Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92340.t1 | RHN53259.1 | 97.4 | 350 | 9 | 0 | 1 | 350 | 1 | 350 | 4.40E-183 | 650.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92340.t1 | Q9XIP7 | 80.0 | 350 | 70 | 0 | 1 | 350 | 1 | 350 | 8.7e-156 | 551.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92340.t1 | G7K0Z9 | 97.4 | 350 | 9 | 0 | 1 | 350 | 1 | 350 | 3.1e-183 | 650.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene92340 | 0.816808 | 4.57E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene92340 | 0.8395 | 1.53E-57 | -1.69E-46 |
| MS.gene049283 | MS.gene92340 | 0.814963 | 1.18E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene92340 | 0.811415 | 7.08E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene92340 | -0.806496 | 8.00E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene92340 | 0.830042 | 3.67E-55 | -1.69E-46 |
| MS.gene049585 | MS.gene92340 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene92340 | 0.838935 | 2.14E-57 | -1.69E-46 |
| MS.gene050105 | MS.gene92340 | 0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene92340 | 0.813309 | 2.73E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene92340 | 0.809857 | 1.54E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene92340 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene92340 | 0.820504 | 6.62E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene92340 | 0.817702 | 2.88E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene92340 | 0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene92340 | 0.802803 | 4.72E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene92340 | 0.820139 | 8.03E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene92340 | 0.808119 | 3.62E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene92340 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene051543 | MS.gene92340 | 0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene92340 | 0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene92340 | -0.847626 | 1.03E-59 | -1.69E-46 |
| MS.gene052242 | MS.gene92340 | -0.818497 | 1.90E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene92340 | 0.820817 | 5.61E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene92340 | 0.807035 | 6.15E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene92340 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene92340 | 0.824751 | 6.81E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene92340 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene92340 | 0.809854 | 1.54E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene92340 | 0.811251 | 7.69E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene92340 | 0.804359 | 2.24E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene92340 | 0.83482 | 2.40E-56 | -1.69E-46 |
| MS.gene05308 | MS.gene92340 | 0.803586 | 3.25E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene92340 | 0.835113 | 2.03E-56 | -1.69E-46 |
| MS.gene053575 | MS.gene92340 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene05364 | MS.gene92340 | 0.811285 | 7.56E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene92340 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene054222 | MS.gene92340 | 0.800235 | 1.58E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene92340 | 0.84748 | 1.13E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene92340 | 0.821988 | 3.01E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene92340 | 0.810669 | 1.03E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene92340 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene92340 | 0.813501 | 2.48E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene92340 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene92340 | 0.802251 | 6.13E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene92340 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene055724 | MS.gene92340 | 0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene92340 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene92340 | 0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene92340 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene92340 | 0.844351 | 7.98E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene92340 | 0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene92340 | 0.813886 | 2.04E-51 | -1.69E-46 |
