Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62860.t1 | XP_003608781.1 | 97.6 | 490 | 11 | 1 | 2 | 490 | 72 | 561 | 4.40E-271 | 943.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62860.t1 | Q9LD83 | 74.3 | 479 | 115 | 5 | 2 | 472 | 69 | 547 | 1.1e-198 | 694.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62860.t1 | G7JK66 | 97.6 | 490 | 11 | 1 | 2 | 490 | 72 | 561 | 3.1e-271 | 943.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene62860 | 0.820853 | 5.51E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene62860 | 0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene62860 | 0.826525 | 2.59E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene62860 | 0.811765 | 5.94E-51 | -1.69E-46 |
| MS.gene049373 | MS.gene62860 | 0.810443 | 1.15E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene62860 | 0.80232 | 5.93E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene62860 | 0.833823 | 4.27E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene62860 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene62860 | 0.894204 | 3.07E-75 | -1.69E-46 |
| MS.gene050323 | MS.gene62860 | 0.856342 | 3.43E-62 | -1.69E-46 |
| MS.gene050496 | MS.gene62860 | 0.872549 | 2.92E-67 | -1.69E-46 |
| MS.gene050502 | MS.gene62860 | 0.815046 | 1.13E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene62860 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene62860 | 0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene62860 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene62860 | 0.821875 | 3.20E-53 | -1.69E-46 |
| MS.gene050697 | MS.gene62860 | 0.845051 | 5.17E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene62860 | 0.806281 | 8.88E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene62860 | 0.811111 | 8.24E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene62860 | 0.809317 | 2.01E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene62860 | 0.811778 | 5.91E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene62860 | 0.801279 | 9.71E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene62860 | 0.870658 | 1.24E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene62860 | 0.869988 | 2.05E-66 | -1.69E-46 |
| MS.gene050904 | MS.gene62860 | 0.850709 | 1.42E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene62860 | 0.814576 | 1.44E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene62860 | 0.81544 | 9.23E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene62860 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene62860 | 0.805291 | 1.43E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene62860 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene62860 | 0.843219 | 1.60E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene62860 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene051941 | MS.gene62860 | 0.919407 | 4.68E-87 | -1.69E-46 |
| MS.gene052066 | MS.gene62860 | 0.809227 | 2.10E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene62860 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene052318 | MS.gene62860 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene62860 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene62860 | 0.818686 | 1.72E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene62860 | 0.829196 | 5.89E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene62860 | 0.836079 | 1.15E-56 | -1.69E-46 |
| MS.gene052504 | MS.gene62860 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene62860 | 0.810775 | 9.75E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene62860 | 0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene62860 | 0.834835 | 2.38E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene62860 | 0.832007 | 1.21E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene62860 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene62860 | 0.843558 | 1.30E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene62860 | 0.848758 | 5.00E-60 | -1.69E-46 |
| MS.gene053479 | MS.gene62860 | 0.838563 | 2.67E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene62860 | 0.826182 | 3.12E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene62860 | 0.817222 | 3.69E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene62860 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene62860 | 0.811862 | 5.66E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene62860 | 0.873685 | 1.21E-67 | -1.69E-46 |
| MS.gene054344 | MS.gene62860 | 0.815127 | 1.08E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene62860 | 0.816532 | 5.27E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene62860 | 0.841291 | 5.19E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene62860 | -0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene05494 | MS.gene62860 | 0.817894 | 2.60E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene62860 | 0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene62860 | 0.817472 | 3.24E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene62860 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene62860 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene62860 | 0.83443 | 3.01E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene62860 | 0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene62860 | 0.833245 | 5.96E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene62860 | 0.812072 | 5.10E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene62860 | 0.81682 | 4.54E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene62860 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene62860 | 0.874898 | 4.71E-68 | -1.69E-46 |
