Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007112.01.T01 | XP_024631348.1 | 88.796 | 357 | 0 | 1 | 1 | 317 | 1 | 357 | 0 | 639 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007112.01.T01 | Q7XJ53 | 64.183 | 349 | 80 | 3 | 1 | 306 | 1 | 347 | 2.67E-148 | 423 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007112.01.T01 | A0A072V4H9 | 88.796 | 357 | 0 | 1 | 1 | 317 | 1 | 357 | 0.0 | 639 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048773.01 | MsG0280007112.01 | 0.807038 | 6.143460e-50 | 3.386415e-47 |
MsG0080048802.01 | MsG0280007112.01 | 0.805893 | 1.071581e-49 | 5.735880e-47 |
MsG0080048878.01 | MsG0280007112.01 | 0.820143 | 8.015461e-53 | 6.291108e-50 |
MsG0080049040.01 | MsG0280007112.01 | 0.809251 | 2.075307e-50 | 1.212451e-47 |
MsG0080049068.01 | MsG0280007112.01 | 0.831932 | 1.260920e-55 | 1.388666e-52 |
MsG0180000354.01 | MsG0280007112.01 | 0.804302 | 2.306300e-49 | 1.184979e-46 |
MsG0180000355.01 | MsG0280007112.01 | 0.837780 | 4.245954e-57 | 5.574470e-54 |
MsG0180000785.01 | MsG0280007112.01 | 0.811186 | 7.940873e-51 | 4.882818e-48 |
MsG0180001085.01 | MsG0280007112.01 | 0.833380 | 5.513794e-56 | 6.339106e-53 |
MsG0180001270.01 | MsG0280007112.01 | 0.808242 | 3.409257e-50 | 1.939414e-47 |
MsG0180003353.01 | MsG0280007112.01 | 0.843730 | 1.170383e-58 | 1.848121e-55 |
MsG0180003821.01 | MsG0280007112.01 | 0.844622 | 6.745981e-59 | 1.095409e-55 |
MsG0180004046.01 | MsG0280007112.01 | 0.812208 | 4.758071e-51 | 3.006691e-48 |
MsG0180004103.01 | MsG0280007112.01 | 0.804692 | 1.911857e-49 | 9.922567e-47 |
MsG0180004192.01 | MsG0280007112.01 | 0.805567 | 1.254561e-49 | 6.659081e-47 |
MsG0180004276.01 | MsG0280007112.01 | 0.811034 | 8.564675e-51 | 5.245677e-48 |
MsG0180004448.01 | MsG0280007112.01 | 0.846188 | 2.540924e-59 | 4.337844e-56 |
MsG0180004493.01 | MsG0280007112.01 | 0.825658 | 4.156887e-54 | 3.812829e-51 |
MsG0180004735.01 | MsG0280007112.01 | 0.809876 | 1.523212e-50 | 9.047698e-48 |
MsG0180004759.01 | MsG0280007112.01 | -0.815940 | 7.144657e-52 | 4.993959e-49 |
MsG0180005349.01 | MsG0280007112.01 | 0.815650 | 8.291274e-52 | 5.750103e-49 |
MsG0180005418.01 | MsG0280007112.01 | 0.810775 | 9.746080e-51 | 5.928078e-48 |
MsG0180005807.01 | MsG0280007112.01 | 0.804319 | 2.287480e-49 | 1.175801e-46 |
MsG0180006031.01 | MsG0280007112.01 | 0.818444 | 1.953996e-52 | 1.463044e-49 |
MsG0180006096.01 | MsG0280007112.01 | 0.809075 | 2.263976e-50 | 1.316415e-47 |
MsG0280006306.01 | MsG0280007112.01 | -0.816722 | 4.775542e-52 | 3.410283e-49 |
MsG0280006309.01 | MsG0280007112.01 | 0.802757 | 4.820415e-49 | 2.380626e-46 |
MsG0280006418.01 | MsG0280007112.01 | -0.809218 | 2.108836e-50 | 1.230966e-47 |
MsG0280007062.01 | MsG0280007112.01 | 0.841303 | 5.155888e-58 | 7.543397e-55 |
MsG0280007112.01 | MsG0280008928.01 | 0.819936 | 8.936106e-53 | 6.973169e-50 |
MsG0280007112.01 | MsG0280008929.01 | 0.811213 | 7.832298e-51 | 4.819635e-48 |
MsG0280007112.01 | MsG0280009685.01 | 0.845780 | 3.279528e-59 | 5.526860e-56 |
MsG0280007112.01 | MsG0280009708.01 | 0.818573 | 1.826857e-52 | 1.372533e-49 |
MsG0280007112.01 | MsG0280010271.01 | 0.808439 | 3.096023e-50 | 1.770335e-47 |
MsG0280007112.01 | MsG0280010503.01 | 0.825957 | 3.530439e-54 | 3.266001e-51 |
MsG0280007112.01 | MsG0280010564.01 | 0.818039 | 2.413712e-52 | 1.786897e-49 |
MsG0280007112.01 | MsG0280010926.01 | 0.800337 | 1.511142e-48 | 7.018391e-46 |
MsG0280007112.01 | MsG0380014584.01 | 0.802717 | 4.913638e-49 | 2.424194e-46 |
MsG0280007112.01 | MsG0380015352.01 | 0.818062 | 2.383973e-52 | 1.766062e-49 |
MsG0280007112.01 | MsG0380015438.01 | 0.806040 | 9.975929e-50 | 5.360071e-47 |
MsG0280007112.01 | MsG0380015603.01 | 0.811930 | 5.470972e-51 | 3.430867e-48 |
MsG0280007112.01 | MsG0380016192.01 | 0.803649 | 3.151720e-49 | 1.592385e-46 |
MsG0280007112.01 | MsG0380016194.01 | 0.807901 | 4.030945e-50 | 2.272268e-47 |
MsG0280007112.01 | MsG0380016284.01 | 0.826586 | 2.500526e-54 | 2.354798e-51 |
MsG0280007112.01 | MsG0380016671.01 | 0.820809 | 5.636146e-53 | 4.505923e-50 |
MsG0280007112.01 | MsG0380016864.01 | 0.805488 | 1.303063e-49 | 6.902738e-47 |
MsG0280007112.01 | MsG0380017087.01 | 0.825314 | 5.014315e-54 | 4.554505e-51 |
MsG0280007112.01 | MsG0380018037.01 | 0.834365 | 3.126702e-56 | 3.702548e-53 |
MsG0280007112.01 | MsG0480018584.01 | 0.835889 | 1.290252e-56 | 1.599239e-53 |
MsG0280007112.01 | MsG0480018911.01 | 0.841293 | 5.189179e-58 | 7.589571e-55 |
MsG0280007112.01 | MsG0480019007.01 | 0.822039 | 2.932380e-53 | 2.426423e-50 |
MsG0280007112.01 | MsG0480019408.01 | 0.804525 | 2.072082e-49 | 1.070708e-46 |
MsG0280007112.01 | MsG0480020690.01 | 0.844226 | 8.622100e-59 | 1.382797e-55 |
MsG0280007112.01 | MsG0480022401.01 | 0.820923 | 5.307705e-53 | 4.256796e-50 |
MsG0280007112.01 | MsG0480022537.01 | 0.806098 | 9.702660e-50 | 5.220803e-47 |
MsG0280007112.01 | MsG0480022624.01 | 0.818031 | 2.423367e-52 | 1.793657e-49 |
MsG0280007112.01 | MsG0480022643.01 | 0.821365 | 4.197938e-53 | 3.408209e-50 |
MsG0280007112.01 | MsG0480022647.01 | 0.818752 | 1.663485e-52 | 1.256019e-49 |
MsG0280007112.01 | MsG0480023367.01 | 0.802688 | 4.981720e-49 | 2.455891e-46 |
MsG0280007112.01 | MsG0480023384.01 | 0.826387 | 2.789100e-54 | 2.612023e-51 |
MsG0280007112.01 | MsG0480023389.01 | 0.812920 | 3.325402e-51 | 2.141280e-48 |
MsG0280007112.01 | MsG0480023867.01 | 0.823353 | 1.449918e-53 | 1.245331e-50 |
MsG0280007112.01 | MsG0480023877.01 | 0.804387 | 2.213472e-49 | 1.139764e-46 |
MsG0280007112.01 | MsG0480023992.01 | 0.809557 | 1.784266e-50 | 1.050918e-47 |
MsG0280007112.01 | MsG0580024873.01 | 0.800992 | 1.111099e-48 | 5.247199e-46 |
