AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005811.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005811.01.T01 MTR_1g107380 97.297 481 13 0 1 481 1 481 0.0 966
MsG0180005811.01.T01 MTR_4g095008 46.072 471 238 4 9 474 7 466 1.33e-155 453
MsG0180005811.01.T01 MTR_4g094920 46.497 471 236 4 9 474 22 481 5.41e-146 427
MsG0180005811.01.T01 MTR_5g016480 43.008 472 258 8 9 473 4 471 7.67e-133 393
MsG0180005811.01.T01 MTR_3g049970 41.509 477 248 12 12 472 8 469 6.61e-118 355
MsG0180005811.01.T01 MTR_1g032490 41.772 474 253 11 11 472 8 470 2.70e-114 345
MsG0180005811.01.T01 MTR_8g064870 39.158 475 270 10 9 472 7 473 5.34e-114 345
MsG0180005811.01.T01 MTR_6g038200 38.745 462 257 8 13 469 11 451 1.54e-113 343
MsG0180005811.01.T01 MTR_1g107375 40.948 464 254 8 12 472 7 453 6.19e-113 341
MsG0180005811.01.T01 MTR_6g038230 39.394 462 254 9 13 469 11 451 2.61e-112 339
MsG0180005811.01.T01 MTR_6g038220 39.496 476 255 11 1 469 1 450 3.74e-112 339
MsG0180005811.01.T01 MTR_6g038240 38.994 477 262 11 5 474 2 456 3.88e-112 339
MsG0180005811.01.T01 MTR_7g080935 39.916 476 256 11 4 473 2 453 9.42e-111 336
MsG0180005811.01.T01 MTR_7g080940 38.703 478 268 10 4 478 2 457 9.55e-111 335
MsG0180005811.01.T01 MTR_8g083290 38.075 478 260 13 14 473 5 464 3.64e-110 334
MsG0180005811.01.T01 MTR_1g107315 40.530 491 256 14 13 480 8 485 7.05e-110 334
MsG0180005811.01.T01 MTR_1g107350 39.662 474 261 11 12 472 7 468 1.66e-109 333
MsG0180005811.01.T01 MTR_1g107365 40.389 463 259 7 12 472 44 491 8.34e-109 332
MsG0180005811.01.T01 MTR_8g064880 39.112 473 271 8 12 472 8 475 8.89e-106 323
MsG0180005811.01.T01 MTR_6g038300 36.345 476 274 10 4 472 2 455 1.23e-105 322
MsG0180005811.01.T01 MTR_5g035580 36.975 476 269 10 12 481 12 462 1.25e-104 320
MsG0180005811.01.T01 MTR_7g080950 39.019 469 256 11 11 473 4 448 9.46e-104 318
MsG0180005811.01.T01 MTR_8g083280 37.967 482 256 14 14 476 8 465 2.81e-103 317
MsG0180005811.01.T01 MTR_3g084530 35.950 484 269 12 13 472 6 472 1.68e-102 315
MsG0180005811.01.T01 MTR_5g035560 36.461 469 265 11 12 473 10 452 3.34e-100 310
MsG0180005811.01.T01 MTR_8g088560 38.034 468 264 9 12 472 9 457 6.07e-100 308
MsG0180005811.01.T01 MTR_1g107360 37.844 473 263 12 12 472 8 461 9.85e-100 308
MsG0180005811.01.T01 MTR_3g084540 35.343 481 277 13 13 472 6 473 5.05e-99 306
MsG0180005811.01.T01 MTR_3g084520 36.250 480 273 12 13 472 6 472 1.55e-98 305
MsG0180005811.01.T01 MTR_1g107285 37.448 478 279 9 12 481 7 472 6.67e-97 300
MsG0180005811.01.T01 MTR_7g080900 36.887 469 266 11 12 473 11 456 1.16e-92 289
MsG0180005811.01.T01 MTR_6g014220 33.472 481 290 14 13 474 10 479 3.22e-81 260
MsG0180005811.01.T01 MTR_3g008010 31.902 489 287 12 13 474 10 479 2.15e-78 253
MsG0180005811.01.T01 MTR_6g013960 31.006 487 296 9 13 474 10 481 4.83e-78 252
MsG0180005811.01.T01 MTR_6g014040 31.377 494 286 13 13 474 10 482 9.08e-78 251
MsG0180005811.01.T01 MTR_6g014290 30.832 493 287 13 13 474 10 479 1.81e-76 248
MsG0180005811.01.T01 MTR_6g013450 30.461 499 292 12 9 474 6 482 1.08e-75 246
MsG0180005811.01.T01 MTR_5g464810 32.568 479 295 10 13 474 12 479 1.25e-75 245
MsG0180005811.01.T01 MTR_5g064240 32.568 479 295 10 13 474 12 479 1.25e-75 245
MsG0180005811.01.T01 MTR_6g014250 31.601 481 299 14 13 474 10 479 1.69e-75 245
MsG0180005811.01.T01 MTR_0036s0220 32.787 488 282 14 13 474 12 479 9.38e-75 243
MsG0180005811.01.T01 MTR_6g014020 30.938 501 290 14 6 474 5 481 3.02e-74 242
MsG0180005811.01.T01 MTR_6g014270 30.081 492 296 10 13 474 7 480 7.46e-74 241
MsG0180005811.01.T01 MTR_8g059425 30.567 494 287 10 13 474 10 479 8.89e-74 241
MsG0180005811.01.T01 MTR_6g014310 31.537 501 297 14 1 474 1 482 2.44e-73 239
MsG0180005811.01.T01 MTR_6g014170 32.317 492 265 15 13 474 10 463 7.98e-73 238
MsG0180005811.01.T01 MTR_6g014187 30.185 487 300 11 13 474 10 481 2.27e-72 237
MsG0180005811.01.T01 MTR_6g013440 30.629 493 290 12 13 474 11 482 3.27e-72 237
MsG0180005811.01.T01 MTR_5g058320 30.266 489 292 11 8 474 5 466 4.63e-72 236
MsG0180005811.01.T01 MTR_4g094220 31.818 484 288 14 13 469 7 475 5.55e-72 236
MsG0180005811.01.T01 MTR_7g011470 32.000 475 289 11 13 474 10 463 5.65e-72 236
MsG0180005811.01.T01 MTR_2g008210 30.561 481 302 12 13 474 11 478 7.52e-72 236
MsG0180005811.01.T01 MTR_7g011470 31.733 479 289 11 13 474 10 467 7.74e-72 235
MsG0180005811.01.T01 MTR_5g464760 31.070 486 295 11 13 474 12 481 4.26e-70 231
MsG0180005811.01.T01 MTR_6g014150 30.595 487 298 10 13 474 7 478 5.73e-70 231
MsG0180005811.01.T01 MTR_6g014200 30.801 487 297 10 13 474 7 478 1.25e-69 230
MsG0180005811.01.T01 MTR_6g011340 30.800 500 292 12 6 474 5 481 2.11e-69 229
MsG0180005811.01.T01 MTR_0288s0020 30.162 494 272 12 13 474 10 462 2.30e-69 229
MsG0180005811.01.T01 MTR_6g014050 31.055 512 285 13 1 474 1 482 2.72e-68 226
MsG0180005811.01.T01 MTR_3g479520 29.209 493 313 12 3 473 5 483 1.37e-66 222
MsG0180005811.01.T01 MTR_6g013990 30.785 484 299 13 13 474 10 479 2.40e-66 221
MsG0180005811.01.T01 MTR_3g479490 28.926 484 310 13 11 473 4 474 7.82e-66 220
MsG0180005811.01.T01 MTR_6g014300 28.947 494 281 13 13 474 12 467 5.07e-65 217
MsG0180005811.01.T01 MTR_6g013900 28.257 499 305 11 6 474 5 480 1.34e-64 216
MsG0180005811.01.T01 MTR_6g014240 28.810 479 291 11 11 474 5 448 2.26e-64 215
MsG0180005811.01.T01 MTR_3g479470 31.818 484 287 16 13 471 13 478 4.14e-64 215
MsG0180005811.01.T01 MTR_6g013920 28.685 502 305 11 6 477 5 483 1.31e-63 214
MsG0180005811.01.T01 MTR_3g069710 31.237 477 274 13 14 473 13 452 1.35e-63 213
MsG0180005811.01.T01 MTR_7g013220 28.602 465 304 7 13 470 5 448 3.15e-63 212
MsG0180005811.01.T01 MTR_7g013200 28.726 463 295 8 13 470 5 437 1.53e-62 210
MsG0180005811.01.T01 MTR_7g013240 29.221 462 291 9 13 469 6 436 7.30e-61 206
MsG0180005811.01.T01 MTR_7g013260 28.694 467 288 10 13 469 6 437 1.99e-60 204
MsG0180005811.01.T01 MTR_3g079480 28.195 493 298 13 13 473 21 489 5.96e-60 204
MsG0180005811.01.T01 MTR_5g031840 30.818 477 293 13 13 472 5 461 9.94e-60 203
MsG0180005811.01.T01 MTR_5g004940 38.365 318 149 8 177 477 95 382 1.64e-59 201
MsG0180005811.01.T01 MTR_5g004940 38.384 198 112 5 13 206 17 208 4.76e-33 129
MsG0180005811.01.T01 MTR_7g013180 30.000 470 285 17 13 470 5 442 7.88e-59 200
MsG0180005811.01.T01 MTR_6g014190 33.333 291 184 4 188 474 4 288 9.14e-59 196
MsG0180005811.01.T01 MTR_4g485630 29.817 493 297 15 11 476 7 477 1.11e-57 198
MsG0180005811.01.T01 MTR_7g070610 28.571 504 310 15 1 472 1 486 3.20e-57 197
MsG0180005811.01.T01 MTR_5g031830 31.902 489 286 18 7 472 6 470 3.47e-55 191
MsG0180005811.01.T01 MTR_5g072860 29.569 487 279 16 13 473 18 466 8.62e-55 190
MsG0180005811.01.T01 MTR_5g045970 29.821 503 288 17 12 473 15 493 3.22e-53 187
MsG0180005811.01.T01 MTR_5g075440 27.754 472 305 13 13 473 10 456 3.44e-53 186
MsG0180005811.01.T01 MTR_3g069690 29.661 472 292 15 13 473 8 450 1.23e-52 184
MsG0180005811.01.T01 MTR_5g031860 31.303 476 293 16 13 472 12 469 1.26e-52 184
MsG0180005811.01.T01 MTR_7g070940 28.571 483 307 15 11 472 7 472 1.27e-52 185
MsG0180005811.01.T01 MTR_7g102550 29.065 492 304 15 13 473 9 486 1.82e-52 184