| MS.gene055909 | MS.gene62860 | 0.839029 | 2.02E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene62860 | 0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene62860 | 0.809247 | 2.08E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene62860 | 0.836428 | 9.41E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene62860 | 0.874366 | 7.15E-68 | -1.69E-46 |
| MS.gene056504 | MS.gene62860 | 0.864864 | 8.94E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene62860 | 0.837492 | 5.03E-57 | -1.69E-46 |
| MS.gene056877 | MS.gene62860 | 0.817499 | 3.20E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene62860 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene62860 | 0.894832 | 1.70E-75 | -1.69E-46 |
| MS.gene057076 | MS.gene62860 | 0.824645 | 7.21E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene62860 | 0.825709 | 4.04E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene62860 | 0.833259 | 5.91E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene62860 | 0.812337 | 4.46E-51 | -1.69E-46 |
| MS.gene057856 | MS.gene62860 | 0.824358 | 8.43E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene62860 | 0.839513 | 1.51E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene62860 | 0.849531 | 3.05E-60 | -1.69E-46 |
| MS.gene058334 | MS.gene62860 | -0.805651 | 1.20E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene62860 | 0.80947 | 1.86E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene62860 | 0.839045 | 2.00E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene62860 | 0.802884 | 4.54E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene62860 | 0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene62860 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene62860 | 0.856262 | 3.62E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene62860 | 0.806014 | 1.01E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene62860 | 0.80703 | 6.17E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene62860 | 0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene62860 | 0.801976 | 6.98E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene62860 | 0.803643 | 3.16E-49 | -1.69E-46 |
| MS.gene059756 | MS.gene62860 | 0.804641 | 1.96E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene62860 | 0.844483 | 7.35E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene62860 | 0.841038 | 6.05E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene62860 | 0.930144 | 2.51E-93 | -1.69E-46 |
| MS.gene06027 | MS.gene62860 | 0.811631 | 6.36E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene62860 | 0.840682 | 7.51E-58 | -1.69E-46 |
| MS.gene060593 | MS.gene62860 | -0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene62860 | -0.813113 | 3.02E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene62860 | 0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene62860 | 0.865117 | 7.45E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene62860 | 0.836338 | 9.92E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene62860 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene62860 | 0.837021 | 6.65E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene62860 | 0.876436 | 1.40E-68 | -1.69E-46 |
| MS.gene061044 | MS.gene62860 | -0.80468 | 1.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62860.t1 | MTR_4g101880 | 97.551 | 490 | 11 | 1 | 2 | 490 | 72 | 561 | 0.0 | 985 |
| MS.gene62860.t1 | MTR_6g034030 | 57.279 | 419 | 172 | 4 | 31 | 448 | 156 | 568 | 2.15e-169 | 491 |
| MS.gene62860.t1 | MTR_6g045200 | 52.814 | 462 | 205 | 5 | 31 | 485 | 146 | 601 | 1.55e-167 | 486 |
| MS.gene62860.t1 | MTR_0549s0020 | 56.563 | 419 | 174 | 4 | 31 | 447 | 83 | 495 | 4.42e-167 | 482 |
| MS.gene62860.t1 | MTR_6g034030 | 56.881 | 327 | 134 | 4 | 31 | 356 | 156 | 476 | 5.95e-127 | 379 |
| MS.gene62860.t1 | MTR_4g049640 | 43.810 | 315 | 164 | 7 | 118 | 422 | 51 | 362 | 8.55e-67 | 219 |
| MS.gene62860.t1 | MTR_3g112530 | 42.249 | 329 | 177 | 6 | 118 | 437 | 49 | 373 | 3.60e-64 | 213 |
| MS.gene62860.t1 | MTR_4g132400 | 37.231 | 325 | 194 | 5 | 106 | 421 | 33 | 356 | 3.54e-57 | 194 |
| MS.gene62860.t1 | MTR_0549s0010 | 48.780 | 123 | 57 | 3 | 31 | 151 | 83 | 201 | 7.19e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62860.t1 | AT1G12480 | 74.322 | 479 | 115 | 5 | 2 | 472 | 69 | 547 | 0.0 | 704 |
| MS.gene62860.t1 | AT5G24030 | 48.807 | 461 | 220 | 5 | 35 | 486 | 182 | 635 | 1.96e-153 | 451 |
| MS.gene62860.t1 | AT4G27970 | 47.510 | 482 | 218 | 8 | 4 | 483 | 41 | 489 | 2.37e-146 | 429 |
| MS.gene62860.t1 | AT4G27970 | 47.510 | 482 | 218 | 8 | 4 | 483 | 41 | 489 | 2.37e-146 | 429 |
| MS.gene62860.t1 | AT4G27970 | 51.381 | 362 | 154 | 4 | 122 | 483 | 1 | 340 | 1.53e-121 | 360 |
| MS.gene62860.t1 | AT4G27970 | 51.381 | 362 | 154 | 4 | 122 | 483 | 1 | 340 | 1.53e-121 | 360 |
| MS.gene62860.t1 | AT5G24030 | 52.853 | 333 | 149 | 3 | 35 | 366 | 182 | 507 | 6.31e-121 | 363 |