MsG0280007112.01 | MsG0580025055.01 | 0.813692 | 2.250753e-51 | 1.479997e-48 |
MsG0280007112.01 | MsG0580026206.01 | 0.802890 | 4.526086e-49 | 2.242797e-46 |
MsG0280007112.01 | MsG0580027394.01 | 0.804351 | 2.252326e-49 | 1.158711e-46 |
MsG0280007112.01 | MsG0580027655.01 | 0.830684 | 2.556795e-55 | 2.713353e-52 |
MsG0280007112.01 | MsG0580027826.01 | 0.827616 | 1.418034e-54 | 1.375903e-51 |
MsG0280007112.01 | MsG0580028024.01 | 0.820125 | 8.093133e-53 | 6.349043e-50 |
MsG0280007112.01 | MsG0580028033.01 | 0.819646 | 1.041429e-52 | 8.060521e-50 |
MsG0280007112.01 | MsG0580028059.01 | 0.810744 | 9.900129e-51 | 6.016725e-48 |
MsG0280007112.01 | MsG0580029529.01 | 0.804070 | 2.577181e-49 | 1.316358e-46 |
MsG0280007112.01 | MsG0580029734.01 | 0.804570 | 2.027411e-49 | 1.048900e-46 |
MsG0280007112.01 | MsG0580030010.01 | 0.825550 | 4.410020e-54 | 4.032433e-51 |
MsG0280007112.01 | MsG0680030515.01 | 0.802159 | 6.404293e-49 | 3.114920e-46 |
MsG0280007112.01 | MsG0680030784.01 | 0.800115 | 1.676497e-48 | 7.742342e-46 |
MsG0280007112.01 | MsG0680030858.01 | 0.821094 | 4.846166e-53 | 3.905345e-50 |
MsG0280007112.01 | MsG0680031010.01 | 0.830021 | 3.713109e-55 | 3.865064e-52 |
MsG0280007112.01 | MsG0680031469.01 | 0.830334 | 3.113870e-55 | 3.270927e-52 |
MsG0280007112.01 | MsG0680031621.01 | 0.803338 | 3.656965e-49 | 1.832929e-46 |
MsG0280007112.01 | MsG0680031939.01 | 0.824614 | 7.337882e-54 | 6.533513e-51 |
MsG0280007112.01 | MsG0680032827.01 | 0.831187 | 1.923982e-55 | 2.072340e-52 |
MsG0280007112.01 | MsG0680032830.01 | 0.826616 | 2.460082e-54 | 2.318828e-51 |
MsG0280007112.01 | MsG0680033377.01 | 0.849413 | 3.286513e-60 | 6.224958e-57 |
MsG0280007112.01 | MsG0680034064.01 | 0.821341 | 4.250310e-53 | 3.448603e-50 |
MsG0280007112.01 | MsG0680035307.01 | 0.830184 | 3.386931e-55 | 3.542548e-52 |
MsG0280007112.01 | MsG0680035731.01 | 0.807730 | 4.382677e-50 | 2.459733e-47 |
MsG0280007112.01 | MsG0680035859.01 | 0.811474 | 6.875279e-51 | 4.260007e-48 |
MsG0280007112.01 | MsG0680035877.01 | 0.813907 | 2.017593e-51 | 1.334425e-48 |
MsG0280007112.01 | MsG0780036443.01 | 0.804031 | 2.626171e-49 | 1.339975e-46 |
MsG0280007112.01 | MsG0780036659.01 | 0.812631 | 3.847330e-51 | 2.458695e-48 |
MsG0280007112.01 | MsG0780037330.01 | 0.816567 | 5.175309e-52 | 3.680037e-49 |
MsG0280007112.01 | MsG0780039439.01 | 0.823413 | 1.404181e-53 | 1.208048e-50 |
MsG0280007112.01 | MsG0780039975.01 | 0.800706 | 1.270741e-48 | 5.957050e-46 |
MsG0280007112.01 | MsG0780040284.01 | 0.810814 | 9.558344e-51 | 5.819797e-48 |
MsG0280007112.01 | MsG0780040431.01 | 0.800967 | 1.124042e-48 | 5.304878e-46 |
MsG0280007112.01 | MsG0780041729.01 | -0.815152 | 1.070304e-51 | 7.321190e-49 |
MsG0280007112.01 | MsG0880041947.01 | 0.819021 | 1.445349e-52 | 1.099553e-49 |
MsG0280007112.01 | MsG0880043128.01 | 0.829183 | 5.935960e-55 | 6.030490e-52 |
MsG0280007112.01 | MsG0880044005.01 | 0.822580 | 2.195709e-53 | 1.845423e-50 |
MsG0280007112.01 | MsG0880044392.01 | 0.827021 | 1.969418e-54 | 1.878193e-51 |
MsG0280007112.01 | MsG0880044487.01 | 0.819479 | 1.136827e-52 | 8.758535e-50 |
MsG0280007112.01 | MsG0880045558.01 | 0.813044 | 3.123401e-51 | 2.017963e-48 |
MsG0280007112.01 | MsG0880046382.01 | 0.809402 | 1.925782e-50 | 1.129635e-47 |
MsG0280007112.01 | MsG0880046517.01 | 0.814103 | 1.827160e-51 | 1.214875e-48 |
MsG0280007112.01 | MsG0880046765.01 | 0.829987 | 3.784405e-55 | 3.935627e-52 |
MsG0280007112.01 | MsG0880046867.01 | 0.839305 | 1.715582e-57 | 2.359536e-54 |
MsG0280007112.01 | MsG0880047422.01 | -0.800023 | 1.750378e-48 | 8.064751e-46 |
MsG0280007112.01 | MsG0880047538.01 | 0.806509 | 7.946924e-50 | 4.321197e-47 |
MsG0280007112.01 | MsG0880047703.01 | 0.811887 | 5.590481e-51 | 3.501729e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007112.01.T01 | MTR_2g020970 | 88.796 | 357 | 0 | 1 | 1 | 317 | 1 | 357 | 0.0 | 639 |
MsG0280007112.01.T01 | MTR_2g020970 | 88.439 | 346 | 0 | 1 | 1 | 306 | 1 | 346 | 0.0 | 620 |
MsG0280007112.01.T01 | MTR_4g118340 | 64.162 | 346 | 83 | 2 | 1 | 306 | 1 | 345 | 2.25e-152 | 433 |
MsG0280007112.01.T01 | MTR_6g087000 | 55.921 | 304 | 91 | 3 | 43 | 303 | 80 | 383 | 3.43e-107 | 333 |
MsG0280007112.01.T01 | MTR_6g087000 | 55.921 | 304 | 91 | 3 | 43 | 303 | 80 | 383 | 5.43e-106 | 333 |
MsG0280007112.01.T01 | MTR_2g435550 | 31.878 | 229 | 129 | 6 | 85 | 306 | 137 | 345 | 1.12e-24 | 102 |
MsG0280007112.01.T01 | MTR_2g435550 | 31.878 | 229 | 129 | 6 | 85 | 306 | 151 | 359 | 1.36e-24 | 102 |
MsG0280007112.01.T01 | MTR_8g017240 | 37.356 | 174 | 88 | 4 | 108 | 280 | 163 | 316 | 1.59e-23 | 99.8 |
MsG0280007112.01.T01 | MTR_2g435550 | 34.595 | 185 | 97 | 4 | 85 | 265 | 151 | 315 | 6.05e-23 | 98.2 |
MsG0280007112.01.T01 | MTR_7g021530 | 33.654 | 208 | 112 | 5 | 82 | 283 | 109 | 296 | 6.82e-23 | 97.8 |
MsG0280007112.01.T01 | MTR_7g021530 | 33.654 | 208 | 112 | 5 | 82 | 283 | 159 | 346 | 9.40e-23 | 98.2 |
MsG0280007112.01.T01 | MTR_7g021530 | 33.654 | 208 | 112 | 5 | 82 | 283 | 200 | 387 | 1.60e-22 | 97.8 |
MsG0280007112.01.T01 | MTR_4g037470 | 29.084 | 251 | 154 | 8 | 57 | 303 | 142 | 372 | 2.96e-22 | 97.1 |
MsG0280007112.01.T01 | MTR_7g080170 | 33.889 | 180 | 99 | 4 | 85 | 262 | 74 | 235 | 2.99e-22 | 96.3 |
MsG0280007112.01.T01 | MTR_4g037470 | 29.084 | 251 | 154 | 8 | 57 | 303 | 151 | 381 | 3.68e-22 | 97.1 |
MsG0280007112.01.T01 | MTR_7g080170 | 29.114 | 237 | 145 | 6 | 85 | 316 | 182 | 400 | 4.17e-22 | 97.1 |
MsG0280007112.01.T01 | MTR_7g112490 | 31.429 | 210 | 122 | 4 | 99 | 304 | 191 | 382 | 7.14e-22 | 95.5 |
MsG0280007112.01.T01 | MTR_7g112490 | 31.429 | 210 | 122 | 4 | 99 | 304 | 173 | 364 | 7.85e-22 | 95.1 |