MsG0180005811.01.T01 MTR_3g031400 29.114 474 290 14 13 477 18 454 3.90e-52 183
MsG0180005811.01.T01 MTR_3g479610 31.667 300 190 6 182 473 21 313 5.07e-52 179
MsG0180005811.01.T01 MTR_8g066610 28.488 516 297 19 5 480 2 485 5.16e-52 183
MsG0180005811.01.T01 MTR_8g009050 34.232 371 202 11 123 468 109 462 6.21e-52 182
MsG0180005811.01.T01 MTR_8g008990 30.435 483 287 15 12 468 5 464 6.40e-52 182
MsG0180005811.01.T01 MTR_8g043470 29.288 379 219 6 106 474 40 379 1.25e-51 179
MsG0180005811.01.T01 MTR_3g031450 28.421 475 294 14 13 477 18 456 1.64e-51 182
MsG0180005811.01.T01 MTR_4g064987 29.487 468 274 17 22 473 17 444 2.25e-51 181
MsG0180005811.01.T01 MTR_7g070930 28.630 489 309 15 11 472 12 487 4.07e-51 181
MsG0180005811.01.T01 MTR_4g064987 29.211 469 280 16 22 473 17 450 5.21e-51 180
MsG0180005811.01.T01 MTR_7g046490 33.239 355 202 10 135 469 121 460 6.41e-51 180
MsG0180005811.01.T01 MTR_5g072830 28.092 477 288 14 13 472 10 448 1.27e-50 179
MsG0180005811.01.T01 MTR_0477s0010 30.717 293 167 2 182 474 62 318 4.34e-50 174
MsG0180005811.01.T01 MTR_6g033725 30.682 352 212 10 135 470 124 459 4.37e-50 178
MsG0180005811.01.T01 MTR_5g072810 28.602 472 295 15 13 472 12 453 6.48e-50 177
MsG0180005811.01.T01 MTR_7g055710 27.419 496 317 15 4 471 2 482 7.42e-50 177
MsG0180005811.01.T01 MTR_6g033625 28.571 469 294 14 14 461 5 453 7.45e-50 177
MsG0180005811.01.T01 MTR_8g007585 38.278 209 125 1 266 474 189 393 7.47e-50 175
MsG0180005811.01.T01 MTR_8g009055 38.491 265 134 6 223 468 208 462 1.41e-49 176
MsG0180005811.01.T01 MTR_7g117405 28.600 500 288 18 13 473 12 481 1.72e-49 176
MsG0180005811.01.T01 MTR_8g009073 30.550 491 272 17 12 468 5 460 1.90e-49 176
MsG0180005811.01.T01 MTR_5g072840 28.361 476 290 14 13 473 10 449 2.74e-49 175
MsG0180005811.01.T01 MTR_7g071040 27.403 489 315 15 11 472 15 490 6.16e-49 175
MsG0180005811.01.T01 MTR_6g014186 26.078 487 282 12 13 474 7 440 7.85e-49 174
MsG0180005811.01.T01 MTR_6g033675 26.446 484 289 13 21 470 12 462 8.91e-49 174
MsG0180005811.01.T01 MTR_0536s0020 28.221 489 297 12 14 474 19 481 8.99e-49 174
MsG0180005811.01.T01 MTR_0891s0010 29.932 294 191 6 188 473 4 290 1.26e-48 169
MsG0180005811.01.T01 MTR_8g009063 29.630 486 285 17 12 468 12 469 1.34e-48 174
MsG0180005811.01.T01 MTR_4g117960 28.427 496 311 13 4 472 2 480 1.68e-48 174
MsG0180005811.01.T01 MTR_7g047030 27.755 490 295 19 13 472 6 466 1.83e-48 173
MsG0180005811.01.T01 MTR_7g047270 27.755 490 295 19 13 472 6 466 1.83e-48 173
MsG0180005811.01.T01 MTR_8g009067 31.054 351 212 7 137 469 5 343 2.03e-48 170
MsG0180005811.01.T01 MTR_7g070800 28.340 494 306 16 8 472 1 475 2.23e-48 174
MsG0180005811.01.T01 MTR_8g009067 30.623 369 218 8 127 469 105 461 3.25e-48 172
MsG0180005811.01.T01 MTR_8g027885 33.152 368 206 12 120 465 116 465 6.09e-48 172
MsG0180005811.01.T01 MTR_7g070910 26.892 502 315 14 4 472 2 484 7.64e-48 172
MsG0180005811.01.T01 MTR_8g012650 30.851 376 220 12 123 472 110 471 1.03e-47 171
MsG0180005811.01.T01 MTR_6g033660 26.947 475 311 12 14 470 5 461 1.03e-47 171
MsG0180005811.01.T01 MTR_5g072820 28.330 473 292 14 13 472 10 448 1.27e-47 171
MsG0180005811.01.T01 MTR_0184s0030 29.508 366 232 7 123 472 112 467 1.89e-47 171
MsG0180005811.01.T01 MTR_5g090660 26.869 495 300 14 14 473 6 473 2.45e-47 172
MsG0180005811.01.T01 MTR_8g009073 33.235 340 189 10 153 469 8 332 3.16e-47 167
MsG0180005811.01.T01 MTR_2g059240 27.869 488 320 11 1 474 1 470 4.73e-47 169
MsG0180005811.01.T01 MTR_7g070780 26.955 486 318 13 12 472 10 483 4.86e-47 170
MsG0180005811.01.T01 MTR_1g019510 29.745 353 213 9 137 469 123 460 5.03e-47 169
MsG0180005811.01.T01 MTR_4g031800 29.293 495 293 19 6 470 3 470 9.82e-47 169
MsG0180005811.01.T01 MTR_7g070660 27.108 498 300 17 11 472 9 479 1.02e-46 169
MsG0180005811.01.T01 MTR_8g027870 31.818 374 203 11 120 465 116 465 1.09e-46 169
MsG0180005811.01.T01 MTR_4g117980 28.514 498 309 16 4 472 2 481 1.35e-46 169
MsG0180005811.01.T01 MTR_7g070740 26.899 487 319 13 11 472 9 483 1.84e-46 168
MsG0180005811.01.T01 MTR_5g090670 26.518 494 307 14 14 473 6 477 1.87e-46 168
MsG0180005811.01.T01 MTR_4g024020 28.994 507 297 20 8 473 4 488 1.88e-46 168
MsG0180005811.01.T01 MTR_0184s0040 27.310 487 300 12 12 471 20 479 3.36e-46 167
MsG0180005811.01.T01 MTR_0078s0190 27.310 487 300 12 12 471 20 479 3.36e-46 167
MsG0180005811.01.T01 MTR_8g465670 34.768 302 164 7 188 469 179 467 4.11e-46 167
MsG0180005811.01.T01 MTR_7g070810 25.620 484 323 14 11 472 7 475 4.59e-46 167
MsG0180005811.01.T01 MTR_6g023665 31.507 365 214 11 122 465 115 464 5.11e-46 167
MsG0180005811.01.T01 MTR_4g108250 25.904 498 314 15 11 472 9 487 6.17e-46 167
MsG0180005811.01.T01 MTR_4g128690 28.298 470 291 13 12 469 14 449 7.36e-46 166
MsG0180005811.01.T01 MTR_7g117170 27.419 496 299 15 1 465 3 468 7.88e-46 166
MsG0180005811.01.T01 MTR_7g102460 28.599 514 297 23 1 473 1 485 1.75e-45 166
MsG0180005811.01.T01 MTR_0078s0010 26.380 489 303 17 13 472 6 466 2.33e-45 165
MsG0180005811.01.T01 MTR_7g102560 27.655 499 306 15 10 473 6 484 2.68e-45 165
MsG0180005811.01.T01 MTR_7g070860 27.310 487 300 15 11 472 5 462 3.12e-45 165
MsG0180005811.01.T01 MTR_7g102450 28.571 483 302 17 13 473 11 472 3.22e-45 165
MsG0180005811.01.T01 MTR_8g006260 30.871 379 200 13 120 463 109 460 3.99e-45 164
MsG0180005811.01.T01 MTR_5g098930 28.571 392 228 10 116 473 95 468 1.02e-44 163
MsG0180005811.01.T01 MTR_8g012635 29.793 386 237 10 106 468 93 467 1.10e-44 163
MsG0180005811.01.T01 MTR_8g012630 40.670 209 108 4 276 468 203 411 2.15e-44 161
MsG0180005811.01.T01 MTR_7g102490 28.952 525 304 23 1 480 1 501 2.39e-44 163
MsG0180005811.01.T01 MTR_8g077590 29.539 369 219 10 123 468 112 462 2.45e-44 162
MsG0180005811.01.T01 MTR_4g485620 30.811 370 228 12 121 472 95 454 5.38e-44 161
MsG0180005811.01.T01 MTR_6g035185 26.465 495 324 12 4 472 2 482 5.55e-44 162
MsG0180005811.01.T01 MTR_5g090700 27.179 390 232 12 117 473 107 477 5.99e-44 161
MsG0180005811.01.T01 MTR_1g062380 27.823 496 308 17 12 473 15 494 6.17e-44 162
MsG0180005811.01.T01 MTR_4g118000 28.364 483 289 14 16 472 15 466 7.92e-44 161
MsG0180005811.01.T01 MTR_2g034990 26.572 493 325 11 4 472 2 481 1.07e-43 161
MsG0180005811.01.T01 MTR_2g035020 26.761 497 319 12 4 472 2 481 1.36e-43 160
MsG0180005811.01.T01 MTR_5g070090 29.950 404 236 14 89 472 85 461 1.61e-43 160
MsG0180005811.01.T01 MTR_8g006730 33.333 309 179 8 173 465 162 459 1.63e-43 160
MsG0180005811.01.T01 MTR_6g488280 30.357 392 240 11 92 465 81 457 1.65e-43 160
MsG0180005811.01.T01 MTR_0428s0010 30.357 392 240 11 92 465 81 457 1.65e-43 160
MsG0180005811.01.T01 MTR_8g008970 29.539 369 222 8 127 469 105 461 1.70e-43 164
MsG0180005811.01.T01 MTR_8g008970 35.401 274 156 7 203 468 524 784 1.37e-38 150
MsG0180005811.01.T01 MTR_5g087620 28.850 513 303 23 3 473 2 494 2.53e-43 160
MsG0180005811.01.T01 MTR_6g033615 28.919 370 218 12 113 461 94 439 3.07e-43 159
MsG0180005811.01.T01 MTR_3g009510 28.250 400 234 11 109 469 88 473 3.57e-43 159
MsG0180005811.01.T01 MTR_5g090610 28.989 376 217 11 123 472 109 460 4.58e-43 159