| MS.gene62860.t1 | AT4G27970 | 50.141 | 355 | 164 | 4 | 4 | 357 | 41 | 383 | 6.62e-117 | 349 |
| MS.gene62860.t1 | AT4G27970 | 50.141 | 355 | 164 | 4 | 4 | 357 | 41 | 383 | 6.62e-117 | 349 |
| MS.gene62860.t1 | AT1G62280 | 39.863 | 291 | 168 | 5 | 118 | 402 | 44 | 333 | 4.02e-70 | 228 |
| MS.gene62860.t1 | AT1G62262 | 39.677 | 310 | 168 | 5 | 118 | 421 | 44 | 340 | 1.33e-69 | 226 |
Find 134 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATATGGCCAGTGGCTTTC+TGG | 0.152773 | 8.1:-21846620 | MS.gene62860:CDS |
| ATCTTTGTTCTCTGAATTCT+TGG | 0.193283 | 8.1:+21845807 | None:intergenic |
| CTCTTCTGCATGCCTTCTAT+TGG | 0.231596 | 8.1:-21845945 | MS.gene62860:CDS |
| AAGAACCTGCTAAGTTCTTT+TGG | 0.232128 | 8.1:-21846499 | MS.gene62860:CDS |
| GGCAATGAAGTAGCAATTTC+TGG | 0.234340 | 8.1:+21846307 | None:intergenic |
| CTTCTTGAACTCAAAATATA+TGG | 0.237976 | 8.1:-21846635 | MS.gene62860:CDS |
| CGGTTTCCTATCGGATGTTT+TGG | 0.244309 | 8.1:-21846989 | MS.gene62860:CDS |
| TGCATTTATGTCATCAACTA+TGG | 0.263784 | 8.1:-21845989 | MS.gene62860:CDS |
| TTGAGTTCAAGAAGAAAATA+TGG | 0.276001 | 8.1:+21846644 | None:intergenic |
| TCTGTATCTGGTAACTTTGT+TGG | 0.292973 | 8.1:-21846551 | MS.gene62860:CDS |
| TCTAACCATCTTTCTGTATC+TGG | 0.299392 | 8.1:-21846563 | MS.gene62860:CDS |
| CAACTTCTTCTTTGCCCCTT+GGG | 0.318312 | 8.1:-21846756 | MS.gene62860:CDS |
| TTATGTCATAGGCCTTCTTC+AGG | 0.319730 | 8.1:+21845854 | None:intergenic |
| ATTGCTTGGCAGAGTATCTA+TGG | 0.341867 | 8.1:-21846347 | MS.gene62860:CDS |
| ATAGCAATAGCAAGATCATT+TGG | 0.352332 | 8.1:+21845910 | None:intergenic |
| CCAGCTTAGGAGGGGCAAAT+AGG | 0.352435 | 8.1:-21848122 | MS.gene62860:CDS |
| TTGGAGTCTCAGAAGATTAA+TGG | 0.354082 | 8.1:-21848000 | MS.gene62860:CDS |
| TGTCCAACGCTTTATGTCAT+AGG | 0.357125 | 8.1:+21845843 | None:intergenic |
| AAAAGTGGCCCTTTCTCCTT+CGG | 0.363919 | 8.1:-21847009 | MS.gene62860:CDS |
| TAAGCAGCCAAGCGGTTCTA+TGG | 0.365026 | 8.1:-21846952 | MS.gene62860:CDS |
| TCAACTTCTTCTTTGCCCCT+TGG | 0.380335 | 8.1:-21846757 | MS.gene62860:CDS |
| GCAGGGTGAAGGGTTTGTTT+TGG | 0.383255 | 8.1:+21846689 | None:intergenic |
| AGGGGCAAATAGGTTTGGTT+TGG | 0.395826 | 8.1:-21848112 | MS.gene62860:CDS |
| AGATACTTTGCTGCTCTTAG+AGG | 0.398399 | 8.1:-21847931 | MS.gene62860:CDS |
| AAAGATAATAGTAAGAATAA+TGG | 0.401905 | 8.1:-21845790 | MS.gene62860:CDS |
| TTAGGCAATGCCTCACTTGT+TGG | 0.406256 | 8.1:+21846422 | None:intergenic |
| TACACAGGATGCAATTCTTT+AGG | 0.410807 | 8.1:+21846404 | None:intergenic |
| TTGTGGCAGGGCTTGTTGCC+AGG | 0.411906 | 8.1:+21846924 | None:intergenic |
| AAACCCTTCACCCTGCCATT+TGG | 0.412401 | 8.1:-21846682 | MS.gene62860:CDS |
| ACAAGAAGTGGAACCAGCTT+AGG | 0.416763 | 8.1:-21848135 | MS.gene62860:CDS |
| TCTACATTTCCCTTGTCGTC+CGG | 0.420486 | 8.1:-21846277 | MS.gene62860:CDS |
| CTTCTGCGGCTTGTATTGCT+TGG | 0.429704 | 8.1:-21846361 | MS.gene62860:CDS |
| TTAGGAGGGGCAAATAGGTT+TGG | 0.431758 | 8.1:-21848117 | MS.gene62860:CDS |
| AGGCAAACGACGTCTGTCTA+AGG | 0.434372 | 8.1:-21846597 | MS.gene62860:CDS |
| TAGCAATAGCAAGATCATTT+GGG | 0.435954 | 8.1:+21845911 | None:intergenic |
| GAACAAAGTGCGCCAATAGA+AGG | 0.436176 | 8.1:+21845933 | None:intergenic |
| AAGAAGAAGTTGATTCGAAC+TGG | 0.442195 | 8.1:+21846767 | None:intergenic |
| TTTCTCCTTCGGTTTCCTAT+CGG | 0.455467 | 8.1:-21846998 | MS.gene62860:CDS |
| CCTATTTGCCCCTCCTAAGC+TGG | 0.455968 | 8.1:+21848122 | None:intergenic |
| AACTCCTTCTCTACTTTCCT+CGG | 0.459619 | 8.1:+21848021 | None:intergenic |
| AGATACAGAAAGATGGTTAG+AGG | 0.459783 | 8.1:+21846565 | None:intergenic |
| AGTATCTATGGAGAGTTTGA+TGG | 0.468765 | 8.1:-21846335 | MS.gene62860:CDS |
| AAGGTTTCTCCATGTTTCTC+CGG | 0.469656 | 8.1:-21846903 | MS.gene62860:CDS |
| GTCCGGATCAAATTCTTCAC+TGG | 0.473943 | 8.1:-21846260 | MS.gene62860:CDS |
| AAAAGGTAAAGATGAGAGGA+AGG | 0.478952 | 8.1:-21848163 | MS.gene62860:CDS |
| ATGAAAGTGCACCAAATGGC+AGG | 0.479531 | 8.1:+21846671 | None:intergenic |
| TAATAGCAGTGTCATGGCCT+AGG | 0.484926 | 8.1:-21845749 | None:intergenic |
| TTCTAGCTTCAAAAGTGGGT+TGG | 0.487202 | 8.1:-21846523 | MS.gene62860:CDS |
| ACATGGAGAAACCTTGTGGC+AGG | 0.489481 | 8.1:+21846911 | None:intergenic |
| CCGTGTCAGTGGCAACGATC+AGG | 0.489887 | 8.1:-21846062 | MS.gene62860:CDS |
| AGCAATTCTAGCTTCAAAAG+TGG | 0.493707 | 8.1:-21846528 | MS.gene62860:CDS |
| ATAACTAAGGGTCTTGCTCT+TGG | 0.494461 | 8.1:-21846015 | MS.gene62860:CDS |
| GATAGGAAACCGAAGGAGAA+AGG | 0.496633 | 8.1:+21847000 | None:intergenic |
| GCAAATAGGTTTGGTTTGGA+AGG | 0.497212 | 8.1:-21848108 | MS.gene62860:CDS |
| AACCAGTGAAGAATTTGATC+CGG | 0.506305 | 8.1:+21846258 | None:intergenic |
| TATGTCATAGGCCTTCTTCA+GGG | 0.506836 | 8.1:+21845855 | None:intergenic |
| AGACCCTTAGTTATGTAGGC+AGG | 0.515905 | 8.1:+21846024 | None:intergenic |
| AGAAGTGGAACCAGCTTAGG+AGG | 0.520012 | 8.1:-21848132 | MS.gene62860:CDS |
| GCAATTCTAGCTTCAAAAGT+GGG | 0.523003 | 8.1:-21846527 | MS.gene62860:CDS |
| AGCAAGACCCTTAGTTATGT+AGG | 0.525942 | 8.1:+21846020 | None:intergenic |
| TGCACCAAATGGCAGGGTGA+AGG | 0.528166 | 8.1:+21846678 | None:intergenic |
| GCACCAAATGGCAGGGTGAA+GGG | 0.530402 | 8.1:+21846679 | None:intergenic |
| GGTCCCTGCCTACATAACTA+AGG | 0.530961 | 8.1:-21846028 | MS.gene62860:CDS |
| ACAGCCCAAAAGAACTTAGC+AGG | 0.540870 | 8.1:+21846494 | None:intergenic |
