Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52130.t1 | XP_024638294.1 | 94.3 | 635 | 36 | 0 | 1 | 635 | 1 | 635 | 0.00E+00 | 1219.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52130.t1 | P36428 | 49.4 | 954 | 163 | 2 | 1 | 634 | 49 | 1002 | 8.6e-244 | 844.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52130.t1 | A0A396ICW9 | 94.3 | 635 | 36 | 0 | 1 | 635 | 1 | 635 | 0.0e+00 | 1219.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene52130 | 0.826624 | 2.45E-54 | -1.69E-46 |
MS.gene049254 | MS.gene52130 | 0.849018 | 4.23E-60 | -1.69E-46 |
MS.gene049272 | MS.gene52130 | 0.820451 | 6.81E-53 | -1.69E-46 |
MS.gene049404 | MS.gene52130 | 0.808728 | 2.69E-50 | -1.69E-46 |
MS.gene049452 | MS.gene52130 | 0.804353 | 2.25E-49 | -1.69E-46 |
MS.gene049501 | MS.gene52130 | 0.815094 | 1.10E-51 | -1.69E-46 |
MS.gene049567 | MS.gene52130 | 0.803672 | 3.12E-49 | -1.69E-46 |
MS.gene049669 | MS.gene52130 | 0.810784 | 9.70E-51 | -1.69E-46 |
MS.gene049825 | MS.gene52130 | 0.818596 | 1.80E-52 | -1.69E-46 |
MS.gene049850 | MS.gene52130 | 0.805829 | 1.11E-49 | -1.69E-46 |
MS.gene049873 | MS.gene52130 | 0.841577 | 4.37E-58 | -1.69E-46 |
MS.gene050026 | MS.gene52130 | 0.851291 | 9.76E-61 | -1.69E-46 |
MS.gene050029 | MS.gene52130 | 0.80163 | 8.23E-49 | -1.69E-46 |
MS.gene050355 | MS.gene52130 | 0.845968 | 2.92E-59 | -1.69E-46 |
MS.gene050442 | MS.gene52130 | 0.810021 | 1.42E-50 | -1.69E-46 |
MS.gene050559 | MS.gene52130 | 0.822007 | 2.98E-53 | -1.69E-46 |
MS.gene050561 | MS.gene52130 | 0.818158 | 2.27E-52 | -1.69E-46 |
MS.gene050562 | MS.gene52130 | 0.805402 | 1.36E-49 | -1.69E-46 |
MS.gene050799 | MS.gene52130 | 0.813476 | 2.51E-51 | -1.69E-46 |
MS.gene050844 | MS.gene52130 | 0.805292 | 1.43E-49 | -1.69E-46 |
MS.gene051181 | MS.gene52130 | 0.830698 | 2.54E-55 | -1.69E-46 |
MS.gene051198 | MS.gene52130 | 0.800062 | 1.72E-48 | -1.69E-46 |
MS.gene051247 | MS.gene52130 | 0.807087 | 6.00E-50 | -1.69E-46 |
MS.gene051279 | MS.gene52130 | 0.812027 | 5.21E-51 | -1.69E-46 |
MS.gene051594 | MS.gene52130 | 0.815311 | 9.87E-52 | -1.69E-46 |
MS.gene051744 | MS.gene52130 | 0.834278 | 3.29E-56 | -1.69E-46 |
MS.gene051957 | MS.gene52130 | 0.803281 | 3.76E-49 | -1.69E-46 |
MS.gene052208 | MS.gene52130 | 0.817768 | 2.78E-52 | -1.69E-46 |
MS.gene052519 | MS.gene52130 | 0.876752 | 1.09E-68 | -1.69E-46 |
MS.gene052582 | MS.gene52130 | 0.844586 | 6.90E-59 | -1.69E-46 |
MS.gene052584 | MS.gene52130 | 0.852884 | 3.44E-61 | -1.69E-46 |
MS.gene052685 | MS.gene52130 | 0.812687 | 3.74E-51 | -1.69E-46 |
MS.gene052773 | MS.gene52130 | 0.824277 | 8.81E-54 | -1.69E-46 |
MS.gene052863 | MS.gene52130 | 0.818944 | 1.50E-52 | -1.69E-46 |
MS.gene052867 | MS.gene52130 | 0.827371 | 1.62E-54 | -1.69E-46 |
MS.gene053006 | MS.gene52130 | 0.808438 | 3.10E-50 | -1.69E-46 |
MS.gene053145 | MS.gene52130 | 0.819499 | 1.12E-52 | -1.69E-46 |
MS.gene053226 | MS.gene52130 | 0.831133 | 1.98E-55 | -1.69E-46 |
MS.gene05365 | MS.gene52130 | 0.813982 | 1.94E-51 | -1.69E-46 |
MS.gene053883 | MS.gene52130 | 0.816154 | 6.40E-52 | -1.69E-46 |
MS.gene053900 | MS.gene52130 | 0.816869 | 4.43E-52 | -1.69E-46 |
MS.gene053953 | MS.gene52130 | 0.801235 | 9.91E-49 | -1.69E-46 |
MS.gene053966 | MS.gene52130 | 0.802737 | 4.87E-49 | -1.69E-46 |
MS.gene053974 | MS.gene52130 | 0.805784 | 1.13E-49 | -1.69E-46 |
MS.gene05414 | MS.gene52130 | 0.832005 | 1.21E-55 | -1.69E-46 |
MS.gene05415 | MS.gene52130 | 0.830584 | 2.70E-55 | -1.69E-46 |
MS.gene054236 | MS.gene52130 | 0.837109 | 6.31E-57 | -1.69E-46 |
MS.gene05423 | MS.gene52130 | 0.810028 | 1.41E-50 | -1.69E-46 |
MS.gene054651 | MS.gene52130 | 0.855779 | 5.02E-62 | -1.69E-46 |
MS.gene054775 | MS.gene52130 | 0.817313 | 3.52E-52 | -1.69E-46 |
MS.gene054967 | MS.gene52130 | 0.806564 | 7.74E-50 | -1.69E-46 |
MS.gene055166 | MS.gene52130 | 0.831278 | 1.83E-55 | -1.69E-46 |
MS.gene055228 | MS.gene52130 | 0.806541 | 7.82E-50 | -1.69E-46 |
MS.gene055466 | MS.gene52130 | 0.814304 | 1.65E-51 | -1.69E-46 |
MS.gene055586 | MS.gene52130 | 0.824487 | 7.86E-54 | -1.69E-46 |
MS.gene055589 | MS.gene52130 | 0.8415 | 4.58E-58 | -1.69E-46 |
MS.gene055778 | MS.gene52130 | 0.836334 | 9.94E-57 | -1.69E-46 |
MS.gene055808 | MS.gene52130 | 0.811273 | 7.60E-51 | -1.69E-46 |
MS.gene055818 | MS.gene52130 | 0.856789 | 2.54E-62 | -1.69E-46 |
MS.gene055841 | MS.gene52130 | 0.800463 | 1.42E-48 | -1.69E-46 |
MS.gene056050 | MS.gene52130 | 0.800007 | 1.76E-48 | -1.69E-46 |
MS.gene056091 | MS.gene52130 | 0.801071 | 1.07E-48 | -1.69E-46 |
MS.gene056174 | MS.gene52130 | 0.824484 | 7.87E-54 | -1.69E-46 |
MS.gene056215 | MS.gene52130 | 0.81255 | 4.01E-51 | -1.69E-46 |
MS.gene056366 | MS.gene52130 | 0.820898 | 5.38E-53 | -1.69E-46 |
MS.gene056498 | MS.gene52130 | 0.806593 | 7.63E-50 | -1.69E-46 |
MS.gene056506 | MS.gene52130 | 0.814957 | 1.18E-51 | -1.69E-46 |
MS.gene056595 | MS.gene52130 | 0.818545 | 1.85E-52 | -1.69E-46 |
MS.gene05686 | MS.gene52130 | 0.800242 | 1.58E-48 | -1.69E-46 |
MS.gene05690 | MS.gene52130 | 0.82454 | 7.64E-54 | -1.69E-46 |
MS.gene057026 | MS.gene52130 | 0.832335 | 1.00E-55 | -1.69E-46 |
MS.gene057027 | MS.gene52130 | 0.826755 | 2.28E-54 | -1.69E-46 |
MS.gene057060 | MS.gene52130 | 0.81025 | 1.27E-50 | -1.69E-46 |
MS.gene057208 | MS.gene52130 | 0.816326 | 5.86E-52 | -1.69E-46 |
MS.gene057314 | MS.gene52130 | 0.804109 | 2.53E-49 | -1.69E-46 |
MS.gene057414 | MS.gene52130 | 0.811424 | 7.05E-51 | -1.69E-46 |
MS.gene057444 | MS.gene52130 | 0.828392 | 9.22E-55 | -1.69E-46 |
MS.gene057693 | MS.gene52130 | 0.811627 | 6.37E-51 | -1.69E-46 |
MS.gene057915 | MS.gene52130 | 0.801481 | 8.82E-49 | -1.69E-46 |
MS.gene058037 | MS.gene52130 | 0.957895 | 8.94E-116 | -1.69E-46 |
MS.gene058294 | MS.gene52130 | 0.804504 | 2.09E-49 | -1.69E-46 |
MS.gene058625 | MS.gene52130 | 0.864696 | 1.01E-64 | -1.69E-46 |
MS.gene058829 | MS.gene52130 | 0.802314 | 5.95E-49 | -1.69E-46 |
MS.gene058979 | MS.gene52130 | 0.81295 | 3.27E-51 | -1.69E-46 |
MS.gene059015 | MS.gene52130 | 0.812411 | 4.30E-51 | -1.69E-46 |
MS.gene059272 | MS.gene52130 | 0.850781 | 1.36E-60 | -1.69E-46 |
MS.gene05954 | MS.gene52130 | 0.847195 | 1.35E-59 | -1.69E-46 |
MS.gene059584 | MS.gene52130 | 0.832882 | 7.34E-56 | -1.69E-46 |
MS.gene059625 | MS.gene52130 | 0.821876 | 3.20E-53 | -1.69E-46 |
MS.gene059842 | MS.gene52130 | 0.80909 | 2.25E-50 | -1.69E-46 |
MS.gene059935 | MS.gene52130 | 0.803561 | 3.29E-49 | -1.69E-46 |
MS.gene060011 | MS.gene52130 | 0.805646 | 1.21E-49 | -1.69E-46 |
MS.gene060167 | MS.gene52130 | 0.811621 | 6.39E-51 | -1.69E-46 |
MS.gene060312 | MS.gene52130 | 0.801741 | 7.80E-49 | -1.69E-46 |
MS.gene060322 | MS.gene52130 | 0.82655 | 2.55E-54 | -1.69E-46 |
MS.gene060365 | MS.gene52130 | 0.804666 | 1.94E-49 | -1.69E-46 |
MS.gene060429 | MS.gene52130 | 0.821168 | 4.66E-53 | -1.69E-46 |
MS.gene060521 | MS.gene52130 | 0.844322 | 8.12E-59 | -1.69E-46 |
MS.gene060572 | MS.gene52130 | 0.825621 | 4.24E-54 | -1.69E-46 |
MS.gene060781 | MS.gene52130 | 0.802839 | 4.64E-49 | -1.69E-46 |
MS.gene060919 | MS.gene52130 | 0.803127 | 4.04E-49 | -1.69E-46 |
MS.gene061040 | MS.gene52130 | -0.820669 | 6.07E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52130.t1 | MTR_4g074670 | 94.016 | 635 | 38 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1219 |
MS.gene52130.t1 | MTR_4g074640 | 87.473 | 463 | 58 | 0 | 1 | 463 | 1 | 463 | 0.0 | 872 |
MS.gene52130.t1 | MTR_4g074640 | 89.080 | 174 | 19 | 0 | 461 | 634 | 776 | 949 | 8.42e-81 | 275 |
MS.gene52130.t1 | MTR_4g074670 | 93.377 | 453 | 30 | 0 | 183 | 635 | 1 | 453 | 0.0 | 845 |