| MS.gene056480 | MS.gene92340 | 0.833429 | 5.36E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene92340 | 0.81398 | 1.94E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene92340 | 0.812719 | 3.68E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene92340 | 0.820028 | 8.51E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene92340 | 0.825433 | 4.70E-54 | -1.69E-46 |
| MS.gene05690 | MS.gene92340 | 0.81066 | 1.03E-50 | -1.69E-46 |
| MS.gene056973 | MS.gene92340 | 0.82512 | 5.57E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene92340 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene92340 | 0.800927 | 1.15E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene92340 | 0.832177 | 1.10E-55 | -1.69E-46 |
| MS.gene057371 | MS.gene92340 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene92340 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene92340 | 0.838748 | 2.39E-57 | -1.69E-46 |
| MS.gene057600 | MS.gene92340 | 0.821154 | 4.69E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene92340 | 0.806099 | 9.69E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene92340 | 0.82697 | 2.02E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene92340 | 0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene058279 | MS.gene92340 | 0.802977 | 4.34E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene92340 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene92340 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene058647 | MS.gene92340 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene92340 | 0.802952 | 4.39E-49 | -1.69E-46 |
| MS.gene058919 | MS.gene92340 | 0.802917 | 4.47E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene92340 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene92340 | 0.816941 | 4.27E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene92340 | 0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene92340 | 0.826909 | 2.09E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene92340 | -0.812995 | 3.20E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene92340 | 0.820452 | 6.81E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene92340 | 0.80029 | 1.54E-48 | -1.69E-46 |
| MS.gene060373 | MS.gene92340 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene92340 | 0.819048 | 1.42E-52 | -1.69E-46 |
| MS.gene060777 | MS.gene92340 | 0.802801 | 4.72E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene92340 | 0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene92340 | 0.816354 | 5.77E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene92340 | 0.850492 | 1.64E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene92340 | 0.839725 | 1.33E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene92340 | 0.844359 | 7.94E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene92340 | 0.815384 | 9.50E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92340.t1 | MTR_5g005440 | 97.429 | 350 | 9 | 0 | 1 | 350 | 1 | 350 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92340.t1 | AT4G27630 | 80.571 | 350 | 67 | 1 | 1 | 350 | 1 | 349 | 0.0 | 585 |
| MS.gene92340.t1 | AT4G27630 | 80.571 | 350 | 67 | 1 | 1 | 350 | 1 | 349 | 0.0 | 584 |
| MS.gene92340.t1 | AT4G27630 | 80.571 | 350 | 67 | 1 | 1 | 350 | 1 | 349 | 0.0 | 583 |
| MS.gene92340.t1 | AT1G64990 | 80.000 | 350 | 70 | 0 | 1 | 350 | 1 | 350 | 0.0 | 570 |
| MS.gene92340.t1 | AT1G64990 | 80.000 | 350 | 70 | 0 | 1 | 350 | 1 | 350 | 0.0 | 570 |
| MS.gene92340.t1 | AT4G27630 | 75.401 | 374 | 67 | 2 | 1 | 350 | 1 | 373 | 0.0 | 569 |
| MS.gene92340.t1 | AT4G27630 | 80.476 | 210 | 41 | 0 | 141 | 350 | 21 | 230 | 2.31e-118 | 344 |
| MS.gene92340.t1 | AT4G27630 | 80.476 | 210 | 41 | 0 | 141 | 350 | 21 | 230 | 1.58e-117 | 345 |
| MS.gene92340.t1 | AT4G27630 | 80.476 | 210 | 41 | 0 | 141 | 350 | 21 | 230 | 1.58e-117 | 345 |
Find 65 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGTTTGATACTGTTAT+TGG | 0.235327 | 5.1:+505293 | MS.gene92340:CDS |
| GCTTTCAAAGCAATTGTTCT+TGG | 0.239320 | 5.1:+507469 | MS.gene92340:CDS |
| ATGGCTGTTCTATCTGGTTT+TGG | 0.288518 | 5.1:+505528 | MS.gene92340:CDS |
| ACTGTCATGGCTGTTCTATC+TGG | 0.294941 | 5.1:+505522 | MS.gene92340:CDS |
| ATCAAGTAACAATGATAATA+AGG | 0.302602 | 5.1:-505327 | None:intergenic |
| CCAATGCCATCACCTGATAA+AGG | 0.308808 | 5.1:+505450 | MS.gene92340:CDS |
| GACACTAACCTGAGATAATA+AGG | 0.315088 | 5.1:-508743 | None:intergenic |
| CCTCAATTGGTCAGTAGAAT+TGG | 0.365468 | 5.1:+505486 | MS.gene92340:CDS |
| GTTAGGATGGGTTGGGGAAG+AGG | 0.370065 | 5.1:+504960 | None:intergenic |