MsG0280007112.01.T01 | MTR_1g083690 | 30.769 | 234 | 134 | 8 | 75 | 299 | 134 | 348 | 2.14e-21 | 93.6 |
MsG0280007112.01.T01 | MTR_7g070510 | 28.019 | 207 | 126 | 3 | 84 | 285 | 158 | 346 | 2.17e-21 | 94.4 |
MsG0280007112.01.T01 | MTR_4g120410 | 31.220 | 205 | 115 | 5 | 85 | 284 | 150 | 333 | 2.76e-21 | 93.2 |
MsG0280007112.01.T01 | MTR_4g013295 | 31.156 | 199 | 116 | 4 | 89 | 284 | 144 | 324 | 9.29e-21 | 91.7 |
MsG0280007112.01.T01 | MTR_2g090190 | 30.045 | 223 | 134 | 6 | 85 | 303 | 161 | 365 | 1.00e-20 | 92.8 |
MsG0280007112.01.T01 | MTR_1g016620 | 32.184 | 174 | 99 | 3 | 90 | 262 | 132 | 287 | 1.06e-19 | 88.6 |
MsG0280007112.01.T01 | MTR_7g021530 | 33.333 | 180 | 96 | 4 | 82 | 255 | 159 | 320 | 1.03e-18 | 85.5 |
MsG0280007112.01.T01 | MTR_7g021530 | 33.333 | 180 | 96 | 4 | 82 | 255 | 200 | 361 | 1.93e-18 | 85.1 |
MsG0280007112.01.T01 | MTR_3g105730 | 29.661 | 236 | 123 | 10 | 82 | 313 | 76 | 272 | 1.18e-16 | 79.0 |
MsG0280007112.01.T01 | MTR_3g105730 | 29.661 | 236 | 123 | 10 | 82 | 313 | 98 | 294 | 2.20e-16 | 78.6 |
MsG0280007112.01.T01 | MTR_1g014640 | 29.412 | 221 | 117 | 8 | 82 | 301 | 141 | 323 | 3.10e-16 | 78.6 |
MsG0280007112.01.T01 | MTR_1g013400 | 29.412 | 221 | 117 | 8 | 82 | 301 | 141 | 323 | 3.10e-16 | 78.6 |
MsG0280007112.01.T01 | MTR_3g464650 | 27.074 | 229 | 121 | 8 | 80 | 302 | 127 | 315 | 3.87e-16 | 78.2 |
MsG0280007112.01.T01 | MTR_3g464700 | 30.811 | 185 | 93 | 7 | 80 | 264 | 151 | 300 | 1.51e-15 | 76.6 |
MsG0280007112.01.T01 | MTR_5g071550 | 27.511 | 229 | 120 | 9 | 80 | 302 | 187 | 375 | 4.66e-15 | 75.5 |
MsG0280007112.01.T01 | MTR_4g007440 | 30.093 | 216 | 118 | 8 | 109 | 319 | 160 | 347 | 2.22e-12 | 67.4 |
MsG0280007112.01.T01 | MTR_4g094542 | 30.942 | 223 | 112 | 12 | 81 | 301 | 182 | 364 | 2.33e-12 | 67.4 |
MsG0280007112.01.T01 | MTR_3g091060 | 26.697 | 221 | 123 | 8 | 82 | 301 | 158 | 340 | 7.01e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007112.01.T01 | AT3G06270 | 64.183 | 349 | 80 | 3 | 1 | 306 | 1 | 347 | 2.73e-149 | 423 |
MsG0280007112.01.T01 | AT2G20050 | 57.426 | 303 | 89 | 1 | 41 | 303 | 97 | 399 | 2.69e-108 | 340 |
MsG0280007112.01.T01 | AT2G20050 | 57.426 | 303 | 89 | 1 | 41 | 303 | 97 | 399 | 3.43e-108 | 339 |
MsG0280007112.01.T01 | AT4G03415 | 32.287 | 223 | 129 | 6 | 85 | 303 | 170 | 374 | 1.74e-23 | 100 |
MsG0280007112.01.T01 | AT4G03415 | 32.287 | 223 | 129 | 6 | 85 | 303 | 170 | 374 | 1.74e-23 | 100 |
MsG0280007112.01.T01 | AT4G03415 | 32.287 | 223 | 129 | 6 | 85 | 303 | 170 | 374 | 1.74e-23 | 100 |
MsG0280007112.01.T01 | AT5G27930 | 29.902 | 204 | 122 | 4 | 99 | 299 | 167 | 352 | 2.93e-23 | 99.0 |
MsG0280007112.01.T01 | AT5G27930 | 29.902 | 204 | 122 | 4 | 99 | 299 | 167 | 352 | 2.93e-23 | 99.0 |
MsG0280007112.01.T01 | AT3G05640 | 30.973 | 226 | 120 | 6 | 65 | 284 | 135 | 330 | 1.72e-22 | 96.7 |
MsG0280007112.01.T01 | AT3G05640 | 30.973 | 226 | 120 | 6 | 65 | 284 | 135 | 330 | 1.72e-22 | 96.7 |
MsG0280007112.01.T01 | AT3G05640 | 30.973 | 226 | 120 | 6 | 65 | 284 | 135 | 330 | 1.72e-22 | 96.7 |
MsG0280007112.01.T01 | AT4G32950 | 31.905 | 210 | 119 | 6 | 98 | 302 | 127 | 317 | 2.05e-22 | 95.9 |
MsG0280007112.01.T01 | AT5G26010 | 34.615 | 182 | 100 | 3 | 85 | 265 | 122 | 285 | 3.99e-22 | 95.1 |
MsG0280007112.01.T01 | AT5G01700 | 28.079 | 203 | 126 | 3 | 101 | 301 | 104 | 288 | 1.40e-21 | 94.0 |
MsG0280007112.01.T01 | AT5G01700 | 27.039 | 233 | 145 | 5 | 77 | 302 | 124 | 338 | 2.79e-21 | 93.6 |
MsG0280007112.01.T01 | AT1G79630 | 29.911 | 224 | 134 | 6 | 97 | 315 | 99 | 304 | 3.74e-21 | 93.2 |
MsG0280007112.01.T01 | AT1G79630 | 29.911 | 224 | 134 | 6 | 97 | 315 | 99 | 304 | 3.74e-21 | 93.2 |
MsG0280007112.01.T01 | AT1G79630 | 29.911 | 224 | 134 | 6 | 97 | 315 | 99 | 304 | 3.74e-21 | 93.2 |
MsG0280007112.01.T01 | AT1G79630 | 29.911 | 224 | 134 | 6 | 97 | 315 | 99 | 304 | 3.74e-21 | 93.2 |
MsG0280007112.01.T01 | AT1G03590 | 29.787 | 235 | 143 | 6 | 85 | 315 | 160 | 376 | 4.02e-21 | 94.0 |
MsG0280007112.01.T01 | AT1G79630 | 30.516 | 213 | 126 | 5 | 97 | 305 | 139 | 333 | 4.91e-21 | 93.6 |
MsG0280007112.01.T01 | AT1G79630 | 30.516 | 213 | 126 | 5 | 97 | 305 | 139 | 333 | 4.91e-21 | 93.6 |
MsG0280007112.01.T01 | AT1G79630 | 30.233 | 215 | 128 | 5 | 95 | 305 | 207 | 403 | 5.65e-21 | 93.6 |
MsG0280007112.01.T01 | AT1G79630 | 30.233 | 215 | 128 | 5 | 95 | 305 | 203 | 399 | 6.74e-21 | 93.6 |
MsG0280007112.01.T01 | AT3G02750 | 30.544 | 239 | 144 | 5 | 85 | 319 | 191 | 411 | 2.28e-20 | 91.7 |
MsG0280007112.01.T01 | AT3G02750 | 30.544 | 239 | 144 | 5 | 85 | 319 | 191 | 411 | 2.28e-20 | 91.7 |
MsG0280007112.01.T01 | AT5G36250 | 32.353 | 204 | 112 | 7 | 84 | 284 | 185 | 365 | 5.57e-20 | 90.5 |
MsG0280007112.01.T01 | AT1G16220 | 30.348 | 201 | 119 | 5 | 108 | 305 | 198 | 380 | 1.29e-19 | 89.7 |
MsG0280007112.01.T01 | AT5G27930 | 35.948 | 153 | 79 | 3 | 99 | 250 | 167 | 301 | 2.39e-19 | 87.4 |
MsG0280007112.01.T01 | AT5G10740 | 30.769 | 221 | 114 | 8 | 82 | 301 | 97 | 279 | 7.68e-19 | 86.3 |
MsG0280007112.01.T01 | AT5G10740 | 30.769 | 221 | 114 | 8 | 82 | 301 | 97 | 279 | 7.68e-19 | 86.3 |
MsG0280007112.01.T01 | AT3G16800 | 28.641 | 206 | 121 | 4 | 103 | 302 | 69 | 254 | 1.22e-18 | 84.3 |
MsG0280007112.01.T01 | AT3G16800 | 28.641 | 206 | 121 | 4 | 103 | 302 | 69 | 254 | 1.22e-18 | 84.3 |
MsG0280007112.01.T01 | AT3G16800 | 29.064 | 203 | 118 | 4 | 103 | 299 | 164 | 346 | 2.03e-18 | 85.1 |
MsG0280007112.01.T01 | AT3G16800 | 29.064 | 203 | 118 | 4 | 103 | 299 | 164 | 346 | 2.03e-18 | 85.1 |
MsG0280007112.01.T01 | AT3G16800 | 29.064 | 203 | 118 | 4 | 103 | 299 | 164 | 346 | 2.03e-18 | 85.1 |