MsG0180005811.01.T01 MTR_2g098430 29.470 509 285 22 14 480 7 483 4.82e-43 159
MsG0180005811.01.T01 MTR_4g117950 27.105 487 300 14 12 472 5 462 6.25e-43 158
MsG0180005811.01.T01 MTR_6g035265 29.708 377 217 11 126 472 115 473 1.43e-42 157
MsG0180005811.01.T01 MTR_5g098960 26.096 479 312 15 14 481 8 455 1.52e-42 157
MsG0180005811.01.T01 MTR_4g485590 30.073 409 236 13 13 409 9 379 1.58e-42 156
MsG0180005811.01.T01 MTR_5g045960 27.381 504 299 16 12 473 8 486 1.99e-42 157
MsG0180005811.01.T01 MTR_7g012120 26.962 497 309 13 7 472 10 483 2.08e-42 157
MsG0180005811.01.T01 MTR_4g128720 26.483 472 302 13 11 469 13 452 2.57e-42 156
MsG0180005811.01.T01 MTR_8g012745 33.441 311 171 11 180 468 168 464 2.88e-42 157
MsG0180005811.01.T01 MTR_8g006220 34.839 310 162 7 188 469 178 475 3.92e-42 156
MsG0180005811.01.T01 MTR_1g019520 36.667 210 118 3 276 471 3 211 4.07e-42 149
MsG0180005811.01.T01 MTR_2g035040 29.301 372 230 9 125 472 24 386 4.17e-42 154
MsG0180005811.01.T01 MTR_0536s0010 26.176 489 321 11 2 472 10 476 1.03e-41 155
MsG0180005811.01.T01 MTR_7g102520 28.313 498 308 20 11 475 10 491 1.15e-41 155
MsG0180005811.01.T01 MTR_5g029800 26.358 497 317 13 4 472 2 477 2.21e-41 154
MsG0180005811.01.T01 MTR_4g117890 25.904 498 314 13 1 470 2 472 3.51e-41 154
MsG0180005811.01.T01 MTR_0078s0060 27.140 479 290 16 12 460 5 454 3.55e-41 154
MsG0180005811.01.T01 MTR_8g006710 34.783 276 155 6 212 472 200 465 3.73e-41 153
MsG0180005811.01.T01 MTR_5g090580 24.847 491 317 13 14 473 6 475 1.17e-40 152
MsG0180005811.01.T01 MTR_5g090620 25.852 499 303 16 14 473 6 476 1.62e-40 152
MsG0180005811.01.T01 MTR_8g012730 39.320 206 109 4 279 468 99 304 1.72e-40 148
MsG0180005811.01.T01 MTR_5g067170 26.708 483 311 11 16 472 14 479 1.84e-40 152
MsG0180005811.01.T01 MTR_5g090630 25.553 497 299 15 13 473 5 466 2.00e-40 151
MsG0180005811.01.T01 MTR_8g006270 29.867 375 221 12 120 469 103 460 4.93e-40 150
MsG0180005811.01.T01 MTR_4g082820 28.310 491 283 19 12 469 6 460 4.99e-40 150
MsG0180005811.01.T01 MTR_4g008630 24.593 492 304 17 9 472 10 462 5.35e-40 150
MsG0180005811.01.T01 MTR_1g029540 32.340 235 142 5 248 472 232 459 5.98e-40 150
MsG0180005811.01.T01 MTR_5g090600 26.615 387 231 11 111 473 97 454 1.07e-39 149
MsG0180005811.01.T01 MTR_2g040530 27.427 412 247 14 91 472 75 464 1.49e-39 149
MsG0180005811.01.T01 MTR_6g005600 29.945 364 219 9 120 461 107 456 1.91e-39 149
MsG0180005811.01.T01 MTR_7g071050 25.210 476 285 12 1 457 1 424 2.32e-39 148
MsG0180005811.01.T01 MTR_4g485640 31.044 364 222 12 126 469 309 663 3.81e-39 150
MsG0180005811.01.T01 MTR_5g016660 25.800 500 321 14 5 472 2 483 4.00e-39 148
MsG0180005811.01.T01 MTR_2g046750 26.423 492 303 17 11 472 3 465 5.20e-39 147
MsG0180005811.01.T01 MTR_0009s0240 28.302 477 300 14 13 472 7 458 5.75e-39 147
MsG0180005811.01.T01 MTR_5g040030 24.797 492 322 15 12 472 13 487 7.62e-39 147
MsG0180005811.01.T01 MTR_6g013680 28.392 398 198 11 106 474 37 376 1.11e-38 145
MsG0180005811.01.T01 MTR_2g046820 27.073 410 249 13 91 472 75 462 1.70e-38 146
MsG0180005811.01.T01 MTR_7g070870 25.208 480 303 15 11 472 17 458 4.23e-38 145
MsG0180005811.01.T01 MTR_5g072850 30.671 313 181 9 170 478 107 387 7.34e-37 140
MsG0180005811.01.T01 MTR_8g466240 25.103 486 304 14 10 472 5 453 1.29e-36 140
MsG0180005811.01.T01 MTR_1g040310 26.719 509 310 21 1 472 1 483 1.59e-36 141
MsG0180005811.01.T01 MTR_2086s0010 35.227 176 109 2 299 473 1 172 1.72e-36 133
MsG0180005811.01.T01 MTR_1996s0010 35.227 176 109 2 299 473 1 172 1.72e-36 133
MsG0180005811.01.T01 MTR_1g107340 36.364 242 147 5 12 250 7 244 2.07e-36 135
MsG0180005811.01.T01 MTR_8g032950 25.562 489 317 12 12 472 11 480 3.85e-36 140
MsG0180005811.01.T01 MTR_5g070040 35.424 271 145 10 221 475 213 469 4.22e-36 139
MsG0180005811.01.T01 MTR_8g090095 33.014 209 127 4 277 472 271 479 6.49e-36 139
MsG0180005811.01.T01 MTR_4g082810 28.230 418 244 15 12 401 6 395 6.79e-36 138
MsG0180005811.01.T01 MTR_1g107325 48.507 134 67 1 341 472 219 352 7.65e-36 136
MsG0180005811.01.T01 MTR_1g107325 28.824 170 113 5 124 289 62 227 3.12e-15 77.4
MsG0180005811.01.T01 MTR_6g078320 26.233 507 309 17 1 471 1 478 7.81e-36 139
MsG0180005811.01.T01 MTR_5g066390 38.509 161 95 1 313 473 59 215 1.05e-35 132
MsG0180005811.01.T01 MTR_6g014160 26.777 422 191 14 81 474 63 394 1.64e-35 136
MsG0180005811.01.T01 MTR_8g044140 27.882 373 232 12 126 472 87 448 9.82e-35 135
MsG0180005811.01.T01 MTR_8g071070 26.042 480 315 12 11 469 5 465 1.29e-34 135
MsG0180005811.01.T01 MTR_5g019580 24.314 510 324 14 8 480 2 486 1.35e-34 135
MsG0180005811.01.T01 MTR_6g014185 32.031 256 132 9 223 473 127 345 1.38e-34 133
MsG0180005811.01.T01 MTR_5g019580 23.960 505 308 16 6 480 52 510 6.11e-34 134
MsG0180005811.01.T01 MTR_5g039900 24.082 490 325 13 12 472 12 483 2.69e-33 132
MsG0180005811.01.T01 MTR_7g080960 33.333 228 99 5 248 473 295 471 2.95e-33 131
MsG0180005811.01.T01 MTR_7g080960 33.475 236 131 7 12 241 11 226 1.27e-27 115
MsG0180005811.01.T01 MTR_7g470610 37.306 193 115 3 223 409 75 267 2.95e-33 127
MsG0180005811.01.T01 MTR_7g070583 37.306 193 115 3 223 409 75 267 2.95e-33 127
MsG0180005811.01.T01 MTR_8g074550 26.157 497 292 20 13 461 8 477 1.54e-32 130
MsG0180005811.01.T01 MTR_6g035295 26.626 492 312 17 12 472 11 484 2.20e-32 129
MsG0180005811.01.T01 MTR_3g009490 34.973 183 103 4 303 469 3 185 3.48e-31 119
MsG0180005811.01.T01 MTR_7g067330 30.686 277 161 11 210 476 176 431 4.28e-30 122
MsG0180005811.01.T01 MTR_6g042310 25.000 500 298 18 12 481 17 469 6.02e-30 122
MsG0180005811.01.T01 MTR_8g009840 35.079 191 106 3 294 468 333 521 8.44e-30 122
MsG0180005811.01.T01 MTR_7g039550 29.119 261 169 5 227 472 2 261 4.49e-29 115
MsG0180005811.01.T01 MTR_4g123553 25.708 459 299 16 3 447 6 436 5.02e-29 119
MsG0180005811.01.T01 MTR_7g067120 30.417 240 143 9 245 481 216 434 1.26e-28 117
MsG0180005811.01.T01 MTR_8g068360 26.782 463 283 15 12 448 11 443 3.62e-28 117
MsG0180005811.01.T01 MTR_2g008226 24.686 478 291 16 5 447 2 445 1.61e-27 115
MsG0180005811.01.T01 MTR_8g068340 25.806 465 286 13 12 448 11 444 1.83e-27 115
MsG0180005811.01.T01 MTR_6g014000 40.000 125 71 1 344 468 31 151 5.48e-27 114
MsG0180005811.01.T01 MTR_2g008225 25.478 471 290 17 3 447 6 441 8.98e-27 113
MsG0180005811.01.T01 MTR_2g046620 27.757 263 175 8 223 481 216 467 9.71e-27 112
MsG0180005811.01.T01 MTR_2g008220 31.739 230 142 7 224 447 220 440 2.21e-26 112
MsG0180005811.01.T01 MTR_6g013890 27.586 261 125 7 182 438 40 240 9.47e-26 106
MsG0180005811.01.T01 MTR_7g070760 32.536 209 115 3 213 418 23 208 1.12e-25 104
MsG0180005811.01.T01 MTR_8g068330 35.429 175 108 4 278 448 267 440 1.67e-25 109
MsG0180005811.01.T01 MTR_6g036650 24.449 499 309 19 12 481 17 476 2.49e-25 108
MsG0180005811.01.T01 MTR_5g027210 24.109 477 275 16 14 435 5 449 7.74e-25 107
MsG0180005811.01.T01 MTR_6g013435 23.810 336 198 9 147 474 23 308 1.11e-24 104
MsG0180005811.01.T01 MTR_5g090690 26.629 353 193 13 123 461 69 369 4.18e-24 103
MsG0180005811.01.T01 MTR_4g077960 28.384 229 153 7 224 448 193 414 1.55e-22 100