| ATAGGAAACCGAAGGAGAAA+GGG | 0.541950 | 8.1:+21847001 | None:intergenic |
| TACTATGAAAGTGCACCAAA+TGG | 0.542959 | 8.1:+21846667 | None:intergenic |
| GCTATAACGAAGAGGAAGAA+AGG | 0.545782 | 8.1:-21845892 | MS.gene62860:CDS |
| TTCTCCCTACCGATGAAAAG+TGG | 0.545837 | 8.1:-21847024 | MS.gene62860:CDS |
| TCTCAGAAGATTAATGGTGC+TGG | 0.546334 | 8.1:-21847994 | MS.gene62860:CDS |
| GCCACTGACACGGTTGTCAT+CGG | 0.548925 | 8.1:+21846072 | None:intergenic |
| AGAAGTTGATTCGAACTGGA+TGG | 0.549353 | 8.1:+21846771 | None:intergenic |
| ACATTTGATACAGGACTATG+AGG | 0.550649 | 8.1:-21847053 | MS.gene62860:intron |
| AACTGCTATTAGCACTGCTA+AGG | 0.550771 | 8.1:+21846853 | None:intergenic |
| GTTCTCAACAGAGAAAGAAA+AGG | 0.550811 | 8.1:-21848180 | MS.gene62860:intron |
| ATGTCATAGGCCTTCTTCAG+GGG | 0.550868 | 8.1:+21845856 | None:intergenic |
| AAAGAAAAGGTAAAGATGAG+AGG | 0.555161 | 8.1:-21848167 | MS.gene62860:CDS |
| GTTAATGCAAGTGTTCCTGC+TGG | 0.556711 | 8.1:-21847955 | MS.gene62860:CDS |
| GCAGCAAAGTATCTACCAGC+AGG | 0.560339 | 8.1:+21847940 | None:intergenic |
| GAATATGCATTTGAGAATGT+AGG | 0.560627 | 8.1:+21846823 | None:intergenic |
| GAGGAAAGTAGAGAAGGAGT+TGG | 0.561770 | 8.1:-21848019 | MS.gene62860:CDS |
| AGAATTTGATCCGGACGACA+AGG | 0.563249 | 8.1:+21846267 | None:intergenic |
| GTATCTATGGAGAGTTTGAT+GGG | 0.563934 | 8.1:-21846334 | MS.gene62860:CDS |
| ACCTGAGTTAGATGAAGTCA+AGG | 0.566073 | 8.1:-21847908 | MS.gene62860:intron |
| GTTTGCCTCCAGAAAGCCAC+TGG | 0.566123 | 8.1:+21846612 | None:intergenic |
| AGCAGAATTCTTTGTTGCCG+AGG | 0.570215 | 8.1:-21848038 | MS.gene62860:CDS |
| TGACACTGCTATTATCGCAT+TGG | 0.573678 | 8.1:+21845758 | None:intergenic |
| AATACAAGCCGCAGAAGGAG+CGG | 0.575570 | 8.1:+21846367 | None:intergenic |
| CAAGCAATACAAGCCGCAGA+AGG | 0.576215 | 8.1:+21846362 | None:intergenic |
| TAACGAAGAGGAAGAAAGGT+GGG | 0.579532 | 8.1:-21845888 | MS.gene62860:CDS |
| GGAGAAGAAACCCCTGAAGA+AGG | 0.580629 | 8.1:-21845866 | MS.gene62860:CDS |
| TCCGATGACAACCGTGTCAG+TGG | 0.581671 | 8.1:-21846073 | MS.gene62860:CDS |
| AACGATCAGGTATGCAGAGG+CGG | 0.584532 | 8.1:-21846049 | MS.gene62860:CDS |
| GATACAGAAAGATGGTTAGA+GGG | 0.587581 | 8.1:+21846566 | None:intergenic |
| GTTGCCGAGGAAAGTAGAGA+AGG | 0.589628 | 8.1:-21848025 | MS.gene62860:CDS |
| GAAGATTAATGGTGCTGGTG+TGG | 0.591990 | 8.1:-21847989 | MS.gene62860:CDS |
| AACTTATATCCGGAGAAACA+TGG | 0.594407 | 8.1:+21846894 | None:intergenic |
| GACCCTTAGTTATGTAGGCA+GGG | 0.595065 | 8.1:+21846025 | None:intergenic |
| GAAGTGGAACCAGCTTAGGA+GGG | 0.599091 | 8.1:-21848131 | MS.gene62860:CDS |
| AGTTACCAGATACAGAAAGA+TGG | 0.605209 | 8.1:+21846558 | None:intergenic |
| AGAAGGAGCGGCAATAAACA+TGG | 0.605752 | 8.1:+21846379 | None:intergenic |
| ATGCGATAATAGCAGTGTCA+TGG | 0.608757 | 8.1:-21845755 | MS.gene62860:CDS |
| GTTTATTGCCGCTCCTTCTG+CGG | 0.609540 | 8.1:-21846375 | MS.gene62860:CDS |
| CCTGATCGTTGCCACTGACA+CGG | 0.609620 | 8.1:+21846062 | None:intergenic |
| GGTTAAGCCATAGAACCGCT+TGG | 0.610910 | 8.1:+21846945 | None:intergenic |
| ATAGAAGGCATGCAGAAGAG+TGG | 0.613902 | 8.1:+21845948 | None:intergenic |
| ACCTTGACTTCATCTAACTC+AGG | 0.616118 | 8.1:+21847907 | None:intergenic |
| AACTCAAAATATATGGCCAG+TGG | 0.618958 | 8.1:-21846628 | MS.gene62860:CDS |
| AGCGGTTCTATGGCTTAACC+TGG | 0.620950 | 8.1:-21846942 | MS.gene62860:CDS |
| GAATTTGATCCGGACGACAA+GGG | 0.623042 | 8.1:+21846268 | None:intergenic |
| TTGCTATTGCTATAACGAAG+AGG | 0.625499 | 8.1:-21845900 | MS.gene62860:CDS |
| CAGATACCAAAACATCCGAT+AGG | 0.625516 | 8.1:+21846983 | None:intergenic |
| TGGCAACAAGCCCTGCCACA+AGG | 0.626584 | 8.1:-21846922 | MS.gene62860:CDS |
| TATTCTGGAGGGTACAGAGA+TGG | 0.626926 | 8.1:+21846715 | None:intergenic |
| AGGCCTATGACATAAAGCGT+TGG | 0.628157 | 8.1:-21845846 | MS.gene62860:CDS |
| GTCCCTGCCTACATAACTAA+GGG | 0.630274 | 8.1:-21846027 | MS.gene62860:CDS |
| CATGGAGAAACCTTGTGGCA+GGG | 0.642484 | 8.1:+21846912 | None:intergenic |
| TGGCTTTGCACATTACCTTG+TGG | 0.643611 | 8.1:-21846471 | MS.gene62860:CDS |
| TGAAAGTGCACCAAATGGCA+GGG | 0.645337 | 8.1:+21846672 | None:intergenic |
| AACGAAGAGGAAGAAAGGTG+GGG | 0.649385 | 8.1:-21845887 | MS.gene62860:CDS |
| AACATCCGATAGGAAACCGA+AGG | 0.651583 | 8.1:+21846993 | None:intergenic |
| TATGGCCAGTGGCTTTCTGG+AGG | 0.651720 | 8.1:-21846617 | MS.gene62860:CDS |
| AAAACATGCATACAACCCAA+GGG | 0.655414 | 8.1:+21846741 | None:intergenic |
| GGCAACGATCAGGTATGCAG+AGG | 0.658848 | 8.1:-21846052 | MS.gene62860:CDS |
| TCAGAGATTACCAACAAGTG+AGG | 0.667013 | 8.1:-21846432 | MS.gene62860:CDS |
| GCAATAAACATGGAGTACAC+AGG | 0.680934 | 8.1:+21846389 | None:intergenic |
| AAGTGGAACCAGCTTAGGAG+GGG | 0.682019 | 8.1:-21848130 | MS.gene62860:CDS |
| TAGTTGATGACATAAATGCA+AGG | 0.687210 | 8.1:+21845992 | None:intergenic |
| TGACACGGTTGTCATCGGAA+AGG | 0.690469 | 8.1:+21846077 | None:intergenic |
| AAGGGAAATGTAGAGAAACA+AGG | 0.693364 | 8.1:+21846286 | None:intergenic |
| ATAACGAAGAGGAAGAAAGG+TGG | 0.695504 | 8.1:-21845889 | MS.gene62860:CDS |
| AGAAACATGGAGAAACCTTG+TGG | 0.707078 | 8.1:+21846907 | None:intergenic |
| AAACATGCATACAACCCAAG+GGG | 0.716501 | 8.1:+21846742 | None:intergenic |
| ACAATGTAACAAATACCACA+AGG | 0.740335 | 8.1:+21846456 | None:intergenic |
| TCTAGGACTAAGCAGCCAAG+CGG | 0.748005 | 8.1:-21846960 | MS.gene62860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAATAGTAAGAATAA+TGG | - | chr8.1:21848472-21848491 | MS.gene62860:intron | 15.0% |