| CACTTGGTTGGGCAGGTGTT+TGG | 0.371948 | 5.1:+505021 | MS.gene92340:CDS |
| TTTCTTTACTATGCCTCAAT+TGG | 0.379528 | 5.1:+505473 | MS.gene92340:CDS |
| GAAAATTATTCTCGCTCAAA+TGG | 0.382660 | 5.1:+505671 | MS.gene92340:CDS |
| GAAACTAACCTTGCTCCTTC+TGG | 0.382664 | 5.1:-506037 | None:intergenic |
| AAGTTTGTGTTCACTTGGTT+GGG | 0.388000 | 5.1:+505010 | MS.gene92340:CDS |
| TTGGAAGGTTCAGTTGTGTT+AGG | 0.389903 | 5.1:+504987 | MS.gene92340:CDS |
| GAAGTTTGTGTTCACTTGGT+TGG | 0.392795 | 5.1:+505009 | MS.gene92340:CDS |
| TCTTGGTGTTAGGATGGGTT+GGG | 0.396451 | 5.1:+504953 | None:intergenic |
| CTGCTGCATATTCTCGAACT+TGG | 0.408126 | 5.1:+507747 | MS.gene92340:CDS |
| ATAGTAAAGAAACCTTTATC+AGG | 0.415101 | 5.1:-505462 | None:intergenic |
| CATCTATTCTACAATGCAAC+TGG | 0.416041 | 5.1:-508765 | None:intergenic |
| CTCCTTCTGGTCCTCTTGCA+CGG | 0.431487 | 5.1:-506024 | None:intergenic |
| GTCAGTAGAATTGGTGTCAT+TGG | 0.434768 | 5.1:+505495 | MS.gene92340:CDS |
| GGGTTGGGGAAGAGGAATCT+TGG | 0.438549 | 5.1:+504968 | MS.gene92340:CDS |
| TCTTTCCAAGGCCTTGATCT+CGG | 0.449342 | 5.1:-505607 | None:intergenic |
| GGAAACCGAGATCAAGGCCT+TGG | 0.464243 | 5.1:+505602 | MS.gene92340:CDS |
| AAATGCAGCCTTATTATCTC+AGG | 0.465152 | 5.1:+508735 | MS.gene92340:CDS |
| AATACGTTTGATAAAAGATC+TGG | 0.470086 | 5.1:-505982 | None:intergenic |
| AGGCATGGAAGCAGAGGTAC+TGG | 0.470967 | 5.1:+507436 | MS.gene92340:CDS |
| ATCTTGGTGTTAGGATGGGT+TGG | 0.472515 | 5.1:+504952 | None:intergenic |
| GGACATATGCAGAATCTACT+AGG | 0.481782 | 5.1:+507773 | MS.gene92340:CDS |
| GACATACTCTTTAGAGAGGA+TGG | 0.483171 | 5.1:-505165 | None:intergenic |
| TTGTGTGTATAAAATGATCA+AGG | 0.483771 | 5.1:+507814 | MS.gene92340:CDS |
| TTGTGTTCACTTGGTTGGGC+AGG | 0.487039 | 5.1:+505014 | MS.gene92340:CDS |
| CCTTTATCAGGTGATGGCAT+TGG | 0.491266 | 5.1:-505450 | None:intergenic |
| AAGAGTGATAAATAACTGTA+TGG | 0.498599 | 5.1:-505564 | None:intergenic |
| GATTGAGGAAACCGAGATCA+AGG | 0.500784 | 5.1:+505596 | MS.gene92340:CDS |
| ATAGGGCAAGAGTTGTGAAC+TGG | 0.500826 | 5.1:+505259 | MS.gene92340:intron |
| CTGCATAAGTTGTCTTTCCA+AGG | 0.506266 | 5.1:-505619 | None:intergenic |
| ACTCTTCATCAGAGAGATTG+AGG | 0.519209 | 5.1:+505581 | MS.gene92340:CDS |
| TGTCATTGGTGTTACTGTCA+TGG | 0.534360 | 5.1:+505509 | MS.gene92340:CDS |
| CCAATTCTACTGACCAATTG+AGG | 0.538924 | 5.1:-505486 | None:intergenic |
| TTAGGAAGTTTGTGTTCACT+TGG | 0.543040 | 5.1:+505005 | MS.gene92340:CDS |
| CTATGAGCTTCGACAAGCAA+AGG | 0.544516 | 5.1:+507496 | MS.gene92340:CDS |
| TACTTGATGCTTAAAAGCAG+TGG | 0.544743 | 5.1:+505342 | MS.gene92340:CDS |
| TATTCTCGCTCAAATGGAGA+TGG | 0.549765 | 5.1:+505677 | MS.gene92340:CDS |
| AAGAAACCTTTATCAGGTGA+TGG | 0.558347 | 5.1:-505456 | None:intergenic |
| CTTGGTGTTAGGATGGGTTG+GGG | 0.562766 | 5.1:+504954 | None:intergenic |
| AGAACTGAAAGAGCTGCACT+TGG | 0.565424 | 5.1:+505369 | MS.gene92340:CDS |
| TTGCATTGTAGAATAGATGA+TGG | 0.567375 | 5.1:+508769 | MS.gene92340:CDS |
| ATACTTATCATCCTTGTCAC+GGG | 0.571650 | 5.1:-508685 | None:intergenic |
| CTTATGCAGTCAATTGAGAC+TGG | 0.572440 | 5.1:+505633 | MS.gene92340:CDS |
| GCATATTCTCGAACTTGGAA+AGG | 0.574715 | 5.1:+507752 | MS.gene92340:CDS |
| ATGTGAAGATATCAAAGGCA+TGG | 0.581837 | 5.1:+507421 | MS.gene92340:intron |
| GTTGAATGTGAAGATATCAA+AGG | 0.586462 | 5.1:+507416 | MS.gene92340:intron |
| TATACTTATCATCCTTGTCA+CGG | 0.589557 | 5.1:-508686 | None:intergenic |
| CAAGAGGACCAGAAGGAGCA+AGG | 0.594045 | 5.1:+506029 | MS.gene92340:CDS |
| AGTTGTTCGATCCGTGCAAG+AGG | 0.594350 | 5.1:+506013 | MS.gene92340:CDS |
| ACATACTCTTTAGAGAGGAT+GGG | 0.598774 | 5.1:-505164 | None:intergenic |
| TATCAAAGGCATGGAAGCAG+AGG | 0.616520 | 5.1:+507430 | MS.gene92340:CDS |
| ATCCGTGCAAGAGGACCAGA+AGG | 0.621117 | 5.1:+506022 | MS.gene92340:CDS |
| GTTCAGTTGATCCCGTGACA+AGG | 0.624543 | 5.1:+508674 | MS.gene92340:CDS |
| GAACAAGCAAGGATCTGAAG+AGG | 0.635624 | 5.1:+505701 | MS.gene92340:CDS |
| ATGGAGATGGAGAACAAGCA+AGG | 0.635747 | 5.1:+505690 | MS.gene92340:CDS |
| AAATGACATACTCTTTAGAG+AGG | 0.641736 | 5.1:-505169 | None:intergenic |
| TGGGGAAGAGGAATCTTGGA+AGG | 0.674682 | 5.1:+504972 | MS.gene92340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAATTTGTTGTAATA+GGG | + | chr5.1:505242-505261 | MS.gene92340:intron | 10.0% |
| !! | AATAAAACCTATAAAGAAAA+TGG | - | chr5.1:505899-505918 | None:intergenic | 15.0% |
| !! | AATATATTGCTAATTGTATT+AGG | + | chr5.1:508058-508077 | MS.gene92340:intron | 15.0% |
| !! | AATCAATTAATCAATCAATT+AGG | - | chr5.1:505210-505229 | None:intergenic | 15.0% |