MS.gene52130.t1 | MTR_3g118360 | 38.395 | 461 | 243 | 12 | 16 | 459 | 86 | 522 | 5.69e-86 | 287 |
MS.gene52130.t1 | MTR_3g118360 | 38.395 | 461 | 243 | 12 | 16 | 459 | 86 | 522 | 6.66e-86 | 287 |
MS.gene52130.t1 | MTR_3g118360 | 38.395 | 461 | 243 | 12 | 16 | 459 | 86 | 522 | 2.05e-85 | 288 |
MS.gene52130.t1 | MTR_3g118360 | 34.800 | 250 | 142 | 7 | 225 | 459 | 1 | 244 | 1.21e-25 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52130.t1 | AT1G50200 | 77.970 | 463 | 102 | 0 | 1 | 463 | 49 | 511 | 0.0 | 784 |
MS.gene52130.t1 | AT1G50200 | 57.286 | 199 | 76 | 2 | 445 | 634 | 812 | 1010 | 1.28e-42 | 165 |
MS.gene52130.t1 | AT1G50200 | 77.970 | 463 | 102 | 0 | 1 | 463 | 49 | 511 | 0.0 | 783 |
MS.gene52130.t1 | AT1G50200 | 59.686 | 191 | 76 | 1 | 445 | 634 | 812 | 1002 | 5.72e-45 | 172 |
MS.gene52130.t1 | AT5G22800 | 39.177 | 462 | 239 | 10 | 16 | 459 | 83 | 520 | 1.61e-93 | 310 |
MS.gene52130.t1 | AT5G22800 | 39.224 | 464 | 236 | 11 | 16 | 459 | 108 | 545 | 1.69e-93 | 310 |
Find 160 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTATTTATGTTACATATTT+TGG | 0.110523 | 4.1:-29353580 | MS.gene52130:CDS |
TTTCAGCAGAAACTTGTTTA+AGG | 0.156517 | 4.1:-29350903 | MS.gene52130:intron |
TTCTTTAAAGTAGTCGTTAA+AGG | 0.175928 | 4.1:+29353992 | None:intergenic |
TCTTTGGATAGGACAATTTC+TGG | 0.221333 | 4.1:-29352991 | MS.gene52130:intron |
AGTAAACAAAATACCTTCTT+TGG | 0.243214 | 4.1:+29350263 | None:intergenic |
TTCTGGGAGATGGGTGTTAC+TGG | 0.254119 | 4.1:-29352974 | MS.gene52130:CDS |
CACCAGCTCGGATACACTTC+TGG | 0.260893 | 4.1:+29354090 | None:intergenic |
ATGGAACCTTGTCTTTATTC+AGG | 0.262339 | 4.1:-29352855 | MS.gene52130:intron |
CCTACCTGTGTAAGATCTAA+TGG | 0.290403 | 4.1:+29350462 | None:intergenic |
CCTGGACGCGTTCTTCCTTT+TGG | 0.303076 | 4.1:-29353490 | MS.gene52130:CDS |
TTGTCTCACCACAGTTCAAT+AGG | 0.310218 | 4.1:-29352586 | MS.gene52130:intron |
AACAAAGTGAAGAGCGAATT+AGG | 0.312729 | 4.1:-29350952 | MS.gene52130:CDS |
CAAAGCGGTTGAACATGTTC+AGG | 0.327482 | 4.1:-29350668 | MS.gene52130:CDS |
CCCGTGTCAACATGCTTTGC+AGG | 0.333638 | 4.1:+29352536 | None:intergenic |
TTTGAGTTGTCCGATACATT+TGG | 0.342799 | 4.1:-29350489 | MS.gene52130:CDS |
GTGTCTCTGACGCGCTTTGC+CGG | 0.352640 | 4.1:+29354572 | None:intergenic |
AACAGCTAGGTCTGCCTTCT+CGG | 0.358340 | 4.1:+29349680 | None:intergenic |
CAAGACCCATAGCCTCATTT+AGG | 0.364799 | 4.1:+29348507 | None:intergenic |
CCAGATATAATACCTGAGAT+AGG | 0.367795 | 4.1:+29349902 | None:intergenic |
TTGAGTTGTCCGATACATTT+GGG | 0.375682 | 4.1:-29350488 | MS.gene52130:CDS |
ATATCTCTAGCTTCATTGTC+AGG | 0.386843 | 4.1:+29353532 | None:intergenic |
TCTTCGAGATGCTGGGTAAC+TGG | 0.393796 | 4.1:-29354016 | MS.gene52130:CDS |
AGAATGGCTGAGTAATGCTT+TGG | 0.394510 | 4.1:-29349235 | MS.gene52130:CDS |
TTCCATATCTCCATGCAGTT+AGG | 0.401659 | 4.1:+29352872 | None:intergenic |
GAATGGCTGAGTAATGCTTT+GGG | 0.404215 | 4.1:-29349234 | MS.gene52130:CDS |
AGTTTGCTCACAGCGGTGTT+AGG | 0.405666 | 4.1:+29354131 | None:intergenic |
ACTGGTGCTCGGCCATACTC+TGG | 0.415014 | 4.1:-29351830 | MS.gene52130:CDS |
GATACACTTCTGGGTATTGC+AGG | 0.419922 | 4.1:+29354100 | None:intergenic |
TGTCTCACCACAGTTCAATA+GGG | 0.422461 | 4.1:-29352585 | MS.gene52130:intron |
TCACACCTTCTTCGAGATGC+TGG | 0.424473 | 4.1:-29354024 | MS.gene52130:CDS |
ACCCTAACTGCATGGAGATA+TGG | 0.429209 | 4.1:-29352874 | MS.gene52130:CDS |
GGTCCAACTTTCCCAGAGTA+TGG | 0.429806 | 4.1:+29351818 | None:intergenic |
AAGTGTTGTGGCAAATGTGC+TGG | 0.430083 | 4.1:-29350996 | MS.gene52130:CDS |
CTACCTGTGTAAGATCTAAT+GGG | 0.439293 | 4.1:+29350463 | None:intergenic |
GCGTTAGCAAAGAGCAGAGT+AGG | 0.442176 | 4.1:+29354479 | None:intergenic |
TTAAAGAAGAAGCCATTAGC+TGG | 0.446191 | 4.1:-29353977 | MS.gene52130:CDS |
ACAATGAAGCTAGAGATATA+TGG | 0.446198 | 4.1:-29353528 | MS.gene52130:CDS |
AAGCTCCCATGCCCAGCTAA+TGG | 0.456357 | 4.1:+29353965 | None:intergenic |
TGCATATCTCACGTTGATGT+TGG | 0.459650 | 4.1:-29349639 | MS.gene52130:CDS |
TGGTCCTTGTGGACCTTGCT+CGG | 0.460019 | 4.1:-29352954 | MS.gene52130:CDS |
GTAACTCATTTACAGGCAAC+TGG | 0.460734 | 4.1:-29351848 | MS.gene52130:intron |
CTGTCAATTGCCATTGCTGA+TGG | 0.460740 | 4.1:-29351737 | MS.gene52130:CDS |
ATCACACCTAAATGAGGCTA+TGG | 0.472128 | 4.1:-29348513 | MS.gene52130:CDS |
GTGCCGGAGAAAGGAGATAA+AGG | 0.472153 | 4.1:-29349273 | MS.gene52130:CDS |
GGAAAAGGAGGTCTTGCAAC+GGG | 0.472528 | 4.1:-29349186 | MS.gene52130:CDS |
CTTTGGATAGGACAATTTCT+GGG | 0.473705 | 4.1:-29352990 | MS.gene52130:intron |
GGGAGATGTGGTAAAGGAAA+AGG | 0.476017 | 4.1:-29349201 | MS.gene52130:CDS |
ACCAGCTCGGATACACTTCT+GGG | 0.480081 | 4.1:+29354091 | None:intergenic |
ATGCTTTGGGGCCACTGAAA+GGG | 0.487479 | 4.1:-29349221 | MS.gene52130:CDS |
CGGCCATACTCTGGGAAAGT+TGG | 0.488602 | 4.1:-29351821 | MS.gene52130:CDS |
ATAAAGTTGACATGGCATAC+AGG | 0.490870 | 4.1:-29351784 | MS.gene52130:CDS |
TTTGGTGGTGATGAGAAAAC+TGG | 0.491715 | 4.1:-29353562 | MS.gene52130:CDS |
ATAGGACAATTTCTGGGAGA+TGG | 0.492087 | 4.1:-29352984 | MS.gene52130:intron |
ATCTCACGTTGATGTTGGCC+TGG | 0.492248 | 4.1:-29349634 | MS.gene52130:CDS |
TGTAGTGTGTGCTGGGGTGC+CGG | 0.494475 | 4.1:-29349289 | MS.gene52130:CDS |
TTACCTTTATCTCCTTTCTC+CGG | 0.495540 | 4.1:+29349270 | None:intergenic |
GAAGATGATTCAAGTGGAGG+AGG | 0.499656 | 4.1:-29350930 | MS.gene52130:CDS |
GGTGATGAGAAAACTGGTCT+TGG | 0.499760 | 4.1:-29353556 | MS.gene52130:CDS |
CACGAACTGCTGCAACATCC+AGG | 0.499765 | 4.1:+29349616 | None:intergenic |
TCAACTTTATCTGCATCCTC+TGG | 0.501880 | 4.1:+29351797 | None:intergenic |
AAACATACTTTACTACCAAA+AGG | 0.505158 | 4.1:+29353475 | None:intergenic |
TGCTGAATAGCATCGAAGAT+AGG | 0.505818 | 4.1:+29352443 | None:intergenic |
TTCAGGGAAATATACTGAGC+GGG | 0.508604 | 4.1:-29350651 | MS.gene52130:CDS |
GGGTTGTTGCAGATCACATC+AGG | 0.509762 | 4.1:-29351763 | MS.gene52130:CDS |
TGTGCTGGGGTGCCGGAGAA+AGG | 0.514670 | 4.1:-29349282 | MS.gene52130:CDS |
GATCGTGATAACCCTATCTC+AGG | 0.514827 | 4.1:-29349914 | MS.gene52130:intron |
GCCTGCAAAGCATGTTGACA+CGG | 0.515131 | 4.1:-29352537 | MS.gene52130:CDS |
AGGAGGTCTTGCAACGGGAC+AGG | 0.516770 | 4.1:-29349181 | MS.gene52130:intron |
TCCATATCTCCATGCAGTTA+GGG | 0.518124 | 4.1:+29352873 | None:intergenic |
AACAAAGCTGTAGTGTGTGC+TGG | 0.518252 | 4.1:-29349297 | MS.gene52130:CDS |
GTCACTTGACATTGAGTGGC+CGG | 0.519976 | 4.1:-29354591 | MS.gene52130:CDS |
AAGAGAAGAATCATGTCCAT+TGG | 0.520949 | 4.1:-29354532 | MS.gene52130:CDS |
CTCCGTCGAGCAGTTCGGTA+TGG | 0.522883 | 4.1:-29351321 | MS.gene52130:CDS |
AAGCATGTTGACACGGGCAT+GGG | 0.526220 | 4.1:-29352530 | MS.gene52130:CDS |
GAAAGGAGATAAAGGTAAGC+TGG | 0.527245 | 4.1:-29349265 | MS.gene52130:CDS |
CACAATGATCTTGACGATGT+GGG | 0.529980 | 4.1:-29354062 | MS.gene52130:CDS |
AATGCTTTGGGGCCACTGAA+AGG | 0.530573 | 4.1:-29349222 | MS.gene52130:CDS |
AAGAAGCCATTAGCTGGGCA+TGG | 0.530759 | 4.1:-29353971 | MS.gene52130:CDS |
AAAGCATGTTGACACGGGCA+TGG | 0.534199 | 4.1:-29352531 | MS.gene52130:CDS |
CTATGAAAGCCGCGAGGGAA+AGG | 0.534999 | 4.1:-29350298 | MS.gene52130:CDS |
TAGGAAGATGATTCAAGTGG+AGG | 0.540383 | 4.1:-29350933 | MS.gene52130:CDS |
TAGGACAATTTCTGGGAGAT+GGG | 0.543243 | 4.1:-29352983 | MS.gene52130:CDS |
TATCTTCGATGCTATTCAGC+AGG | 0.543580 | 4.1:-29352441 | MS.gene52130:intron |
CAGATATAATACCTGAGATA+GGG | 0.545533 | 4.1:+29349903 | None:intergenic |
ACAAAGCTGTAGTGTGTGCT+GGG | 0.548423 | 4.1:-29349296 | MS.gene52130:CDS |
TTACCACATCTCCCTTTCAG+TGG | 0.549551 | 4.1:+29349210 | None:intergenic |
CACACCTTCTTCGAGATGCT+GGG | 0.551474 | 4.1:-29354023 | MS.gene52130:CDS |
GGGTCATTGAGAGGAACGAC+AGG | 0.554085 | 4.1:+29354500 | None:intergenic |