MsG0280007112.01.T01 | AT4G32950 | 37.179 | 156 | 76 | 5 | 98 | 250 | 127 | 263 | 5.79e-18 | 82.8 |
MsG0280007112.01.T01 | AT5G24940 | 29.864 | 221 | 116 | 8 | 82 | 301 | 97 | 279 | 1.13e-17 | 83.6 |
MsG0280007112.01.T01 | AT4G31750 | 28.692 | 237 | 129 | 9 | 67 | 301 | 81 | 279 | 3.59e-17 | 80.9 |
MsG0280007112.01.T01 | AT4G31750 | 28.692 | 237 | 129 | 9 | 67 | 301 | 81 | 279 | 3.59e-17 | 80.9 |
MsG0280007112.01.T01 | AT4G31750 | 28.692 | 237 | 129 | 9 | 67 | 301 | 81 | 279 | 3.67e-17 | 80.9 |
MsG0280007112.01.T01 | AT1G07160 | 28.125 | 224 | 115 | 7 | 85 | 301 | 192 | 376 | 3.95e-17 | 81.6 |
MsG0280007112.01.T01 | AT5G36250 | 33.511 | 188 | 98 | 8 | 84 | 267 | 185 | 349 | 6.15e-17 | 80.9 |
MsG0280007112.01.T01 | AT5G36250 | 30.734 | 218 | 111 | 8 | 84 | 284 | 185 | 379 | 6.15e-17 | 81.6 |
MsG0280007112.01.T01 | AT2G30020 | 29.224 | 219 | 120 | 7 | 85 | 302 | 209 | 393 | 4.41e-15 | 75.9 |
MsG0280007112.01.T01 | AT3G02750 | 28.958 | 259 | 157 | 7 | 85 | 319 | 191 | 446 | 4.56e-15 | 76.3 |
MsG0280007112.01.T01 | AT5G53140 | 26.549 | 226 | 127 | 8 | 78 | 302 | 161 | 348 | 1.58e-14 | 74.3 |
MsG0280007112.01.T01 | AT5G53140 | 26.549 | 226 | 127 | 8 | 78 | 302 | 161 | 348 | 1.58e-14 | 74.3 |
MsG0280007112.01.T01 | AT2G40180 | 27.354 | 223 | 116 | 9 | 86 | 302 | 204 | 386 | 7.59e-14 | 72.0 |
MsG0280007112.01.T01 | AT1G67820 | 28.934 | 197 | 101 | 7 | 80 | 272 | 149 | 310 | 9.78e-14 | 71.6 |
MsG0280007112.01.T01 | AT1G78200 | 27.803 | 223 | 123 | 8 | 82 | 302 | 97 | 283 | 1.16e-13 | 70.5 |
MsG0280007112.01.T01 | AT1G78200 | 27.803 | 223 | 123 | 8 | 82 | 302 | 97 | 283 | 1.16e-13 | 70.5 |
MsG0280007112.01.T01 | AT1G78200 | 27.803 | 223 | 123 | 8 | 82 | 302 | 97 | 283 | 1.16e-13 | 70.5 |
MsG0280007112.01.T01 | AT1G78200 | 27.803 | 223 | 123 | 8 | 82 | 302 | 52 | 238 | 1.25e-13 | 69.7 |
MsG0280007112.01.T01 | AT1G78200 | 27.803 | 223 | 123 | 8 | 82 | 302 | 52 | 238 | 1.25e-13 | 69.7 |
MsG0280007112.01.T01 | AT1G67820 | 28.934 | 197 | 101 | 7 | 80 | 272 | 185 | 346 | 1.46e-13 | 71.2 |
MsG0280007112.01.T01 | AT1G43900 | 31.081 | 222 | 113 | 9 | 82 | 302 | 187 | 369 | 1.24e-12 | 68.2 |
MsG0280007112.01.T01 | AT2G20630 | 28.829 | 222 | 119 | 10 | 82 | 302 | 96 | 279 | 4.96e-12 | 65.9 |
MsG0280007112.01.T01 | AT2G20630 | 28.440 | 218 | 117 | 9 | 82 | 298 | 96 | 275 | 2.69e-11 | 63.5 |
MsG0280007112.01.T01 | AT2G25070 | 29.208 | 202 | 112 | 6 | 108 | 305 | 159 | 333 | 5.70e-11 | 63.2 |
MsG0280007112.01.T01 | AT2G25070 | 29.208 | 202 | 112 | 6 | 108 | 305 | 159 | 333 | 5.70e-11 | 63.2 |
Find 87 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGATTACGGTGTTGGTTAT+AGG | 0.202635 | 2:-10810416 | MsG0280007112.01.T01:CDS |
CGATTACGGTGTTGGTTATA+GGG | 0.213735 | 2:-10810415 | MsG0280007112.01.T01:CDS |
TCAAATATGGGTTGTGTTCA+TGG | 0.271492 | 2:-10810874 | None:intergenic |
TGTGTGAGTATGTGCTTCTT+AGG | 0.299664 | 2:+10810787 | None:intergenic |
TCATATTCATCTCTCCTAAA+TGG | 0.301253 | 2:+10810293 | None:intergenic |
CCTCTGATCAGACACCATTT+AGG | 0.314388 | 2:-10810307 | MsG0280007112.01.T01:CDS |
ACCAAGATTGTTATTGTGTT+AGG | 0.333236 | 2:-10810663 | MsG0280007112.01.T01:CDS |
TCACCCCAAGTCTGAATATC+AGG | 0.338735 | 2:+10810209 | None:intergenic |
GATGCATGTGCTGCCATTGC+TGG | 0.362529 | 2:-10808693 | MsG0280007112.01.T01:CDS |
CTGGAGAGTCTTACAAACTA+TGG | 0.364755 | 2:-10808674 | MsG0280007112.01.T01:CDS |
TCCTAACACAATAACAATCT+TGG | 0.372739 | 2:+10810662 | None:intergenic |
GCTGAATTATAAGCCTTAAC+AGG | 0.373479 | 2:+10810503 | None:intergenic |
AAGGAGTGTAGGGGATAGTT+TGG | 0.383776 | 2:-10810114 | MsG0280007112.01.T01:CDS |
AAGCCAAACTGTTGTTGATA+TGG | 0.388203 | 2:-10809985 | MsG0280007112.01.T01:intron |
TGCTTCACACAATTTCACTA+TGG | 0.393839 | 2:-10810740 | MsG0280007112.01.T01:CDS |
TCCCTAGAGCCACCAATTGA+TGG | 0.398728 | 2:+10810826 | None:intergenic |
GAGGGCGGTGTTGGCTGTTA+AGG | 0.406475 | 2:-10810360 | MsG0280007112.01.T01:CDS |
TTGGGGTGATGAAGAGAGTC+AGG | 0.411344 | 2:-10810195 | MsG0280007112.01.T01:CDS |
CAACAACAGTTTGGCTTGAC+AGG | 0.412932 | 2:+10809991 | None:intergenic |
GAGTGGTACTACCGCGATTA+CGG | 0.413802 | 2:-10810429 | MsG0280007112.01.T01:CDS |
GATAGTTTGGCTGAGACTAT+TGG | 0.418790 | 2:-10810101 | MsG0280007112.01.T01:CDS |
GTTCAGAATGGGATGATTCC+TGG | 0.421871 | 2:-10810149 | MsG0280007112.01.T01:CDS |
GTGTGAGTATGTGCTTCTTA+GGG | 0.422718 | 2:+10810788 | None:intergenic |
TGCGGTTCCAGAGGTGTTAA+CGG | 0.424209 | 2:-10810072 | MsG0280007112.01.T01:CDS |
CTATCCTGATTCACCCGATA+AGG | 0.432231 | 2:-10810689 | MsG0280007112.01.T01:CDS |
CCATTCTGAACCCACAATCT+AGG | 0.435294 | 2:+10810161 | None:intergenic |
ATACCATATCAACAACAGTT+TGG | 0.440907 | 2:+10809982 | None:intergenic |
CGTTATCCTGCACCATCAAT+TGG | 0.450895 | 2:-10810838 | MsG0280007112.01.T01:CDS |
AGCTGAACCGTTAACACCTC+TGG | 0.458512 | 2:+10810065 | None:intergenic |
TTCTTTGTCGTTGCAAGTGA+TGG | 0.461813 | 2:-10810026 | MsG0280007112.01.T01:CDS |
TGATCAGGTGGAAGGGCATA+AGG | 0.467631 | 2:-10810234 | MsG0280007112.01.T01:CDS |
AGTATGTGCTTCTTAGGGAC+AGG | 0.475916 | 2:+10810793 | None:intergenic |
CTAGATTGTGGGTTCAGAAT+GGG | 0.476123 | 2:-10810160 | MsG0280007112.01.T01:CDS |
AATGGCAGCACATGCATCAC+GGG | 0.483050 | 2:+10808698 | None:intergenic |
GTGATGATCCTCCTAGATTG+TGG | 0.486182 | 2:-10810172 | MsG0280007112.01.T01:CDS |
TAGGGTGTTGAGTGTTGATC+AGG | 0.490225 | 2:-10810249 | MsG0280007112.01.T01:CDS |
CCTAGATTGTGGGTTCAGAA+TGG | 0.493333 | 2:-10810161 | MsG0280007112.01.T01:CDS |
ATTATCATTGTTCAGATCAA+AGG | 0.494077 | 2:-10808618 | MsG0280007112.01.T01:CDS |
GGTACATCTGAGTACGGATC+AGG | 0.496415 | 2:-10808406 | MsG0280007112.01.T01:CDS |
ATTGTTAGAGGATCCTGTTA+AGG | 0.497099 | 2:-10810516 | MsG0280007112.01.T01:intron |