| !! | GGAAAAAAAGTAATTATATT+TGG | - | chr5.1:508587-508606 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGCTAGATTA+AGG | + | chr5.1:507867-507886 | MS.gene92340:intron | 15.0% |
| !!! | GATAATTAATTTGTTGTAAT+AGG | + | chr5.1:505241-505260 | MS.gene92340:intron | 15.0% |
| !! | AAAATTTACTGTAGTCAATA+TGG | + | chr5.1:508473-508492 | MS.gene92340:intron | 20.0% |
| !! | AATTATATTGACATTTCCTT+TGG | + | chr5.1:505805-505824 | MS.gene92340:intron | 20.0% |
| !! | ATCAAGTAACAATGATAATA+AGG | - | chr5.1:505330-505349 | None:intergenic | 20.0% |
| !! | ATCAATCAATTAGGTTAATA+AGG | - | chr5.1:505201-505220 | None:intergenic | 20.0% |
| !! | ATGATAGTACAAATATTCAA+AGG | + | chr5.1:506415-506434 | MS.gene92340:intron | 20.0% |
| !! | GAAACATATAAATTGAGAAA+TGG | - | chr5.1:507163-507182 | None:intergenic | 20.0% |
| !! | GAATTTAGTACAATGTTTAA+TGG | + | chr5.1:506458-506477 | MS.gene92340:intron | 20.0% |
| !! | TATTAAAATTGTGAAACCAA+AGG | - | chr5.1:505824-505843 | None:intergenic | 20.0% |
| !! | TGAAGTGATTCATTTAATAA+TGG | + | chr5.1:507310-507329 | MS.gene92340:intron | 20.0% |
| !! | TGAATATCCAATAAAGAAAA+AGG | - | chr5.1:507127-507146 | None:intergenic | 20.0% |
| !!! | AAAATTTATATCTCTAAAGC+AGG | - | chr5.1:506093-506112 | None:intergenic | 20.0% |
| !!! | AAGTTTTCCTTTTTCTTTAT+TGG | + | chr5.1:507117-507136 | MS.gene92340:intron | 20.0% |
| !!! | ATGTTTCCTTTTTATCAAAA+TGG | + | chr5.1:507176-507195 | MS.gene92340:intron | 20.0% |
| !!! | CATTTTATACACACAATAAA+CGG | - | chr5.1:507810-507829 | None:intergenic | 20.0% |
| !!! | CTATTTTCCAGTTTTTTTAA+AGG | - | chr5.1:507563-507582 | None:intergenic | 20.0% |
| !!! | TGCTTTAGAGATATAAATTT+TGG | + | chr5.1:506092-506111 | MS.gene92340:intron | 20.0% |
| !!! | TGTTTCCTTTTTATCAAAAT+GGG | + | chr5.1:507177-507196 | MS.gene92340:intron | 20.0% |
| ! | AAATCTGCTTACTATGAAAA+TGG | + | chr5.1:507706-507725 | MS.gene92340:intron | 25.0% |
| ! | AAGAGTGATAAATAACTGTA+TGG | - | chr5.1:505567-505586 | None:intergenic | 25.0% |
| ! | AATACGTTTGATAAAAGATC+TGG | - | chr5.1:505985-506004 | None:intergenic | 25.0% |
| ! | AATTTACCAAAATATCCATG+TGG | + | chr5.1:508140-508159 | MS.gene92340:intron | 25.0% |
| ! | ACTTATTTGCATGATTGAAA+GGG | - | chr5.1:507208-507227 | None:intergenic | 25.0% |
| ! | ATAGTAAAGAAACCTTTATC+AGG | - | chr5.1:505465-505484 | None:intergenic | 25.0% |
| ! | ATTCTGTTTGATACTGTTAT+TGG | + | chr5.1:505293-505312 | MS.gene92340:CDS | 25.0% |
| ! | CTGAATAAAGCTTATGATAT+GGG | + | chr5.1:508110-508129 | MS.gene92340:intron | 25.0% |
| ! | GTAGTTGCAGAAAATTATAA+AGG | + | chr5.1:506496-506515 | MS.gene92340:intron | 25.0% |
| ! | TACTTATTTGCATGATTGAA+AGG | - | chr5.1:507209-507228 | None:intergenic | 25.0% |
| ! | TATTTCATGCCTTAATTCTT+TGG | + | chr5.1:506583-506602 | MS.gene92340:intron | 25.0% |
| ! | TCACCAACTATTATAACTTT+GGG | + | chr5.1:506297-506316 | MS.gene92340:intron | 25.0% |
| ! | TTCACCAACTATTATAACTT+TGG | + | chr5.1:506296-506315 | MS.gene92340:intron | 25.0% |
| ! | TTCCAATATCAAAAAACTGT+AGG | - | chr5.1:508714-508733 | None:intergenic | 25.0% |
| ! | TTGTGTGTATAAAATGATCA+AGG | + | chr5.1:507814-507833 | MS.gene92340:CDS | 25.0% |
| ! | TTTCCCAAAGTTATAATAGT+TGG | - | chr5.1:506303-506322 | None:intergenic | 25.0% |
| !! | AACTATTATAACTTTGGGAA+AGG | + | chr5.1:506302-506321 | MS.gene92340:intron | 25.0% |
| !! | ACTTTGTCCTAATTTTTGTT+AGG | - | chr5.1:508211-508230 | None:intergenic | 25.0% |
| !! | CTGATAATGTGTTTCAATAT+AGG | + | chr5.1:508648-508667 | MS.gene92340:intron | 25.0% |
| !! | CTTTGTCCTAATTTTTGTTA+GGG | - | chr5.1:508210-508229 | None:intergenic | 25.0% |
| !! | GTTTCCTTTTTATCAAAATG+GGG | + | chr5.1:507178-507197 | MS.gene92340:intron | 25.0% |
| !! | TCTTTTATCAAACGTATTGT+TGG | + | chr5.1:505987-506006 | MS.gene92340:CDS | 25.0% |
| !!! | ACAGTTTTTTGTGATGATAT+CGG | - | chr5.1:507532-507551 | None:intergenic | 25.0% |
| !!! | ACATGATTTGTTTTTACTAC+TGG | + | chr5.1:507284-507303 | MS.gene92340:intron | 25.0% |
| !!! | ATGGCTTTTTCAAGAATAAA+AGG | - | chr5.1:506062-506081 | None:intergenic | 25.0% |
| !!! | ATTTTTAGTTTAGCATCAGT+CGG | - | chr5.1:507991-508010 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTCACACAAATTA+AGG | - | chr5.1:508311-508330 | None:intergenic | 25.0% |
| !!! | TAGCAGCAATAGTATTTTAA+TGG | + | chr5.1:508425-508444 | MS.gene92340:intron | 25.0% |
| !!! | TGGAATTTTTTGCTCAAATT+GGG | + | chr5.1:507249-507268 | MS.gene92340:intron | 25.0% |
| !!! | TGTAAAGCCATTTTCTTTAT+AGG | + | chr5.1:505889-505908 | MS.gene92340:intron | 25.0% |