MsG0180005811.01.T01 MTR_8g056740 36.126 191 113 6 223 409 114 299 3.03e-22 99.0
MsG0180005811.01.T01 MTR_4g059370 30.435 230 138 7 212 432 133 349 6.08e-22 97.8
MsG0180005811.01.T01 MTR_8g007650 23.251 486 322 15 3 469 2 455 6.81e-22 98.6
MsG0180005811.01.T01 MTR_8g007565 27.668 253 169 6 221 469 213 455 1.93e-21 97.4
MsG0180005811.01.T01 MTR_7g070995 31.944 144 88 2 339 472 1 144 2.41e-21 90.9
MsG0180005811.01.T01 MTR_0536s0030 33.333 162 90 5 329 472 190 351 4.48e-21 95.1
MsG0180005811.01.T01 MTR_3g435310 27.317 205 140 5 279 481 228 425 5.34e-20 92.4
MsG0180005811.01.T01 MTR_5g066410 28.378 222 140 7 221 430 185 399 1.78e-19 91.3
MsG0180005811.01.T01 MTR_1g090270 26.809 235 149 7 212 436 206 427 5.10e-18 86.7
MsG0180005811.01.T01 MTR_4g079270 29.032 217 137 8 230 441 220 424 2.09e-17 85.1
MsG0180005811.01.T01 MTR_2g014900 29.016 193 123 5 271 459 250 432 4.27e-17 84.0
MsG0180005811.01.T01 MTR_4g079250 28.161 174 121 3 279 448 261 434 1.27e-16 82.4
MsG0180005811.01.T01 MTR_2g083430 23.881 469 288 21 10 448 5 434 2.07e-15 78.6
MsG0180005811.01.T01 MTR_6g052375 26.948 308 148 12 175 465 21 268 3.76e-15 76.6
MsG0180005811.01.T01 MTR_8g083300 30.612 147 86 4 14 157 8 141 8.45e-15 72.4
MsG0180005811.01.T01 MTR_1g090280 28.972 107 74 2 334 438 172 278 3.02e-11 65.1
MsG0180005811.01.T01 MTR_2g083420 27.273 220 115 10 230 442 220 401 3.29e-11 65.5
MsG0180005811.01.T01 MTR_0184s0010 32.222 90 61 0 382 471 4 93 3.85e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005811.01.T01 AT2G23250 45.119 461 229 9 16 475 1 438 5.39e-135 397
MsG0180005811.01.T01 AT2G23260 44.280 472 233 10 11 475 8 456 1.01e-134 397
MsG0180005811.01.T01 AT4G15490 40.710 479 255 9 13 477 8 471 1.30e-122 367
MsG0180005811.01.T01 AT3G21560 40.638 470 260 9 13 472 12 472 2.39e-121 364
MsG0180005811.01.T01 AT4G15480 39.400 467 271 7 12 472 18 478 1.13e-119 360
MsG0180005811.01.T01 AT4G15500 40.860 465 261 5 13 473 9 463 2.29e-118 356
MsG0180005811.01.T01 AT1G05680 36.069 463 271 8 13 469 6 449 5.67e-104 318
MsG0180005811.01.T01 AT1G05675 37.446 462 266 9 13 469 6 449 1.88e-103 317
MsG0180005811.01.T01 AT4G15550 37.263 475 267 11 13 471 13 472 7.02e-98 303
MsG0180005811.01.T01 AT2G31750 36.017 472 275 11 9 473 4 455 1.16e-97 302
MsG0180005811.01.T01 AT2G31750 36.076 474 276 11 9 475 4 457 3.13e-97 302
MsG0180005811.01.T01 AT4G14090 37.313 469 257 14 13 471 13 454 3.33e-96 298
MsG0180005811.01.T01 AT2G31790 35.837 466 270 10 13 469 8 453 3.43e-96 298
MsG0180005811.01.T01 AT2G43820 36.887 469 258 12 13 472 7 446 3.21e-94 293
MsG0180005811.01.T01 AT2G43840 34.322 472 270 13 13 474 7 448 1.85e-93 291
MsG0180005811.01.T01 AT2G43840 34.322 472 270 13 13 474 7 448 2.19e-92 288
MsG0180005811.01.T01 AT1G05530 34.874 476 270 12 13 473 5 455 7.18e-91 284
MsG0180005811.01.T01 AT1G05560 34.232 482 276 13 13 480 5 459 2.45e-89 281
MsG0180005811.01.T01 AT1G05560 34.232 482 276 13 13 480 55 509 7.04e-89 281
MsG0180005811.01.T01 AT1G24100 34.304 481 278 14 5 472 3 458 8.05e-83 264
MsG0180005811.01.T01 AT1G22380 30.642 483 307 10 13 477 13 485 7.84e-76 246
MsG0180005811.01.T01 AT1G22340 31.524 479 303 11 13 474 13 483 2.12e-75 245
MsG0180005811.01.T01 AT1G22360 30.561 481 306 11 13 475 10 480 6.15e-74 241
MsG0180005811.01.T01 AT1G22400 30.977 481 305 9 13 475 13 484 6.53e-73 239
MsG0180005811.01.T01 AT2G28080 30.297 472 299 13 22 481 27 480 4.26e-70 231
MsG0180005811.01.T01 AT2G36970 28.964 473 311 11 13 472 10 470 2.27e-69 229
MsG0180005811.01.T01 AT1G78270 30.061 489 294 12 13 473 13 481 1.91e-68 227
MsG0180005811.01.T01 AT1G22360 29.522 481 299 11 13 475 10 468 2.07e-68 226
MsG0180005811.01.T01 AT1G22370 29.424 486 324 9 1 475 1 478 2.12e-67 224
MsG0180005811.01.T01 AT2G23210 41.958 286 143 7 11 292 8 274 1.04e-66 216
MsG0180005811.01.T01 AT5G59590 31.211 487 278 16 4 472 2 449 1.52e-63 213
MsG0180005811.01.T01 AT5G59580 30.753 478 274 16 13 472 9 447 7.31e-63 211
MsG0180005811.01.T01 AT2G36770 28.400 500 320 15 1 473 1 489 1.22e-59 204
MsG0180005811.01.T01 AT3G46680 28.866 485 284 14 7 470 3 447 3.82e-57 196
MsG0180005811.01.T01 AT3G46660 30.105 475 282 13 14 472 15 455 3.92e-57 196
MsG0180005811.01.T01 AT2G36780 27.811 507 328 15 1 480 1 496 1.15e-56 196
MsG0180005811.01.T01 AT5G38010 30.737 475 277 13 13 469 10 450 7.76e-56 192
MsG0180005811.01.T01 AT5G05870 30.000 480 291 11 11 474 6 456 1.76e-55 192
MsG0180005811.01.T01 AT2G15480 28.000 500 307 17 5 472 2 480 2.31e-55 192
MsG0180005811.01.T01 AT4G34131 29.835 486 303 15 11 472 8 479 3.46e-55 192
MsG0180005811.01.T01 AT5G38040 28.785 469 274 14 21 469 18 446 2.14e-54 189
MsG0180005811.01.T01 AT3G46670 29.958 474 278 15 13 469 9 445 2.72e-54 189
MsG0180005811.01.T01 AT2G15490 29.175 497 297 17 9 472 3 477 3.02e-54 189
MsG0180005811.01.T01 AT3G46690 30.297 472 280 15 13 469 9 446 4.59e-54 188
MsG0180005811.01.T01 AT4G34138 30.505 495 286 16 11 472 9 478 4.62e-54 189
MsG0180005811.01.T01 AT2G15480 27.843 510 305 17 5 472 2 490 6.76e-54 189
MsG0180005811.01.T01 AT2G36800 29.102 512 300 19 1 473 1 488 9.60e-54 188
MsG0180005811.01.T01 AT2G36750 29.259 499 305 19 6 473 3 484 1.09e-53 188
MsG0180005811.01.T01 AT4G01070 29.832 476 288 17 13 465 8 460 1.19e-53 187
MsG0180005811.01.T01 AT2G15490 28.800 500 298 17 9 472 3 480 2.98e-53 186
MsG0180005811.01.T01 AT2G36790 29.482 502 304 18 12 481 12 495 8.40e-53 186
MsG0180005811.01.T01 AT2G30150 28.964 473 290 13 13 472 13 452 1.08e-52 184
MsG0180005811.01.T01 AT3G02100 27.049 488 311 14 1 472 1 459 1.29e-52 184
MsG0180005811.01.T01 AT2G36760 27.000 500 327 14 1 473 1 489 2.19e-52 184
MsG0180005811.01.T01 AT3G53160 30.000 500 289 18 12 473 7 483 6.24e-52 183
MsG0180005811.01.T01 AT1G22370 33.779 299 189 4 182 475 14 308 8.88e-52 178
MsG0180005811.01.T01 AT3G46650 28.964 473 281 14 5 468 2 428 9.65e-52 181
MsG0180005811.01.T01 AT2G30150 29.247 465 283 14 21 472 5 436 1.90e-51 181
MsG0180005811.01.T01 AT4G34135 29.376 497 292 13 11 472 9 481 2.18e-51 181
MsG0180005811.01.T01 AT3G11340 28.216 482 296 15 4 473 2 445 3.18e-51 180
MsG0180005811.01.T01 AT2G30140 28.302 477 286 14 13 472 13 450 7.29e-51 179
MsG0180005811.01.T01 AT2G30140 28.243 478 286 14 13 472 13 451 1.26e-50 179
MsG0180005811.01.T01 AT3G16520 32.070 343 208 9 131 462 121 449 3.39e-50 178
MsG0180005811.01.T01 AT5G05880 28.632 475 292 14 12 472 7 448 5.81e-50 177
MsG0180005811.01.T01 AT3G46700 27.859 481 281 16 13 472 9 444 6.37e-50 177
MsG0180005811.01.T01 AT3G16520 32.653 343 204 10 131 458 121 451 1.40e-49 176
MsG0180005811.01.T01 AT3G46720 28.908 467 284 12 13 469 9 437 5.02e-49 174
MsG0180005811.01.T01 AT3G16520 33.133 332 195 10 131 447 121 440 1.20e-48 173
MsG0180005811.01.T01 AT4G15280 26.052 499 315 14 7 473 30 506 1.11e-47 172
MsG0180005811.01.T01 AT4G15280 25.859 495 313 14 11 473 2 474 2.70e-47 170
MsG0180005811.01.T01 AT5G05860 27.521 476 298 13 12 474 8 449 7.26e-47 169
MsG0180005811.01.T01 AT1G30530 27.564 468 304 12 13 473 12 451 1.45e-46 168
MsG0180005811.01.T01 AT5G17050 27.331 472 306 12 13 473 12 457 1.10e-45 166