CACCATCAATTGGTGGCTCT+AGG | 0.503277 | 2:-10810828 | MsG0280007112.01.T01:CDS |
CGGTGTTGGCTGTTAAGGAC+GGG | 0.504994 | 2:-10810355 | MsG0280007112.01.T01:CDS |
GGATCCTGATATTCAGACTT+GGG | 0.506805 | 2:-10810213 | MsG0280007112.01.T01:CDS |
CGGGAATAGAATTGTAGCTC+AGG | 0.508303 | 2:-10810336 | MsG0280007112.01.T01:CDS |
TACTACCGCGATTACGGTGT+TGG | 0.510125 | 2:-10810423 | MsG0280007112.01.T01:CDS |
ACCATCAATTGGTGGCTCTA+GGG | 0.510461 | 2:-10810827 | MsG0280007112.01.T01:CDS |
TGATGATCCTCCTAGATTGT+GGG | 0.511280 | 2:-10810171 | MsG0280007112.01.T01:CDS |
TGGTGATTCGAGGGCGGTGT+TGG | 0.514167 | 2:-10810369 | MsG0280007112.01.T01:CDS |
TTGCGAATGTTGGTGATTCG+AGG | 0.518226 | 2:-10810379 | MsG0280007112.01.T01:CDS |
GAGCCACCAATTGATGGTGC+AGG | 0.519755 | 2:+10810832 | None:intergenic |
AGTGAAGCTTAGTGGTGCTA+GGG | 0.524175 | 2:-10810267 | MsG0280007112.01.T01:CDS |
ACGCTTTATGTTGCGAATGT+TGG | 0.525449 | 2:-10810389 | MsG0280007112.01.T01:CDS |
TATGAGAGAGTGAAGCTTAG+TGG | 0.530192 | 2:-10810275 | MsG0280007112.01.T01:CDS |
ACGACAAAGAAAAGATGATC+CGG | 0.531459 | 2:+10810038 | None:intergenic |
CTCCTTGTAAAAGCAGCTCC+AGG | 0.532586 | 2:+10810131 | None:intergenic |
GAGTGAAGCTTAGTGGTGCT+AGG | 0.533858 | 2:-10810268 | MsG0280007112.01.T01:CDS |
GCGGTGTTGGCTGTTAAGGA+CGG | 0.537963 | 2:-10810356 | MsG0280007112.01.T01:CDS |
CAATGGCAGCACATGCATCA+CGG | 0.539402 | 2:+10808697 | None:intergenic |
TTTAAGTTCATACATGAGAC+GGG | 0.542090 | 2:+10808595 | None:intergenic |
CAAACTATGGTTGGAACATG+AGG | 0.543259 | 2:-10808661 | MsG0280007112.01.T01:CDS |
ATTTAAGTTCATACATGAGA+CGG | 0.543877 | 2:+10808594 | None:intergenic |
GGATCAGGAGAGATCAATGT+TGG | 0.549388 | 2:-10808391 | MsG0280007112.01.T01:CDS |
AGGATCCTGATATTCAGACT+TGG | 0.558046 | 2:-10810214 | MsG0280007112.01.T01:CDS |
AGAGTCTTACAAACTATGGT+TGG | 0.559644 | 2:-10808670 | MsG0280007112.01.T01:CDS |
TATCCTGCACCATCAATTGG+TGG | 0.575659 | 2:-10810835 | MsG0280007112.01.T01:CDS |
TGGTGTTATTGCGGTTCCAG+AGG | 0.582043 | 2:-10810081 | MsG0280007112.01.T01:CDS |
TAGTCAGGTACATCTGAGTA+CGG | 0.587919 | 2:-10808412 | MsG0280007112.01.T01:intron |
GTTAACGGTTCAGCTTAAGC+CGG | 0.593244 | 2:-10810057 | MsG0280007112.01.T01:CDS |
TTGAGTGTTGATCAGGTGGA+AGG | 0.593641 | 2:-10810242 | MsG0280007112.01.T01:CDS |
GAGATTGATGATTGTATGAG+TGG | 0.605602 | 2:-10810446 | MsG0280007112.01.T01:CDS |
TGTGTTAGGACGCAATTGCA+AGG | 0.606214 | 2:-10810649 | MsG0280007112.01.T01:intron |
CCTAAATGGTGTCTGATCAG+AGG | 0.607645 | 2:+10810307 | None:intergenic |
TGCGAATGTTGGTGATTCGA+GGG | 0.614063 | 2:-10810378 | MsG0280007112.01.T01:CDS |
TGAGACTATTGGTGTTATTG+CGG | 0.618341 | 2:-10810090 | MsG0280007112.01.T01:CDS |
GATTACGGTGTTGGTTATAG+GGG | 0.627105 | 2:-10810414 | MsG0280007112.01.T01:CDS |
TTTGTAAGACTCTCCAGCAA+TGG | 0.632607 | 2:+10808680 | None:intergenic |
TATAACCAACACCGTAATCG+CGG | 0.633218 | 2:+10810418 | None:intergenic |
GGTGTTGAGTGTTGATCAGG+TGG | 0.646452 | 2:-10810246 | MsG0280007112.01.T01:CDS |
TTCTGAACCCACAATCTAGG+AGG | 0.648400 | 2:+10810164 | None:intergenic |
AAACTATGGTTGGAACATGA+GGG | 0.651163 | 2:-10808660 | MsG0280007112.01.T01:CDS |
TGAGTGTTGATCAGGTGGAA+GGG | 0.658387 | 2:-10810241 | MsG0280007112.01.T01:CDS |
GATCCTGATATTCAGACTTG+GGG | 0.666905 | 2:-10810212 | MsG0280007112.01.T01:CDS |
TGGGGTGATGAAGAGAGTCA+GGG | 0.677138 | 2:-10810194 | MsG0280007112.01.T01:CDS |
TACTCTGTACTTACTCAGAG+AGG | 0.692582 | 2:-10810715 | MsG0280007112.01.T01:CDS |
ATGGCAGCACATGCATCACG+GGG | 0.706045 | 2:+10808699 | None:intergenic |
AGAAGCACATACTCACACAA+AGG | 0.715753 | 2:-10810783 | MsG0280007112.01.T01:CDS |
GAATGTTGGTGATTCGAGGG+CGG | 0.720824 | 2:-10810375 | MsG0280007112.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAATCACTTAT+AGG | + | Chr2:10809812-10809831 | None:intergenic | 10.0% |
!! | ATCATAACATATATATATAT+AGG | + | Chr2:10810469-10810488 | None:intergenic | 10.0% |
!! | ATTAGTATTAACTATTAATT+AGG | - | Chr2:10810065-10810084 | MsG0280007112.01.T01:CDS | 10.0% |
!! | AATTAGTAAATACCTTAAAA+AGG | + | Chr2:10809349-10809368 | None:intergenic | 15.0% |
!! | ATAAATAAAACATTACCTAA+AGG | + | Chr2:10809995-10810014 | None:intergenic | 15.0% |
!! | ATATATTATCTTTCCTAAAA+TGG | - | Chr2:10809872-10809891 | MsG0280007112.01.T01:intron | 15.0% |
!! | TAAATAAAACATTACCTAAA+GGG | + | Chr2:10809994-10810013 | None:intergenic | 15.0% |
!!! | AGTGATTTTTTTTTTTTGTA+TGG | - | Chr2:10809815-10809834 | MsG0280007112.01.T01:intron | 15.0% |
!!! | ATTTAAAATGTTGTCAAATA+AGG | - | Chr2:10809531-10809550 | MsG0280007112.01.T01:intron | 15.0% |
!!! | ATTTTAGGAAAGATAATATA+TGG | + | Chr2:10809873-10809892 | None:intergenic | 15.0% |
!!! | GTTTTATTTATGTTAAACTA+TGG | - | Chr2:10810004-10810023 | MsG0280007112.01.T01:CDS | 15.0% |
!!! | TAATTTTGTTAAGAATAAGT+TGG | - | Chr2:10808688-10808707 | MsG0280007112.01.T01:CDS | 15.0% |
!!! | TATGAACTTAAATATTCTTT+TGG | - | Chr2:10810667-10810686 | MsG0280007112.01.T01:CDS | 15.0% |
!!! | TTTAAAATGTTGTCAAATAA+GGG | - | Chr2:10809532-10809551 | MsG0280007112.01.T01:intron | 15.0% |
!!! | TTTTAGGAAAGATAATATAT+GGG | + | Chr2:10809872-10809891 | None:intergenic | 15.0% |
!! | AATAAATGTATCTTGCAATT+TGG | - | Chr2:10810108-10810127 | MsG0280007112.01.T01:CDS | 20.0% |
!! | AGATAAACAAGTAAAATGAT+GGG | + | Chr2:10810802-10810821 | None:intergenic | 20.0% |
!! | CAGAAAATTTCAAATGTAAA+AGG | + | Chr2:10809785-10809804 | None:intergenic | 20.0% |
!! | CTATATAAATAACATGCTAA+AGG | + | Chr2:10810693-10810712 | None:intergenic | 20.0% |
!! | TAGATAAACAAGTAAAATGA+TGG | + | Chr2:10810803-10810822 | None:intergenic | 20.0% |
!! | TATTCAATACACTTTCTTTA+TGG | - | Chr2:10810724-10810743 | MsG0280007112.01.T01:CDS | 20.0% |