| !!! | TTCCTACAGTTTTTTGATAT+TGG | + | chr5.1:508709-508728 | MS.gene92340:CDS | 25.0% |
| !!! | TTGCTTTTCTTTATGCTTTT+TGG | + | chr5.1:505409-505428 | MS.gene92340:CDS | 25.0% |
| !!! | TTGGAATTTTTTGCTCAAAT+TGG | + | chr5.1:507248-507267 | MS.gene92340:intron | 25.0% |
| !!! | TTTTTTTATCTTTTGCCACT+CGG | + | chr5.1:505729-505748 | MS.gene92340:intron | 25.0% |
| AACTCTTTGACTCATTACAA+TGG | + | chr5.1:506658-506677 | MS.gene92340:intron | 30.0% | |
| AAGGAACTGAACTTGATTAA+TGG | + | chr5.1:506434-506453 | MS.gene92340:intron | 30.0% | |
| AAGTATATTACCGTGTTGAA+AGG | + | chr5.1:508359-508378 | MS.gene92340:intron | 30.0% | |
| AATGAGTCAAAGAGTTGAAA+AGG | - | chr5.1:506654-506673 | None:intergenic | 30.0% | |
| ACAGTTCCCTAACAAAAATT+AGG | + | chr5.1:508201-508220 | MS.gene92340:intron | 30.0% | |
| ACTCTTTGACTCATTACAAT+GGG | + | chr5.1:506659-506678 | MS.gene92340:intron | 30.0% | |
| AGGAACTGAACTTGATTAAT+GGG | + | chr5.1:506435-506454 | MS.gene92340:intron | 30.0% | |
| ATATGCTAGATTAAGGTTTC+TGG | + | chr5.1:507874-507893 | MS.gene92340:intron | 30.0% | |
| ATGAAAATGAACCAAACTTC+TGG | - | chr5.1:508245-508264 | None:intergenic | 30.0% | |
| ATGAGATTCAGACTAAAAGA+TGG | - | chr5.1:508608-508627 | None:intergenic | 30.0% | |
| ATGAGTCAAAGAGTTGAAAA+GGG | - | chr5.1:506653-506672 | None:intergenic | 30.0% | |
| ATTCCAATCATACTGAAACA+TGG | - | chr5.1:507235-507254 | None:intergenic | 30.0% | |
| ATTTCTGTAGCTTCTATATG+AGG | + | chr5.1:506836-506855 | MS.gene92340:intron | 30.0% | |
| CAAACTAATGTTTGTAATGG+TGG | + | chr5.1:507899-507918 | MS.gene92340:intron | 30.0% | |
| CAAGTTCAATCACATTAAGA+TGG | - | chr5.1:507661-507680 | None:intergenic | 30.0% | |
| CAATCTAGGAAATTTGAATG+TGG | - | chr5.1:506630-506649 | None:intergenic | 30.0% | |
| CATCTTAATGTGATTGAACT+TGG | + | chr5.1:507659-507678 | MS.gene92340:intron | 30.0% | |
| CCTGAATAAAGCTTATGATA+TGG | + | chr5.1:508109-508128 | MS.gene92340:intron | 30.0% | |
| GAAAATTATTCTCGCTCAAA+TGG | + | chr5.1:505671-505690 | MS.gene92340:CDS | 30.0% | |
| GAGTGGCAAAAGATAAAAAA+AGG | - | chr5.1:505730-505749 | None:intergenic | 30.0% | |
| GATATCATCACAAAAAACTG+TGG | + | chr5.1:507531-507550 | MS.gene92340:intron | 30.0% | |
| GCAAAAAACCAACTAACTAA+AGG | + | chr5.1:506803-506822 | MS.gene92340:intron | 30.0% | |
| GGACAAACTAATGTTTGTAA+TGG | + | chr5.1:507896-507915 | MS.gene92340:intron | 30.0% | |
| GGACTCTTATAAATAAGAGA+AGG | - | chr5.1:506609-506628 | None:intergenic | 30.0% | |
| GTATTAACTAGAAATTGAGC+AGG | + | chr5.1:506335-506354 | MS.gene92340:intron | 30.0% | |
| GTTGAATGTGAAGATATCAA+AGG | + | chr5.1:507416-507435 | MS.gene92340:intron | 30.0% | |
| TAAACAAAAACTGTGTACTG+AGG | + | chr5.1:506151-506170 | MS.gene92340:intron | 30.0% | |
| TAATGTGTTTCAATATAGGC+TGG | + | chr5.1:508652-508671 | MS.gene92340:intron | 30.0% | |
| TAGTGGTTTATGTGTTTAGT+TGG | + | chr5.1:506241-506260 | MS.gene92340:intron | 30.0% | |
| TATACTTATCATCCTTGTCA+CGG | - | chr5.1:508689-508708 | None:intergenic | 30.0% | |
| TATCATTACACCCATCAATA+AGG | - | chr5.1:506401-506420 | None:intergenic | 30.0% | |
| TATGCTAGATTAAGGTTTCT+GGG | + | chr5.1:507875-507894 | MS.gene92340:intron | 30.0% | |
| TATTGGATATTCAGAGAGAT+TGG | + | chr5.1:507134-507153 | MS.gene92340:intron | 30.0% | |
| TGAAAATGAACCAAACTTCT+GGG | - | chr5.1:508244-508263 | None:intergenic | 30.0% | |
| TTACCATGTTTCAGTATGAT+TGG | + | chr5.1:507229-507248 | MS.gene92340:intron | 30.0% | |
| TTGCATTGTAGAATAGATGA+TGG | + | chr5.1:508769-508788 | MS.gene92340:CDS | 30.0% | |
| TTTCTTTACTATGCCTCAAT+TGG | + | chr5.1:505473-505492 | MS.gene92340:CDS | 30.0% | |
| ! | AAAAGGATTGCCTTATTGAT+GGG | + | chr5.1:506388-506407 | MS.gene92340:intron | 30.0% |
| ! | AAATGACATACTCTTTAGAG+AGG | - | chr5.1:505172-505191 | None:intergenic | 30.0% |
| ! | AATAACGCTTGAGTTTTTCA+AGG | + | chr5.1:506266-506285 | MS.gene92340:intron | 30.0% |
| ! | ACAAGTTTGAGTTATGGAAT+CGG | + | chr5.1:506999-507018 | MS.gene92340:intron | 30.0% |
| ! | AGCTTTTCGTTAGGTATAAA+TGG | + | chr5.1:507927-507946 | MS.gene92340:intron | 30.0% |
| ! | GATGATTTGCATTTATGTAG+TGG | + | chr5.1:506224-506243 | MS.gene92340:intron | 30.0% |
| !! | CCATATCATAAGCTTTATTC+AGG | - | chr5.1:508112-508131 | None:intergenic | 30.0% |
| !! | CTTTATGCTTTTTGGAGAAT+GGG | + | chr5.1:505417-505436 | MS.gene92340:CDS | 30.0% |
| !! | TCTTTATGCTTTTTGGAGAA+TGG | + | chr5.1:505416-505435 | MS.gene92340:CDS | 30.0% |