| !! | AATTCATTGATATAAATTTG+GGG | - | chr8.1:21846738-21846757 | MS.gene62860:CDS | 15.0% |
| !! | ACAATTCATTGATATAAATT+TGG | - | chr8.1:21846736-21846755 | MS.gene62860:CDS | 15.0% |
| !! | CAATTCATTGATATAAATTT+GGG | - | chr8.1:21846737-21846756 | MS.gene62860:CDS | 15.0% |
| !! | CATATTAAAAAACTTATATC+CGG | + | chr8.1:21847381-21847400 | None:intergenic | 15.0% |
| !!! | AATTTAGCTTCTAAAATTAT+AGG | + | chr8.1:21846577-21846596 | None:intergenic | 15.0% |
| !!! | ACACATGTTTATATTTTTTT+TGG | + | chr8.1:21846958-21846977 | None:intergenic | 15.0% |
| !!! | TCTTAGTTTTAATAAATAGT+TGG | + | chr8.1:21845799-21845818 | None:intergenic | 15.0% |
| !! | ATCAAAATACAATTCAACTT+TGG | - | chr8.1:21848047-21848066 | MS.gene62860:CDS | 20.0% |
| !! | TTATAGCCAGAAAAAAAAAA+TGG | - | chr8.1:21845859-21845878 | MS.gene62860:CDS | 20.0% |
| !!! | AAAGTTGAATTGTATTTTGA+TGG | + | chr8.1:21848048-21848067 | None:intergenic | 20.0% |
| !!! | AATTTCAACAATCTAGATTT+TGG | - | chr8.1:21848073-21848092 | MS.gene62860:CDS | 20.0% |
| !!! | AGTTTTTTATATGTGTGTAA+TGG | + | chr8.1:21845773-21845792 | None:intergenic | 20.0% |
| !!! | ATTTCAACAATCTAGATTTT+GGG | - | chr8.1:21848074-21848093 | MS.gene62860:CDS | 20.0% |
| !!! | CGGATATAAGTTTTTTAATA+TGG | - | chr8.1:21847379-21847398 | MS.gene62860:intron | 20.0% |
| !!! | CTATGTATTTTTTAATTGAC+AGG | - | chr8.1:21848137-21848156 | MS.gene62860:CDS | 20.0% |
| !!! | GTTTTTTATATGTGTGTAAT+GGG | + | chr8.1:21845772-21845791 | None:intergenic | 20.0% |
| !!! | TTAATTATTTTGCTAAGCAT+AGG | - | chr8.1:21845836-21845855 | MS.gene62860:CDS | 20.0% |
| ! | ACAAAATCCTTAAATATGCT+TGG | - | chr8.1:21847040-21847059 | MS.gene62860:CDS | 25.0% |
| ! | ATTGTCTGTTAATACTTCTA+TGG | + | chr8.1:21846039-21846058 | None:intergenic | 25.0% |
| ! | CTTCTTGAACTCAAAATATA+TGG | - | chr8.1:21847627-21847646 | MS.gene62860:intron | 25.0% |
| ! | GTATGAAAAACATTTAGAAG+AGG | - | chr8.1:21846857-21846876 | MS.gene62860:CDS | 25.0% |
| ! | TCTAAAGAGATTAACATGAT+CGG | - | chr8.1:21846488-21846507 | MS.gene62860:CDS | 25.0% |
| ! | TTGAGTTCAAGAAGAAAATA+TGG | + | chr8.1:21847621-21847640 | None:intergenic | 25.0% |
| !! | CATATTTAAGGATTTTGTCT+CGG | + | chr8.1:21847038-21847057 | None:intergenic | 25.0% |
| !! | TTCTTTCCAAACTCATTTTA+TGG | - | chr8.1:21845898-21845917 | MS.gene62860:CDS | 25.0% |
| !!! | ATATTTTTTTTGGCAAACCA+AGG | + | chr8.1:21846948-21846967 | None:intergenic | 25.0% |
| !!! | ATCTCTTTAGAGTTAATTTC+AGG | + | chr8.1:21846479-21846498 | None:intergenic | 25.0% |
| !!! | TCTTGTCCATTTTTTTTTTC+TGG | + | chr8.1:21845868-21845887 | None:intergenic | 25.0% |
| AAAGAAAAGGTAAAGATGAG+AGG | - | chr8.1:21846095-21846114 | MS.gene62860:CDS | 30.0% | |
| AACAGAGTTTACATGATTGA+AGG | - | chr8.1:21848099-21848118 | MS.gene62860:CDS | 30.0% | |
| ACAATGTAACAAATACCACA+AGG | + | chr8.1:21847809-21847828 | None:intergenic | 30.0% | |
| ACAGAGTTTACATGATTGAA+GGG | - | chr8.1:21848100-21848119 | MS.gene62860:CDS | 30.0% | |
| ACTTAGACCAAGCATATTTA+AGG | + | chr8.1:21847050-21847069 | None:intergenic | 30.0% | |
| AGCACAAGTAATAGATACTT+CGG | - | chr8.1:21846796-21846815 | MS.gene62860:CDS | 30.0% | |
| AGGAAAACTACCAAACTAAA+AGG | - | chr8.1:21847089-21847108 | MS.gene62860:intron | 30.0% | |
| ATAGCAATAGCAAGATCATT+TGG | + | chr8.1:21848355-21848374 | None:intergenic | 30.0% | |
| ATCTTTGTTCTCTGAATTCT+TGG | + | chr8.1:21848458-21848477 | None:intergenic | 30.0% | |
| GAATATGCATTTGAGAATGT+AGG | + | chr8.1:21847442-21847461 | None:intergenic | 30.0% | |
| GCTTAGCAAAATAATTAAGC+TGG | + | chr8.1:21845834-21845853 | None:intergenic | 30.0% | |
| GTATGTCCATAAAATGAGTT+TGG | + | chr8.1:21845907-21845926 | None:intergenic | 30.0% | |
| TACAACTTTCACAAGGTTAT+AGG | + | chr8.1:21846651-21846670 | None:intergenic | 30.0% | |
| TAGCAATAGCAAGATCATTT+GGG | + | chr8.1:21848354-21848373 | None:intergenic | 30.0% | |
| TGAGTTTGGAAAGAATTAGT+AGG | + | chr8.1:21845893-21845912 | None:intergenic | 30.0% | |
| TGCATTTATGTCATCAACTA+TGG | - | chr8.1:21848273-21848292 | MS.gene62860:intron | 30.0% | |
| TTCACAAGGTTATAGGAAAA+TGG | + | chr8.1:21846644-21846663 | None:intergenic | 30.0% | |
| ! | ATAAATTTGGGGCTAAAAAC+AGG | - | chr8.1:21846749-21846768 | MS.gene62860:CDS | 30.0% |
| ! | ATAATTAAGCTGGCTCAATT+TGG | + | chr8.1:21845824-21845843 | None:intergenic | 30.0% |
| ! | CATTGATTACAACTTTCACA+AGG | + | chr8.1:21846658-21846677 | None:intergenic | 30.0% |
| ! | TTTAATTGACAGGTTTTCAG+TGG | - | chr8.1:21848147-21848166 | MS.gene62860:CDS | 30.0% |
| ! | TTTATATGTGTGTAATGGGA+GGG | + | chr8.1:21845768-21845787 | None:intergenic | 30.0% |
| !! | TAGTTGATGACATAAATGCA+AGG | + | chr8.1:21848273-21848292 | None:intergenic | 30.0% |
| !! | TAGTTTGGTAGTTTTCCTTT+CGG | + | chr8.1:21847087-21847106 | None:intergenic | 30.0% |
| !! | TGTAAGCTATCCTTTTAGTT+TGG | + | chr8.1:21847102-21847121 | None:intergenic | 30.0% |
| !! | TTTTATATGTGTGTAATGGG+AGG | + | chr8.1:21845769-21845788 | None:intergenic | 30.0% |
| !!! | TCAAATTCTTCACTGGTTTT+AGG | - | chr8.1:21848009-21848028 | MS.gene62860:CDS | 30.0% |
| AAAAACATGCATACAACCCA+AGG | + | chr8.1:21847525-21847544 | None:intergenic | 35.0% | |
| AAAACATGCATACAACCCAA+GGG | + | chr8.1:21847524-21847543 | None:intergenic | 35.0% | |
