 30.0% |
| AACTAAAAGGGACATTGCTT+TGG | - | chr7.3:15210862-15210881 | MS.gene46313:CDS | 35.0% | |
| ACCGATAGACAAACAAAAGA+CGG | - | chr7.3:15208219-15208238 | MS.gene46313:CDS | 35.0% | |
| AGAGAGAAAAAGTAAGAGAG+AGG | - | chr7.3:15210214-15210233 | MS.gene46313:intron | 35.0% | |
| ATTAAGGGAGGAGGTAATAT+TGG | - | chr7.3:15209021-15209040 | MS.gene46313:intron | 35.0% | |
| ATTGGAGGCAAGATTTGAAT+AGG | - | chr7.3:15210933-15210952 | MS.gene46313:CDS | 35.0% | |
| CAAGGAATGTCTTGGTAAAT+AGG | + | chr7.3:15208153-15208172 | None:intergenic | 35.0% | |
| CAGAAACACGGTTAAATGTT+AGG | - | chr7.3:15208385-15208404 | MS.gene46313:intron | 35.0% | |
| CGGTTAAATGTTAGGGAAAA+TGG | - | chr7.3:15208393-15208412 | MS.gene46313:intron | 35.0% | |
| CGTGAAATTTAAAGGGAGAT+TGG | - | chr7.3:15208467-15208486 | MS.gene46313:intron | 35.0% | |
| CGTTTGATATAGCAGAAACA+CGG | - | chr7.3:15208373-15208392 | MS.gene46313:intron | 35.0% | |
| CTGAGGATATTGATATTCCA+TGG | - | chr7.3:15208601-15208620 | MS.gene46313:intron | 35.0% | |
| GAGATTGGAGAAACATTTAG+GGG | - | chr7.3:15208482-15208501 | MS.gene46313:intron | 35.0% | |
| GATATGAAGCGACAACTAAA+AGG | - | chr7.3:15210849-15210868 | MS.gene46313:CDS | 35.0% | |
| GCAAACTTTAATAACCACTC+AGG | + | chr7.3:15208582-15208601 | None:intergenic | 35.0% | |
| GGAGATTGGAGAAACATTTA+GGG | - | chr7.3:15208481-15208500 | MS.gene46313:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr7.3:15210271-15210290 | MS.gene46313:intron | 35.0% | |
| GTTGGGAACGTGAAATTTAA+AGG | - | chr7.3:15208459-15208478 | MS.gene46313:intron | 35.0% | |
| TACTGTGACTCATGTTGAAT+GGG | - | chr7.3:15208101-15208120 | MS.gene46313:CDS | 35.0% | |
| TAGAGGATGACACCTTTAAA+AGG | - | chr7.3:15210082-15210101 | MS.gene46313:intron | 35.0% | |
| TCTTTGTGGAGTGGATAATT+CGG | - | chr7.3:15210050-15210069 | MS.gene46313:intron | 35.0% | |
| TTAAATGAGTGCGCTATATG+CGG | - | chr7.3:15210544-15210563 | MS.gene46313:CDS | 35.0% | |
| TTATCGTTATCTATCGTGTC+CGG | - | chr7.3:15209620-15209639 | MS.gene46313:intron | 35.0% | |
| TTCAAATCTTGCCTCCAATT+TGG | + | chr7.3:15210932-15210951 | None:intergenic | 35.0% | |
| ! | AATAGACACATTCTCTAGAG+TGG | - | chr7.3:15210015-15210034 | MS.gene46313:intron | 35.0% |
| ! | CATATGCCTATCGTTTTCAT+TGG | - | chr7.3:15210594-15210613 | MS.gene46313:CDS | 35.0% |
| ! | CCTATCGTTTTCATTGGTAT+GGG | - | chr7.3:15210600-15210619 | MS.gene46313:CDS | 35.0% |
| ! | GGAATGAGGATTTGCATTTT+TGG | + | chr7.3:15209232-15209251 | None:intergenic | 35.0% |
| ! | TCTGCTAGAGAACAAGTTTT+AGG | - | chr7.3:15208255-15208274 | MS.gene46313:CDS | 35.0% |
| ! | TGCGTGTTAAAGTGTCTAAT+TGG | + | chr7.3:15209666-15209685 | None:intergenic | 35.0% |