| !!! | GAATTTTTTGCTCAAATTGG+GGG | + | chr5.1:507251-507270 | MS.gene92340:intron | 30.0% |
| !!! | GGAATTTTTTGCTCAAATTG+GGG | + | chr5.1:507250-507269 | MS.gene92340:intron | 30.0% |
| AACTAGAAATTGAGCAGGAA+GGG | + | chr5.1:506340-506359 | MS.gene92340:intron | 35.0% | |
| AAGAAACCTTTATCAGGTGA+TGG | - | chr5.1:505459-505478 | None:intergenic | 35.0% | |
| AAGAGAAGGCCAAAGAATTA+AGG | - | chr5.1:506595-506614 | None:intergenic | 35.0% | |
| AAGTTTGTGTTCACTTGGTT+GGG | + | chr5.1:505010-505029 | MS.gene92340:CDS | 35.0% | |
| ATACTTATCATCCTTGTCAC+GGG | - | chr5.1:508688-508707 | None:intergenic | 35.0% | |
| ATGTGAAGATATCAAAGGCA+TGG | + | chr5.1:507421-507440 | MS.gene92340:intron | 35.0% | |
| ATTTGCATGATTGAAAGGGA+CGG | - | chr5.1:507204-507223 | None:intergenic | 35.0% | |
| CAATCACATTAAGATGGAGT+TGG | - | chr5.1:507655-507674 | None:intergenic | 35.0% | |
| CACATGAAAGTAACTGCTAA+AGG | - | chr5.1:506968-506987 | None:intergenic | 35.0% | |
| CATCTATTCTACAATGCAAC+TGG | - | chr5.1:508768-508787 | None:intergenic | 35.0% | |
| CTTTGCAATGACTGCAAAAA+AGG | - | chr5.1:508512-508531 | None:intergenic | 35.0% | |
| GAAAATGGTTTCAACTATGC+AGG | + | chr5.1:507721-507740 | MS.gene92340:intron | 35.0% | |
| GAAATTCTCGCAGAAACAAA+AGG | + | chr5.1:506371-506390 | MS.gene92340:intron | 35.0% | |
| GAACAGGAACACAAAGTAAA+AGG | - | chr5.1:505924-505943 | None:intergenic | 35.0% | |
| GACACTAACCTGAGATAATA+AGG | - | chr5.1:508746-508765 | None:intergenic | 35.0% | |
| GCTTTCAAAGCAATTGTTCT+TGG | + | chr5.1:507469-507488 | MS.gene92340:CDS | 35.0% | |
| GGAACTGAACTTGATTAATG+GGG | + | chr5.1:506436-506455 | MS.gene92340:intron | 35.0% | |
| GTTGGAAAATAACTCAGTCT+TGG | - | chr5.1:506727-506746 | None:intergenic | 35.0% | |
| TAACTAGAAATTGAGCAGGA+AGG | + | chr5.1:506339-506358 | MS.gene92340:intron | 35.0% | |
| TACTTGATGCTTAAAAGCAG+TGG | + | chr5.1:505342-505361 | MS.gene92340:CDS | 35.0% | |
| TAGACATGCCTTTAGTTAGT+TGG | - | chr5.1:506814-506833 | None:intergenic | 35.0% | |
| TCAGGTTCAGATTTATGAGT+TGG | - | chr5.1:508094-508113 | None:intergenic | 35.0% | |
| TTAGGAAGTTTGTGTTCACT+TGG | + | chr5.1:505005-505024 | MS.gene92340:CDS | 35.0% | |
| TTCGTTAGGTATAAATGGCT+CGG | + | chr5.1:507932-507951 | MS.gene92340:intron | 35.0% | |
| TTTGCTCGTCAGTTAGTAAA+CGG | - | chr5.1:506788-506807 | None:intergenic | 35.0% | |
| ! | ACATACTCTTTAGAGAGGAT+GGG | - | chr5.1:505167-505186 | None:intergenic | 35.0% |
| ! | CAAAAGGATTGCCTTATTGA+TGG | + | chr5.1:506387-506406 | MS.gene92340:intron | 35.0% |
| ! | CAGATTTATGAGTTGGAACT+TGG | - | chr5.1:508087-508106 | None:intergenic | 35.0% |
| ! | GCGTTGACCTTTAAAAAAAC+TGG | + | chr5.1:507553-507572 | MS.gene92340:intron | 35.0% |
| ! | TGTTCATATTTTCAGCCACA+TGG | - | chr5.1:508158-508177 | None:intergenic | 35.0% |
| ! | TTTCAGCCACATGGATATTT+TGG | - | chr5.1:508149-508168 | None:intergenic | 35.0% |
| !! | AAATGCAGCCTTATTATCTC+AGG | + | chr5.1:508735-508754 | MS.gene92340:CDS | 35.0% |
| !! | AACAAAAGGCTTTGAAGTTG+GGG | + | chr5.1:506933-506952 | MS.gene92340:intron | 35.0% |
| !! | CAACAAAAGGCTTTGAAGTT+GGG | + | chr5.1:506932-506951 | MS.gene92340:intron | 35.0% |
| !! | TTCAAAGCCTTTTGTTGCTT+TGG | - | chr5.1:506929-506948 | None:intergenic | 35.0% |
| !!! | GCAAAGTGTTGTTTTCAAAC+AGG | + | chr5.1:508526-508545 | MS.gene92340:CDS | 35.0% |
| AAACTTGTGCTATCCAGTCA+TGG | - | chr5.1:507103-507122 | None:intergenic | 40.0% | |
| ACTATGTTGTGACACCTGTA+CGG | + | chr5.1:508396-508415 | MS.gene92340:intron | 40.0% | |
| ACTCTTCATCAGAGAGATTG+AGG | + | chr5.1:505581-505600 | MS.gene92340:CDS | 40.0% | |
| AGAGTTGAAAAGGGCAATCT+AGG | - | chr5.1:506644-506663 | None:intergenic | 40.0% | |
| AGGCAGAATAAGTAGACAGT+TGG | - | chr5.1:506745-506764 | None:intergenic | 40.0% | |
| AGGTTGCCTACAATAACTCA+TGG | + | chr5.1:507042-507061 | MS.gene92340:intron | 40.0% | |
| AGTTCAGATGAAGCTAGAAC+AGG | - | chr5.1:505940-505959 | None:intergenic | 40.0% | |
| ATGAGCTCCAAAGCAACAAA+AGG | + | chr5.1:506919-506938 | MS.gene92340:intron | 40.0% | |
| CCAATTCTACTGACCAATTG+AGG | - | chr5.1:505489-505508 | None:intergenic | 40.0% | |
| CCTAGTGTGACACTCATAAT+AGG | + | chr5.1:508329-508348 | MS.gene92340:intron | 40.0% | |
| CCTATTATGAGTGTCACACT+AGG | - | chr5.1:508332-508351 | None:intergenic | 40.0% | |
| CCTCAATTGGTCAGTAGAAT+TGG | + | chr5.1:505486-505505 | MS.gene92340:CDS | 40.0% | |
| CCTCTTGTAAATGCAAGACA+AGG | + | chr5.1:507022-507041 | MS.gene92340:intron | 40.0% | |
| CCTTGTCTTGCATTTACAAG+AGG | - | chr5.1:507025-507044 | None:intergenic | 40.0% | |