| AAAAGGTAAAGATGAGAGGA+AGG | - | chr8.1:21846099-21846118 | MS.gene62860:CDS | 35.0% | |
| AACCAGTGAAGAATTTGATC+CGG | + | chr8.1:21848007-21848026 | None:intergenic | 35.0% | |
| AACTCAAAATATATGGCCAG+TGG | - | chr8.1:21847634-21847653 | MS.gene62860:intron | 35.0% | |
| AACTTATATCCGGAGAAACA+TGG | + | chr8.1:21847371-21847390 | None:intergenic | 35.0% | |
| AAGGGAAATGTAGAGAAACA+AGG | + | chr8.1:21847979-21847998 | None:intergenic | 35.0% | |
| ACATTTGATACAGGACTATG+AGG | - | chr8.1:21847209-21847228 | MS.gene62860:intron | 35.0% | |
| AGATACAGAAAGATGGTTAG+AGG | + | chr8.1:21847700-21847719 | None:intergenic | 35.0% | |
| AGTATCTATGGAGAGTTTGA+TGG | - | chr8.1:21847927-21847946 | MS.gene62860:CDS | 35.0% | |
| AGTTACCAGATACAGAAAGA+TGG | + | chr8.1:21847707-21847726 | None:intergenic | 35.0% | |
| CAGAGTTTACATGATTGAAG+GGG | - | chr8.1:21848101-21848120 | MS.gene62860:CDS | 35.0% | |
| GATACAGAAAGATGGTTAGA+GGG | + | chr8.1:21847699-21847718 | None:intergenic | 35.0% | |
| GTATCTATGGAGAGTTTGAT+GGG | - | chr8.1:21847928-21847947 | MS.gene62860:CDS | 35.0% | |
| GTTCTCAACAGAGAAAGAAA+AGG | - | chr8.1:21846082-21846101 | MS.gene62860:CDS | 35.0% | |
| GTTGTGCATACATTTGATAC+AGG | - | chr8.1:21847200-21847219 | MS.gene62860:intron | 35.0% | |
| TACACAGGATGCAATTCTTT+AGG | + | chr8.1:21847861-21847880 | None:intergenic | 35.0% | |
| TCATACACATGCATATCTAG+TGG | + | chr8.1:21847171-21847190 | None:intergenic | 35.0% | |
| TCTAACCATCTTTCTGTATC+TGG | - | chr8.1:21847699-21847718 | MS.gene62860:intron | 35.0% | |
| TCTGTATCTGGTAACTTTGT+TGG | - | chr8.1:21847711-21847730 | MS.gene62860:intron | 35.0% | |
| TCTTAAGAACCTAGTGTACA+TGG | - | chr8.1:21846907-21846926 | MS.gene62860:CDS | 35.0% | |
| TTGGAGTCTCAGAAGATTAA+TGG | - | chr8.1:21846262-21846281 | MS.gene62860:CDS | 35.0% | |
| ! | AAGAACCTGCTAAGTTCTTT+TGG | - | chr8.1:21847763-21847782 | MS.gene62860:intron | 35.0% |
| ! | AGAACCTGCTAAGTTCTTTT+GGG | - | chr8.1:21847764-21847783 | MS.gene62860:intron | 35.0% |
| ! | AGACAATTTTCACTTGAGAC+AGG | - | chr8.1:21846052-21846071 | MS.gene62860:CDS | 35.0% |
| ! | TACTATGAAAGTGCACCAAA+TGG | + | chr8.1:21847598-21847617 | None:intergenic | 35.0% |
| ! | TTGCTATTGCTATAACGAAG+AGG | - | chr8.1:21848362-21848381 | MS.gene62860:intron | 35.0% |
| ! | TTTTTCATACGCGCTAATCA+AGG | + | chr8.1:21846847-21846866 | None:intergenic | 35.0% |
| !! | AAGAAGAAGTTGATTCGAAC+TGG | + | chr8.1:21847498-21847517 | None:intergenic | 35.0% |
| !! | AGCAATTCTAGCTTCAAAAG+TGG | - | chr8.1:21847734-21847753 | MS.gene62860:intron | 35.0% |
| !! | AGTTTGGTAGTTTTCCTTTC+GGG | + | chr8.1:21847086-21847105 | None:intergenic | 35.0% |
| !! | CATGATGAAGTTTTATCCGA+AGG | - | chr8.1:21845926-21845945 | MS.gene62860:CDS | 35.0% |
| !! | GCAATTCTAGCTTCAAAAGT+GGG | - | chr8.1:21847735-21847754 | MS.gene62860:intron | 35.0% |
| !! | TTGGGTTGTATGCATGTTTT+TGG | - | chr8.1:21847524-21847543 | MS.gene62860:intron | 35.0% |
| AAACATGCATACAACCCAAG+GGG | + | chr8.1:21847523-21847542 | None:intergenic | 40.0% | |
| AACTCCTTCTCTACTTTCCT+CGG | + | chr8.1:21846244-21846263 | None:intergenic | 40.0% | |
| AACTGCTATTAGCACTGCTA+AGG | + | chr8.1:21847412-21847431 | None:intergenic | 40.0% | |
| AAGGTTTCTCCATGTTTCTC+CGG | - | chr8.1:21847359-21847378 | MS.gene62860:intron | 40.0% | |
| ACCTGAGTTAGATGAAGTCA+AGG | - | chr8.1:21846354-21846373 | MS.gene62860:CDS | 40.0% | |
| ACCTTGACTTCATCTAACTC+AGG | + | chr8.1:21846358-21846377 | None:intergenic | 40.0% | |
| AGAAACATGGAGAAACCTTG+TGG | + | chr8.1:21847358-21847377 | None:intergenic | 40.0% | |
| AGATACTTTGCTGCTCTTAG+AGG | - | chr8.1:21846331-21846350 | MS.gene62860:CDS | 40.0% | |
| AGCAAGACCCTTAGTTATGT+AGG | + | chr8.1:21848245-21848264 | None:intergenic | 40.0% | |
| ATAACGAAGAGGAAGAAAGG+TGG | - | chr8.1:21848373-21848392 | MS.gene62860:intron | 40.0% | |
| ATAACTAAGGGTCTTGCTCT+TGG | - | chr8.1:21848247-21848266 | MS.gene62860:intron | 40.0% | |
| ATAGGAAACCGAAGGAGAAA+GGG | + | chr8.1:21847264-21847283 | None:intergenic | 40.0% | |
| ATGCGATAATAGCAGTGTCA+TGG | - | chr8.1:21848507-21848526 | MS.gene62860:intron | 40.0% | |
| CAGATACCAAAACATCCGAT+AGG | + | chr8.1:21847282-21847301 | None:intergenic | 40.0% | |
| GCAATAAACATGGAGTACAC+AGG | + | chr8.1:21847876-21847895 | None:intergenic | 40.0% | |
| GCTATAACGAAGAGGAAGAA+AGG | - | chr8.1:21848370-21848389 | MS.gene62860:intron | 40.0% | |
| GGCAATGAAGTAGCAATTTC+TGG | + | chr8.1:21847958-21847977 | None:intergenic | 40.0% | |
| TAACGAAGAGGAAGAAAGGT+GGG | - | chr8.1:21848374-21848393 | MS.gene62860:intron | 40.0% | |
| TACACATGCATATCTAGTGG+TGG | + | chr8.1:21847168-21847187 | None:intergenic | 40.0% | |
| TATGTCATAGGCCTTCTTCA+GGG | + | chr8.1:21848410-21848429 | None:intergenic | 40.0% | |
| TCAGAGATTACCAACAAGTG+AGG | - | chr8.1:21847830-21847849 | MS.gene62860:intron | 40.0% | |
| TCTCAGAAGATTAATGGTGC+TGG | - | chr8.1:21846268-21846287 | MS.gene62860:CDS | 40.0% | |
| TGACACTGCTATTATCGCAT+TGG | + | chr8.1:21848507-21848526 | None:intergenic | 40.0% | |
| TGTCCAACGCTTTATGTCAT+AGG | + | chr8.1:21848422-21848441 | None:intergenic | 40.0% | |
| TTACTTGTGCTACACGATGT+TGG | + | chr8.1:21846787-21846806 | None:intergenic | 40.0% | |
| TTATGTCATAGGCCTTCTTC+AGG | + | chr8.1:21848411-21848430 | None:intergenic | 40.0% | |
