Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56710.t1 | XP_003588445.2 | 96.1 | 560 | 18 | 4 | 1 | 559 | 18 | 574 | 2.50E-299 | 1037.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56710.t1 | Q8L5Z4 | 74.6 | 500 | 126 | 1 | 60 | 559 | 86 | 584 | 3.7e-214 | 745.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56710.t1 | G7I278 | 96.1 | 560 | 18 | 4 | 1 | 559 | 18 | 574 | 1.8e-299 | 1037.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene56710 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene56710 | 0.839048 | 2.00E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene56710 | 0.811524 | 6.70E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene56710 | 0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene56710 | 0.843695 | 1.20E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene56710 | 0.818519 | 1.88E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene56710 | 0.826315 | 2.90E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene56710 | 0.817275 | 3.59E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene56710 | 0.812741 | 3.64E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene56710 | 0.814381 | 1.59E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene56710 | 0.839587 | 1.45E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene56710 | 0.824417 | 8.17E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene56710 | 0.831629 | 1.50E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene56710 | 0.829229 | 5.79E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene56710 | 0.843916 | 1.04E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene56710 | 0.814214 | 1.73E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene56710 | 0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene56710 | 0.837301 | 5.64E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene56710 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene56710 | 0.820816 | 5.61E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene56710 | 0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene56710 | 0.80134 | 9.43E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene56710 | 0.815155 | 1.07E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene56710 | 0.819698 | 1.01E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene56710 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene56710 | 0.801176 | 1.02E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene56710 | 0.809217 | 2.11E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene56710 | 0.811018 | 8.63E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene56710 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene56710 | 0.810974 | 8.83E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene56710 | 0.811506 | 6.77E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene56710 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene053579 | MS.gene56710 | 0.828495 | 8.71E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene56710 | 0.804264 | 2.35E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene56710 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene56710 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene56710 | 0.808207 | 3.47E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene56710 | 0.818604 | 1.80E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene56710 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene56710 | 0.808372 | 3.20E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene56710 | 0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene56710 | 0.805563 | 1.26E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene56710 | 0.813124 | 3.00E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene56710 | 0.803741 | 3.02E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene56710 