MsG0180005811.01.T01 AT3G22250 26.737 475 277 15 7 445 2 441 1.29e-45 166
MsG0180005811.01.T01 AT5G05900 27.883 477 292 14 12 472 7 447 2.46e-45 164
MsG0180005811.01.T01 AT1G07260 27.016 496 308 16 8 473 1 472 3.46e-45 164
MsG0180005811.01.T01 AT3G55700 27.409 467 290 18 23 473 18 451 3.50e-45 164
MsG0180005811.01.T01 AT3G21790 29.351 385 223 9 120 472 111 478 3.82e-45 165
MsG0180005811.01.T01 AT5G17040 25.641 468 309 11 13 473 5 440 3.76e-44 161
MsG0180005811.01.T01 AT1G01420 28.571 476 293 15 13 465 8 459 1.65e-43 160
MsG0180005811.01.T01 AT3G55710 26.327 490 305 17 4 473 2 455 1.91e-43 159
MsG0180005811.01.T01 AT1G07250 29.440 411 254 15 83 473 79 473 2.20e-43 160
MsG0180005811.01.T01 AT1G01420 35.227 264 152 4 215 465 205 462 2.28e-43 160
MsG0180005811.01.T01 AT1G73880 27.126 494 307 18 3 473 4 467 3.47e-43 159
MsG0180005811.01.T01 AT3G21800 24.435 487 323 11 14 472 6 475 4.16e-42 156
MsG0180005811.01.T01 AT2G29740 26.556 482 317 16 11 470 6 472 1.02e-41 155
MsG0180005811.01.T01 AT2G16890 27.651 481 311 15 13 475 9 470 1.49e-41 155
MsG0180005811.01.T01 AT1G10400 25.673 483 311 15 11 471 5 461 4.39e-41 153
MsG0180005811.01.T01 AT5G05890 26.526 475 306 12 12 472 7 452 5.04e-41 153
MsG0180005811.01.T01 AT5G03490 28.421 475 292 16 13 471 19 461 9.50e-41 152
MsG0180005811.01.T01 AT5G17040 30.717 293 189 6 182 473 59 338 2.32e-40 148
MsG0180005811.01.T01 AT4G15260 27.446 368 228 8 131 473 2 355 4.65e-40 148
MsG0180005811.01.T01 AT1G01390 35.206 267 141 5 218 464 205 459 8.40e-40 150
MsG0180005811.01.T01 AT1G01390 35.206 267 141 5 218 464 222 476 9.17e-40 150
MsG0180005811.01.T01 AT5G66690 26.627 507 288 22 13 473 7 475 1.21e-39 149
MsG0180005811.01.T01 AT5G14860 26.735 490 313 18 13 475 8 478 1.49e-39 149
MsG0180005811.01.T01 AT3G21750 28.125 384 227 12 122 473 103 469 3.28e-39 148
MsG0180005811.01.T01 AT3G21780 24.230 487 324 10 11 472 2 468 9.13e-39 147
MsG0180005811.01.T01 AT3G53150 25.626 519 322 15 1 473 10 510 1.06e-38 147
MsG0180005811.01.T01 AT2G26480 27.536 483 286 16 13 474 8 447 1.66e-38 146
MsG0180005811.01.T01 AT5G26310 25.494 506 284 20 13 471 7 466 1.73e-38 146
MsG0180005811.01.T01 AT3G50740 26.946 501 289 20 13 471 7 472 1.96e-38 146
MsG0180005811.01.T01 AT3G21760 26.371 383 242 10 117 472 111 480 6.24e-38 145
MsG0180005811.01.T01 AT2G29750 25.466 483 326 16 11 473 6 474 2.72e-37 143
MsG0180005811.01.T01 AT5G17030 26.271 472 310 13 13 473 12 456 6.68e-37 141
MsG0180005811.01.T01 AT2G29730 26.769 325 203 10 158 473 165 463 2.93e-36 140
MsG0180005811.01.T01 AT5G37950 28.075 374 225 11 28 387 1 344 3.58e-36 137
MsG0180005811.01.T01 AT2G29710 26.235 324 207 9 158 473 164 463 2.08e-35 137
MsG0180005811.01.T01 AT1G07240 30.169 295 184 9 193 473 190 476 6.34e-35 136
MsG0180005811.01.T01 AT5G12890 26.415 371 245 9 126 479 129 488 1.37e-34 135
MsG0180005811.01.T01 AT4G36770 26.403 481 282 15 11 455 2 446 1.51e-34 135
MsG0180005811.01.T01 AT5G37950 27.493 371 225 11 28 387 1 338 2.15e-34 132
MsG0180005811.01.T01 AT1G06000 27.033 492 280 17 1 472 1 433 2.51e-34 134
MsG0180005811.01.T01 AT2G18560 30.745 322 176 10 173 465 66 369 3.32e-34 132
MsG0180005811.01.T01 AT2G16890 27.021 433 280 14 13 428 9 422 2.37e-33 131
MsG0180005811.01.T01 AT1G51210 25.561 446 287 14 8 442 17 428 3.21e-30 122
MsG0180005811.01.T01 AT2G18570 23.750 480 306 17 13 461 5 455 4.40e-29 119
MsG0180005811.01.T01 AT5G65550 30.531 226 142 8 223 444 220 434 8.34e-29 119
MsG0180005811.01.T01 AT4G34135 25.882 340 203 9 11 323 9 326 1.89e-22 98.6
MsG0180005811.01.T01 AT4G27570 22.951 488 301 17 11 472 5 443 4.82e-22 99.0
MsG0180005811.01.T01 AT2G22590 27.413 259 169 7 223 475 224 469 1.17e-21 97.8
MsG0180005811.01.T01 AT5G49690 27.059 255 159 9 223 473 217 448 2.57e-21 97.1
MsG0180005811.01.T01 AT3G29630 22.822 482 324 15 11 481 4 448 1.64e-20 94.4
MsG0180005811.01.T01 AT5G53990 30.387 181 120 4 273 448 238 417 1.62e-19 91.3
MsG0180005811.01.T01 AT3G29630 28.505 214 143 6 273 481 214 422 2.17e-19 90.9
MsG0180005811.01.T01 AT4G27560 22.129 479 316 16 11 472 5 443 3.28e-19 90.5
MsG0180005811.01.T01 AT5G54010 21.396 444 285 15 11 432 4 405 6.02e-19 89.7
MsG0180005811.01.T01 AT2G22930 21.545 492 304 17 8 472 1 437 3.72e-18 87.0
MsG0180005811.01.T01 AT1G64910 21.384 477 315 15 12 472 5 437 1.23e-17 85.5
MsG0180005811.01.T01 AT4G01070 25.895 363 223 16 13 353 8 346 1.47e-16 81.3
MsG0180005811.01.T01 AT1G50580 25.556 180 130 3 273 448 239 418 1.70e-16 82.0
MsG0180005811.01.T01 AT4G09500 21.962 469 286 18 8 448 1 417 2.68e-16 81.6
MsG0180005811.01.T01 AT5G54060 22.789 294 206 8 187 473 184 463 2.09e-14 75.9
MsG0180005811.01.T01 AT4G09500 26.705 176 123 4 278 448 218 392 2.50e-14 75.1
MsG0180005811.01.T01 AT1G64920 23.671 207 148 6 273 472 238 441 3.82e-12 68.6

Find 129 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAATTCCACGTCGATTTC+GGG 0.187714 1:+96444564 None:intergenic
CATTAAGGCCTTTGGTTAAA+AGG 0.194942 1:+96444988 None:intergenic
TGTATTCATCAGGGGATTTA+AGG 0.195702 1:+96444826 None:intergenic
AATGGGCCTACAGGTGTAAT+TGG 0.210652 1:+96444360 None:intergenic
ACCAATAGGACATGAATTTC+TGG 0.211648 1:+96445062 None:intergenic
GAGACTAATGGGACCGAATT+TGG 0.214605 1:+96444791 None:intergenic
AAGAATGAAGGGAGTGAATT+TGG 0.230383 1:+96445141 None:intergenic
AGCAAATTCTTTCTACGAAT+TGG 0.238092 1:-96444418 MsG0180005811.01.T01:CDS
GGGTAATTCCACGTCGATTT+CGG 0.251769 1:+96444563 None:intergenic
ATATCCCATGTGCTTGTCTT+TGG 0.268042 1:-96444662 MsG0180005811.01.T01:CDS
CTAGGATAGGAGGGAATCTT+TGG 0.293588 1:+96445221 None:intergenic
GAAACAAGCATTGCATTTGT+TGG 0.324145 1:+96443907 None:intergenic
TACGTAGGCAAGGATGATTT+TGG 0.332626 1:+96445295 None:intergenic
AGTAATGAAGGTGGAACTAA+TGG 0.348707 1:+96444342 None:intergenic
TGGTGGCAAGTGTGACATTA+AGG 0.349319 1:+96444973 None:intergenic
ACCAGAAATTCATGTCCTAT+TGG 0.362491 1:-96445063 MsG0180005811.01.T01:CDS
TAACTGAAGATGGTGGCTTT+TGG 0.369876 1:+96444247 None:intergenic
CTATCTGTCTGTAAGTTATA+AGG 0.376306 1:-96445246 MsG0180005811.01.T01:five_prime_UTR
AAGACATGAAGAAACTGAAA+TGG 0.388659 1:-96444446 MsG0180005811.01.T01:CDS
ACCTCCAACAATTTCTTCAA+TGG 0.392071 1:+96443810 None:intergenic
ATCAGGGGATTTAAGGCCTT+GGG 0.394811 1:+96444833 None:intergenic
ATGAGATTTGTGAGACTAAT+GGG 0.397989 1:+96444780 None:intergenic
TATGGGGATTCGGTTGAAAC+AGG 0.399818 1:-96443872 MsG0180005811.01.T01:CDS
ATTTCAGTTTCTTCATGTCT+TGG 0.400551 1:+96444448 None:intergenic
GTGTCCACAAACTAAGGTTT+TGG 0.404149 1:-96444037 MsG0180005811.01.T01:CDS
AAGTGTGACATTAAGGCCTT+TGG 0.409212 1:+96444980 None:intergenic
CATCAGGGGATTTAAGGCCT+TGG 0.411880 1:+96444832 None:intergenic
ATTAAGGCCTTTGGTTAAAA+GGG 0.414486 1:+96444989 None:intergenic
GTGATGAAGAGTAAGGATAT+TGG 0.420945 1:-96444129 MsG0180005811.01.T01:CDS
ATGAGTTCCATGTATTCATC+AGG 0.421010 1:+96444816 None:intergenic
ATTTGCCTAGTCTAAGTAAA+GGG 0.429558 1:+96445012 None:intergenic
GCGAGGGAGGCGGTGGCTGA+TGG 0.437864 1:-96443739 MsG0180005811.01.T01:CDS
GTTAAGAAACACGCTATTGC+AGG 0.441026 1:+96444009 None:intergenic
TACATGGTGTCCACAAACTA+AGG 0.443360 1:-96444043 MsG0180005811.01.T01:CDS