| !! | ACCGTCTTTTGTTTGTCTAT+CGG | + | chr7.3:15208223-15208242 | None:intergenic | 35.0% |
| !! | GTATAACTTTGATGATGAGC+AGG | - | chr7.3:15210807-15210826 | MS.gene46313:CDS | 35.0% |
| !! | GTGGTTATTAAAGTTTGCTG+AGG | - | chr7.3:15208584-15208603 | MS.gene46313:intron | 35.0% |
| AAATCTTGCCTCCAATTTGG+TGG | + | chr7.3:15210929-15210948 | None:intergenic | 40.0% | |
| AACACGCAACAATGATCTTC+AGG | - | chr7.3:15209678-15209697 | MS.gene46313:intron | 40.0% | |
| AATATGGTGAAGACCGAAGA+TGG | - | chr7.3:15210956-15210975 | MS.gene46313:CDS | 40.0% | |
| ACGTTAACGGGACATAGTTT+AGG | - | chr7.3:15208327-15208346 | MS.gene46313:intron | 40.0% | |
| AGATGCACATGCAAAATACG+TGG | + | chr7.3:15208780-15208799 | None:intergenic | 40.0% | |
| ATAAGAAACCCTGGTGACTT+TGG | + | chr7.3:15208546-15208565 | None:intergenic | 40.0% | |
| ATGAAGAGATGAGTCCTATC+TGG | + | chr7.3:15211051-15211070 | None:intergenic | 40.0% | |
| CCCATACCAATGAAAACGAT+AGG | + | chr7.3:15210603-15210622 | None:intergenic | 40.0% | |
| CGTTAACGGGACATAGTTTA+GGG | - | chr7.3:15208328-15208347 | MS.gene46313:intron | 40.0% | |
| GATGAGTATCTGCAAGTTGT+GGG | + | chr7.3:15211003-15211022 | None:intergenic | 40.0% | |
| GGACATTGCTTTGGTGAATA+AGG | - | chr7.3:15210871-15210890 | MS.gene46313:CDS | 40.0% | |
| GGATAATTCGGATGTCTTTG+TGG | - | chr7.3:15210036-15210055 | MS.gene46313:intron | 40.0% | |
| GGGAGATTGGAGAAACATTT+AGG | - | chr7.3:15208480-15208499 | MS.gene46313:intron | 40.0% | |
| GTACTGTGACTCATGTTGAA+TGG | - | chr7.3:15208100-15208119 | MS.gene46313:CDS | 40.0% | |
| TATCGTTATCTATCGTGTCC+GGG | - | chr7.3:15209621-15209640 | MS.gene46313:intron | 40.0% | |
| TGAAGAGATGAGTCCTATCT+GGG | + | chr7.3:15211050-15211069 | None:intergenic | 40.0% | |
| TGATCTTCAGGACTAGAAAG+AGG | - | chr7.3:15209690-15209709 | MS.gene46313:intron | 40.0% | |
| TGATGAGTATCTGCAAGTTG+TGG | + | chr7.3:15211004-15211023 | None:intergenic | 40.0% | |
| TGTTGGAGTTGAGTTAGAGT+TGG | - | chr7.3:15208635-15208654 | MS.gene46313:intron | 40.0% | |
| TTAATGAGAAATCGCCTGAG+TGG | - | chr7.3:15208565-15208584 | MS.gene46313:intron | 40.0% | |
| ! | ATCGTTTTCATTGGTATGGG+CGG | - | chr7.3:15210603-15210622 | MS.gene46313:CDS | 40.0% |
| ! | GCCTATCGTTTTCATTGGTA+TGG | - | chr7.3:15210599-15210618 | MS.gene46313:CDS | 40.0% |
| ! | TAGTTGTCGCTTCATATCCA+CGG | + | chr7.3:15210847-15210866 | None:intergenic | 40.0% |
| !! | ACATAGTTTAGGGAGTGCTA+TGG | - | chr7.3:15208338-15208357 | MS.gene46313:intron | 40.0% |
| !!! | ATTTTCATGAGGTGTCGAGT+TGG | - | chr7.3:15210441-15210460 | MS.gene46313:CDS | 40.0% |
| AACGATGTTCGAGTAGAAGC+AGG | - | chr7.3:15208180-15208199 | MS.gene46313:CDS | 45.0% | |