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene56710 | 0.809845 | 1.55E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene56710 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene56710 | 0.812927 | 3.31E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene56710 | 0.870169 | 1.79E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene56710 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene56710 | 0.819195 | 1.32E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene56710 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene56710 | 0.81647 | 5.44E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene56710 | 0.80444 | 2.16E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene56710 | 0.816268 | 6.04E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene56710 | 0.821123 | 4.77E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene56710 | 0.826276 | 2.97E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene56710 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene56710 | 0.800871 | 1.18E-48 | -1.69E-46 |
| MS.gene058323 | MS.gene56710 | 0.808884 | 2.49E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene56710 | 0.831965 | 1.24E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene56710 | 0.822878 | 1.87E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene56710 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene059029 | MS.gene56710 | 0.807715 | 4.42E-50 | -1.69E-46 |
| MS.gene059079 | MS.gene56710 | 0.899673 | 1.57E-77 | -1.69E-46 |
| MS.gene05934 | MS.gene56710 | 0.852554 | 4.28E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene56710 | 0.835877 | 1.30E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene56710 | 0.800707 | 1.27E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene56710 | 0.805379 | 1.37E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene56710 | 0.801807 | 7.56E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene56710 | 0.809901 | 1.50E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene56710 | 0.864717 | 9.95E-65 | -1.69E-46 |
| MS.gene060193 | MS.gene56710 | 0.831878 | 1.30E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene56710 | 0.814774 | 1.30E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene56710 | 0.83121 | 1.90E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene56710 | 0.82401 | 1.02E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene56710 | 0.81024 | 1.27E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene56710 | 0.812199 | 4.78E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene56710 | 0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene56710 | 0.848814 | 4.82E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56710.t1 | MTR_1g007320 | 96.071 | 560 | 18 | 4 | 1 | 559 | 18 | 574 | 0.0 | 1088 |
| MS.gene56710.t1 | MTR_1g007320 | 92.500 | 560 | 17 | 5 | 1 | 559 | 18 | 553 | 0.0 | 1035 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56710.t1 | AT2G25870 | 74.743 | 487 | 123 | 0 | 73 | 559 | 98 | 584 | 0.0 | 734 |
| MS.gene56710.t1 | AT5G38747 | 57.627 | 59 | 22 | 1 | 366 | 424 | 73 | 128 | 1.85e-14 | 71.6 |
Find 124 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGCTTGTTACATCTTT+TGG | 0.104044 | 1.3:-12125247 | MS.gene56710:CDS |
| CCAGCAATTGCAACCATTTC+GGG | 0.172046 | 1.3:-12127808 | MS.gene56710:CDS |
| TTCCAGGGATTGCTTGTTTA+TGG | 0.209459 | 1.3:-12123086 | MS.gene56710:intron |
| CAACAAGTGGATCATGAAAA+AGG | 0.221799 | 1.3:+12122464 | None:intergenic |
| CCCTTCTGTTGAAGATCTTC+TGG | 0.243748 | 1.3:-12122314 | MS.gene56710:CDS |
| CCCGAAATGGTTGCAATTGC+TGG | 0.248358 | 1.3:+12127808 | None:intergenic |
| ACCAGCAATTGCAACCATTT+CGG | 0.249025 | 1.3:-12127809 | MS.gene56710:CDS |
| AATTACCATCTGAACTGTTT+TGG | 0.282851 | 1.3:+12125088 | None:intergenic |