ACATGCGGCGAGGGAGGCGG+TGG 0.445235 1:-96443746 MsG0180005811.01.T01:CDS
AACGATAGTATATGGAGTAA+AGG 0.445421 1:+96444625 None:intergenic
TTTGCTACCCAAGGAACAAA+AGG 0.448391 1:+96444702 None:intergenic
GTTTGAATTATGAAGAATGA+AGG 0.449315 1:+96445129 None:intergenic
ACGATAGTATATGGAGTAAA+GGG 0.453056 1:+96444626 None:intergenic
GTTGTAGAAACGATAGTATA+TGG 0.453669 1:+96444617 None:intergenic
GATGAGATTTGTGAGACTAA+TGG 0.455139 1:+96444779 None:intergenic
TTAGTTCCACCTTCATTACT+AGG 0.457678 1:-96444339 MsG0180005811.01.T01:CDS
TCAGTTATATATATTTCATT+CGG 0.457992 1:-96444231 MsG0180005811.01.T01:CDS
GAGCTGAAAATGCAACCAAT+AGG 0.460632 1:+96445048 None:intergenic
ATGGAACTCATAGCCAAATT+CGG 0.461232 1:-96444804 MsG0180005811.01.T01:CDS
TGATCTTGACCTAGTAATGA+AGG 0.463203 1:+96444330 None:intergenic
AGAGCCATTGAAGAAATTGT+TGG 0.473416 1:-96443814 MsG0180005811.01.T01:CDS
TTAGAAGAAACAAAAGAGAA+AGG 0.474379 1:-96444075 MsG0180005811.01.T01:CDS
CATTGTGGATAACCAATCAT+AGG 0.478572 1:+96443940 None:intergenic
GGTGGAACTAATGGGCCTAC+AGG 0.479863 1:+96444351 None:intergenic
TGGTTTCAGCAATGGAAGAC+CGG 0.481559 1:+96444542 None:intergenic
ATGGGCCTACAGGTGTAATT+GGG 0.485212 1:+96444361 None:intergenic
GAAATATATATAACTGAAGA+TGG 0.487490 1:+96444237 None:intergenic
AAGAAATTGTTGGAGGTGAA+AGG 0.488865 1:-96443804 MsG0180005811.01.T01:CDS
CACAAGATTCTTGCATGGAA+TGG 0.490164 1:-96444275 MsG0180005811.01.T01:CDS
TTTGATGGAAGAATAAAAGA+TGG 0.494976 1:+96444510 None:intergenic
AAAAGATGTCATTGATTCAA+TGG 0.497573 1:-96444394 MsG0180005811.01.T01:CDS
CGGTTGAAACAGGACAATGA+TGG 0.499891 1:-96443862 MsG0180005811.01.T01:CDS
AGAAAGGATTGGTTGTTACA+TGG 0.502350 1:-96444059 MsG0180005811.01.T01:CDS
AGGGAGGCGGTGGCTGATGG+TGG 0.507840 1:-96443736 MsG0180005811.01.T01:CDS
GAAACATGCGGCGAGGGAGG+CGG 0.508586 1:-96443749 MsG0180005811.01.T01:CDS
GTAGTATAAACTAGGATAGG+AGG 0.509858 1:+96445211 None:intergenic
AAACAGGACGTTGATTCCAT+TGG 0.517626 1:+96444878 None:intergenic
AGGTCTTGTGGTTTCAGCAA+TGG 0.518610 1:+96444534 None:intergenic
CGTAATCACATACGAATCAC+TGG 0.525339 1:-96445276 MsG0180005811.01.T01:five_prime_UTR
TTTGAATTATGAAGAATGAA+GGG 0.526546 1:+96445130 None:intergenic
GTTTCTTAACACACTGTGGA+TGG 0.529174 1:-96443996 MsG0180005811.01.T01:CDS
AGACATGAAGAAACTGAAAT+GGG 0.530587 1:-96444445 MsG0180005811.01.T01:CDS
ATAAAAGATGGAAGGTCTTG+TGG 0.531512 1:+96444522 None:intergenic
AGAAACAAAAGAGAAAGGAT+TGG 0.532118 1:-96444070 MsG0180005811.01.T01:CDS
GTAATGAAGGTGGAACTAAT+GGG 0.535852 1:+96444343 None:intergenic
GGTTGAAACAGGACAATGAT+GGG 0.536148 1:-96443861 MsG0180005811.01.T01:CDS
ACTGCAGGAGTACCTATGAT+TGG 0.539262 1:-96443952 MsG0180005811.01.T01:CDS
GATTTGCCTAGTCTAAGTAA+AGG 0.540884 1:+96445011 None:intergenic
AATGTAGTATAAACTAGGAT+AGG 0.541522 1:+96445208 None:intergenic
TAAATCCCCTGATGAATACA+TGG 0.543699 1:-96444823 MsG0180005811.01.T01:CDS
GGAGCTGAAACATGCGGCGA+GGG 0.548892 1:-96443755 MsG0180005811.01.T01:CDS
GTGTCTTCTGAAGACATGGT+TGG 0.549487 1:+96445095 None:intergenic
TCTCTGGGTGATGAAGAGTA+AGG 0.551074 1:-96444136 MsG0180005811.01.T01:CDS
CCCACTTCTTACTCTACCAA+TGG 0.551509 1:-96444894 MsG0180005811.01.T01:CDS
TAGTATAAACTAGGATAGGA+GGG 0.551962 1:+96445212 None:intergenic
GAACATTTCAGCTAAAACAT+CGG 0.554683 1:+96444470 None:intergenic
GCCATTGAAGAAATTGTTGG+AGG 0.554838 1:-96443811 MsG0180005811.01.T01:CDS
TGAACCAAAACCTTAGTTTG+TGG 0.556902 1:+96444033 None:intergenic
GCTGAAACATGCGGCGAGGG+AGG 0.560744 1:-96443752 MsG0180005811.01.T01:CDS
TTGCTACCCAAGGAACAAAA+GGG 0.560980 1:+96444703 None:intergenic
TATATAATGTAGTATAAACT+AGG 0.570163 1:+96445203 None:intergenic
ACATTGGAAGCTGTAACTGC+AGG 0.571139 1:-96443967 MsG0180005811.01.T01:CDS
CCATTGGTAGAGTAAGAAGT+GGG 0.575004 1:+96444894 None:intergenic
GGGGACGGTGTCTGTGTCTG+TGG 0.576171 1:+96444914 None:intergenic
TTCAGCTAAAACATCGGACA+TGG 0.577833 1:+96444476 None:intergenic
TGTTCCTTGGGTAGCAAACG+TGG 0.583754 1:-96444697 MsG0180005811.01.T01:CDS
ATGGAAGAATAAAAGATGGA+AGG 0.584353 1:+96444514 None:intergenic
GACGGTGTCTGTGTCTGTGG+TGG 0.586453 1:+96444917 None:intergenic
TATATGGAGTAAAGGGTACA+AGG 0.589998 1:+96444633 None:intergenic
GGTTTCAGCAATGGAAGACC+GGG 0.596842 1:+96444543 None:intergenic
CGTATGTGATTACGTAGGCA+AGG 0.601959 1:+96445285 None:intergenic
GTAATTCCACGTCGATTTCG+GGG 0.603436 1:+96444565 None:intergenic
TTGGGATATGTCGAAGCCGT+CGG 0.609015 1:+96444851 None:intergenic
TGAGTTCCATGTATTCATCA+GGG 0.611788 1:+96444817 None:intergenic
CTGATGGTGGCTCTTCTGAG+AGG 0.612329 1:-96443723 MsG0180005811.01.T01:CDS
GAAATCGACGTGGAATTACC+CGG 0.614583 1:-96444561 MsG0180005811.01.T01:CDS
TAAGCCACGTTTGCTACCCA+AGG 0.618408 1:+96444693 None:intergenic
TCCATTGGTAGAGTAAGAAG+TGG 0.625007 1:+96444893 None:intergenic
CTATGATTGGTTATCCACAA+TGG 0.629343 1:-96443939 MsG0180005811.01.T01:CDS
GAGTTCCATGTATTCATCAG+GGG 0.630496 1:+96444818 None:intergenic
GTTGGTTGATCAGTCCATTG+TGG 0.632886 1:+96443925 None:intergenic
CTGTGGATGGAATTCTACAT+TGG 0.633378 1:-96443983 MsG0180005811.01.T01:CDS
CATTCCATGCAAGAATCTTG+TGG 0.635345 1:+96444276 None:intergenic
ATAAACCCTTTACTTAGACT+AGG 0.638559 1:-96445017 MsG0180005811.01.T01:CDS
GACGCCACAAGATTCTTGCA+TGG 0.640093 1:-96444280 MsG0180005811.01.T01:CDS
ATATATATAACTGAAGATGG+TGG 0.642086 1:+96444240 None:intergenic
GACGGCTTCGACATATCCCA+AGG 0.643166 1:-96444849 MsG0180005811.01.T01:CDS
TGGTGGTTGATTTGAAGACA+CGG 0.645486 1:+96444934 None:intergenic
TGGAGCTGAAACATGCGGCG+AGG 0.651171 1:-96443756 MsG0180005811.01.T01:CDS
TCTTGACCTAGTAATGAAGG+TGG 0.666199 1:+96444333 None:intergenic
TGAATCCAAAGACAAGCACA+TGG 0.666711 1:+96444657 None:intergenic
AAGACGTTGGAATTGAAATG+TGG 0.668188 1:-96444302 MsG0180005811.01.T01:CDS
TGCGTTGGAGCTGAAACATG+CGG 0.670482 1:-96443761 MsG0180005811.01.T01:CDS
GGTAGAGTAAGAAGTGGGGA+CGG 0.671471 1:+96444899 None:intergenic
GCGTGTTTCTTAACACACTG+TGG 0.672897 1:-96444000 MsG0180005811.01.T01:CDS
AGAAAACCCCGAAATCGACG+TGG 0.674952 1:-96444571 MsG0180005811.01.T01:CDS
GTGGTAAACTAATTCAGTGG+TGG 0.675799 1:+96444956 None:intergenic
GAATCCAAAGACAAGCACAT+GGG 0.703367 1:+96444658 None:intergenic
ACGGTGGTAAACTAATTCAG+TGG 0.706027 1:+96444953 None:intergenic
CATTGGTAGAGTAAGAAGTG+GGG 0.739463 1:+96444895 None:intergenic
AACTTACAGACAGATAGACA+CGG 0.741270 1:+96445252 None:intergenic
TGATTCGTATGTGATTACGT+AGG 0.757899 1:+96445280 None:intergenic
TGGTTGATTTGAAGACACGG+TGG 0.837597 1:+96444937 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAATGTAGTATAAACT+AGG + Chr1:96443769-96443788 None:intergenic 15.0%
!! TCAGTTATATATATTTCATT+CGG - Chr1:96444738-96444757 MsG0180005811.01.T01:CDS 15.0%
!! GAAATATATATAACTGAAGA+TGG + Chr1:96444735-96444754 None:intergenic 20.0%
!! TTTGAATTATGAAGAATGAA+GGG + Chr1:96443842-96443861 None:intergenic 20.0%
! AATGTAGTATAAACTAGGAT+AGG + Chr1:96443764-96443783 None:intergenic 25.0%
! ATATATATAACTGAAGATGG+TGG + Chr1:96444732-96444751 None:intergenic 25.0%
! GTTTGAATTATGAAGAATGA+AGG + Chr1:96443843-96443862 None:intergenic 25.0%
! TTAGAAGAAACAAAAGAGAA+AGG - Chr1:96444894-96444913 MsG0180005811.01.T01:CDS 25.0%
! TTTGATGGAAGAATAAAAGA+TGG + Chr1:96444462-96444481 None:intergenic 25.0%