| AATTTCACGTTCCCAACCCT+AGG | + | chr7.3:15208456-15208475 | None:intergenic | 45.0% | |
| ACCTATGATAGGTCCGTAAG+GGG | + | chr7.3:15209717-15209736 | None:intergenic | 45.0% | |
| ACTAGAAAGAGGTCCCCTTA+CGG | - | chr7.3:15209701-15209720 | MS.gene46313:intron | 45.0% | |
| AGTCCTATCTGGGAGAGATA+AGG | + | chr7.3:15211040-15211059 | None:intergenic | 45.0% | |
| ATCGTTATCTATCGTGTCCG+GGG | - | chr7.3:15209622-15209641 | MS.gene46313:intron | 45.0% | |
| ATTCGGATGTCTTTGTGGAG+TGG | - | chr7.3:15210041-15210060 | MS.gene46313:intron | 45.0% | |
| CCAACATGAGTGTAACACCA+TGG | + | chr7.3:15208621-15208640 | None:intergenic | 45.0% | |
| GACCTATGATAGGTCCGTAA+GGG | + | chr7.3:15209718-15209737 | None:intergenic | 45.0% | |
| GCACATGCAAAATACGTGGT+TGG | + | chr7.3:15208776-15208795 | None:intergenic | 45.0% | |
| GTCATGGATCAATGCACCAT+TGG | + | chr7.3:15208912-15208931 | None:intergenic | 45.0% | |
| TAAGGACGGTGACCTATGAT+AGG | + | chr7.3:15209728-15209747 | None:intergenic | 45.0% | |
| TCTACTCGAACATCGTTGTC+TGG | + | chr7.3:15208177-15208196 | None:intergenic | 45.0% | |
| TGACCTATGATAGGTCCGTA+AGG | + | chr7.3:15209719-15209738 | None:intergenic | 45.0% | |
| TGCATGTGCTCATAACTTGG+AGG | - | chr7.3:15208698-15208717 | MS.gene46313:intron | 45.0% | |
| TGCTGCATGTGCTCATAACT+TGG | - | chr7.3:15208695-15208714 | MS.gene46313:intron | 45.0% | |
| TGTCTGGACAAGGAATGTCT+TGG | + | chr7.3:15208161-15208180 | None:intergenic | 45.0% | |
| ! | ATATGGTGCCAAAGTCACCA+GGG | - | chr7.3:15208535-15208554 | MS.gene46313:intron | 45.0% |
| ! | CATTTTCTGGACCTAGGGTT+GGG | - | chr7.3:15208442-15208461 | MS.gene46313:intron | 45.0% |
| ! | TCATTTTCTGGACCTAGGGT+TGG | - | chr7.3:15208441-15208460 | MS.gene46313:intron | 45.0% |
| ! | TGATGATGAGCAGGTACCAT+GGG | - | chr7.3:15210816-15210835 | MS.gene46313:CDS | 45.0% |
| !! | CCATGGTGTTACACTCATGT+TGG | - | chr7.3:15208618-15208637 | MS.gene46313:intron | 45.0% |
| !! | TTGATGATGAGCAGGTACCA+TGG | - | chr7.3:15210815-15210834 | MS.gene46313:CDS | 45.0% |
| !! | TTGAAATAAAAAAATATTAA+GGG | - | chr7.3:15209006-15209025 | MS.gene46313:intron | 5.0% |
| !! | TTTAATTAATTTATTAAGTT+GGG | + | chr7.3:15210327-15210346 | None:intergenic | 5.0% |
| !!! | TTTGAAATAAAAAAATATTA+AGG | - | chr7.3:15209005-15209024 | MS.gene46313:intron | 5.0% |
| !!! | TTTTAATTAATTTATTAAGT+TGG | + | chr7.3:15210328-15210347 | None:intergenic | 5.0% |
| ACCCATCGAGTATGTGCAAG+TGG | + | chr7.3:15208725-15208744 | None:intergenic | 50.0% | |
| ACTCTGTGCCACCAAATTGG+AGG | - | chr7.3:15210918-15210937 | MS.gene46313:CDS | 50.0% | |
| AGCACTCTGTGCCACCAAAT+TGG | - | chr7.3:15210915-15210934 | MS.gene46313:CDS | 50.0% | |