!! | TTACTTGTTTATCTAATCAT+TGG | - | Chr2:10810808-10810827 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | AGAAAAACATTAGTTTTCTT+CGG | - | Chr2:10810335-10810354 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | ATTAATTAGGAGTATATGTT+TGG | - | Chr2:10810078-10810097 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | CTTTAGCATGTTATTTATAT+AGG | - | Chr2:10810691-10810710 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | GATAAGTTATGATTTCTTTT+TGG | - | Chr2:10810504-10810523 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | TTAATTAGGAGTATATGTTT+GGG | - | Chr2:10810079-10810098 | MsG0280007112.01.T01:CDS | 20.0% |
!!! | TTACTACATTTTCTTTTTTG+TGG | - | Chr2:10809636-10809655 | MsG0280007112.01.T01:intron | 20.0% |
!!! | TTCTTTCTATTTCCTTTTTA+AGG | - | Chr2:10809334-10809353 | MsG0280007112.01.T01:intron | 20.0% |
! | AACAATGCATAATATATGCA+AGG | + | Chr2:10809684-10809703 | None:intergenic | 25.0% |
! | AATAACAAATGAGTAGTGAA+AGG | + | Chr2:10810405-10810424 | None:intergenic | 25.0% |
! | ACTAAAAAAACAACTTACAC+AGG | + | Chr2:10810314-10810333 | None:intergenic | 25.0% |
! | ATACTTACTGTAATTCTTGT+AGG | - | Chr2:10809401-10809420 | MsG0280007112.01.T01:intron | 25.0% |
! | ATTATCATTGTTCAGATCAA+AGG | - | Chr2:10810633-10810652 | MsG0280007112.01.T01:intron | 25.0% |
! | GAAAGATGTAATGAAGAAAA+AGG | + | Chr2:10809317-10809336 | None:intergenic | 25.0% |
! | GTGCTTATAATAAGTAACAA+AGG | + | Chr2:10809911-10809930 | None:intergenic | 25.0% |
! | TATTATCTTTCCTAAAATGG+CGG | - | Chr2:10809875-10809894 | MsG0280007112.01.T01:intron | 25.0% |
!! | ATTGTTACTTAAATCACCAA+TGG | + | Chr2:10810763-10810782 | None:intergenic | 25.0% |
!! | ATTTAAGTTCATACATGAGA+CGG | + | Chr2:10810660-10810679 | None:intergenic | 25.0% |
!! | GAATTGTATGTTATTTGTCA+CGG | - | Chr2:10809754-10809773 | MsG0280007112.01.T01:intron | 25.0% |
!! | TAATTAGGAGTATATGTTTG+GGG | - | Chr2:10810080-10810099 | MsG0280007112.01.T01:CDS | 25.0% |
!!! | ATTTGTTATTTTTAGCACTG+TGG | - | Chr2:10810415-10810434 | MsG0280007112.01.T01:CDS | 25.0% |
!!! | GACATTCTTTTTTTACGAAA+AGG | - | Chr2:10810150-10810169 | MsG0280007112.01.T01:CDS | 25.0% |
AAGTAGGAACATTGGTAAAA+TGG | + | Chr2:10809962-10809981 | None:intergenic | 30.0% | |
AATCCTAGTGTTCATTTCTT+TGG | - | Chr2:10808626-10808645 | MsG0280007112.01.T01:CDS | 30.0% | |
ACACACTTAATAGATGTGAA+AGG | + | Chr2:10809939-10809958 | None:intergenic | 30.0% | |
ACGAAAAGGTCATATACTAA+GGG | - | Chr2:10810164-10810183 | MsG0280007112.01.T01:CDS | 30.0% | |
ATACCATATCAACAACAGTT+TGG | + | Chr2:10809272-10809291 | None:intergenic | 30.0% | |
CATAATATATGCAAGGTTCA+GGG | + | Chr2:10809677-10809696 | None:intergenic | 30.0% | |
GATAATATATGGGAAGAATG+TGG | + | Chr2:10809862-10809881 | None:intergenic | 30.0% | |
TAATGATTCTGCATTGTTAG+AGG | - | Chr2:10808723-10808742 | MsG0280007112.01.T01:intron | 30.0% | |
TACGAAAAGGTCATATACTA+AGG | - | Chr2:10810163-10810182 | MsG0280007112.01.T01:CDS | 30.0% | |
TATGCTGATATTGTCTTCAT+TGG | - | Chr2:10809368-10809387 | MsG0280007112.01.T01:intron | 30.0% | |
TCATATTCATCTCTCCTAAA+TGG | + | Chr2:10808961-10808980 | None:intergenic | 30.0% | |
TCCTAACACAATAACAATCT+TGG | + | Chr2:10808592-10808611 | None:intergenic | 30.0% | |
TGGAAAAGGATTTATAGCTA+GGG | - | Chr2:10810128-10810147 | MsG0280007112.01.T01:CDS | 30.0% | |
TGTATCTTGCAATTTGGAAA+AGG | - | Chr2:10810114-10810133 | MsG0280007112.01.T01:CDS | 30.0% | |
TTGGAAAAGGATTTATAGCT+AGG | - | Chr2:10810127-10810146 | MsG0280007112.01.T01:CDS | 30.0% | |
! | AACAAGTAAAATGATGGGAA+TGG | + | Chr2:10810797-10810816 | None:intergenic | 30.0% |
! | AAGGCATTTATTACATTTGG+TGG | - | Chr2:10809732-10809751 | MsG0280007112.01.T01:intron | 30.0% |
! | ACCAAGATTGTTATTGTGTT+AGG | - | Chr2:10808588-10808607 | MsG0280007112.01.T01:intron | 30.0% |
! | GTGCTACTAAATATGATGTT+TGG | - | Chr2:10810437-10810456 | MsG0280007112.01.T01:CDS | 30.0% |
! | TTTAAGTTCATACATGAGAC+GGG | + | Chr2:10810659-10810678 | None:intergenic | 30.0% |
!! | ACAATCTTGGTTTTCCTTAT+CGG | + | Chr2:10808579-10808598 | None:intergenic | 30.0% |
!! | CATTTCTTTGGTGTTTATGA+TGG | - | Chr2:10808638-10808657 | MsG0280007112.01.T01:CDS | 30.0% |
!! | CTACATTTTCTTTTTTGTGG+TGG | - | Chr2:10809639-10809658 | MsG0280007112.01.T01:intron | 30.0% |
!! | GGAAAGGCATTTATTACATT+TGG | - | Chr2:10809729-10809748 | MsG0280007112.01.T01:intron | 30.0% |
!!! | ATGATTTCTTTTTGGAGTGT+AGG | - | Chr2:10810512-10810531 | MsG0280007112.01.T01:intron | 30.0% |
!!! | GGCTTATAATTCAGCTTTTT+TGG | - | Chr2:10808756-10808775 | MsG0280007112.01.T01:intron | 30.0% |
AAACTATGGTTGGAACATGA+GGG | - | Chr2:10810591-10810610 | MsG0280007112.01.T01:intron | 35.0% | |
AACTTAGGAAGTAGGAACAT+TGG | + | Chr2:10809970-10809989 | None:intergenic | 35.0% | |
AAGCCAAACTGTTGTTGATA+TGG | - | Chr2:10809266-10809285 | MsG0280007112.01.T01:intron | 35.0% | |
ACACCAAAGAAATGAACACT+AGG | + | Chr2:10808632-10808651 | None:intergenic | 35.0% | |
ACGACAAAGAAAAGATGATC+CGG | + | Chr2:10809216-10809235 | None:intergenic | 35.0% | |
AGAGTCTTACAAACTATGGT+TGG | - | Chr2:10810581-10810600 | MsG0280007112.01.T01:intron | 35.0% | |
ATTGTTAGAGGATCCTGTTA+AGG | - | Chr2:10808735-10808754 | MsG0280007112.01.T01:intron | 35.0% | |
CATTACCTAAAGGGTAACTT+AGG | + | Chr2:10809985-10810004 | None:intergenic | 35.0% | |
GATTAGCACCTAGTGATATT+TGG | + | Chr2:10810263-10810282 | None:intergenic | 35.0% | |
GCATAATATATGCAAGGTTC+AGG | + | Chr2:10809678-10809697 | None:intergenic | 35.0% | |
GCTGAATTATAAGCCTTAAC+AGG | + | Chr2:10808751-10808770 | None:intergenic | 35.0% | |
TAAAGGGTAACTTAGGAAGT+AGG | + | Chr2:10809978-10809997 | None:intergenic | 35.0% | |