| CTCAACTGAACCTTTCAACA+CGG | - | chr5.1:508372-508391 | None:intergenic | 40.0% | |
| CTGCATAAGTTGTCTTTCCA+AGG | - | chr5.1:505622-505641 | None:intergenic | 40.0% | |
| CTTATGCAGTCAATTGAGAC+TGG | + | chr5.1:505633-505652 | MS.gene92340:CDS | 40.0% | |
| GAAGTTTGTGTTCACTTGGT+TGG | + | chr5.1:505009-505028 | MS.gene92340:CDS | 40.0% | |
| GCATATTCTCGAACTTGGAA+AGG | + | chr5.1:507752-507771 | MS.gene92340:CDS | 40.0% | |
| GGACATATGCAGAATCTACT+AGG | + | chr5.1:507773-507792 | MS.gene92340:CDS | 40.0% | |
| GTGTGACACTCATAATAGGA+CGG | + | chr5.1:508333-508352 | MS.gene92340:intron | 40.0% | |
| GTTAGGAGGTGACTATAGAT+AGG | - | chr5.1:506765-506784 | None:intergenic | 40.0% | |
| TATTCTCGCTCAAATGGAGA+TGG | + | chr5.1:505677-505696 | MS.gene92340:CDS | 40.0% | |
| TCAGTCGGCAAATAGATTGT+TGG | - | chr5.1:507976-507995 | None:intergenic | 40.0% | |
| TGACTCATTACAATGGGTCT+CGG | + | chr5.1:506665-506684 | MS.gene92340:intron | 40.0% | |
| TGTAGCTTCTATATGAGGCT+TGG | + | chr5.1:506841-506860 | MS.gene92340:intron | 40.0% | |
| TGTAGGCCATGAGTTATTGT+AGG | - | chr5.1:507051-507070 | None:intergenic | 40.0% | |
| TTGCTCGTCAGTTAGTAAAC+GGG | - | chr5.1:506787-506806 | None:intergenic | 40.0% | |
| TTGGAAGGTTCAGTTGTGTT+AGG | + | chr5.1:504987-505006 | MS.gene92340:CDS | 40.0% | |
| ! | GACATACTCTTTAGAGAGGA+TGG | - | chr5.1:505168-505187 | None:intergenic | 40.0% |
| ! | GAGGTCACAAGTTTGAGTTA+TGG | + | chr5.1:506993-507012 | MS.gene92340:intron | 40.0% |
| !! | ACGGCCCCATTTTGATAAAA+AGG | - | chr5.1:507185-507204 | None:intergenic | 40.0% |
| !! | ATGGCTGTTCTATCTGGTTT+TGG | + | chr5.1:505528-505547 | MS.gene92340:CDS | 40.0% |
| !! | GCAACAAAAGGCTTTGAAGT+TGG | + | chr5.1:506931-506950 | MS.gene92340:intron | 40.0% |
| !! | GTCAGTAGAATTGGTGTCAT+TGG | + | chr5.1:505495-505514 | MS.gene92340:CDS | 40.0% |
| !! | TCTGAACTTGTTTTTCGCAG+AGG | + | chr5.1:505952-505971 | MS.gene92340:intron | 40.0% |
| !! | TGTCATTGGTGTTACTGTCA+TGG | + | chr5.1:505509-505528 | MS.gene92340:CDS | 40.0% |
| ACAGATTGCACCCAGAAGTT+TGG | + | chr5.1:508231-508250 | MS.gene92340:intron | 45.0% | |
| ACTCAAACTTGTGACCTCCT+AGG | - | chr5.1:506991-507010 | None:intergenic | 45.0% | |
| ACTGTCATGGCTGTTCTATC+TGG | + | chr5.1:505522-505541 | MS.gene92340:CDS | 45.0% | |
| AGAACTGAAAGAGCTGCACT+TGG | + | chr5.1:505369-505388 | MS.gene92340:CDS | 45.0% | |
| ATAGGGCAAGAGTTGTGAAC+TGG | + | chr5.1:505259-505278 | MS.gene92340:intron | 45.0% | |
| ATGGAGATGGAGAACAAGCA+AGG | + | chr5.1:505690-505709 | MS.gene92340:CDS | 45.0% | |
| ATTGAGCAGGAAGGGAAGAA+AGG | + | chr5.1:506348-506367 | MS.gene92340:intron | 45.0% | |
| CCAATGCCATCACCTGATAA+AGG | + | chr5.1:505450-505469 | MS.gene92340:CDS | 45.0% | |
| CGTGTTGAAAGGTTCAGTTG+AGG | + | chr5.1:508370-508389 | MS.gene92340:intron | 45.0% | |
| CTATGAGCTTCGACAAGCAA+AGG | + | chr5.1:507496-507515 | MS.gene92340:CDS | 45.0% | |
| CTGCTGCATATTCTCGAACT+TGG | + | chr5.1:507747-507766 | MS.gene92340:CDS | 45.0% | |
| GAAACTAACCTTGCTCCTTC+TGG | - | chr5.1:506040-506059 | None:intergenic | 45.0% | |
| GAACAAGCAAGGATCTGAAG+AGG | + | chr5.1:505701-505720 | MS.gene92340:CDS | 45.0% | |
| GATTGAGGAAACCGAGATCA+AGG | + | chr5.1:505596-505615 | MS.gene92340:CDS | 45.0% | |
| TCTTTCCAAGGCCTTGATCT+CGG | - | chr5.1:505610-505629 | None:intergenic | 45.0% | |
| TGACACTCATAATAGGACGG+AGG | + | chr5.1:508336-508355 | MS.gene92340:intron | 45.0% | |
| TGCTGCTAATATCACCGTAC+AGG | - | chr5.1:508413-508432 | None:intergenic | 45.0% | |
| TTACAATGGGTCTCGGTCAA+TGG | + | chr5.1:506672-506691 | MS.gene92340:intron | 45.0% | |
| TTGAGCAGGAAGGGAAGAAA+GGG | + | chr5.1:506349-506368 | MS.gene92340:intron | 45.0% | |
| TTGTGCTATCCAGTCATGGT+GGG | - | chr5.1:507099-507118 | None:intergenic | 45.0% | |
| ! | AATGGCTCGGAAGCAAAGTA+TGG | + | chr5.1:507945-507964 | MS.gene92340:intron | 45.0% |
| ! | CCTTTATCAGGTGATGGCAT+TGG | - | chr5.1:505453-505472 | None:intergenic | 45.0% |
| ! | CGTCAGTTAGTAAACGGGTT+AGG | - | chr5.1:506782-506801 | None:intergenic | 45.0% |
| ! | GAGGCTTGGTTAGTGTTCAT+GGG | + | chr5.1:506855-506874 | MS.gene92340:intron | 45.0% |
| ! | GCAGTTACTTTCATGTGCCT+AGG | + | chr5.1:506971-506990 | MS.gene92340:intron | 45.0% |
| ! | GTTACTTTCATGTGCCTAGG+AGG | + | chr5.1:506974-506993 | MS.gene92340:intron | 45.0% |
| ! | TATCAAAGGCATGGAAGCAG+AGG | + | chr5.1:507430-507449 | MS.gene92340:CDS | 45.0% |
| ! | TCTAAAGCAGGCGCTTCAAA+TGG | - | chr5.1:506081-506100 | None:intergenic | 45.0% |