| TTTCTCCTTCGGTTTCCTAT+CGG | - | chr8.1:21847264-21847283 | MS.gene62860:intron | 40.0% | |
| ! | ATTGCTTGGCAGAGTATCTA+TGG | - | chr8.1:21847915-21847934 | MS.gene62860:CDS | 40.0% |
| !! | AGAAGTTGATTCGAACTGGA+TGG | + | chr8.1:21847494-21847513 | None:intergenic | 40.0% |
| !! | AGGAAGGTTTTGACAAGAAG+TGG | - | chr8.1:21846115-21846134 | MS.gene62860:intron | 40.0% |
| !! | GCAAATAGGTTTGGTTTGGA+AGG | - | chr8.1:21846154-21846173 | MS.gene62860:intron | 40.0% |
| !! | TTATTGATTCCACACCCGAA+AGG | - | chr8.1:21847069-21847088 | MS.gene62860:intron | 40.0% |
| !! | TTCTAGCTTCAAAAGTGGGT+TGG | - | chr8.1:21847739-21847758 | MS.gene62860:intron | 40.0% |
| !!! | GGATGTTTTGGTATCTGTCT+AGG | - | chr8.1:21847285-21847304 | MS.gene62860:intron | 40.0% |
| !!! | GGTTTGTTTTGGGACTATTC+TGG | + | chr8.1:21847565-21847584 | None:intergenic | 40.0% |
| !!! | TGTTTTGGGACTATTCTGGA+GGG | + | chr8.1:21847561-21847580 | None:intergenic | 40.0% |
| !!! | TTGTTTTGGGACTATTCTGG+AGG | + | chr8.1:21847562-21847581 | None:intergenic | 40.0% |
| AAAAGTGGCCCTTTCTCCTT+CGG | - | chr8.1:21847253-21847272 | MS.gene62860:intron | 45.0% | |
| AACATCCGATAGGAAACCGA+AGG | + | chr8.1:21847272-21847291 | None:intergenic | 45.0% | |
| AACGAAGAGGAAGAAAGGTG+GGG | - | chr8.1:21848375-21848394 | MS.gene62860:intron | 45.0% | |
| ACAAGAAGTGGAACCAGCTT+AGG | - | chr8.1:21846127-21846146 | MS.gene62860:intron | 45.0% | |
| ACAGCCCAAAAGAACTTAGC+AGG | + | chr8.1:21847771-21847790 | None:intergenic | 45.0% | |
| AGAAGGAGCGGCAATAAACA+TGG | + | chr8.1:21847886-21847905 | None:intergenic | 45.0% | |
| AGAATTTGATCCGGACGACA+AGG | + | chr8.1:21847998-21848017 | None:intergenic | 45.0% | |
| AGACCCTTAGTTATGTAGGC+AGG | + | chr8.1:21848241-21848260 | None:intergenic | 45.0% | |
| AGCAGAATTCTTTGTTGCCG+AGG | - | chr8.1:21846224-21846243 | MS.gene62860:intron | 45.0% | |
| AGGCCTATGACATAAAGCGT+TGG | - | chr8.1:21848416-21848435 | MS.gene62860:intron | 45.0% | |
| ATATATGGCCAGTGGCTTTC+TGG | - | chr8.1:21847642-21847661 | MS.gene62860:intron | 45.0% | |
| ATGTCATAGGCCTTCTTCAG+GGG | + | chr8.1:21848409-21848428 | None:intergenic | 45.0% | |
| CAACTTCTTCTTTGCCCCTT+GGG | - | chr8.1:21847506-21847525 | MS.gene62860:intron | 45.0% | |
| CTCTTCTGCATGCCTTCTAT+TGG | - | chr8.1:21848317-21848336 | MS.gene62860:intron | 45.0% | |
| GAACAAAGTGCGCCAATAGA+AGG | + | chr8.1:21848332-21848351 | None:intergenic | 45.0% | |
| GAATTTGATCCGGACGACAA+GGG | + | chr8.1:21847997-21848016 | None:intergenic | 45.0% | |
| GACCCTTAGTTATGTAGGCA+GGG | + | chr8.1:21848240-21848259 | None:intergenic | 45.0% | |
| GAGGAAAGTAGAGAAGGAGT+TGG | - | chr8.1:21846243-21846262 | MS.gene62860:intron | 45.0% | |
| GATAGGAAACCGAAGGAGAA+AGG | + | chr8.1:21847265-21847284 | None:intergenic | 45.0% | |
| GTCCCTGCCTACATAACTAA+GGG | - | chr8.1:21848235-21848254 | MS.gene62860:intron | 45.0% | |
| GTCCGGATCAAATTCTTCAC+TGG | - | chr8.1:21848002-21848021 | MS.gene62860:CDS | 45.0% | |
| GTTAATGCAAGTGTTCCTGC+TGG | - | chr8.1:21846307-21846326 | MS.gene62860:CDS | 45.0% | |
| TATCCGAAGGAGACGAAGAA+GGG | - | chr8.1:21845939-21845958 | MS.gene62860:CDS | 45.0% | |
| TCAACTTCTTCTTTGCCCCT+TGG | - | chr8.1:21847505-21847524 | MS.gene62860:intron | 45.0% | |
| TCTACATTTCCCTTGTCGTC+CGG | - | chr8.1:21847985-21848004 | MS.gene62860:CDS | 45.0% | |
| TTAGGAGGGGCAAATAGGTT+TGG | - | chr8.1:21846145-21846164 | MS.gene62860:intron | 45.0% | |
| TTAGGCAATGCCTCACTTGT+TGG | + | chr8.1:21847843-21847862 | None:intergenic | 45.0% | |
| TTATCCGAAGGAGACGAAGA+AGG | - | chr8.1:21845938-21845957 | MS.gene62860:CDS | 45.0% | |
| TTCTCCCTACCGATGAAAAG+TGG | - | chr8.1:21847238-21847257 | MS.gene62860:intron | 45.0% | |
| ! | ACATGATTGAAGGGGTGCAA+AGG | - | chr8.1:21848109-21848128 | MS.gene62860:CDS | 45.0% |
| ! | ACTTTTCATCGGTAGGGAGA+AGG | + | chr8.1:21847239-21847258 | None:intergenic | 45.0% |
| ! | AGGGGCAAATAGGTTTGGTT+TGG | - | chr8.1:21846150-21846169 | MS.gene62860:intron | 45.0% |
| ! | ATAGAAGGCATGCAGAAGAG+TGG | + | chr8.1:21848317-21848336 | None:intergenic | 45.0% |
| ! | ATGAAAGTGCACCAAATGGC+AGG | + | chr8.1:21847594-21847613 | None:intergenic | 45.0% |
| ! | CGGTTTCCTATCGGATGTTT+TGG | - | chr8.1:21847273-21847292 | MS.gene62860:intron | 45.0% |
| ! | GATACTTCGGCTCGTTAATG+TGG | - | chr8.1:21846809-21846828 | MS.gene62860:CDS | 45.0% |
| ! | GCTAAGTTCTTTTGGGCTGT+TGG | - | chr8.1:21847771-21847790 | MS.gene62860:intron | 45.0% |
| ! | TATTCTGGAGGGTACAGAGA+TGG | + | chr8.1:21847550-21847569 | None:intergenic | 45.0% |
| ! | TGAAAGTGCACCAAATGGCA+GGG | + | chr8.1:21847593-21847612 | None:intergenic | 45.0% |
| ! | TGGCTTTGCACATTACCTTG+TGG | - | chr8.1:21847791-21847810 | MS.gene62860:intron | 45.0% |
| !! | CAGGGTGAAGGGTTTGTTTT+GGG | + | chr8.1:21847575-21847594 | None:intergenic | 45.0% |
| !! | GAAGATTAATGGTGCTGGTG+TGG | - | chr8.1:21846273-21846292 | MS.gene62860:CDS | 45.0% |
| !!! | GAGAAAGGGCCACTTTTCAT+CGG | + | chr8.1:21847250-21847269 | None:intergenic | 45.0% |
| !!! | TAAAAATAATTATGTTATTT+CGG | + | chr8.1:21846710-21846729 | None:intergenic | 5.0% |
| AAACCCTTCACCCTGCCATT+TGG | - | chr8.1:21847580-21847599 | MS.gene62860:intron | 50.0% | |
| AACGATCAGGTATGCAGAGG+CGG | - | chr8.1:21848213-21848232 | MS.gene62860:intron | 50.0% | |