CCAAAAGGAAGAACGCGTCC+AGG | 0.558166 | 4.1:+29353490 | None:intergenic |
CTGAAAGGGAGATGTGGTAA+AGG | 0.558294 | 4.1:-29349207 | MS.gene52130:CDS |
AAACTAAAAGTCGACGTCGA+AGG | 0.559285 | 4.1:-29350332 | MS.gene52130:CDS |
CTGGTGCTCGGCCATACTCT+GGG | 0.561334 | 4.1:-29351829 | MS.gene52130:CDS |
AAAGCGGTTGAACATGTTCA+GGG | 0.562548 | 4.1:-29350667 | MS.gene52130:CDS |
ACCCAGAAGTGTATCCGAGC+TGG | 0.562570 | 4.1:-29354092 | MS.gene52130:CDS |
GTTACCCAGCATCTCGAAGA+AGG | 0.564833 | 4.1:+29354019 | None:intergenic |
TGAAGTGCTAAGAGCTGAAG+AGG | 0.564933 | 4.1:-29351295 | MS.gene52130:CDS |
CGACAGGGCTAGACTTCCAA+TGG | 0.569521 | 4.1:+29354516 | None:intergenic |
TAATGGGAACCCAAATGTAT+CGG | 0.569622 | 4.1:+29350479 | None:intergenic |
CTGAGTCACTTGACATTGAG+TGG | 0.571422 | 4.1:-29354595 | MS.gene52130:CDS |
TCGTGCTATGAAAGCCGCGA+GGG | 0.575294 | 4.1:-29350303 | MS.gene52130:CDS |
TAAAGTTGACATGGCATACA+GGG | 0.576644 | 4.1:-29351783 | MS.gene52130:CDS |
ATGGGTGTTACTGGTCCTTG+TGG | 0.579682 | 4.1:-29352965 | MS.gene52130:CDS |
TGATCTTGACGATGTGGGGA+AGG | 0.582186 | 4.1:-29354057 | MS.gene52130:CDS |
AGAAGCCATTAGCTGGGCAT+GGG | 0.582249 | 4.1:-29353970 | MS.gene52130:CDS |
CGTTAGCAAAGAGCAGAGTA+GGG | 0.582673 | 4.1:+29354480 | None:intergenic |
ATTTAGCGTCTGAAACAGCT+AGG | 0.584461 | 4.1:+29349667 | None:intergenic |
TAAAGAAGAAGCCATTAGCT+GGG | 0.584790 | 4.1:-29353976 | MS.gene52130:CDS |
TCAAAATGTATTTCCGAGCA+AGG | 0.586895 | 4.1:+29352941 | None:intergenic |
GCACAATGATCTTGACGATG+TGG | 0.591578 | 4.1:-29354063 | MS.gene52130:CDS |
AGATGTGGTAAAGGAAAAGG+AGG | 0.595385 | 4.1:-29349198 | MS.gene52130:CDS |
ATTGCTGATGGATCTCAACC+TGG | 0.597553 | 4.1:-29351725 | MS.gene52130:intron |
AAGTGACTCAGTTTCTCGCA+TGG | 0.597626 | 4.1:+29354607 | None:intergenic |
TCTAATGATAACTACCGAGA+AGG | 0.599734 | 4.1:-29349694 | MS.gene52130:CDS |
TATCTCTAGCTTCATTGTCA+GGG | 0.603121 | 4.1:+29353533 | None:intergenic |
AGTGTTGTGGCAAATGTGCT+GGG | 0.603198 | 4.1:-29350995 | MS.gene52130:CDS |
AATGGCTGAGTAATGCTTTG+GGG | 0.604194 | 4.1:-29349233 | MS.gene52130:CDS |
GTATACTCCGTCGAGCAGTT+CGG | 0.607892 | 4.1:-29351326 | MS.gene52130:CDS |
CCTGCAAAGCATGTTGACAC+GGG | 0.608130 | 4.1:-29352536 | MS.gene52130:CDS |
ACAATGATCTTGACGATGTG+GGG | 0.608214 | 4.1:-29354061 | MS.gene52130:CDS |
TCACACCTAAATGAGGCTAT+GGG | 0.609429 | 4.1:-29348512 | MS.gene52130:CDS |
CTCTGGGAAAGTTGGACCAG+AGG | 0.615358 | 4.1:-29351813 | MS.gene52130:CDS |
TAAACAGGGATTGTCAGTGA+TGG | 0.616674 | 4.1:-29349343 | MS.gene52130:intron |
GCATCTCGAAGAAGGTGTGA+TGG | 0.622688 | 4.1:+29354027 | None:intergenic |
ATTTACAGGCAACTGGTGCT+CGG | 0.624236 | 4.1:-29351841 | MS.gene52130:intron |
AGATGCATCACACCTAAATG+AGG | 0.624363 | 4.1:-29348519 | MS.gene52130:CDS |
TTCGTCTCTGAAAAGCAACA+TGG | 0.624802 | 4.1:-29349977 | MS.gene52130:CDS |
TCTTGCTGTGAAATTTGCAT+CGG | 0.626216 | 4.1:-29348489 | MS.gene52130:CDS |
CATTGTGCTTACCACCAGCT+CGG | 0.628479 | 4.1:+29354078 | None:intergenic |
GGATGCAGATAAAGTTGACA+TGG | 0.635267 | 4.1:-29351792 | MS.gene52130:CDS |
GTCCATACCGAACTGCTCGA+CGG | 0.638090 | 4.1:+29351319 | None:intergenic |
TGATGATGACCCTAACTGCA+TGG | 0.642486 | 4.1:-29352882 | MS.gene52130:CDS |
AAAGGAAGAACGCGTCCAGG+AGG | 0.642822 | 4.1:+29353493 | None:intergenic |
AGGTTGAGATCCATCAGCAA+TGG | 0.642979 | 4.1:+29351727 | None:intergenic |
ATTTCCGAGCAAGGTCCACA+AGG | 0.643296 | 4.1:+29352950 | None:intergenic |
CAGAAGTGTATCCGAGCTGG+TGG | 0.645334 | 4.1:-29354089 | MS.gene52130:CDS |
GTAAGCTGGATGTATCAGAA+TGG | 0.647412 | 4.1:-29349251 | MS.gene52130:CDS |
ATTCAGGCTTGTAAGTGTTG+TGG | 0.651863 | 4.1:-29351008 | MS.gene52130:intron |
AATTAGGAAGATGATTCAAG+TGG | 0.654740 | 4.1:-29350936 | MS.gene52130:CDS |
GGGCCACTGAAAGGGAGATG+TGG | 0.655092 | 4.1:-29349213 | MS.gene52130:CDS |
AGCAGAGTAGGGTCATTGAG+AGG | 0.660899 | 4.1:+29354491 | None:intergenic |
GTAACATAAATACGATCCGA+CGG | 0.661356 | 4.1:+29353589 | None:intergenic |
CAGTTCAATAGGGAGGCTGA+CGG | 0.662149 | 4.1:-29352575 | MS.gene52130:CDS |
GGATGTTGCAGCAGTTCGTG+AGG | 0.665110 | 4.1:-29349613 | MS.gene52130:CDS |
CATCAGAAAATTTAACAAAG+CGG | 0.665705 | 4.1:-29350683 | MS.gene52130:CDS |
CTCACCACAGTTCAATAGGG+AGG | 0.667275 | 4.1:-29352582 | MS.gene52130:intron |
AGGAAAAGGAGGTCTTGCAA+CGG | 0.669184 | 4.1:-29349187 | MS.gene52130:CDS |
TCAGGGAAATATACTGAGCG+GGG | 0.672252 | 4.1:-29350650 | MS.gene52130:CDS |
GTAGGTGTATAAATTACCGT+CGG | 0.674606 | 4.1:-29353605 | MS.gene52130:intron |
TTACAAAAGATGCAGCGTCG+CGG | 0.674934 | 4.1:+29352906 | None:intergenic |
GTTCCCATTAGATCTTACAC+AGG | 0.688646 | 4.1:-29350466 | MS.gene52130:intron |
ACTCTGCTCTTTGCTAACGC+CGG | 0.691496 | 4.1:-29354476 | MS.gene52130:intron |
GAAGTGCTAAGAGCTGAAGA+GGG | 0.694353 | 4.1:-29351294 | MS.gene52130:CDS |
AAAATACCTGAATAAAGACA+AGG | 0.701187 | 4.1:+29352849 | None:intergenic |
GGGAAATATACTGAGCGGGG+AGG | 0.702692 | 4.1:-29350647 | MS.gene52130:intron |
ACGAGTGAGTTTGCTCACAG+CGG | 0.717816 | 4.1:+29354124 | None:intergenic |
GTTCAGGGAAATATACTGAG+CGG | 0.720434 | 4.1:-29350652 | MS.gene52130:CDS |
CAAAGCTGTAGTGTGTGCTG+GGG | 0.725318 | 4.1:-29349295 | MS.gene52130:CDS |
GGTCATTGAGAGGAACGACA+GGG | 0.727693 | 4.1:+29354501 | None:intergenic |
TTGGTCGTGAGTATGTTCTG+AGG | 0.735828 | 4.1:-29351350 | MS.gene52130:CDS |
ATCGTGCTATGAAAGCCGCG+AGG | 0.751278 | 4.1:-29350304 | MS.gene52130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAATATAATATGCTT+GGG | - | chr4.1:29352479-29352498 | MS.gene52130:CDS | 10.0% |
!! | ATGATATTAAAACTAAATAT+AGG | + | chr4.1:29353302-29353321 | None:intergenic | 10.0% |
!! | ATTATAATAGTTCATAAATT+CGG | + | chr4.1:29349828-29349847 | None:intergenic | 10.0% |
!! | ATTTCAAATGAAAAATTAAA+TGG | - | chr4.1:29349975-29349994 | MS.gene52130:CDS | 10.0% |
!!! | TAAATGGATATTTTAAATAA+TGG | - | chr4.1:29349991-29350010 | MS.gene52130:intron | 10.0% |
!! | AAAAAAAAAAAAAACTCAGA+TGG | + | chr4.1:29352270-29352289 | None:intergenic | 15.0% |
!! | AAAACAATAAGGATAATATA+AGG | + | chr4.1:29348654-29348673 | None:intergenic | 15.0% |
!! | AAATTTGAATAAGTTAACTA+TGG | - | chr4.1:29349265-29349284 | MS.gene52130:CDS | 15.0% |
!! | AACAAAAACTAATAAAATAG+CGG | + | chr4.1:29348774-29348793 | None:intergenic | 15.0% |
!! | AATTCAAAATCCTTAATAAA+TGG | + | chr4.1:29351543-29351562 | None:intergenic | 15.0% |
!! | ATATAAGATACAAATTTCAT+TGG | + | chr4.1:29350379-29350398 | None:intergenic | 15.0% |
!! | ATTATATTGTAAATTGTTTC+TGG | - | chr4.1:29350036-29350055 | MS.gene52130:intron | 15.0% |
!! | GATATTTAATATAATATGCT+TGG | - | chr4.1:29352478-29352497 | MS.gene52130:CDS | 15.0% |
!! | TATTTACAATGAATTTGATT+TGG | - | chr4.1:29354085-29354104 | MS.gene52130:CDS | 15.0% |
!! | TTTAATATCATAATTCTTGT+AGG | - | chr4.1:29353311-29353330 | MS.gene52130:intron | 15.0% |
!!! | AAATTTTCTACCATTTATTA+AGG | - | chr4.1:29351530-29351549 | MS.gene52130:intron | 15.0% |
!!! | AAGCTTTTCATTTTATTTTT+AGG | - | chr4.1:29348829-29348848 | MS.gene52130:intron | 15.0% |
!!! | AGCTTTTCATTTTATTTTTA+GGG | - | chr4.1:29348830-29348849 | MS.gene52130:intron | 15.0% |
!!! | ATTTTTGTATTAAAAGAGAA+AGG | - | chr4.1:29354178-29354197 | MS.gene52130:intron | 15.0% |
!!! | TTAAAAAGCATGTAAATTAT+AGG | + | chr4.1:29349907-29349926 | None:intergenic | 15.0% |
!!! | TTTTTGTATTAAAAGAGAAA+GGG | - | chr4.1:29354179-29354198 | MS.gene52130:intron | 15.0% |
!! | AAACAAAATTACATATCAAC+TGG | + | chr4.1:29351208-29351227 | None:intergenic | 20.0% |
!! | AACAATCACTTAATTTATCA+TGG | - | chr4.1:29354281-29354300 | MS.gene52130:intron | 20.0% |
!! | AACATATTTCCAAATTTATC+TGG | - | chr4.1:29351082-29351101 | MS.gene52130:intron | 20.0% |