!! ACAGTAACAAATATTTTCTC+TGG - Chr1:96444817-96444836 MsG0180005811.01.T01:CDS 25.0%
!! ATGGTTTTTATAGGATTTGA+TGG + Chr1:96444477-96444496 None:intergenic 25.0%
!! CAGTAACAAATATTTTCTCT+GGG - Chr1:96444818-96444837 MsG0180005811.01.T01:CDS 25.0%
!!! AAAAGATGTCATTGATTCAA+TGG - Chr1:96444575-96444594 MsG0180005811.01.T01:CDS 25.0%
!!! GATAATGCAAGCTAATTTTT+TGG + Chr1:96444241-96444260 None:intergenic 25.0%
AACGATAGTATATGGAGTAA+AGG + Chr1:96444347-96444366 None:intergenic 30.0%
AAGACATGAAGAAACTGAAA+TGG - Chr1:96444523-96444542 MsG0180005811.01.T01:CDS 30.0%
ACGATAGTATATGGAGTAAA+GGG + Chr1:96444346-96444365 None:intergenic 30.0%
AGAAACAAAAGAGAAAGGAT+TGG - Chr1:96444899-96444918 MsG0180005811.01.T01:CDS 30.0%
AGACATGAAGAAACTGAAAT+GGG - Chr1:96444524-96444543 MsG0180005811.01.T01:CDS 30.0%
AGCAAATTCTTTCTACGAAT+TGG - Chr1:96444551-96444570 MsG0180005811.01.T01:CDS 30.0%
AGTGTTTAAGAAAAATGCGT+TGG - Chr1:96445193-96445212 MsG0180005811.01.T01:five_prime_UTR 30.0%
ATAAACCCTTTACTTAGACT+AGG - Chr1:96443952-96443971 MsG0180005811.01.T01:CDS 30.0%
ATGAGATTTGTGAGACTAAT+GGG + Chr1:96444192-96444211 None:intergenic 30.0%
ATGGAAGAATAAAAGATGGA+AGG + Chr1:96444458-96444477 None:intergenic 30.0%
ATTAAGGCCTTTGGTTAAAA+GGG + Chr1:96443983-96444002 None:intergenic 30.0%
ATTTCAGTTTCTTCATGTCT+TGG + Chr1:96444524-96444543 None:intergenic 30.0%
ATTTGCCTAGTCTAAGTAAA+GGG + Chr1:96443960-96443979 None:intergenic 30.0%
CTATCTGTCTGTAAGTTATA+AGG - Chr1:96443723-96443742 MsG0180005811.01.T01:CDS 30.0%
GAACATTTCAGCTAAAACAT+CGG + Chr1:96444502-96444521 None:intergenic 30.0%
GTTGTAGAAACGATAGTATA+TGG + Chr1:96444355-96444374 None:intergenic 30.0%
TAGTATAAACTAGGATAGGA+GGG + Chr1:96443760-96443779 None:intergenic 30.0%
! GTTTCTGATGTTTTTCGTAT+GGG - Chr1:96445080-96445099 MsG0180005811.01.T01:CDS 30.0%
! TTTCTGATGTTTTTCGTATG+GGG - Chr1:96445081-96445100 MsG0180005811.01.T01:CDS 30.0%
!! GCTTAATGATTGATTTTGTG+TGG + Chr1:96443804-96443823 None:intergenic 30.0%
!! TGTTTCTGATGTTTTTCGTA+TGG - Chr1:96445079-96445098 MsG0180005811.01.T01:CDS 30.0%
!!! ATGCAAGCTAATTTTTTGGA+AGG + Chr1:96444237-96444256 None:intergenic 30.0%
!!! TGCAAGCTAATTTTTTGGAA+GGG + Chr1:96444236-96444255 None:intergenic 30.0%
AACTTACAGACAGATAGACA+CGG + Chr1:96443720-96443739 None:intergenic 35.0%
AAGAAATTGTTGGAGGTGAA+AGG - Chr1:96445165-96445184 MsG0180005811.01.T01:five_prime_UTR 35.0%
AAGAATGAAGGGAGTGAATT+TGG + Chr1:96443831-96443850 None:intergenic 35.0%
AAGACGTTGGAATTGAAATG+TGG - Chr1:96444667-96444686 MsG0180005811.01.T01:CDS 35.0%
ACCAATAGGACATGAATTTC+TGG + Chr1:96443910-96443929 None:intergenic 35.0%
ACCAGAAATTCATGTCCTAT+TGG - Chr1:96443906-96443925 MsG0180005811.01.T01:CDS 35.0%
ACCTCCAACAATTTCTTCAA+TGG + Chr1:96445162-96445181 None:intergenic 35.0%
AGAGCCATTGAAGAAATTGT+TGG - Chr1:96445155-96445174 MsG0180005811.01.T01:five_prime_UTR 35.0%
AGTAATGAAGGTGGAACTAA+TGG + Chr1:96444630-96444649 None:intergenic 35.0%
ATAAAAGATGGAAGGTCTTG+TGG + Chr1:96444450-96444469 None:intergenic 35.0%
ATGAGTTCCATGTATTCATC+AGG + Chr1:96444156-96444175 None:intergenic 35.0%
ATGGAACTCATAGCCAAATT+CGG - Chr1:96444165-96444184 MsG0180005811.01.T01:CDS 35.0%
CAAGATCAAAAACAAGACGT+TGG - Chr1:96444654-96444673 MsG0180005811.01.T01:CDS 35.0%
CATTAAGGCCTTTGGTTAAA+AGG + Chr1:96443984-96444003 None:intergenic 35.0%
CATTGTGGATAACCAATCAT+AGG + Chr1:96445032-96445051 None:intergenic 35.0%
GATGAGATTTGTGAGACTAA+TGG + Chr1:96444193-96444212 None:intergenic 35.0%
GATTTGCCTAGTCTAAGTAA+AGG + Chr1:96443961-96443980 None:intergenic 35.0%
GTAATGAAGGTGGAACTAAT+GGG + Chr1:96444629-96444648 None:intergenic 35.0%
GTAGTATAAACTAGGATAGG+AGG + Chr1:96443761-96443780 None:intergenic 35.0%
GTGATGAAGAGTAAGGATAT+TGG - Chr1:96444840-96444859 MsG0180005811.01.T01:CDS 35.0%
TAAATCCCCTGATGAATACA+TGG - Chr1:96444146-96444165 MsG0180005811.01.T01:CDS 35.0%
TGAGTTCCATGTATTCATCA+GGG + Chr1:96444155-96444174 None:intergenic 35.0%
TGATCTTGACCTAGTAATGA+AGG + Chr1:96444642-96444661 None:intergenic 35.0%
TGATTCGTATGTGATTACGT+AGG + Chr1:96443692-96443711 None:intergenic 35.0%
TGTATTCATCAGGGGATTTA+AGG + Chr1:96444146-96444165 None:intergenic 35.0%
TTAGTTCCACCTTCATTACT+AGG - Chr1:96444630-96444649 MsG0180005811.01.T01:CDS 35.0%
! ACATCGGACATGGTTTTTAT+AGG + Chr1:96444486-96444505 None:intergenic 35.0%
! ATGTTTTTCGTATGGGGATT+CGG - Chr1:96445087-96445106 MsG0180005811.01.T01:CDS 35.0%
! ATTTTCCCAATTACACCTGT+AGG - Chr1:96444603-96444622 MsG0180005811.01.T01:CDS 35.0%
! CAATAACCCTTTTGTTCCTT+GGG - Chr1:96444260-96444279 MsG0180005811.01.T01:CDS 35.0%
! CTATGATTGGTTATCCACAA+TGG - Chr1:96445030-96445049 MsG0180005811.01.T01:CDS 35.0%
! GAAACAAGCATTGCATTTGT+TGG + Chr1:96445065-96445084 None:intergenic 35.0%
! TATATGGAGTAAAGGGTACA+AGG + Chr1:96444339-96444358 None:intergenic 35.0%
! TCAATAACCCTTTTGTTCCT+TGG - Chr1:96444259-96444278 MsG0180005811.01.T01:CDS 35.0%
! TGAACCAAAACCTTAGTTTG+TGG + Chr1:96444939-96444958 None:intergenic 35.0%
!! AGAAAGGATTGGTTGTTACA+TGG - Chr1:96444910-96444929 MsG0180005811.01.T01:CDS 35.0%
!! TTTTGTGTCTTCTGAAGACA+TGG + Chr1:96443881-96443900 None:intergenic 35.0%
AAGTGTGACATTAAGGCCTT+TGG + Chr1:96443992-96444011 None:intergenic 40.0%
ACGGTGGTAAACTAATTCAG+TGG + Chr1:96444019-96444038 None:intergenic 40.0%
ATATCCCATGTGCTTGTCTT+TGG - Chr1:96444307-96444326 MsG0180005811.01.T01:CDS 40.0%
CACAAGATTCTTGCATGGAA+TGG - Chr1:96444694-96444713 MsG0180005811.01.T01:CDS 40.0%
CATTCCATGCAAGAATCTTG+TGG + Chr1:96444696-96444715 None:intergenic 40.0%
CATTGGTAGAGTAAGAAGTG+GGG + Chr1:96444077-96444096 None:intergenic 40.0%
CCATTGGTAGAGTAAGAAGT+GGG + Chr1:96444078-96444097 None:intergenic 40.0%
CGTAATCACATACGAATCAC+TGG - Chr1:96443693-96443712 MsG0180005811.01.T01:CDS 40.0%
CTGTGGATGGAATTCTACAT+TGG - Chr1:96444986-96445005 MsG0180005811.01.T01:CDS 40.0%
GAATCCAAAGACAAGCACAT+GGG + Chr1:96444314-96444333 None:intergenic 40.0%
GAGCTGAAAATGCAACCAAT+AGG + Chr1:96443924-96443943 None:intergenic 40.0%
GAGTTCCATGTATTCATCAG+GGG + Chr1:96444154-96444173 None:intergenic 40.0%
GCCATTGAAGAAATTGTTGG+AGG - Chr1:96445158-96445177 MsG0180005811.01.T01:five_prime_UTR 40.0%
GGTTGAAACAGGACAATGAT+GGG - Chr1:96445108-96445127 MsG0180005811.01.T01:exon 40.0%
GTGGTAAACTAATTCAGTGG+TGG + Chr1:96444016-96444035 None:intergenic 40.0%
GTTAAGAAACACGCTATTGC+AGG + Chr1:96444963-96444982 None:intergenic 40.0%
GTTTCTTAACACACTGTGGA+TGG - Chr1:96444973-96444992 MsG0180005811.01.T01:CDS 40.0%
TACATGGTGTCCACAAACTA+AGG - Chr1:96444926-96444945 MsG0180005811.01.T01:CDS 40.0%
TCCATTGGTAGAGTAAGAAG+TGG + Chr1:96444079-96444098 None:intergenic 40.0%
TCTTGACCTAGTAATGAAGG+TGG + Chr1:96444639-96444658 None:intergenic 40.0%
TGAATCCAAAGACAAGCACA+TGG + Chr1:96444315-96444334 None:intergenic 40.0%
TTCAGCTAAAACATCGGACA+TGG + Chr1:96444496-96444515 None:intergenic 40.0%
TTGCTACCCAAGGAACAAAA+GGG + Chr1:96444269-96444288 None:intergenic 40.0%
TTTGCTACCCAAGGAACAAA+AGG + Chr1:96444270-96444289 None:intergenic 40.0%
! GGCAAATCCCTTTTAACCAA+AGG - Chr1:96443973-96443992 MsG0180005811.01.T01:CDS 40.0%