| AAGTGGAACCAGCTTAGGAG+GGG | - | chr8.1:21846132-21846151 | MS.gene62860:intron | 50.0% | |
| AATACAAGCCGCAGAAGGAG+CGG | + | chr8.1:21847898-21847917 | None:intergenic | 50.0% | |
| ACATGGAGAAACCTTGTGGC+AGG | + | chr8.1:21847354-21847373 | None:intergenic | 50.0% | |
| AGAAGTGGAACCAGCTTAGG+AGG | - | chr8.1:21846130-21846149 | MS.gene62860:intron | 50.0% | |
| AGCGGTTCTATGGCTTAACC+TGG | - | chr8.1:21847320-21847339 | MS.gene62860:intron | 50.0% | |
| AGGCAAACGACGTCTGTCTA+AGG | - | chr8.1:21847665-21847684 | MS.gene62860:intron | 50.0% | |
| AGTGTACATGGTTGTGCACG+AGG | - | chr8.1:21846919-21846938 | MS.gene62860:CDS | 50.0% | |
| CAAGCAATACAAGCCGCAGA+AGG | + | chr8.1:21847903-21847922 | None:intergenic | 50.0% | |
| CATGGAGAAACCTTGTGGCA+GGG | + | chr8.1:21847353-21847372 | None:intergenic | 50.0% | |
| CGTGCACAACCATGTACACT+AGG | + | chr8.1:21846919-21846938 | None:intergenic | 50.0% | |
| CTTCTGCGGCTTGTATTGCT+TGG | - | chr8.1:21847901-21847920 | MS.gene62860:intron | 50.0% | |
| GAAGTGGAACCAGCTTAGGA+GGG | - | chr8.1:21846131-21846150 | MS.gene62860:intron | 50.0% | |
| GGAGAAGAAACCCCTGAAGA+AGG | - | chr8.1:21848396-21848415 | MS.gene62860:intron | 50.0% | |
| GGTCCCTGCCTACATAACTA+AGG | - | chr8.1:21848234-21848253 | MS.gene62860:intron | 50.0% | |
| GGTTAAGCCATAGAACCGCT+TGG | + | chr8.1:21847320-21847339 | None:intergenic | 50.0% | |
| GTTGCCGAGGAAAGTAGAGA+AGG | - | chr8.1:21846237-21846256 | MS.gene62860:intron | 50.0% | |
| GTTTATTGCCGCTCCTTCTG+CGG | - | chr8.1:21847887-21847906 | MS.gene62860:intron | 50.0% | |
| GTTTCTCGAGCTCTCGTTGT+TGG | + | chr8.1:21846007-21846026 | None:intergenic | 50.0% | |
| TAAGCAGCCAAGCGGTTCTA+TGG | - | chr8.1:21847310-21847329 | MS.gene62860:intron | 50.0% | |
| TGACACGGTTGTCATCGGAA+AGG | + | chr8.1:21848188-21848207 | None:intergenic | 50.0% | |
| ! | CTTCGGCTCGTTAATGTGGT+TGG | - | chr8.1:21846813-21846832 | MS.gene62860:CDS | 50.0% |
| ! | GCAGCAAAGTATCTACCAGC+AGG | + | chr8.1:21846325-21846344 | None:intergenic | 50.0% |
| ! | TCTAGGACTAAGCAGCCAAG+CGG | - | chr8.1:21847302-21847321 | MS.gene62860:intron | 50.0% |
| ! | TGCTACACGATGTTGGTGAG+TGG | + | chr8.1:21846780-21846799 | None:intergenic | 50.0% |
| ! | TTGACAGGTTTTCAGTGGCG+TGG | - | chr8.1:21848152-21848171 | MS.gene62860:CDS | 50.0% |
| !! | GCAGGGTGAAGGGTTTGTTT+TGG | + | chr8.1:21847576-21847595 | None:intergenic | 50.0% |
| !! | GGTAGTTTTCCTTTCGGGTG+TGG | + | chr8.1:21847081-21847100 | None:intergenic | 50.0% |
| !!! | AAGGGCCACTTTTCATCGGT+AGG | + | chr8.1:21847246-21847265 | None:intergenic | 50.0% |
| !!! | AGGGCCACTTTTCATCGGTA+GGG | + | chr8.1:21847245-21847264 | None:intergenic | 50.0% |
| CCAGCTTAGGAGGGGCAAAT+AGG | - | chr8.1:21846140-21846159 | MS.gene62860:intron | 55.0% | |
| CCTATTTGCCCCTCCTAAGC+TGG | + | chr8.1:21846143-21846162 | None:intergenic | 55.0% | |
| CCTGATCGTTGCCACTGACA+CGG | + | chr8.1:21848203-21848222 | None:intergenic | 55.0% | |
| CGGCTCGTTAATGTGGTTGG+AGG | - | chr8.1:21846816-21846835 | MS.gene62860:CDS | 55.0% | |
| CGTCCCTTCTTCGTCTCCTT+CGG | + | chr8.1:21845945-21845964 | None:intergenic | 55.0% | |
| GCACCAAATGGCAGGGTGAA+GGG | + | chr8.1:21847586-21847605 | None:intergenic | 55.0% | |
| GCCACTGACACGGTTGTCAT+CGG | + | chr8.1:21848193-21848212 | None:intergenic | 55.0% | |
| GGCAACGATCAGGTATGCAG+AGG | - | chr8.1:21848210-21848229 | MS.gene62860:intron | 55.0% | |
| GGTTGTGCACGAGGATACCT+TGG | - | chr8.1:21846928-21846947 | MS.gene62860:CDS | 55.0% | |
| GTTTGCCTCCAGAAAGCCAC+TGG | + | chr8.1:21847653-21847672 | None:intergenic | 55.0% | |
| TATGGCCAGTGGCTTTCTGG+AGG | - | chr8.1:21847645-21847664 | MS.gene62860:intron | 55.0% | |
| TCCGATGACAACCGTGTCAG+TGG | - | chr8.1:21848189-21848208 | MS.gene62860:intron | 55.0% | |
| TGCACCAAATGGCAGGGTGA+AGG | + | chr8.1:21847587-21847606 | None:intergenic | 55.0% | |
| ! | ACAGGTTTTCAGTGGCGTGG+TGG | - | chr8.1:21848155-21848174 | MS.gene62860:CDS | 55.0% |
| ! | CAGGTTTTCAGTGGCGTGGT+GGG | - | chr8.1:21848156-21848175 | MS.gene62860:CDS | 55.0% |
| CCGTGTCAGTGGCAACGATC+AGG | - | chr8.1:21848200-21848219 | MS.gene62860:intron | 60.0% | |
| TGGCAACAAGCCCTGCCACA+AGG | - | chr8.1:21847340-21847359 | MS.gene62860:intron | 60.0% | |
| !! | TTGTGGCAGGGCTTGTTGCC+AGG | + | chr8.1:21847341-21847360 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 21845750 | 21848534 | 21845750 | ID=MS.gene62860 |
| chr8.1 | mRNA | 21845750 | 21848534 | 21845750 | ID=MS.gene62860.t1;Parent=MS.gene62860 |
| chr8.1 | exon | 21848530 | 21848534 | 21848530 | ID=MS.gene62860.t1.exon1;Parent=MS.gene62860.t1 |
| chr8.1 | CDS | 21848530 | 21848534 | 21848530 | ID=cds.MS.gene62860.t1;Parent=MS.gene62860.t1 |
| chr8.1 | exon | 21847909 | 21848191 | 21847909 | ID=MS.gene62860.t1.exon2;Parent=MS.gene62860.t1 |
| chr8.1 | CDS | 21847909 | 21848191 | 21847909 | ID=cds.MS.gene62860.t1;Parent=MS.gene62860.t1 |
| chr8.1 | exon | 21846254 | 21847062 | 21846254 | ID=MS.gene62860.t1.exon3;Parent=MS.gene62860.t1 |
| chr8.1 | CDS | 21846254 | 21847062 | 21846254 | ID=cds.MS.gene62860.t1;Parent=MS.gene62860.t1 |
| chr8.1 | exon | 21845750 | 21846125 | 21845750 | ID=MS.gene62860.t1.exon4;Parent=MS.gene62860.t1 |
| chr8.1 | CDS | 21845750 | 21846125 | 21845750 | ID=cds.MS.gene62860.t1;Parent=MS.gene62860.t1 |
| Gene Sequence |
| Protein sequence |