!! | AATTAATTAAGAATCTTGCT+GGG | - | chr4.1:29353532-29353551 | MS.gene52130:CDS | 20.0% |
!! | AATTTGGAAATATGTTAAAC+AGG | + | chr4.1:29351078-29351097 | None:intergenic | 20.0% |
!! | GTAAATAATATACAAAACCA+TGG | + | chr4.1:29354072-29354091 | None:intergenic | 20.0% |
!! | TAATTAATTAAGAATCTTGC+TGG | - | chr4.1:29353531-29353550 | MS.gene52130:CDS | 20.0% |
!! | TATCATCAAAATACCATAAA+TGG | + | chr4.1:29351657-29351676 | None:intergenic | 20.0% |
!! | TTCAATCCTTAAACTTTATT+GGG | + | chr4.1:29352890-29352909 | None:intergenic | 20.0% |
!!! | AAGAGTTTTAGATATTGAAA+TGG | + | chr4.1:29351904-29351923 | None:intergenic | 20.0% |
!!! | AGGTACACAAATTTTATTTT+GGG | + | chr4.1:29350305-29350324 | None:intergenic | 20.0% |
!!! | AGTGATTTTATATCTGTAAA+GGG | - | chr4.1:29351173-29351192 | MS.gene52130:intron | 20.0% |
!!! | AGTTTGAGATTATATTTCTA+GGG | + | chr4.1:29348746-29348765 | None:intergenic | 20.0% |
!!! | ATGTTTTGATCATTATATGT+CGG | - | chr4.1:29354441-29354460 | MS.gene52130:intron | 20.0% |
!!! | ATTTATGTTACATATTTTGG+TGG | - | chr4.1:29349503-29349522 | MS.gene52130:intron | 20.0% |
!!! | ATTTTCTATTTATCAGCTTA+TGG | - | chr4.1:29352714-29352733 | MS.gene52130:intron | 20.0% |
!!! | CGTATTTATGTTACATATTT+TGG | - | chr4.1:29349500-29349519 | MS.gene52130:intron | 20.0% |
!!! | TAGAAAGCATAATAAAACTA+AGG | + | chr4.1:29351696-29351715 | None:intergenic | 20.0% |
!!! | TAGTGATTTTATATCTGTAA+AGG | - | chr4.1:29351172-29351191 | MS.gene52130:intron | 20.0% |
!!! | TAGTTTCCTTTAGAATTATA+TGG | - | chr4.1:29351050-29351069 | MS.gene52130:intron | 20.0% |
!!! | TATAGTGAATACTTTTTTTG+CGG | + | chr4.1:29354008-29354027 | None:intergenic | 20.0% |
!!! | TATTATGCTTTCTATTTTGA+AGG | - | chr4.1:29351702-29351721 | MS.gene52130:intron | 20.0% |
!!! | TCTGGTTTTAGAAATATATA+TGG | + | chr4.1:29350699-29350718 | None:intergenic | 20.0% |
!!! | TGATTCTTTTATTGATTTGT+TGG | - | chr4.1:29352302-29352321 | MS.gene52130:intron | 20.0% |
! | AAAAAAAGTCATTGATCAGA+AGG | - | chr4.1:29353494-29353513 | MS.gene52130:CDS | 25.0% |
! | AAAATACCTGAATAAAGACA+AGG | + | chr4.1:29350234-29350253 | None:intergenic | 25.0% |
! | AAACATACTTTACTACCAAA+AGG | + | chr4.1:29349608-29349627 | None:intergenic | 25.0% |
! | AAATGATTCATTGAAAATCG+TGG | + | chr4.1:29351109-29351128 | None:intergenic | 25.0% |
! | AAATGGCATGATATATGAAA+TGG | + | chr4.1:29353971-29353990 | None:intergenic | 25.0% |
! | AACAGATAATTATGTTGAGA+AGG | + | chr4.1:29352961-29352980 | None:intergenic | 25.0% |
! | AACCTATAAAACATCTTCAA+CGG | + | chr4.1:29349778-29349797 | None:intergenic | 25.0% |
! | AAGAATCTGCAAAATATAAC+TGG | + | chr4.1:29348685-29348704 | None:intergenic | 25.0% |
! | AATGAAATGCCTATGAATAA+AGG | - | chr4.1:29352349-29352368 | MS.gene52130:intron | 25.0% |
! | ACAGATAATTATGTTGAGAA+GGG | + | chr4.1:29352960-29352979 | None:intergenic | 25.0% |
! | AGTAAACAAAATACCTTCTT+TGG | + | chr4.1:29352820-29352839 | None:intergenic | 25.0% |
! | AGTGAACTTAATAACAATTC+TGG | + | chr4.1:29353056-29353075 | None:intergenic | 25.0% |
! | ATATAAGATACATACTTCAC+GGG | + | chr4.1:29350466-29350485 | None:intergenic | 25.0% |
! | CATATAAGATACATACTTCA+CGG | + | chr4.1:29350467-29350486 | None:intergenic | 25.0% |
! | CATCAGAAAATTTAACAAAG+CGG | - | chr4.1:29352397-29352416 | MS.gene52130:intron | 25.0% |
! | GACAAGAAAAAAAACGAAAT+CGG | + | chr4.1:29352937-29352956 | None:intergenic | 25.0% |
! | GTTCAATCCTTAAACTTTAT+TGG | + | chr4.1:29352891-29352910 | None:intergenic | 25.0% |
! | TAAGTGATAATTAGAGTCAT+TGG | + | chr4.1:29353936-29353955 | None:intergenic | 25.0% |
! | TACATTTGTCTCTTGATTAT+AGG | - | chr4.1:29352563-29352582 | MS.gene52130:CDS | 25.0% |
! | TATATTTGATCAAAATGCCA+TGG | - | chr4.1:29354052-29354071 | MS.gene52130:CDS | 25.0% |
! | TATCTTCACAAATTTATGTC+TGG | + | chr4.1:29352010-29352029 | None:intergenic | 25.0% |
! | TGGTAAGAAAGATTTAGATA+TGG | + | chr4.1:29351864-29351883 | None:intergenic | 25.0% |
! | TGGTTGAATGAAAAACAATA+AGG | + | chr4.1:29348665-29348684 | None:intergenic | 25.0% |
! | TGTTGAGTGAATATACAAAA+GGG | + | chr4.1:29351024-29351043 | None:intergenic | 25.0% |
!! | ATACTTAGTATTTTGTCAGT+AGG | - | chr4.1:29350764-29350783 | MS.gene52130:intron | 25.0% |
!! | ATCTTTTGTGTTTACATTGT+AGG | - | chr4.1:29349457-29349476 | MS.gene52130:intron | 25.0% |
!! | CAGTTTGAGATTATATTTCT+AGG | + | chr4.1:29348747-29348766 | None:intergenic | 25.0% |
!! | GTTATATTTTGCAGATTCTT+AGG | - | chr4.1:29348685-29348704 | MS.gene52130:intron | 25.0% |
!! | TATTGACATACTTTCCTTTT+GGG | - | chr4.1:29351403-29351422 | MS.gene52130:intron | 25.0% |
!! | TATTTTGCTTATGGTTGTTT+GGG | - | chr4.1:29350925-29350944 | MS.gene52130:CDS | 25.0% |
!! | TGTTGGTAAAATCATTATGA+AGG | - | chr4.1:29349194-29349213 | MS.gene52130:CDS | 25.0% |
!! | TTATTGACATACTTTCCTTT+TGG | - | chr4.1:29351402-29351421 | MS.gene52130:intron | 25.0% |
!! | TTCATATATCATGCCATTTA+AGG | - | chr4.1:29353972-29353991 | MS.gene52130:CDS | 25.0% |
!! | TTGAATGCATAATATGCTTT+TGG | - | chr4.1:29353594-29353613 | MS.gene52130:CDS | 25.0% |
!!! | ACACAAATTTTATTTTGGGT+GGG | + | chr4.1:29350301-29350320 | None:intergenic | 25.0% |
!!! | ACTATGGTTATTCTGTTTTT+AGG | - | chr4.1:29349281-29349300 | MS.gene52130:CDS | 25.0% |
!!! | CAACTTTTTCTTTTAAACCA+AGG | + | chr4.1:29349229-29349248 | None:intergenic | 25.0% |
!!! | CAGAAGTATGTTTTATCAAT+TGG | - | chr4.1:29349142-29349161 | MS.gene52130:intron | 25.0% |
!!! | CAGGTACACAAATTTTATTT+TGG | + | chr4.1:29350306-29350325 | None:intergenic | 25.0% |
!!! | GAAATACATTTTGATAGAGT+TGG | - | chr4.1:29350148-29350167 | MS.gene52130:intron | 25.0% |
!!! | TACACAAATTTTATTTTGGG+TGG | + | chr4.1:29350302-29350321 | None:intergenic | 25.0% |
!!! | TAGTTTAGTAGTTTTGTGAT+GGG | - | chr4.1:29352522-29352541 | MS.gene52130:CDS | 25.0% |
!!! | TCTAATTTGGTGTTTATCTT+TGG | - | chr4.1:29350073-29350092 | MS.gene52130:intron | 25.0% |
!!! | TCTAGCTCTCTTTAAAATTT+AGG | - | chr4.1:29351624-29351643 | MS.gene52130:intron | 25.0% |
!!! | TTAGTTTAGTAGTTTTGTGA+TGG | - | chr4.1:29352521-29352540 | MS.gene52130:CDS | 25.0% |
!!! | TTATTTTGCTTATGGTTGTT+TGG | - | chr4.1:29350924-29350943 | MS.gene52130:CDS | 25.0% |
!!! | TTCTATTTTGAAGGTAATGT+TGG | - | chr4.1:29351711-29351730 | MS.gene52130:intron | 25.0% |
!!! | TTCTTTAAAGTAGTCGTTAA+AGG | + | chr4.1:29349091-29349110 | None:intergenic | 25.0% |
AAACATTCCTAAGATGCTTA+TGG | + | chr4.1:29354427-29354446 | None:intergenic | 30.0% | |
AAGTTATAAGTTACAACTGC+TGG | + | chr4.1:29350990-29351009 | None:intergenic | 30.0% | |
AATCCTTAAACTTTATTGGG+TGG | + | chr4.1:29352887-29352906 | None:intergenic | 30.0% | |
AATTAGGAAGATGATTCAAG+TGG | - | chr4.1:29352144-29352163 | MS.gene52130:intron | 30.0% | |
AATTTGTGTACCTGATAAGT+TGG | - | chr4.1:29350312-29350331 | MS.gene52130:CDS | 30.0% | |
ACAATGAAGCTAGAGATATA+TGG | - | chr4.1:29349552-29349571 | MS.gene52130:intron | 30.0% | |
ATATCTTCAAATGCAGAAGT+TGG | - | chr4.1:29349321-29349340 | MS.gene52130:CDS | 30.0% | |
ATATTAAACTAGACCAGAGT+TGG | + | chr4.1:29350836-29350855 | None:intergenic | 30.0% | |
ATCCTTAAACTTTATTGGGT+GGG | + | chr4.1:29352886-29352905 | None:intergenic | 30.0% | |
ATTCAACTCAACAAATAACG+AGG | + | chr4.1:29353580-29353599 | None:intergenic | 30.0% | |
CAGATAATTATGTTGAGAAG+GGG | + | chr4.1:29352959-29352978 | None:intergenic | 30.0% | |
CAGATATAATACCTGAGATA+GGG | + | chr4.1:29353180-29353199 | None:intergenic | 30.0% | |
CTGAATTGGCAAATCTAATT+TGG | - | chr4.1:29350060-29350079 | MS.gene52130:intron | 30.0% | |
CTGTTGAGTGAATATACAAA+AGG | + | chr4.1:29351025-29351044 | None:intergenic | 30.0% | |