| GCAGGCATGTCTTTACTCTT+TGG | 0.308750 | 1.3:-12122533 | MS.gene56710:intron |
| AAGTAACTAACCAAGATTTC+AGG | 0.308843 | 1.3:+12127657 | None:intergenic |
| ATGCTTGAGCTGGCTTCTTT+AGG | 0.329248 | 1.3:-12120902 | MS.gene56710:CDS |
| CAGCTATATCTTCTGTGATA+TGG | 0.329588 | 1.3:-12124883 | MS.gene56710:CDS |
| GCCTGATGATCCTGAAATCT+TGG | 0.343687 | 1.3:-12127667 | MS.gene56710:intron |
| AACTCCTTCTTCTTCCTCTT+CGG | 0.352512 | 1.3:+12127726 | None:intergenic |
| TCTTTACTCTTTGGAGAGTA+AGG | 0.360636 | 1.3:-12122524 | MS.gene56710:CDS |
| TGAAGAGGCTGAAGTAGAAA+TGG | 0.361449 | 1.3:-12125205 | MS.gene56710:CDS |
| TTGGTTCGTGGTATATTGTA+TGG | 0.364756 | 1.3:+12122434 | None:intergenic |
| CCTTTATTTGCAGCTTATGT+TGG | 0.380058 | 1.3:-12125925 | MS.gene56710:intron |
| TGTCCCAATGGCAATGAAAC+TGG | 0.386115 | 1.3:-12126245 | MS.gene56710:CDS |
| GTTGTTGAATGCGACGGAAT+AGG | 0.387795 | 1.3:+12127896 | None:intergenic |
| CTTTATTTGCAGCTTATGTT+GGG | 0.398548 | 1.3:-12125924 | MS.gene56710:intron |
| AAACTCTCTTCAATGCAAAT+CGG | 0.409571 | 1.3:+12127690 | None:intergenic |
| TCTTCTTCCTCTTCGGCGTT+CGG | 0.418770 | 1.3:+12127733 | None:intergenic |
| GACAAGGTCGGGAAATATAT+AGG | 0.421336 | 1.3:-12123061 | MS.gene56710:CDS |
| CTGGCATTTGATGGTTTGAA+AGG | 0.435654 | 1.3:-12126226 | MS.gene56710:CDS |
| AAAGCTGTGGCAAACGCAAT+TGG | 0.436884 | 1.3:-12120848 | MS.gene56710:CDS |
| TTTGTTGCATCTGACCAGTA+TGG | 0.437315 | 1.3:+12121847 | None:intergenic |
| AAAAGTGCTGCTTGATCACT+TGG | 0.439349 | 1.3:-12121746 | MS.gene56710:CDS |
| GGTACAATTTCCAGCATGTC+TGG | 0.440193 | 1.3:+12121796 | None:intergenic |
| TTTAAGAAGGTGGATTTAGC+TGG | 0.441156 | 1.3:-12124476 | MS.gene56710:CDS |
| CAGAAGATATAGCTGAACTT+TGG | 0.444755 | 1.3:+12124891 | None:intergenic |
| AATTGCGTTTGCCACAGCTT+TGG | 0.449220 | 1.3:+12120850 | None:intergenic |
| ACCAAGATTTCAGGATCATC+AGG | 0.450187 | 1.3:+12127666 | None:intergenic |
| CATGCTGGAAATTGTACCCT+TGG | 0.454073 | 1.3:-12121791 | MS.gene56710:CDS |
| TCTGGCATCTGCTGACATAC+AGG | 0.454582 | 1.3:-12122296 | MS.gene56710:intron |
| AATGCCAGTTTCATTGCCAT+TGG | 0.454647 | 1.3:+12126241 | None:intergenic |
| TGTTTATGGTAGACAAGGTC+GGG | 0.459418 | 1.3:-12123072 | MS.gene56710:CDS |
| AACTCTCTTCAATGCAAATC+GGG | 0.460255 | 1.3:+12127691 | None:intergenic |
| CGGAATAGGAATGGGATTGA+GGG | 0.461244 | 1.3:+12127910 | None:intergenic |
| TTAGGCATTGCACTGAGTAA+TGG | 0.461385 | 1.3:-12120884 | MS.gene56710:CDS |
| GCAATGAAACTGGCATTTGA+TGG | 0.464043 | 1.3:-12126235 | MS.gene56710:CDS |
| TCCAACCAAGACTTTGCAAA+AGG | 0.464603 | 1.3:+12125166 | None:intergenic |
| AGTCTTGGTTGGAAAGGAAA+AGG | 0.470726 | 1.3:-12125156 | MS.gene56710:CDS |
| AATGAGGCACCTTTGGTTCG+TGG | 0.470950 | 1.3:+12122422 | None:intergenic |
| GCAAGACAAGCAGAGGAAAG+AGG | 0.471221 | 1.3:-12125873 | MS.gene56710:CDS |
| ATGCCAGTTTCATTGCCATT+GGG | 0.481316 | 1.3:+12126242 | None:intergenic |
| TCAGAATGCATATCGATAGA+TGG | 0.486146 | 1.3:+12120793 | None:intergenic |
| TACCCTTGGGAACATGTAAA+GGG | 0.486391 | 1.3:-12121777 | MS.gene56710:CDS |
| GTACCCTTGGGAACATGTAA+AGG | 0.489992 | 1.3:-12121778 | MS.gene56710:CDS |
| CTCTCTCTTTCCTCCTCCGT+CGG | 0.491250 | 1.3:+12127773 | None:intergenic |
| CAAGACAAGCAGAGGAAAGA+GGG | 0.496208 | 1.3:-12125872 | MS.gene56710:CDS |
| ACGGAATAGGAATGGGATTG+AGG | 0.497725 | 1.3:+12127909 | None:intergenic |
| GCTGCACGTATTCCCCGAAA+TGG | 0.504722 | 1.3:+12127795 | None:intergenic |
| TGAGGCCTCTCTCAAAGCCT+TGG | 0.508435 | 1.3:+12124734 | None:intergenic |
| GATATGCAGATAATGGCTAT+TGG | 0.510832 | 1.3:-12120947 | MS.gene56710:intron |
| GTGGATTTAGCTGGAAAAGA+TGG | 0.511679 | 1.3:-12124467 | MS.gene56710:CDS |
| ATTACCTCTCGACAGACGTC+CGG | 0.513505 | 1.3:+12123026 | None:intergenic |
| TTGCAAAGTCTTGGTTGGAA+AGG | 0.513697 | 1.3:-12125162 | MS.gene56710:CDS |