| CCCACTTGCACATACTCGAT+GGG | - | chr7.3:15208721-15208740 | MS.gene46313:intron | 50.0% | |
| CCCATCGAGTATGTGCAAGT+GGG | + | chr7.3:15208724-15208743 | None:intergenic | 50.0% | |
| CGAACATCGTTGTCTGGACA+AGG | + | chr7.3:15208171-15208190 | None:intergenic | 50.0% | |
| GAAGACCGAAGATGGACGTT+GGG | - | chr7.3:15210964-15210983 | MS.gene46313:CDS | 50.0% | |
| GCACATGCAGCATCAGCATT+AGG | + | chr7.3:15208687-15208706 | None:intergenic | 50.0% | |
| TCCCCTTACGGACCTATCAT+AGG | - | chr7.3:15209713-15209732 | MS.gene46313:intron | 50.0% | |
| TCGTTATCTATCGTGTCCGG+GGG | - | chr7.3:15209623-15209642 | MS.gene46313:intron | 50.0% | |
| TGAAGACCGAAGATGGACGT+TGG | - | chr7.3:15210963-15210982 | MS.gene46313:CDS | 50.0% | |
| ! | GAGCCTTATCTCTCCCAGAT+AGG | - | chr7.3:15211034-15211053 | MS.gene46313:CDS | 50.0% |
| ! | GATATGGTGCCAAAGTCACC+AGG | - | chr7.3:15208534-15208553 | MS.gene46313:intron | 50.0% |
| CAGCACCCAACGTCCATCTT+CGG | + | chr7.3:15210972-15210991 | None:intergenic | 55.0% | |
| CATATCCACGGTTGCTCCCA+TGG | + | chr7.3:15210835-15210854 | None:intergenic | 55.0% | |
| GCCCACTTGCACATACTCGA+TGG | - | chr7.3:15208720-15208739 | MS.gene46313:intron | 55.0% | |
| GTAGAGACGTCGTCGTTGCT+TGG | - | chr7.3:15208073-15208092 | MS.gene46313:CDS | 55.0% | |
| TATCGTGTCCGGGGGTTTGA+GGG | - | chr7.3:15209631-15209650 | MS.gene46313:intron | 55.0% | |
| AGGTACCATGGGAGCAACCG+TGG | - | chr7.3:15210827-15210846 | MS.gene46313:CDS | 60.0% | |
| ATCGTGTCCGGGGGTTTGAG+GGG | - | chr7.3:15209632-15209651 | MS.gene46313:intron | 60.0% | |
| CGAAGATGGACGTTGGGTGC+TGG | - | chr7.3:15210970-15210989 | MS.gene46313:CDS | 60.0% | |
| CTATCGTGTCCGGGGGTTTG+AGG | - | chr7.3:15209630-15209649 | MS.gene46313:intron | 60.0% | |
| CATGGTCCCCCTCAAACCCC+CGG | + | chr7.3:15209642-15209661 | None:intergenic | 65.0% | |
| GACGTCGTCGTTGCTTGGCG+AGG | - | chr7.3:15208078-15208097 | MS.gene46313:CDS | 65.0% | |
| TCGTGTCCGGGGGTTTGAGG+GGG | - | chr7.3:15209633-15209652 | MS.gene46313:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 15208048 | 15211081 | 15208048 | ID=MS.gene46313 |
| chr7.3 | mRNA | 15208048 | 15211081 | 15208048 | ID=MS.gene46313.t1;Parent=MS.gene46313 |
| chr7.3 | exon | 15210387 | 15211081 | 15210387 | ID=MS.gene46313.t1.exon1;Parent=MS.gene46313.t1 |
| chr7.3 | CDS | 15210387 | 15211081 | 15210387 | ID=cds.MS.gene46313.t1;Parent=MS.gene46313.t1 |
| chr7.3 | exon | 15208048 | 15208300 | 15208048 | ID=MS.gene46313.t1.exon2;Parent=MS.gene46313.t1 |
| chr7.3 | CDS | 15208048 | 15208300 | 15208048 | ID=cds.MS.gene46313.t1;Parent=MS.gene46313.t1 |
| Gene Sequence |
| Protein sequence |