GACAGAAAATATAATTGCCA+AGG | + | chr4.1:29353682-29353701 | None:intergenic | 30.0% | |
GTGAAGAAGAAATAGAAGAA+GGG | - | chr4.1:29350877-29350896 | MS.gene52130:intron | 30.0% | |
TATAAGATACATACTTCACG+GGG | + | chr4.1:29350465-29350484 | None:intergenic | 30.0% | |
TATTAAACTAGACCAGAGTT+GGG | + | chr4.1:29350835-29350854 | None:intergenic | 30.0% | |
TGTGAAGAAGAAATAGAAGA+AGG | - | chr4.1:29350876-29350895 | MS.gene52130:intron | 30.0% | |
TGTTGATATCATTGTATGTC+CGG | - | chr4.1:29353628-29353647 | MS.gene52130:intron | 30.0% | |
! | ACAGGTTTTCCTTTATTCAT+AGG | + | chr4.1:29352361-29352380 | None:intergenic | 30.0% |
! | ACATGCATGAAGACATTTTA+TGG | - | chr4.1:29352209-29352228 | MS.gene52130:intron | 30.0% |
! | ATTGACATACTTTCCTTTTG+GGG | - | chr4.1:29351404-29351423 | MS.gene52130:intron | 30.0% |
! | ATTTTTATGCTGCAGTATAG+AGG | + | chr4.1:29350590-29350609 | None:intergenic | 30.0% |
! | CATGCATGAAGACATTTTAT+GGG | - | chr4.1:29352210-29352229 | MS.gene52130:intron | 30.0% |
! | CTCTTTTTGAATTACGTTGT+TGG | - | chr4.1:29349177-29349196 | MS.gene52130:intron | 30.0% |
! | GAAAGCACAACAATCAAAAA+CGG | + | chr4.1:29353254-29353273 | None:intergenic | 30.0% |
! | GAGTTGTTCAATTTTCTTCT+TGG | - | chr4.1:29348795-29348814 | MS.gene52130:intron | 30.0% |
! | TATACAAAAGGGATTAGTAC+AGG | + | chr4.1:29351013-29351032 | None:intergenic | 30.0% |
! | TTTACTTCAGTGTACCTTTT+AGG | - | chr4.1:29352834-29352853 | MS.gene52130:intron | 30.0% |
! | TTTAGGATATCTGCCATTTA+TGG | - | chr4.1:29351641-29351660 | MS.gene52130:intron | 30.0% |
! | TTTCAGCAGAAACTTGTTTA+AGG | - | chr4.1:29352177-29352196 | MS.gene52130:intron | 30.0% |
! | TTTTCCTGTAACTCATTTAC+AGG | - | chr4.1:29351225-29351244 | MS.gene52130:intron | 30.0% |
!! | AAATTGTTTCTGGACTGAAT+TGG | - | chr4.1:29350046-29350065 | MS.gene52130:intron | 30.0% |
!! | AAGGAATTTTGACACCTAAA+AGG | + | chr4.1:29352851-29352870 | None:intergenic | 30.0% |
!! | AGCTTTACGTTTGTTTTCTT+CGG | + | chr4.1:29353367-29353386 | None:intergenic | 30.0% |
!! | GATTCTAAAACCAACTTATC+AGG | + | chr4.1:29350325-29350344 | None:intergenic | 30.0% |
!! | TTTGGTGTTTATCTTTGGAT+AGG | - | chr4.1:29350078-29350097 | MS.gene52130:intron | 30.0% |
!!! | AGTTCAAGCCAATTTTTTTG+GGG | - | chr4.1:29348917-29348936 | MS.gene52130:intron | 30.0% |
!!! | CACAAATTTTATTTTGGGTG+GGG | + | chr4.1:29350300-29350319 | None:intergenic | 30.0% |
!!! | CAGTTCAAGCCAATTTTTTT+GGG | - | chr4.1:29348916-29348935 | MS.gene52130:intron | 30.0% |
!!! | TCAGTTCAAGCCAATTTTTT+TGG | - | chr4.1:29348915-29348934 | MS.gene52130:intron | 30.0% |
!!! | TCTTGTCTTGTTTGTGATTT+TGG | - | chr4.1:29348882-29348901 | MS.gene52130:intron | 30.0% |
!!! | TTTTATGGGTTGTCACTTTT+TGG | - | chr4.1:29352224-29352243 | MS.gene52130:intron | 30.0% |
AACAAAGTGAAGAGCGAATT+AGG | - | chr4.1:29352128-29352147 | MS.gene52130:intron | 35.0% | |
AACCCACCCAATAAAGTTTA+AGG | - | chr4.1:29352881-29352900 | MS.gene52130:CDS | 35.0% | |
AAGAAGAAATAGAAGAAGGG+AGG | - | chr4.1:29350880-29350899 | MS.gene52130:intron | 35.0% | |
AAGAGAAGAATCATGTCCAT+TGG | - | chr4.1:29348548-29348567 | MS.gene52130:intron | 35.0% | |
AATCGTGGTCCAGATAAATT+TGG | + | chr4.1:29351094-29351113 | None:intergenic | 35.0% | |
AGAAAGGGCAAGAAAGAATA+AGG | - | chr4.1:29354194-29354213 | MS.gene52130:intron | 35.0% | |
AGAAGAAATAGAAGAAGGGA+GGG | - | chr4.1:29350881-29350900 | MS.gene52130:intron | 35.0% | |
ATAAAGTTGACATGGCATAC+AGG | - | chr4.1:29351296-29351315 | MS.gene52130:CDS | 35.0% | |
ATAGTTCATAAATTCGGCAC+AGG | + | chr4.1:29349822-29349841 | None:intergenic | 35.0% | |
ATATCGCACAATTCAAGACT+AGG | + | chr4.1:29350728-29350747 | None:intergenic | 35.0% | |
ATGGAACCTTGTCTTTATTC+AGG | - | chr4.1:29350225-29350244 | MS.gene52130:intron | 35.0% | |
CAATCAAAAACGGACAAAAG+TGG | + | chr4.1:29353244-29353263 | None:intergenic | 35.0% | |
CAGGAGCCATATAATTCTAA+AGG | + | chr4.1:29351059-29351078 | None:intergenic | 35.0% | |
CCAGATATAATACCTGAGAT+AGG | + | chr4.1:29353181-29353200 | None:intergenic | 35.0% | |
CCTATCTCAGGTATTATATC+TGG | - | chr4.1:29353178-29353197 | MS.gene52130:intron | 35.0% | |
CTACCTGTGTAAGATCTAAT+GGG | + | chr4.1:29352620-29352639 | None:intergenic | 35.0% | |
CTTATTAACATTGTCACTGC+TGG | - | chr4.1:29349850-29349869 | MS.gene52130:intron | 35.0% | |
CTTTGGATAGGACAATTTCT+GGG | - | chr4.1:29350090-29350109 | MS.gene52130:intron | 35.0% | |
GAAATTTCTGAATCCCCAAA+AGG | + | chr4.1:29351420-29351439 | None:intergenic | 35.0% | |
GATATCAACCAAACACATCT+AGG | + | chr4.1:29354503-29354522 | None:intergenic | 35.0% | |
GTAACATAAATACGATCCGA+CGG | + | chr4.1:29349494-29349513 | None:intergenic | 35.0% | |
GTAGGTGTATAAATTACCGT+CGG | - | chr4.1:29349475-29349494 | MS.gene52130:intron | 35.0% | |
TAAAGAAGAAGCCATTAGCT+GGG | - | chr4.1:29349104-29349123 | MS.gene52130:intron | 35.0% | |
TAAAGTTGACATGGCATACA+GGG | - | chr4.1:29351297-29351316 | MS.gene52130:CDS | 35.0% | |
TAACATAAGTGCCTAATAGG+AGG | + | chr4.1:29350790-29350809 | None:intergenic | 35.0% | |
TAATGGGAACCCAAATGTAT+CGG | + | chr4.1:29352604-29352623 | None:intergenic | 35.0% | |
TATCATGGTCACCTACTTTA+GGG | - | chr4.1:29354296-29354315 | MS.gene52130:intron | 35.0% | |
TCAAAATGTATTTCCGAGCA+AGG | + | chr4.1:29350142-29350161 | None:intergenic | 35.0% | |
TCAACAGTCCCCAAAAAAAT+TGG | + | chr4.1:29348928-29348947 | None:intergenic | 35.0% | |
TCATCAACCATAAGCATCTT+AGG | - | chr4.1:29354417-29354436 | MS.gene52130:intron | 35.0% | |
TCCTATTAGGCACTTATGTT+AGG | - | chr4.1:29350789-29350808 | MS.gene52130:intron | 35.0% | |
TCTAATGATAACTACCGAGA+AGG | - | chr4.1:29353386-29353405 | MS.gene52130:intron | 35.0% | |
TCTTTGGATAGGACAATTTC+TGG | - | chr4.1:29350089-29350108 | MS.gene52130:intron | 35.0% | |
TTAAAGAAGAAGCCATTAGC+TGG | - | chr4.1:29349103-29349122 | MS.gene52130:intron | 35.0% | |
TTACCTTTATCTCCTTTCTC+CGG | + | chr4.1:29353813-29353832 | None:intergenic | 35.0% | |
TTAGAATCCATTGTTCTAGC+AGG | - | chr4.1:29350337-29350356 | MS.gene52130:CDS | 35.0% | |
TTATCATGGTCACCTACTTT+AGG | - | chr4.1:29354295-29354314 | MS.gene52130:intron | 35.0% | |
TTCAAGACTAGGTATGATTC+TGG | + | chr4.1:29350717-29350736 | None:intergenic | 35.0% | |
! | AGCAATGTTTGCTGATAAAC+AGG | - | chr4.1:29353722-29353741 | MS.gene52130:intron | 35.0% |
! | AGCCGTTGAAGATGTTTTAT+AGG | - | chr4.1:29349773-29349792 | MS.gene52130:intron | 35.0% |
! | ATATCTCTAGCTTCATTGTC+AGG | + | chr4.1:29349551-29349570 | None:intergenic | 35.0% |
! | GCAATGTTTGCTGATAAACA+GGG | - | chr4.1:29353723-29353742 | MS.gene52130:intron | 35.0% |
! | TATCTCTAGCTTCATTGTCA+GGG | + | chr4.1:29349550-29349569 | None:intergenic | 35.0% |
! | TCTTGCTGTGAAATTTGCAT+CGG | - | chr4.1:29354591-29354610 | MS.gene52130:CDS | 35.0% |
! | TGTTAAATTTTCTGATGCCC+TGG | + | chr4.1:29352394-29352413 | None:intergenic | 35.0% |
! | TTATATGTCGGCTGTTTATG+AGG | - | chr4.1:29354453-29354472 | MS.gene52130:intron | 35.0% |
! | TTGAGTTGTCCGATACATTT+GGG | - | chr4.1:29352592-29352611 | MS.gene52130:intron | 35.0% |
!! | TCTTGTTTGTGATTTTGGCA+GGG | - | chr4.1:29348887-29348906 | MS.gene52130:intron | 35.0% |
!! | TTTGAGTTGTCCGATACATT+TGG | - | chr4.1:29352591-29352610 | MS.gene52130:intron | 35.0% |
!!! | AAACCTGTTTTTACTTCTCC+AGG | - | chr4.1:29352373-29352392 | MS.gene52130:intron | 35.0% |
!!! | AACCTGTTTTTACTTCTCCA+GGG | - | chr4.1:29352374-29352393 | MS.gene52130:intron | 35.0% |
!!! | CTCTTCACTTTGTTTTAGCT+CGG | + | chr4.1:29352122-29352141 | None:intergenic | 35.0% |
!!! | CTGAAGAGGGTTTTTTCAAT+GGG | - | chr4.1:29351799-29351818 | MS.gene52130:CDS | 35.0% |