| GGTTTAAGCAACGATGAAGA+TGG | 0.514129 | 1.3:-12120827 | MS.gene56710:CDS |
| ATATAGGAGCAGCTTAGATC+CGG | 0.515316 | 1.3:-12123045 | MS.gene56710:CDS |
| CGGATACATTACGTCCATAC+TGG | 0.518060 | 1.3:-12121861 | MS.gene56710:CDS |
| TCAGAAGCCGAACGCCGAAG+AGG | 0.519206 | 1.3:-12127740 | MS.gene56710:CDS |
| CTTGGGAGTTACTGCTAATG+AGG | 0.523463 | 1.3:-12121728 | MS.gene56710:intron |
| GTCAAAGACAGGAAGAAAGA+AGG | 0.523896 | 1.3:-12124933 | MS.gene56710:intron |
| GTCTTGGTTGGAAAGGAAAA+GGG | 0.525732 | 1.3:-12125155 | MS.gene56710:CDS |
| CTGCTATAGATGATGTTGGC+AGG | 0.526203 | 1.3:-12126180 | MS.gene56710:CDS |
| TTTGAGAGAGGCCTCAGCAA+GGG | 0.528767 | 1.3:-12124727 | MS.gene56710:CDS |
| GTGAAAATTGTGATAGCCAC+TGG | 0.536129 | 1.3:-12124702 | MS.gene56710:CDS |
| ATACGTGCAGCCGACGGAGG+AGG | 0.536167 | 1.3:-12127783 | MS.gene56710:CDS |
| GTTCCCTTTACATGTTCCCA+AGG | 0.536704 | 1.3:+12121774 | None:intergenic |
| CCTTCACAAAATGCAATAAG+TGG | 0.536888 | 1.3:+12122499 | None:intergenic |
| TACTGGTCAGATGCAACAAA+AGG | 0.539035 | 1.3:-12121844 | MS.gene56710:CDS |
| AATTTCTACTTCAACTGCCA+AGG | 0.539368 | 1.3:-12124751 | MS.gene56710:CDS |
| TGATGAGATCCGTATCCTCA+TGG | 0.539656 | 1.3:-12125838 | MS.gene56710:intron |
| TCAAGCTGTACCAGACATGC+TGG | 0.541670 | 1.3:-12121806 | MS.gene56710:CDS |
| TAAAACCAACCATGAGGATA+CGG | 0.541816 | 1.3:+12125829 | None:intergenic |
| GAATGCGACGGAATAGGAAT+GGG | 0.544042 | 1.3:+12127902 | None:intergenic |
| ATGCTGGAAATTGTACCCTT+GGG | 0.548664 | 1.3:-12121790 | MS.gene56710:CDS |
| GTAATGTATCCGACACACTC+TGG | 0.552692 | 1.3:+12121872 | None:intergenic |
| TGAATGCGACGGAATAGGAA+TGG | 0.553354 | 1.3:+12127901 | None:intergenic |
| GCCAGAAGATCTTCAACAGA+AGG | 0.554050 | 1.3:+12122313 | None:intergenic |
| TTGTTTATGGTAGACAAGGT+CGG | 0.557920 | 1.3:-12123073 | MS.gene56710:CDS |
| CCAAAAGATGTAACAAGCCA+TGG | 0.561789 | 1.3:+12125247 | None:intergenic |
| AACTGCCAAGGCTTTGAGAG+AGG | 0.562759 | 1.3:-12124739 | MS.gene56710:CDS |
| TGATCATGAATTAAGTGAAG+AGG | 0.564233 | 1.3:-12125220 | MS.gene56710:CDS |
| TAATGTATCCGACACACTCT+GGG | 0.564410 | 1.3:+12121873 | None:intergenic |
| TCAATGTCACAACATGAACC+TGG | 0.570480 | 1.3:-12126058 | MS.gene56710:CDS |
| GATACTGCTATAGATGATGT+TGG | 0.571424 | 1.3:-12126184 | MS.gene56710:CDS |
| TTGAGAGAGGCCTCAGCAAG+GGG | 0.575910 | 1.3:-12124726 | MS.gene56710:CDS |
| GAGGAGGAAAGAGAGAGTAT+CGG | 0.580158 | 1.3:-12127767 | MS.gene56710:CDS |
| TCCCACCAAAACAGTTCAGA+TGG | 0.584076 | 1.3:-12125093 | MS.gene56710:intron |
| TATATCTTCTGTGATATGGA+TGG | 0.587040 | 1.3:-12124879 | MS.gene56710:intron |
| AACGCCGAAGAGGAAGAAGA+AGG | 0.587913 | 1.3:-12127730 | MS.gene56710:CDS |
| TTCCCTTTACATGTTCCCAA+GGG | 0.592459 | 1.3:+12121775 | None:intergenic |
| ACAATAGGAAGATTGAGTCC+AGG | 0.593719 | 1.3:+12126040 | None:intergenic |
| AGTAGAAATGGAGAAAGAAG+AGG | 0.597908 | 1.3:-12125193 | MS.gene56710:CDS |
| GACAGCAGCAAGACAAGCAG+AGG | 0.601250 | 1.3:-12125880 | MS.gene56710:CDS |
| TGATGTAGAGATGCTTGAGC+TGG | 0.601463 | 1.3:-12120912 | MS.gene56710:CDS |
| CGGGGAATACGTGCAGCCGA+CGG | 0.602788 | 1.3:-12127789 | MS.gene56710:CDS |
| CTTTGAGAGAGGCCTCAGCA+AGG | 0.603249 | 1.3:-12124728 | MS.gene56710:CDS |
| CAGATAATGGCTATTGGTGA+TGG | 0.605598 | 1.3:-12120941 | MS.gene56710:CDS |
| TACAATATACCACGAACCAA+AGG | 0.605692 | 1.3:-12122431 | MS.gene56710:intron |
| CTCATCATTACAAAGAAGCA+CGG | 0.607621 | 1.3:+12126138 | None:intergenic |
| TTGCTTGTTTATGGTAGACA+AGG | 0.609418 | 1.3:-12123077 | MS.gene56710:CDS |
| GGAGGACGAGAGTTACAGAA+AGG | 0.611833 | 1.3:+12127861 | None:intergenic |
| GGAATACGTGCAGCCGACGG+AGG | 0.618353 | 1.3:-12127786 | MS.gene56710:CDS |
| TGCATATCGATAGATGGCGT+CGG | 0.621958 | 1.3:+12120799 | None:intergenic |
| AGATCCGGACGTCTGTCGAG+AGG | 0.628487 | 1.3:-12123030 | MS.gene56710:intron |