| ! | TGAGGCTTGGTTAGTGTTCA+TGG | + | chr5.1:506854-506873 | MS.gene92340:intron | 45.0% |
| ! | TTTGCCACTCGGCATGTTTT+TGG | + | chr5.1:505740-505759 | MS.gene92340:intron | 45.0% |
| ! | TTTGGAGCTCATACTGTAGC+GGG | - | chr5.1:506911-506930 | None:intergenic | 45.0% |
| !! | CAGTTAGTAAACGGGTTAGG+AGG | - | chr5.1:506779-506798 | None:intergenic | 45.0% |
| !! | CTTTGGAGCTCATACTGTAG+CGG | - | chr5.1:506912-506931 | None:intergenic | 45.0% |
| !!! | GTGGACTAGAGCTTTTCGTT+AGG | + | chr5.1:507918-507937 | MS.gene92340:intron | 45.0% |
| !!! | TACAAATTTTTAAATTTTTT+TGG | + | chr5.1:507394-507413 | MS.gene92340:intron | 5.0% |
| AGTTGTTCGATCCGTGCAAG+AGG | + | chr5.1:506013-506032 | MS.gene92340:CDS | 50.0% | |
| CTTGTGCTATCCAGTCATGG+TGG | - | chr5.1:507100-507119 | None:intergenic | 50.0% | |
| GAAGGGTCGGACATATCTGT+AGG | - | chr5.1:507068-507087 | None:intergenic | 50.0% | |
| GAGTCCAAAAACATGCCGAG+TGG | - | chr5.1:505747-505766 | None:intergenic | 50.0% | |
| GTTCAGTTGATCCCGTGACA+AGG | + | chr5.1:508674-508693 | MS.gene92340:CDS | 50.0% | |
| TGGGGAAGAGGAATCTTGGA+AGG | + | chr5.1:504972-504991 | MS.gene92340:CDS | 50.0% | |
| TGTGCTATCCAGTCATGGTG+GGG | - | chr5.1:507098-507117 | None:intergenic | 50.0% | |
| TTGTGTTCACTTGGTTGGGC+AGG | + | chr5.1:505014-505033 | MS.gene92340:CDS | 50.0% | |
| !! | AAGGCTTTGAAGTTGGGGTG+TGG | + | chr5.1:506938-506957 | MS.gene92340:intron | 50.0% |
| !! | AGGCTTTGAAGTTGGGGTGT+GGG | + | chr5.1:506939-506958 | MS.gene92340:intron | 50.0% |
| !! | CTCATACTGTAGCGGGTCTA+GGG | - | chr5.1:506904-506923 | None:intergenic | 50.0% |
| ATCCGTGCAAGAGGACCAGA+AGG | + | chr5.1:506022-506041 | MS.gene92340:CDS | 55.0% | |
| CAAGAGGACCAGAAGGAGCA+AGG | + | chr5.1:506029-506048 | MS.gene92340:CDS | 55.0% | |
| CACTTGGTTGGGCAGGTGTT+TGG | + | chr5.1:505021-505040 | MS.gene92340:CDS | 55.0% | |
| CTCCTTCTGGTCCTCTTGCA+CGG | - | chr5.1:506027-506046 | None:intergenic | 55.0% | |
| GGAAACCGAGATCAAGGCCT+TGG | + | chr5.1:505602-505621 | MS.gene92340:CDS | 55.0% | |
| GGGTTGGGGAAGAGGAATCT+TGG | + | chr5.1:504968-504987 | MS.gene92340:CDS | 55.0% | |
| GTGCTATCCAGTCATGGTGG+GGG | - | chr5.1:507097-507116 | None:intergenic | 55.0% | |
| ! | AGGCATGGAAGCAGAGGTAC+TGG | + | chr5.1:507436-507455 | MS.gene92340:CDS | 55.0% |
| ! | CATGGTGGGGGTCTAGAGAA+GGG | - | chr5.1:507085-507104 | None:intergenic | 55.0% |
| ! | TCATGGTGGGGGTCTAGAGA+AGG | - | chr5.1:507086-507105 | None:intergenic | 55.0% |
| !! | ACTGTAGCGGGTCTAGGGAA+GGG | - | chr5.1:506899-506918 | None:intergenic | 55.0% |
| !! | GCTCATACTGTAGCGGGTCT+AGG | - | chr5.1:506905-506924 | None:intergenic | 55.0% |
| !! | GGCTTTGAAGTTGGGGTGTG+GGG | + | chr5.1:506940-506959 | MS.gene92340:intron | 55.0% |
| !! | TACTGTAGCGGGTCTAGGGA+AGG | - | chr5.1:506900-506919 | None:intergenic | 55.0% |
| CTCTAGACCCCCACCATGAC+TGG | + | chr5.1:507087-507106 | MS.gene92340:intron | 60.0% | |
| GTGGGGGTCTAGAGAAGGGT+CGG | - | chr5.1:507081-507100 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 504966 | 508807 | 504966 | ID=MS.gene92340 |
| chr5.1 | mRNA | 504966 | 508807 | 504966 | ID=MS.gene92340.t1;Parent=MS.gene92340 |
| chr5.1 | exon | 504966 | 505180 | 504966 | ID=MS.gene92340.t1.exon1;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 504966 | 505180 | 504966 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 505263 | 505722 | 505263 | ID=MS.gene92340.t1.exon2;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 505263 | 505722 | 505263 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 505972 | 506050 | 505972 | ID=MS.gene92340.t1.exon3;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 505972 | 506050 | 505972 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 507429 | 507517 | 507429 | ID=MS.gene92340.t1.exon4;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 507429 | 507517 | 507429 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 507743 | 507835 | 507743 | ID=MS.gene92340.t1.exon5;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 507743 | 507835 | 507743 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 508521 | 508547 | 508521 | ID=MS.gene92340.t1.exon6;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 508521 | 508547 | 508521 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| chr5.1 | exon | 508670 | 508807 | 508670 | ID=MS.gene92340.t1.exon7;Parent=MS.gene92340.t1 |
| chr5.1 | CDS | 508670 | 508807 | 508670 | ID=cds.MS.gene92340.t1;Parent=MS.gene92340.t1 |
| Gene Sequence |
| Protein sequence |