!!! | GGTATTTTGATGATAGAGAG+AGG | - | chr4.1:29351662-29351681 | MS.gene52130:intron | 35.0% |
!!! | TCTTCACTTTGTTTTAGCTC+GGG | + | chr4.1:29352121-29352140 | None:intergenic | 35.0% |
AAAACGGACAAAAGTGGAAC+AGG | + | chr4.1:29353238-29353257 | None:intergenic | 40.0% | |
AAACGGACAAAAGTGGAACA+GGG | + | chr4.1:29353237-29353256 | None:intergenic | 40.0% | |
AAACTAAAAGTCGACGTCGA+AGG | - | chr4.1:29352748-29352767 | MS.gene52130:intron | 40.0% | |
AAAGCGGTTGAACATGTTCA+GGG | - | chr4.1:29352413-29352432 | MS.gene52130:intron | 40.0% | |
AAATGGCAGAAAAGGATGCT+AGG | + | chr4.1:29349739-29349758 | None:intergenic | 40.0% | |
AAGTTTGCCTGCTAGAACAA+TGG | + | chr4.1:29350347-29350366 | None:intergenic | 40.0% | |
AATGGCTGAGTAATGCTTTG+GGG | - | chr4.1:29353847-29353866 | MS.gene52130:intron | 40.0% | |
ACAATGATCTTGACGATGTG+GGG | - | chr4.1:29349019-29349038 | MS.gene52130:intron | 40.0% | |
ACGAAACTTTCTGTGACAGA+AGG | + | chr4.1:29353088-29353107 | None:intergenic | 40.0% | |
AGAATGGCTGAGTAATGCTT+TGG | - | chr4.1:29353845-29353864 | MS.gene52130:intron | 40.0% | |
AGATGCATCACACCTAAATG+AGG | - | chr4.1:29354561-29354580 | MS.gene52130:CDS | 40.0% | |
AGATGTGGTAAAGGAAAAGG+AGG | - | chr4.1:29353882-29353901 | MS.gene52130:intron | 40.0% | |
ATAATTGCCAAGGACGCATA+TGG | + | chr4.1:29353672-29353691 | None:intergenic | 40.0% | |
ATCACACCTAAATGAGGCTA+TGG | - | chr4.1:29354567-29354586 | MS.gene52130:CDS | 40.0% | |
ATGTGTTTGCCCAAAGTCTT+CGG | - | chr4.1:29354358-29354377 | MS.gene52130:intron | 40.0% | |
CAAGTCTACAATATCCTACC+AGG | + | chr4.1:29351376-29351395 | None:intergenic | 40.0% | |
CACAATGATCTTGACGATGT+GGG | - | chr4.1:29349018-29349037 | MS.gene52130:intron | 40.0% | |
CAGAGTTGGGACATCTATAA+TGG | + | chr4.1:29350822-29350841 | None:intergenic | 40.0% | |
CATTATAGATGTCCCAACTC+TGG | - | chr4.1:29350820-29350839 | MS.gene52130:intron | 40.0% | |
CCATTAGATCTTACACAGGT+AGG | - | chr4.1:29352618-29352637 | MS.gene52130:intron | 40.0% | |
CCTACCTGTGTAAGATCTAA+TGG | + | chr4.1:29352621-29352640 | None:intergenic | 40.0% | |
CGAAACTTTCTGTGACAGAA+GGG | + | chr4.1:29353087-29353106 | None:intergenic | 40.0% | |
CTGGAATAACTTTGCATTGC+AGG | - | chr4.1:29353197-29353216 | MS.gene52130:intron | 40.0% | |
CTGGTAGGATATTGTAGACT+TGG | - | chr4.1:29351374-29351393 | MS.gene52130:intron | 40.0% | |
GAAAGGAGATAAAGGTAAGC+TGG | - | chr4.1:29353815-29353834 | MS.gene52130:intron | 40.0% | |
GAATGGCTGAGTAATGCTTT+GGG | - | chr4.1:29353846-29353865 | MS.gene52130:intron | 40.0% | |
GAGGTCATTCAATGAAATGC+TGG | + | chr4.1:29353561-29353580 | None:intergenic | 40.0% | |
GCCTAACATAAGTGCCTAAT+AGG | + | chr4.1:29350793-29350812 | None:intergenic | 40.0% | |
GGATGCAGATAAAGTTGACA+TGG | - | chr4.1:29351288-29351307 | MS.gene52130:CDS | 40.0% | |
GTAACTCATTTACAGGCAAC+TGG | - | chr4.1:29351232-29351251 | MS.gene52130:intron | 40.0% | |
GTAAGCTGGATGTATCAGAA+TGG | - | chr4.1:29353829-29353848 | MS.gene52130:intron | 40.0% | |
GTAGATGTCTCTATCTGCTA+AGG | + | chr4.1:29353026-29353045 | None:intergenic | 40.0% | |
GTCAAAAACTGCTCCAAAGA+AGG | - | chr4.1:29352804-29352823 | MS.gene52130:intron | 40.0% | |
GTTCAGGGAAATATACTGAG+CGG | - | chr4.1:29352428-29352447 | MS.gene52130:intron | 40.0% | |
GTTCCCATTAGATCTTACAC+AGG | - | chr4.1:29352614-29352633 | MS.gene52130:intron | 40.0% | |
GTTGCCTGTAAATGAGTTAC+AGG | + | chr4.1:29351232-29351251 | None:intergenic | 40.0% | |
TAAACAGGGATTGTCAGTGA+TGG | - | chr4.1:29353737-29353756 | MS.gene52130:intron | 40.0% | |
TAGCTATCTCCGAAGACTTT+GGG | + | chr4.1:29354370-29354389 | None:intergenic | 40.0% | |
TAGGAAGATGATTCAAGTGG+AGG | - | chr4.1:29352147-29352166 | MS.gene52130:intron | 40.0% | |
TATCTTCGATGCTATTCAGC+AGG | - | chr4.1:29350639-29350658 | MS.gene52130:intron | 40.0% | |
TCAACTTTATCTGCATCCTC+TGG | + | chr4.1:29351286-29351305 | None:intergenic | 40.0% | |
TCACACCTAAATGAGGCTAT+GGG | - | chr4.1:29354568-29354587 | MS.gene52130:CDS | 40.0% | |
TCCATATCTCCATGCAGTTA+GGG | + | chr4.1:29350210-29350229 | None:intergenic | 40.0% | |
TGCATATCTCACGTTGATGT+TGG | - | chr4.1:29353441-29353460 | MS.gene52130:intron | 40.0% | |
TGTCTCACCACAGTTCAATA+GGG | - | chr4.1:29350495-29350514 | MS.gene52130:CDS | 40.0% | |
TTAAAGAGAGCTAGAGTACG+TGG | + | chr4.1:29351619-29351638 | None:intergenic | 40.0% | |
TTCAGGGAAATATACTGAGC+GGG | - | chr4.1:29352429-29352448 | MS.gene52130:intron | 40.0% | |
TTCCATATCTCCATGCAGTT+AGG | + | chr4.1:29350211-29350230 | None:intergenic | 40.0% | |
TTGTCTCACCACAGTTCAAT+AGG | - | chr4.1:29350494-29350513 | MS.gene52130:CDS | 40.0% | |
! | ATAGGACAATTTCTGGGAGA+TGG | - | chr4.1:29350096-29350115 | MS.gene52130:intron | 40.0% |
! | ATTCAGGCTTGTAAGTGTTG+TGG | - | chr4.1:29352072-29352091 | MS.gene52130:intron | 40.0% |
! | ATTTAGCGTCTGAAACAGCT+AGG | + | chr4.1:29353416-29353435 | None:intergenic | 40.0% |
! | GCAGAAACTTGTTTAAGGTG+AGG | - | chr4.1:29352182-29352201 | MS.gene52130:intron | 40.0% |
! | TAGGACAATTTCTGGGAGAT+GGG | - | chr4.1:29350097-29350116 | MS.gene52130:intron | 40.0% |
! | TGCTGAATAGCATCGAAGAT+AGG | + | chr4.1:29350640-29350659 | None:intergenic | 40.0% |
! | TGGTTAAAGTTTTTGCCTCC+TGG | - | chr4.1:29349572-29349591 | MS.gene52130:intron | 40.0% |
! | TGTGTTTCTGTCGTCAATCT+CGG | - | chr4.1:29352046-29352065 | MS.gene52130:intron | 40.0% |
! | TTCGTCTCTGAAAAGCAACA+TGG | - | chr4.1:29353103-29353122 | MS.gene52130:intron | 40.0% |
! | TTTTCAATGGGTGGGTACAA+TGG | - | chr4.1:29351811-29351830 | MS.gene52130:CDS | 40.0% |
!! | TTTGGTGGTGATGAGAAAAC+TGG | - | chr4.1:29349518-29349537 | MS.gene52130:intron | 40.0% |
!!! | AAGAGGGTTTTTTCAATGGG+TGG | - | chr4.1:29351802-29351821 | MS.gene52130:CDS | 40.0% |
!!! | AGAGGGTTTTTTCAATGGGT+GGG | - | chr4.1:29351803-29351822 | MS.gene52130:CDS | 40.0% |
!!! | CTTCACTTTGTTTTAGCTCG+GGG | + | chr4.1:29352120-29352139 | None:intergenic | 40.0% |
!!! | GCTGAAGAGGGTTTTTTCAA+TGG | - | chr4.1:29351798-29351817 | MS.gene52130:CDS | 40.0% |
!!! | GTCTTGTTTGTGATTTTGGC+AGG | - | chr4.1:29348886-29348905 | MS.gene52130:intron | 40.0% |
!!! | TATGAAGGTGTTTTGTGCCT+TGG | - | chr4.1:29349209-29349228 | MS.gene52130:CDS | 40.0% |
AACAAAGCTGTAGTGTGTGC+TGG | - | chr4.1:29353783-29353802 | MS.gene52130:intron | 45.0% | |
AACGGACAAAAGTGGAACAG+GGG | + | chr4.1:29353236-29353255 | None:intergenic | 45.0% | |
ACAAAGCTGTAGTGTGTGCT+GGG | - | chr4.1:29353784-29353803 | MS.gene52130:intron | 45.0% | |
ACCCTAACTGCATGGAGATA+TGG | - | chr4.1:29350206-29350225 | MS.gene52130:intron | 45.0% | |
AGAGAAATGATCCCAGCACT+TGG | + | chr4.1:29349942-29349961 | None:intergenic | 45.0% | |
AGAGAAGATCGAGTAGCTAC+CGG | + | chr4.1:29348626-29348645 | None:intergenic | 45.0% | |
AGAGGGGAAAATGGCAGAAA+AGG | + | chr4.1:29349747-29349766 | None:intergenic | 45.0% | |
AGATGGCTGTCATTGTGTCA+CGG | + | chr4.1:29352253-29352272 | None:intergenic | 45.0% | |
AGGAAAAGGAGGTCTTGCAA+CGG | - | chr4.1:29353893-29353912 | MS.gene52130:intron | 45.0% | |
AGGTTGAGATCCATCAGCAA+TGG | + | chr4.1:29351356-29351375 | None:intergenic | 45.0% | |
AGTGTTGTGGCAAATGTGCT+GGG | - | chr4.1:29352085-29352104 | MS.gene52130:intron | 45.0% | |
ATTGAAATGGCACTGTGACG+TGG | + | chr4.1:29351891-29351910 | None:intergenic | 45.0% | |
ATTTACAGGCAACTGGTGCT+CGG | - | chr4.1:29351239-29351258 | MS.gene52130:intron | 45.0% | |
CAAAGCGGTTGAACATGTTC+AGG | - | chr4.1:29352412-29352431 | MS.gene52130:intron | 45.0% | |
CAAGACCCATAGCCTCATTT+AGG | + | chr4.1:29354576-29354595 | None:intergenic | 45.0% | |
CGGATGTGCACTACCTTAAA+TGG | + | chr4.1:29353988-29354007 | None:intergenic | 45.0% | |
CGTTAGCAAAGAGCAGAGTA+GGG | + | chr4.1:29348603-29348622 | None:intergenic | 45.0% | |