! GTGTCCACAAACTAAGGTTT+TGG - Chr1:96444932-96444951 MsG0180005811.01.T01:CDS 40.0%
! TACGTAGGCAAGGATGATTT+TGG + Chr1:96443677-96443696 None:intergenic 40.0%
! TTGGTTGCATTTTCAGCTCA+AGG - Chr1:96443925-96443944 MsG0180005811.01.T01:CDS 40.0%
!! AAACAGGACGTTGATTCCAT+TGG + Chr1:96444094-96444113 None:intergenic 40.0%
!! TAACTGAAGATGGTGGCTTT+TGG + Chr1:96444725-96444744 None:intergenic 40.0%
!! TGGTGGTTGATTTGAAGACA+CGG + Chr1:96444038-96444057 None:intergenic 40.0%
AATGGGCCTACAGGTGTAAT+TGG + Chr1:96444612-96444631 None:intergenic 45.0%
ACATTGGAAGCTGTAACTGC+AGG - Chr1:96445002-96445021 MsG0180005811.01.T01:CDS 45.0%
ATGGGCCTACAGGTGTAATT+GGG + Chr1:96444611-96444630 None:intergenic 45.0%
CCCACTTCTTACTCTACCAA+TGG - Chr1:96444075-96444094 MsG0180005811.01.T01:CDS 45.0%
CGGTTGAAACAGGACAATGA+TGG - Chr1:96445107-96445126 MsG0180005811.01.T01:exon 45.0%
CGTATGTGATTACGTAGGCA+AGG + Chr1:96443687-96443706 None:intergenic 45.0%
CTAGGATAGGAGGGAATCTT+TGG + Chr1:96443751-96443770 None:intergenic 45.0%
GAAATCGACGTGGAATTACC+CGG - Chr1:96444408-96444427 MsG0180005811.01.T01:CDS 45.0%
GAGACTAATGGGACCGAATT+TGG + Chr1:96444181-96444200 None:intergenic 45.0%
GCGTGTTTCTTAACACACTG+TGG - Chr1:96444969-96444988 MsG0180005811.01.T01:CDS 45.0%
GTTGGTTGATCAGTCCATTG+TGG + Chr1:96445047-96445066 None:intergenic 45.0%
TCTCTGGGTGATGAAGAGTA+AGG - Chr1:96444833-96444852 MsG0180005811.01.T01:CDS 45.0%
TGGTGGCAAGTGTGACATTA+AGG + Chr1:96443999-96444018 None:intergenic 45.0%
TGGTTTCAGCAATGGAAGAC+CGG + Chr1:96444430-96444449 None:intergenic 45.0%
! AGGTCTTGTGGTTTCAGCAA+TGG + Chr1:96444438-96444457 None:intergenic 45.0%
! ATCAGGGGATTTAAGGCCTT+GGG + Chr1:96444139-96444158 None:intergenic 45.0%
! GTGTCTTCTGAAGACATGGT+TGG + Chr1:96443877-96443896 None:intergenic 45.0%
! TATGGGGATTCGGTTGAAAC+AGG - Chr1:96445097-96445116 MsG0180005811.01.T01:exon 45.0%
!! AACGTCCTGTTTTTCTCCGA+CGG - Chr1:96444102-96444121 MsG0180005811.01.T01:CDS 45.0%
!! ACTGCAGGAGTACCTATGAT+TGG - Chr1:96445017-96445036 MsG0180005811.01.T01:CDS 45.0%
!! GGGTAATTCCACGTCGATTT+CGG + Chr1:96444409-96444428 None:intergenic 45.0%
!! GGTAATTCCACGTCGATTTC+GGG + Chr1:96444408-96444427 None:intergenic 45.0%
!! GTAATTCCACGTCGATTTCG+GGG + Chr1:96444407-96444426 None:intergenic 45.0%
!! GTCGATTTCGGGGTTTTCTA+GGG + Chr1:96444397-96444416 None:intergenic 45.0%
!! TGGTTGATTTGAAGACACGG+TGG + Chr1:96444035-96444054 None:intergenic 45.0%
!!! ATTTCGGGGTTTTCTAGGGT+TGG + Chr1:96444393-96444412 None:intergenic 45.0%
!!! GGTTTTCTAGGGTTGGAAAC+TGG + Chr1:96444386-96444405 None:intergenic 45.0%
AGAAAACCCCGAAATCGACG+TGG - Chr1:96444398-96444417 MsG0180005811.01.T01:CDS 50.0%
GACGCCACAAGATTCTTGCA+TGG - Chr1:96444689-96444708 MsG0180005811.01.T01:CDS 50.0%
GGTAGAGTAAGAAGTGGGGA+CGG + Chr1:96444073-96444092 None:intergenic 50.0%
GGTTTCAGCAATGGAAGACC+GGG + Chr1:96444429-96444448 None:intergenic 50.0%
TGCGTTGGAGCTGAAACATG+CGG - Chr1:96445208-96445227 MsG0180005811.01.T01:five_prime_UTR 50.0%
TGTTCCTTGGGTAGCAAACG+TGG - Chr1:96444272-96444291 MsG0180005811.01.T01:CDS 50.0%
TTGGGATATGTCGAAGCCGT+CGG + Chr1:96444121-96444140 None:intergenic 50.0%
! CATCAGGGGATTTAAGGCCT+TGG + Chr1:96444140-96444159 None:intergenic 50.0%
! TAAGCCACGTTTGCTACCCA+AGG + Chr1:96444279-96444298 None:intergenic 50.0%
!!! CGTCGATTTCGGGGTTTTCT+AGG + Chr1:96444398-96444417 None:intergenic 50.0%
CGAAGCCGTCGGAGAAAAAC+AGG + Chr1:96444110-96444129 None:intergenic 55.0%
GACGGCTTCGACATATCCCA+AGG - Chr1:96444120-96444139 MsG0180005811.01.T01:CDS 55.0%
! GGTGGAACTAATGGGCCTAC+AGG + Chr1:96444621-96444640 None:intergenic 55.0%
!! CTGATGGTGGCTCTTCTGAG+AGG - Chr1:96445246-96445265 MsG0180005811.01.T01:five_prime_UTR 55.0%
GACGGTGTCTGTGTCTGTGG+TGG + Chr1:96444055-96444074 None:intergenic 60.0%
GGAGCTGAAACATGCGGCGA+GGG - Chr1:96445214-96445233 MsG0180005811.01.T01:five_prime_UTR 60.0%
TGGAGCTGAAACATGCGGCG+AGG - Chr1:96445213-96445232 MsG0180005811.01.T01:five_prime_UTR 60.0%
GAAACATGCGGCGAGGGAGG+CGG - Chr1:96445220-96445239 MsG0180005811.01.T01:five_prime_UTR 65.0%
GCTGAAACATGCGGCGAGGG+AGG - Chr1:96445217-96445236 MsG0180005811.01.T01:five_prime_UTR 65.0%
GGGGACGGTGTCTGTGTCTG+TGG + Chr1:96444058-96444077 None:intergenic 65.0%
AGGGAGGCGGTGGCTGATGG+TGG - Chr1:96445233-96445252 MsG0180005811.01.T01:five_prime_UTR 70.0%
ACATGCGGCGAGGGAGGCGG+TGG - Chr1:96445223-96445242 MsG0180005811.01.T01:five_prime_UTR 75.0%
GCGAGGGAGGCGGTGGCTGA+TGG - Chr1:96445230-96445249 MsG0180005811.01.T01:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 96443666 96445325 96443666 ID=MsG0180005811.01;Name=MsG0180005811.01
Chr1 mRNA 96443666 96445325 96443666 ID=MsG0180005811.01.T01;Parent=MsG0180005811.01;Name=MsG0180005811.01.T01;_AED=0.40;_eAED=0.40;_QI=214|-1|0|1|-1|1|1|0|481
Chr1 exon 96443666 96445325 96443666 ID=MsG0180005811.01.T01:exon:50543;Parent=MsG0180005811.01.T01
Chr1 five_prime_UTR 96445112 96445325 96445112 ID=MsG0180005811.01.T01:five_prime_utr;Parent=MsG0180005811.01.T01
Chr1 CDS 96443666 96445111 96443666 ID=MsG0180005811.01.T01:cds;Parent=MsG0180005811.01.T01
Gene Sequence

>MsG0180005811.01.T01

ATGTCTTCAGAAGACACAAAAATCAAACCAGAAATTCATGTCCTATTGGTTGCATTTTCAGCTCAAGGTCACATAAACCCTTTACTTAGACTAGGCAAATCCCTTTTAACCAAAGGCCTTAATGTCACACTTGCCACCACTGAATTAGTTTACCACCGTGTCTTCAAATCAACCACCACAGACACAGACACCGTCCCCACTTCTTACTCTACCAATGGAATCAACGTCCTGTTTTTCTCCGACGGCTTCGACATATCCCAAGGCCTTAAATCCCCTGATGAATACATGGAACTCATAGCCAAATTCGGTCCCATTAGTCTCACAAATCTCATCAAAAACAATTTCATCAACAACCCTTCCAAAAAATTAGCTTGCATTATCAATAACCCTTTTGTTCCTTGGGTAGCAAACGTGGCTTATGAATTCAATATCCCATGTGCTTGTCTTTGGATTCAACCTTGTACCCTTTACTCCATATACTATCGTTTCTACAACGAACTCAACCAGTTTCCAACCCTAGAAAACCCCGAAATCGACGTGGAATTACCCGGTCTTCCATTGCTGAAACCACAAGACCTTCCATCTTTTATTCTTCCATCAAATCCTATAAAAACCATGTCCGATGTTTTAGCTGAAATGTTCCAAGACATGAAGAAACTGAAATGGGTATTAGCAAATTCTTTCTACGAATTGGAAAAAGATGTCATTGATTCAATGGCTGAGATTTTCCCAATTACACCTGTAGGCCCATTAGTTCCACCTTCATTACTAGGTCAAGATCAAAAACAAGACGTTGGAATTGAAATGTGGACGCCACAAGATTCTTGCATGGAATGGCTTAACCAAAAGCCACCATCTTCAGTTATATATATTTCATTCGGAAGTCTCATCTTTTTATCAGAAAAACAAATGCAAAGCATAGCAAATGCATTGAAAAACAGTAACAAATATTTTCTCTGGGTGATGAAGAGTAAGGATATTGGAAATGAAAAAGTTCAGCTTTCTGAAAAATTCTTAGAAGAAACAAAAGAGAAAGGATTGGTTGTTACATGGTGTCCACAAACTAAGGTTTTGGTTCATCCTGCAATAGCGTGTTTCTTAACACACTGTGGATGGAATTCTACATTGGAAGCTGTAACTGCAGGAGTACCTATGATTGGTTATCCACAATGGACTGATCAACCAACAAATGCAATGCTTGTTTCTGATGTTTTTCGTATGGGGATTCGGTTGAAACAGGACAATGATGGGTTTGTTGAAAGTGATGAAGTTGAAAGAGCCATTGAAGAAATTGTTGGAGGTGAAAGGTCTGAAGTGTTTAAGAAAAATGCGTTGGAGCTGAAACATGCGGCGAGGGAGGCGGTGGCTGATGGTGGCTCTTCTGAGAGGAATATACAAAGATTCGTTGATGAAATTCTTGTCAGTGCAATTCATAGTAATAATTGA

Protein sequence

>MsG0180005811.01.T01

MSSEDTKIKPEIHVLLVAFSAQGHINPLLRLGKSLLTKGLNVTLATTELVYHRVFKSTTTDTDTVPTSYSTNGINVLFFSDGFDISQGLKSPDEYMELIAKFGPISLTNLIKNNFINNPSKKLACIINNPFVPWVANVAYEFNIPCACLWIQPCTLYSIYYRFYNELNQFPTLENPEIDVELPGLPLLKPQDLPSFILPSNPIKTMSDVLAEMFQDMKKLKWVLANSFYELEKDVIDSMAEIFPITPVGPLVPPSLLGQDQKQDVGIEMWTPQDSCMEWLNQKPPSSVIYISFGSLIFLSEKQMQSIANALKNSNKYFLWVMKSKDIGNEKVQLSEKFLEETKEKGLVVTWCPQTKVLVHPAIACFLTHCGWNSTLEAVTAGVPMIGYPQWTDQPTNAMLVSDVFRMGIRLKQDNDGFVESDEVERAIEEIVGGERSEVFKKNALELKHAAREAVADGGSSERNIQRFVDEILVSAIHSNN*