| GCAAAAGAGACACGGCGAGG+AGG | 0.631006 | 1.3:+12127843 | None:intergenic |
| TTGAGGGAGAGAGCACGTGA+TGG | 0.631396 | 1.3:+12127926 | None:intergenic |
| GGCGGCGTTGTTGAATGCGA+CGG | 0.632867 | 1.3:+12127890 | None:intergenic |
| CCAGAAGATCTTCAACAGAA+GGG | 0.634354 | 1.3:+12122314 | None:intergenic |
| GCTTCGTCTAAATGTCCCAA+TGG | 0.644543 | 1.3:-12126257 | MS.gene56710:CDS |
| TTGGGAACATGTAAAGGGAA+CGG | 0.644997 | 1.3:-12121772 | MS.gene56710:CDS |
| GTATGGAGTGAATCAACAAG+TGG | 0.650294 | 1.3:+12122451 | None:intergenic |
| CAGCAATTGCAACCATTTCG+GGG | 0.658853 | 1.3:-12127807 | MS.gene56710:CDS |
| AGACACTGCCCAGAGTGTGT+CGG | 0.664859 | 1.3:-12121881 | MS.gene56710:CDS |
| ATCAGAGAAGACCAAAGCTG+TGG | 0.670500 | 1.3:-12120861 | MS.gene56710:CDS |
| TGAAAAGCGCAAAAGAGACA+CGG | 0.674363 | 1.3:+12127835 | None:intergenic |
| AGCGCAAAAGAGACACGGCG+AGG | 0.682613 | 1.3:+12127840 | None:intergenic |
| AAAGTGCTGCTTGATCACTT+GGG | 0.694800 | 1.3:-12121745 | MS.gene56710:CDS |
| TGGTACAGCTTGAACAACAG+TGG | 0.699418 | 1.3:+12121816 | None:intergenic |
| AGAGTTACAGAAAGGAACGA+CGG | 0.736220 | 1.3:+12127869 | None:intergenic |
| GTTACAGAAAGGAACGACGG+CGG | 0.740877 | 1.3:+12127872 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 12120793 | 12127958 | 12120793 | ID=MS.gene56710 |
| chr1.3 | mRNA | 12120793 | 12127958 | 12120793 | ID=MS.gene56710.t1;Parent=MS.gene56710 |
| chr1.3 | exon | 12127668 | 12127958 | 12127668 | ID=MS.gene56710.t1.exon1;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12127668 | 12127958 | 12127668 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12126042 | 12126293 | 12126042 | ID=MS.gene56710.t1.exon2;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12126042 | 12126293 | 12126042 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12125839 | 12125934 | 12125839 | ID=MS.gene56710.t1.exon3;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12125839 | 12125934 | 12125839 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12125094 | 12125271 | 12125094 | ID=MS.gene56710.t1.exon4;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12125094 | 12125271 | 12125094 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12124880 | 12124948 | 12124880 | ID=MS.gene56710.t1.exon5;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12124880 | 12124948 | 12124880 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12124698 | 12124798 | 12124698 | ID=MS.gene56710.t1.exon6;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12124698 | 12124798 | 12124698 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12124430 | 12124522 | 12124430 | ID=MS.gene56710.t1.exon7;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12124430 | 12124522 | 12124430 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12123031 | 12123102 | 12123031 | ID=MS.gene56710.t1.exon8;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12123031 | 12123102 | 12123031 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12122432 | 12122551 | 12122432 | ID=MS.gene56710.t1.exon9;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12122432 | 12122551 | 12122432 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12122297 | 12122347 | 12122297 | ID=MS.gene56710.t1.exon10;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12122297 | 12122347 | 12122297 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12121729 | 12121917 | 12121729 | ID=MS.gene56710.t1.exon11;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12121729 | 12121917 | 12121729 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| chr1.3 | exon | 12120793 | 12120960 | 12120793 | ID=MS.gene56710.t1.exon12;Parent=MS.gene56710.t1 |
| chr1.3 | CDS | 12120793 | 12120960 | 12120793 | ID=cds.MS.gene56710.t1;Parent=MS.gene56710.t1 |
| Gene Sequence |
| Protein sequence |