CTAGCTATCTCCGAAGACTT+TGG | + | chr4.1:29354371-29354390 | None:intergenic | 45.0% | |
CTCAAGACATGAAGGCAAGA+AGG | + | chr4.1:29351453-29351472 | None:intergenic | 45.0% | |
CTGAAAGGGAGATGTGGTAA+AGG | - | chr4.1:29353873-29353892 | MS.gene52130:intron | 45.0% | |
CTGAGTCACTTGACATTGAG+TGG | - | chr4.1:29348485-29348504 | MS.gene52130:CDS | 45.0% | |
CTGTCAATTGCCATTGCTGA+TGG | - | chr4.1:29351343-29351362 | MS.gene52130:CDS | 45.0% | |
CTGTCTGTCCTAGATGTGTT+TGG | - | chr4.1:29354492-29354511 | MS.gene52130:CDS | 45.0% | |
CTTCAACGGCTGAAAACAGA+GGG | + | chr4.1:29349764-29349783 | None:intergenic | 45.0% | |
CTTCTTGCCTTCATGTCTTG+AGG | - | chr4.1:29351451-29351470 | MS.gene52130:intron | 45.0% | |
GAAGATGATTCAAGTGGAGG+AGG | - | chr4.1:29352150-29352169 | MS.gene52130:intron | 45.0% | |
GATCGTGATAACCCTATCTC+AGG | - | chr4.1:29353166-29353185 | MS.gene52130:intron | 45.0% | |
GCAAACTCAGAGAGATTGTC+CGG | + | chr4.1:29353650-29353669 | None:intergenic | 45.0% | |
GCACAATGATCTTGACGATG+TGG | - | chr4.1:29349017-29349036 | MS.gene52130:intron | 45.0% | |
GCTGAAAACAGAGGGGAAAA+TGG | + | chr4.1:29349756-29349775 | None:intergenic | 45.0% | |
GGGAGATGTGGTAAAGGAAA+AGG | - | chr4.1:29353879-29353898 | MS.gene52130:intron | 45.0% | |
TACAACCCTGTCTGTGAAGA+AGG | + | chr4.1:29351483-29351502 | None:intergenic | 45.0% | |
TACAACTGCTGGAAACTCCT+AGG | + | chr4.1:29350979-29350998 | None:intergenic | 45.0% | |
TAGGCACTTATGTTAGGCTC+AGG | - | chr4.1:29350795-29350814 | MS.gene52130:intron | 45.0% | |
TCAGGGAAATATACTGAGCG+GGG | - | chr4.1:29352430-29352449 | MS.gene52130:intron | 45.0% | |
TCGATGCTATTCAGCAGGTA+TGG | - | chr4.1:29350644-29350663 | MS.gene52130:intron | 45.0% | |
TCGTCAATCTCGGTGAATTC+AGG | - | chr4.1:29352056-29352075 | MS.gene52130:intron | 45.0% | |
TCTTCAACGGCTGAAAACAG+AGG | + | chr4.1:29349765-29349784 | None:intergenic | 45.0% | |
TGCCCTGGAGAAGTAAAAAC+AGG | + | chr4.1:29352379-29352398 | None:intergenic | 45.0% | |
TTACAAAAGATGCAGCGTCG+CGG | + | chr4.1:29350177-29350196 | None:intergenic | 45.0% | |
TTACCACATCTCCCTTTCAG+TGG | + | chr4.1:29353873-29353892 | None:intergenic | 45.0% | |
TTCAACGGCTGAAAACAGAG+GGG | + | chr4.1:29349763-29349782 | None:intergenic | 45.0% | |
TTCAGCAGGTATGGTTGTGA+AGG | - | chr4.1:29350653-29350672 | MS.gene52130:CDS | 45.0% | |
TTCCTTGTGCATCTCCACAA+AGG | + | chr4.1:29351507-29351526 | None:intergenic | 45.0% | |
TTGAAATGGCACTGTGACGT+GGG | + | chr4.1:29351890-29351909 | None:intergenic | 45.0% | |
TTGCCTTCATGTCTTGAGGA+AGG | - | chr4.1:29351455-29351474 | MS.gene52130:intron | 45.0% | |
TTGGTCGTGAGTATGTTCTG+AGG | - | chr4.1:29351730-29351749 | MS.gene52130:CDS | 45.0% | |
TTGTCAGTAGGCCTCCTATT+AGG | - | chr4.1:29350776-29350795 | MS.gene52130:intron | 45.0% | |
! | AAGTGTTGTGGCAAATGTGC+TGG | - | chr4.1:29352084-29352103 | MS.gene52130:intron | 45.0% |
! | AGTTTTTGACCTTTCCCTCG+CGG | + | chr4.1:29352794-29352813 | None:intergenic | 45.0% |
! | ATTGCTGATGGATCTCAACC+TGG | - | chr4.1:29351355-29351374 | MS.gene52130:CDS | 45.0% |
! | GAAGTGCTAAGAGCTGAAGA+GGG | - | chr4.1:29351786-29351805 | MS.gene52130:CDS | 45.0% |
! | GATACACTTCTGGGTATTGC+AGG | + | chr4.1:29348983-29349002 | None:intergenic | 45.0% |
! | GGTGATGAGAAAACTGGTCT+TGG | - | chr4.1:29349524-29349543 | MS.gene52130:intron | 45.0% |
! | TGAAGTGCTAAGAGCTGAAG+AGG | - | chr4.1:29351785-29351804 | MS.gene52130:CDS | 45.0% |
! | TGAGACTGACTCCCTAAAGT+AGG | + | chr4.1:29354310-29354329 | None:intergenic | 45.0% |
! | TGATGATGACCCTAACTGCA+TGG | - | chr4.1:29350198-29350217 | MS.gene52130:intron | 45.0% |
! | TTTTCAGCTTTCTCTGCTGC+AGG | + | chr4.1:29353143-29353162 | None:intergenic | 45.0% |
!! | GGTGGCGGTTATTTTGCTTA+TGG | - | chr4.1:29350916-29350935 | MS.gene52130:CDS | 45.0% |
!! | ATATATATATATATATATTG+AGG | + | chr4.1:29349445-29349426 | None:intergenic | 5.0% |
AAAGCATGTTGACACGGGCA+TGG | - | chr4.1:29350549-29350568 | MS.gene52130:intron | 50.0% | |
AACAGCTAGGTCTGCCTTCT+CGG | + | chr4.1:29353403-29353422 | None:intergenic | 50.0% | |
AAGAAGCCATTAGCTGGGCA+TGG | - | chr4.1:29349109-29349128 | MS.gene52130:intron | 50.0% | |
AAGCATGTTGACACGGGCAT+GGG | - | chr4.1:29350550-29350569 | MS.gene52130:intron | 50.0% | |
AAGGGAGGGAATTGACAGTC+AGG | - | chr4.1:29350895-29350914 | MS.gene52130:intron | 50.0% | |
ACCAGCTCGGATACACTTCT+GGG | + | chr4.1:29348992-29349011 | None:intergenic | 50.0% | |
ACTCTGCTCTTTGCTAACGC+CGG | - | chr4.1:29348604-29348623 | MS.gene52130:intron | 50.0% | |
AGAAGCCATTAGCTGGGCAT+GGG | - | chr4.1:29349110-29349129 | MS.gene52130:intron | 50.0% | |
AGACAGGGTTGTAGCCTTTG+TGG | - | chr4.1:29351490-29351509 | MS.gene52130:intron | 50.0% | |
AGCAGAGTAGGGTCATTGAG+AGG | + | chr4.1:29348592-29348611 | None:intergenic | 50.0% | |
AGCCTTTGTGGAGATGCACA+AGG | - | chr4.1:29351502-29351521 | MS.gene52130:intron | 50.0% | |
AGGCACCTTCTTCACAGACA+GGG | - | chr4.1:29351475-29351494 | MS.gene52130:intron | 50.0% | |
ATCTCACGTTGATGTTGGCC+TGG | - | chr4.1:29353446-29353465 | MS.gene52130:intron | 50.0% | |
ATTTCCGAGCAAGGTCCACA+AGG | + | chr4.1:29350133-29350152 | None:intergenic | 50.0% | |
CAAAGCTGTAGTGTGTGCTG+GGG | - | chr4.1:29353785-29353804 | MS.gene52130:intron | 50.0% | |
CACACCTTCTTCGAGATGCT+GGG | - | chr4.1:29349057-29349076 | MS.gene52130:intron | 50.0% | |
CAGTTCAATAGGGAGGCTGA+CGG | - | chr4.1:29350505-29350524 | MS.gene52130:intron | 50.0% | |
CATTGTGCTTACCACCAGCT+CGG | + | chr4.1:29349005-29349024 | None:intergenic | 50.0% | |
CCTGCAAAGCATGTTGACAC+GGG | - | chr4.1:29350544-29350563 | MS.gene52130:intron | 50.0% | |
CTCACCACAGTTCAATAGGG+AGG | - | chr4.1:29350498-29350517 | MS.gene52130:CDS | 50.0% | |
CTGCTCATATGCCAAGTGCT+GGG | - | chr4.1:29349928-29349947 | MS.gene52130:CDS | 50.0% | |
GAGTTTGCCATATGCGTCCT+TGG | - | chr4.1:29353662-29353681 | MS.gene52130:intron | 50.0% | |
GCCTGCAAAGCATGTTGACA+CGG | - | chr4.1:29350543-29350562 | MS.gene52130:intron | 50.0% | |
GCGTTAGCAAAGAGCAGAGT+AGG | + | chr4.1:29348604-29348623 | None:intergenic | 50.0% | |
GCTAGGCTCTCTAACATCCT+AGG | - | chr4.1:29350959-29350978 | MS.gene52130:CDS | 50.0% | |
GGAAAAGGAGGTCTTGCAAC+GGG | - | chr4.1:29353894-29353913 | MS.gene52130:intron | 50.0% | |
GGGTTGTTGCAGATCACATC+AGG | - | chr4.1:29351317-29351336 | MS.gene52130:CDS | 50.0% | |
GGTCATTGAGAGGAACGACA+GGG | + | chr4.1:29348582-29348601 | None:intergenic | 50.0% | |
GGTCCAACTTTCCCAGAGTA+TGG | + | chr4.1:29351265-29351284 | None:intergenic | 50.0% | |
GTATACTCCGTCGAGCAGTT+CGG | - | chr4.1:29351754-29351773 | MS.gene52130:CDS | 50.0% | |
GTCACTTGACATTGAGTGGC+CGG | - | chr4.1:29348489-29348508 | MS.gene52130:CDS | 50.0% | |
GTGCCGGAGAAAGGAGATAA+AGG | - | chr4.1:29353807-29353826 | MS.gene52130:intron | 50.0% | |
GTGCCTTCCTCAAGACATGA+AGG | + | chr4.1:29351461-29351480 | None:intergenic | 50.0% | |
GTTACCCAGCATCTCGAAGA+AGG | + | chr4.1:29349064-29349083 | None:intergenic | 50.0% | |
TCACACCTTCTTCGAGATGC+TGG | - | chr4.1:29349056-29349075 | MS.gene52130:intron | 50.0% | |
TCAGCCTCCCTATTGAACTG+TGG | + | chr4.1:29350505-29350524 | None:intergenic | 50.0% | |
TCTTCGAGATGCTGGGTAAC+TGG | - | chr4.1:29349064-29349083 | MS.gene52130:intron | 50.0% | |
TGATCTTGACGATGTGGGGA+AGG | - | chr4.1:29349023-29349042 | MS.gene52130:intron | 50.0% | |
TGCATCTGTGCCCTGAGAAT+CGG | + | chr4.1:29354548-29354567 | None:intergenic | 50.0% | |
TTTGGGAGAGACTCGAAGCT+AGG | - | chr4.1:29350942-29350961 | MS.gene52130:CDS | 50.0% | |
! | AAGGCACCTTCTTCACAGAC+AGG | - | chr4.1:29351474-29351493 | MS.gene52130:intron | 50.0% |