TACTTCCTAAGTTACCCTTT+AGG | - | Chr2:10809977-10809996 | MsG0280007112.01.T01:intron | 35.0% | |
TCACAAGACCAAATATCACT+AGG | - | Chr2:10810252-10810271 | MsG0280007112.01.T01:CDS | 35.0% | |
TGCTTCACACAATTTCACTA+TGG | - | Chr2:10808511-10808530 | MsG0280007112.01.T01:intron | 35.0% | |
! | CACAGGTTGTGAAAACATTT+TGG | + | Chr2:10810297-10810316 | None:intergenic | 35.0% |
! | GAGATTGATGATTGTATGAG+TGG | - | Chr2:10808805-10808824 | MsG0280007112.01.T01:intron | 35.0% |
!! | ATTTTCTTTTTTGTGGTGGC+CGG | - | Chr2:10809643-10809662 | MsG0280007112.01.T01:intron | 35.0% |
!! | CAAGAATAAACCGCCATTTT+AGG | + | Chr2:10809888-10809907 | None:intergenic | 35.0% |
!! | CAATCTTGGTTTTCCTTATC+GGG | + | Chr2:10808578-10808597 | None:intergenic | 35.0% |
!! | TATGATGGACATGGTGAATT+TGG | - | Chr2:10808653-10808672 | MsG0280007112.01.T01:CDS | 35.0% |
!! | TGAGACTATTGGTGTTATTG+CGG | - | Chr2:10809161-10809180 | MsG0280007112.01.T01:intron | 35.0% |
!! | TTTGGTGTTTATGATGGACA+TGG | - | Chr2:10808644-10808663 | MsG0280007112.01.T01:CDS | 35.0% |
!!! | TCATTGGTTTTTCTGTAGTC+AGG | - | Chr2:10810824-10810843 | MsG0280007112.01.T01:CDS | 35.0% |
AAGAAAAAGGCTGCATTTGC+AGG | + | Chr2:10809304-10809323 | None:intergenic | 40.0% | |
ACGCTTTATGTTGCGAATGT+TGG | - | Chr2:10808862-10808881 | MsG0280007112.01.T01:intron | 40.0% | |
AGGATCCTGATATTCAGACT+TGG | - | Chr2:10809037-10809056 | MsG0280007112.01.T01:intron | 40.0% | |
CAAACTATGGTTGGAACATG+AGG | - | Chr2:10810590-10810609 | MsG0280007112.01.T01:intron | 40.0% | |
CTAGATTGTGGGTTCAGAAT+GGG | - | Chr2:10809091-10809110 | MsG0280007112.01.T01:intron | 40.0% | |
CTGGAGAGTCTTACAAACTA+TGG | - | Chr2:10810577-10810596 | MsG0280007112.01.T01:intron | 40.0% | |
GATAGTTTGGCTGAGACTAT+TGG | - | Chr2:10809150-10809169 | MsG0280007112.01.T01:intron | 40.0% | |
GATCCTGATATTCAGACTTG+GGG | - | Chr2:10809039-10809058 | MsG0280007112.01.T01:intron | 40.0% | |
GGATCCTGATATTCAGACTT+GGG | - | Chr2:10809038-10809057 | MsG0280007112.01.T01:intron | 40.0% | |
GTGTGAGTATGTGCTTCTTA+GGG | + | Chr2:10808466-10808485 | None:intergenic | 40.0% | |
TACTCTGTACTTACTCAGAG+AGG | - | Chr2:10808536-10808555 | MsG0280007112.01.T01:intron | 40.0% | |
TAGTCAGGTACATCTGAGTA+CGG | - | Chr2:10810839-10810858 | MsG0280007112.01.T01:CDS | 40.0% | |
TATAACCAACACCGTAATCG+CGG | + | Chr2:10808836-10808855 | None:intergenic | 40.0% | |
TATATGCAAGGTTCAGGGTT+CGG | + | Chr2:10809672-10809691 | None:intergenic | 40.0% | |
TATGAGAGAGTGAAGCTTAG+TGG | - | Chr2:10808976-10808995 | MsG0280007112.01.T01:intron | 40.0% | |
TGATGATCCTCCTAGATTGT+GGG | - | Chr2:10809080-10809099 | MsG0280007112.01.T01:intron | 40.0% | |
TGGAGAACTGAAAACTCCAT+TGG | - | Chr2:10810744-10810763 | MsG0280007112.01.T01:CDS | 40.0% | |
TGTGTGAGTATGTGCTTCTT+AGG | + | Chr2:10808467-10808486 | None:intergenic | 40.0% | |
TTCTTTGTCGTTGCAAGTGA+TGG | - | Chr2:10809225-10809244 | MsG0280007112.01.T01:intron | 40.0% | |
TTGTCAAATAGCAGCCATAG+CGG | - | Chr2:10809452-10809471 | MsG0280007112.01.T01:intron | 40.0% | |
TTTGTAAGACTCTCCAGCAA+TGG | + | Chr2:10810574-10810593 | None:intergenic | 40.0% | |
! | AACCGCGGATTGCATAAAAT+GGG | + | Chr2:10809603-10809622 | None:intergenic | 40.0% |
! | AGAAGCACATACTCACACAA+AGG | - | Chr2:10808468-10808487 | MsG0280007112.01.T01:intron | 40.0% |
! | TTTTCCTTATCGGGTGAATC+AGG | + | Chr2:10808569-10808588 | None:intergenic | 40.0% |
!! | CGATTACGGTGTTGGTTATA+GGG | - | Chr2:10808836-10808855 | MsG0280007112.01.T01:intron | 40.0% |
!! | CTGCTTTTACAAGGAGTGTA+GGG | - | Chr2:10809127-10809146 | MsG0280007112.01.T01:intron | 40.0% |
!! | GATTACGGTGTTGGTTATAG+GGG | - | Chr2:10808837-10808856 | MsG0280007112.01.T01:intron | 40.0% |
!! | TGCTTTTACAAGGAGTGTAG+GGG | - | Chr2:10809128-10809147 | MsG0280007112.01.T01:intron | 40.0% |
!! | TTTTCTTTTTTGTGGTGGCC+GGG | - | Chr2:10809644-10809663 | MsG0280007112.01.T01:intron | 40.0% |
AGTATGTGCTTCTTAGGGAC+AGG | + | Chr2:10808461-10808480 | None:intergenic | 45.0% | |
CCATTCTGAACCCACAATCT+AGG | + | Chr2:10809093-10809112 | None:intergenic | 45.0% | |
CCTAAATGGTGTCTGATCAG+AGG | + | Chr2:10808947-10808966 | None:intergenic | 45.0% | |
CCTAGATTGTGGGTTCAGAA+TGG | - | Chr2:10809090-10809109 | MsG0280007112.01.T01:intron | 45.0% | |
CCTCTGATCAGACACCATTT+AGG | - | Chr2:10808944-10808963 | MsG0280007112.01.T01:intron | 45.0% | |
CGGGAATAGAATTGTAGCTC+AGG | - | Chr2:10808915-10808934 | MsG0280007112.01.T01:intron | 45.0% | |
CGTGTATCGCAGAACAATAG+CGG | + | Chr2:10809511-10809530 | None:intergenic | 45.0% | |
CGTTATCCTGCACCATCAAT+TGG | - | Chr2:10808413-10808432 | MsG0280007112.01.T01:intron | 45.0% | |
CTATCCTGATTCACCCGATA+AGG | - | Chr2:10808562-10808581 | MsG0280007112.01.T01:intron | 45.0% | |
GATGGACATGGTGAATTTGG+TGG | - | Chr2:10808656-10808675 | MsG0280007112.01.T01:CDS | 45.0% | |
GGATCAGGAGAGATCAATGT+TGG | - | Chr2:10810860-10810879 | MsG0280007112.01.T01:CDS | 45.0% | |
GTGATGATCCTCCTAGATTG+TGG | - | Chr2:10809079-10809098 | MsG0280007112.01.T01:intron | 45.0% | |
GTTAACGGTTCAGCTTAAGC+CGG | - | Chr2:10809194-10809213 | MsG0280007112.01.T01:intron | 45.0% | |
GTTCAGAATGGGATGATTCC+TGG | - | Chr2:10809102-10809121 | MsG0280007112.01.T01:intron | 45.0% | |
TATCCTGCACCATCAATTGG+TGG | - | Chr2:10808416-10808435 | MsG0280007112.01.T01:intron | 45.0% | |
TCACCCCAAGTCTGAATATC+AGG | + | Chr2:10809045-10809064 | None:intergenic | 45.0% | |
TGTGTTAGGACGCAATTGCA+AGG | - | Chr2:10808602-10808621 | MsG0280007112.01.T01:intron | 45.0% | |
TTCTGAACCCACAATCTAGG+AGG | + | Chr2:10809090-10809109 | None:intergenic | 45.0% | |
! | AAGGAGTGTAGGGGATAGTT+TGG | - | Chr2:10809137-10809156 | MsG0280007112.01.T01:intron | 45.0% |