! | ACGAGTGAGTTTGCTCACAG+CGG | + | chr4.1:29348959-29348978 | None:intergenic | 50.0% |
! | AGTTTGCTCACAGCGGTGTT+AGG | + | chr4.1:29348952-29348971 | None:intergenic | 50.0% |
! | CTGATGGATCTCAACCTGGT+AGG | - | chr4.1:29351359-29351378 | MS.gene52130:CDS | 50.0% |
! | GCATCTCGAAGAAGGTGTGA+TGG | + | chr4.1:29349056-29349075 | None:intergenic | 50.0% |
! | TTCTGGGAGATGGGTGTTAC+TGG | - | chr4.1:29350106-29350125 | MS.gene52130:intron | 50.0% |
!! | AATGCTTTGGGGCCACTGAA+AGG | - | chr4.1:29353858-29353877 | MS.gene52130:intron | 50.0% |
!! | ATGCTTTGGGGCCACTGAAA+GGG | - | chr4.1:29353859-29353878 | MS.gene52130:intron | 50.0% |
!! | ATGGGTGTTACTGGTCCTTG+TGG | - | chr4.1:29350115-29350134 | MS.gene52130:intron | 50.0% |
!! | GTATGCACCACCGATTCTCA+GGG | - | chr4.1:29354535-29354554 | MS.gene52130:CDS | 50.0% |
!! | TGTATGCACCACCGATTCTC+AGG | - | chr4.1:29354534-29354553 | MS.gene52130:CDS | 50.0% |
AAAGGAAGAACGCGTCCAGG+AGG | + | chr4.1:29349590-29349609 | None:intergenic | 55.0% | |
AAGCTCCCATGCCCAGCTAA+TGG | + | chr4.1:29349118-29349137 | None:intergenic | 55.0% | |
ATCGTGCTATGAAAGCCGCG+AGG | - | chr4.1:29352776-29352795 | MS.gene52130:intron | 55.0% | |
ATCTGTGCCCTGAGAATCGG+TGG | + | chr4.1:29354545-29354564 | None:intergenic | 55.0% | |
CACCAGCTCGGATACACTTC+TGG | + | chr4.1:29348993-29349012 | None:intergenic | 55.0% | |
CACGAACTGCTGCAACATCC+AGG | + | chr4.1:29353467-29353486 | None:intergenic | 55.0% | |
CCAAAAGGAAGAACGCGTCC+AGG | + | chr4.1:29349593-29349612 | None:intergenic | 55.0% | |
CCCGTGTCAACATGCTTTGC+AGG | + | chr4.1:29350547-29350566 | None:intergenic | 55.0% | |
CGACAGGGCTAGACTTCCAA+TGG | + | chr4.1:29348567-29348586 | None:intergenic | 55.0% | |
CTATGAAAGCCGCGAGGGAA+AGG | - | chr4.1:29352782-29352801 | MS.gene52130:intron | 55.0% | |
GCTGCTCATATGCCAAGTGC+TGG | - | chr4.1:29349927-29349946 | MS.gene52130:CDS | 55.0% | |
GGAGGGAATTGACAGTCAGG+TGG | - | chr4.1:29350898-29350917 | MS.gene52130:intron | 55.0% | |
GGATGTTGCAGCAGTTCGTG+AGG | - | chr4.1:29353467-29353486 | MS.gene52130:intron | 55.0% | |
GGGAAATATACTGAGCGGGG+AGG | - | chr4.1:29352433-29352452 | MS.gene52130:intron | 55.0% | |
GGGAATTGACAGTCAGGTGG+CGG | - | chr4.1:29350901-29350920 | MS.gene52130:intron | 55.0% | |
GGGTCATTGAGAGGAACGAC+AGG | + | chr4.1:29348583-29348602 | None:intergenic | 55.0% | |
GTCCATACCGAACTGCTCGA+CGG | + | chr4.1:29351764-29351783 | None:intergenic | 55.0% | |
TCGTGCTATGAAAGCCGCGA+GGG | - | chr4.1:29352777-29352796 | MS.gene52130:intron | 55.0% | |
TGGTCCTTGTGGACCTTGCT+CGG | - | chr4.1:29350126-29350145 | MS.gene52130:intron | 55.0% | |
! | ACCCAGAAGTGTATCCGAGC+TGG | - | chr4.1:29348988-29349007 | MS.gene52130:intron | 55.0% |
! | CAGAAGTGTATCCGAGCTGG+TGG | - | chr4.1:29348991-29349010 | MS.gene52130:intron | 55.0% |
! | CCTGGACGCGTTCTTCCTTT+TGG | - | chr4.1:29349590-29349609 | MS.gene52130:CDS | 55.0% |
! | CGGCCATACTCTGGGAAAGT+TGG | - | chr4.1:29351259-29351278 | MS.gene52130:intron | 55.0% |
! | CTCTGGGAAAGTTGGACCAG+AGG | - | chr4.1:29351267-29351286 | MS.gene52130:intron | 55.0% |
! | GGGTGGGTTCAGAACTCAGA+AGG | + | chr4.1:29352870-29352889 | None:intergenic | 55.0% |
!! | TATTTTGGGTGGGGCGAGCA+GGG | + | chr4.1:29350291-29350310 | None:intergenic | 55.0% |
!!! | TTATTTTGGGTGGGGCGAGC+AGG | + | chr4.1:29350292-29350311 | None:intergenic | 55.0% |
ACTGGTGCTCGGCCATACTC+TGG | - | chr4.1:29351250-29351269 | MS.gene52130:intron | 60.0% | |
AGGAGGTCTTGCAACGGGAC+AGG | - | chr4.1:29353899-29353918 | MS.gene52130:intron | 60.0% | |
CTCCGTCGAGCAGTTCGGTA+TGG | - | chr4.1:29351759-29351778 | MS.gene52130:CDS | 60.0% | |
CTGGTGCTCGGCCATACTCT+GGG | - | chr4.1:29351251-29351270 | MS.gene52130:intron | 60.0% | |
GGGCCACTGAAAGGGAGATG+TGG | - | chr4.1:29353867-29353886 | MS.gene52130:intron | 60.0% | |
GTGTCTCTGACGCGCTTTGC+CGG | + | chr4.1:29348511-29348530 | None:intergenic | 60.0% | |
TGGCACTGTGACGTGGGATG+TGG | + | chr4.1:29351884-29351903 | None:intergenic | 60.0% | |
TGTAGTGTGTGCTGGGGTGC+CGG | - | chr4.1:29353791-29353810 | MS.gene52130:intron | 60.0% | |
!! | ATTTTGGGTGGGGCGAGCAG+GGG | + | chr4.1:29350290-29350309 | None:intergenic | 60.0% |
!! | TGTGCTGGGGTGCCGGAGAA+AGG | - | chr4.1:29353798-29353817 | MS.gene52130:intron | 65.0% |
!! | TTTTGGGTGGGGCGAGCAGG+GGG | + | chr4.1:29350289-29350308 | None:intergenic | 65.0% |
GGGGCGAGCAGGGGGAGAAA+TGG | + | chr4.1:29350281-29350300 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 29348475 | 29354627 | 29348475 | ID=MS.gene52130 |
chr4.1 | mRNA | 29348475 | 29354627 | 29348475 | ID=MS.gene52130.t1;Parent=MS.gene52130 |
chr4.1 | exon | 29354477 | 29354627 | 29354477 | ID=MS.gene52130.t1.exon1;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29354477 | 29354627 | 29354477 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29353956 | 29354194 | 29353956 | ID=MS.gene52130.t1.exon2;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29353956 | 29354194 | 29353956 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29353483 | 29353623 | 29353483 | ID=MS.gene52130.t1.exon3;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29353483 | 29353623 | 29353483 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29352856 | 29353002 | 29352856 | ID=MS.gene52130.t1.exon4;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29352856 | 29353002 | 29352856 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29352442 | 29352594 | 29352442 | ID=MS.gene52130.t1.exon5;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29352442 | 29352594 | 29352442 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29351726 | 29351855 | 29351726 | ID=MS.gene52130.t1.exon6;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29351726 | 29351855 | 29351726 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29351282 | 29351378 | 29351282 | ID=MS.gene52130.t1.exon7;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29351282 | 29351378 | 29351282 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29350904 | 29351024 | 29350904 | ID=MS.gene52130.t1.exon8;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29350904 | 29351024 | 29350904 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29350648 | 29350707 | 29350648 | ID=MS.gene52130.t1.exon9;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29350648 | 29350707 | 29350648 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29350467 | 29350517 | 29350467 | ID=MS.gene52130.t1.exon10;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29350467 | 29350517 | 29350467 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29350277 | 29350372 | 29350277 | ID=MS.gene52130.t1.exon11;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29350277 | 29350372 | 29350277 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29349915 | 29350004 | 29349915 | ID=MS.gene52130.t1.exon12;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29349915 | 29350004 | 29349915 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29349587 | 29349769 | 29349587 | ID=MS.gene52130.t1.exon13;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29349587 | 29349769 | 29349587 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29349182 | 29349358 | 29349182 | ID=MS.gene52130.t1.exon14;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29349182 | 29349358 | 29349182 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
chr4.1 | exon | 29348475 | 29348546 | 29348475 | ID=MS.gene52130.t1.exon15;Parent=MS.gene52130.t1 |
chr4.1 | CDS | 29348475 | 29348546 | 29348475 | ID=cds.MS.gene52130.t1;Parent=MS.gene52130.t1 |
Gene Sequence |
Protein sequence |