! | ACCATCAATTGGTGGCTCTA+GGG | - | Chr2:10808424-10808443 | MsG0280007112.01.T01:intron | 45.0% |
! | ACCGCGGATTGCATAAAATG+GGG | + | Chr2:10809602-10809621 | None:intergenic | 45.0% |
! | AGTGAAGCTTAGTGGTGCTA+GGG | - | Chr2:10808984-10809003 | MsG0280007112.01.T01:intron | 45.0% |
! | CAACCGCGGATTGCATAAAA+TGG | + | Chr2:10809604-10809623 | None:intergenic | 45.0% |
! | TCCCCATTTTATGCAATCCG+CGG | - | Chr2:10809598-10809617 | MsG0280007112.01.T01:intron | 45.0% |
!! | CAACAACAGTTTGGCTTGAC+AGG | + | Chr2:10809263-10809282 | None:intergenic | 45.0% |
!! | GCGATTACGGTGTTGGTTAT+AGG | - | Chr2:10808835-10808854 | MsG0280007112.01.T01:intron | 45.0% |
!! | TAGGGTGTTGAGTGTTGATC+AGG | - | Chr2:10809002-10809021 | MsG0280007112.01.T01:intron | 45.0% |
!! | TGAGTGTTGATCAGGTGGAA+GGG | - | Chr2:10809010-10809029 | MsG0280007112.01.T01:intron | 45.0% |
!! | TGCGAATGTTGGTGATTCGA+GGG | - | Chr2:10808873-10808892 | MsG0280007112.01.T01:intron | 45.0% |
!! | TTGAGTGTTGATCAGGTGGA+AGG | - | Chr2:10809009-10809028 | MsG0280007112.01.T01:intron | 45.0% |
!! | TTGCGAATGTTGGTGATTCG+AGG | - | Chr2:10808872-10808891 | MsG0280007112.01.T01:intron | 45.0% |
!!! | GCTGCTTTTACAAGGAGTGT+AGG | - | Chr2:10809126-10809145 | MsG0280007112.01.T01:intron | 45.0% |
!!! | TTCCTGGAGCTGCTTTTACA+AGG | - | Chr2:10809118-10809137 | MsG0280007112.01.T01:intron | 45.0% |
!!! | TTTCTTTTTTGTGGTGGCCG+GGG | - | Chr2:10809645-10809664 | MsG0280007112.01.T01:intron | 45.0% |
AAATGCCTAGTCGTCAACCG+CGG | + | Chr2:10809618-10809637 | None:intergenic | 50.0% | |
AATGGCAGCACATGCATCAC+GGG | + | Chr2:10810556-10810575 | None:intergenic | 50.0% | |
AGCTGAACCGTTAACACCTC+TGG | + | Chr2:10809189-10809208 | None:intergenic | 50.0% | |
CAATGGCAGCACATGCATCA+CGG | + | Chr2:10810557-10810576 | None:intergenic | 50.0% | |
CTCCTTGTAAAAGCAGCTCC+AGG | + | Chr2:10809123-10809142 | None:intergenic | 50.0% | |
GAGTGAAGCTTAGTGGTGCT+AGG | - | Chr2:10808983-10809002 | MsG0280007112.01.T01:intron | 50.0% | |
GAGTGGTACTACCGCGATTA+CGG | - | Chr2:10808822-10808841 | MsG0280007112.01.T01:intron | 50.0% | |
GGTACATCTGAGTACGGATC+AGG | - | Chr2:10810845-10810864 | MsG0280007112.01.T01:CDS | 50.0% | |
TACTACCGCGATTACGGTGT+TGG | - | Chr2:10808828-10808847 | MsG0280007112.01.T01:intron | 50.0% | |
TCCCTAGAGCCACCAATTGA+TGG | + | Chr2:10808428-10808447 | None:intergenic | 50.0% | |
TGAGCTAAGCTCACGAGGAA+AGG | - | Chr2:10809713-10809732 | MsG0280007112.01.T01:intron | 50.0% | |
TGGGGTGATGAAGAGAGTCA+GGG | - | Chr2:10809057-10809076 | MsG0280007112.01.T01:intron | 50.0% | |
TTGGGGTGATGAAGAGAGTC+AGG | - | Chr2:10809056-10809075 | MsG0280007112.01.T01:intron | 50.0% | |
! | CACCATCAATTGGTGGCTCT+AGG | - | Chr2:10808423-10808442 | MsG0280007112.01.T01:intron | 50.0% |
! | GCGGATTGCATAAAATGGGG+AGG | + | Chr2:10809599-10809618 | None:intergenic | 50.0% |
! | TGATCAGGTGGAAGGGCATA+AGG | - | Chr2:10809017-10809036 | MsG0280007112.01.T01:intron | 50.0% |
!! | GAATGTTGGTGATTCGAGGG+CGG | - | Chr2:10808876-10808895 | MsG0280007112.01.T01:intron | 50.0% |
!! | GGTGTTGAGTGTTGATCAGG+TGG | - | Chr2:10809005-10809024 | MsG0280007112.01.T01:intron | 50.0% |
!! | TGCGGTTCCAGAGGTGTTAA+CGG | - | Chr2:10809179-10809198 | MsG0280007112.01.T01:intron | 50.0% |
!! | TGGTGTTATTGCGGTTCCAG+AGG | - | Chr2:10809170-10809189 | MsG0280007112.01.T01:intron | 50.0% |
ATGGCAGCACATGCATCACG+GGG | + | Chr2:10810555-10810574 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | Chr2:10809708-10809727 | MsG0280007112.01.T01:intron | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | Chr2:10809711-10809730 | None:intergenic | 55.0% | |
GATGCATGTGCTGCCATTGC+TGG | - | Chr2:10810558-10810577 | MsG0280007112.01.T01:intron | 55.0% | |
GCTATGCTATAGCGCCGCTA+TGG | + | Chr2:10809469-10809488 | None:intergenic | 55.0% | |
!! | CGGTGTTGGCTGTTAAGGAC+GGG | - | Chr2:10808896-10808915 | MsG0280007112.01.T01:intron | 55.0% |
!! | GAGCCACCAATTGATGGTGC+AGG | + | Chr2:10808422-10808441 | None:intergenic | 55.0% |
!! | GCGGTGTTGGCTGTTAAGGA+CGG | - | Chr2:10808895-10808914 | MsG0280007112.01.T01:intron | 55.0% |
AAGGTTCAGGGTTCGGACCC+CGG | + | Chr2:10809665-10809684 | None:intergenic | 60.0% | |
GCAATCCGCGGTTGACGACT+AGG | - | Chr2:10809610-10809629 | MsG0280007112.01.T01:intron | 60.0% | |
TGGTGATTCGAGGGCGGTGT+TGG | - | Chr2:10808882-10808901 | MsG0280007112.01.T01:intron | 60.0% | |
!! | GAGGGCGGTGTTGGCTGTTA+AGG | - | Chr2:10808891-10808910 | MsG0280007112.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 10808383 | 10810890 | 10808383 | ID=MsG0280007112.01;Name=MsG0280007112.01 |
Chr2 | mRNA | 10808383 | 10810890 | 10808383 | ID=MsG0280007112.01.T01;Parent=MsG0280007112.01;Name=MsG0280007112.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.33|0.25|1|1|1|4|0|320 |
Chr2 | exon | 10810650 | 10810890 | 10810650 | ID=MsG0280007112.01.T01:exon:2582;Parent=MsG0280007112.01.T01 |
Chr2 | exon | 10809986 | 10810530 | 10809986 | ID=MsG0280007112.01.T01:exon:2581;Parent=MsG0280007112.01.T01 |
Chr2 | exon | 10808608 | 10808739 | 10808608 | ID=MsG0280007112.01.T01:exon:2580;Parent=MsG0280007112.01.T01 |
Chr2 | exon | 10808383 | 10808427 | 10808383 | ID=MsG0280007112.01.T01:exon:2579;Parent=MsG0280007112.01.T01 |
Chr2 | CDS | 10810650 | 10810890 | 10810650 | ID=MsG0280007112.01.T01:cds;Parent=MsG0280007112.01.T01 |
Chr2 | CDS | 10809986 | 10810530 | 10809986 | ID=MsG0280007112.01.T01:cds;Parent=MsG0280007112.01.T01 |
Chr2 | CDS | 10808608 | 10808739 | 10808608 | ID=MsG0280007112.01.T01:cds;Parent=MsG0280007112.01.T01 |
Chr2 | CDS | 10808383 | 10808427 | 10808383 | ID=MsG0280007112.01.T01:cds;Parent=MsG0280007112.01.T01 |
Gene Sequence |
Protein sequence |