AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009578.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009578.01.T01 MTR_0167s0040 80.180 111 21 1 52 162 1 110 7.06e-37 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009578.01.T01 AT1G79200 72.222 72 20 0 133 204 87 158 2.04e-33 117

Find 44 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTGTTTGGTTTCAATTT+TGG 0.088882 2:-54566795 MsG0280009578.01.T01:CDS
CGCCTCGCACAGCCCATAAA+TGG 0.229703 2:-54562997 MsG0280009578.01.T01:CDS
TCTGCAAACCCTTTCATTCT+AGG 0.246141 2:+54568055 MsG0280009579.01.T01:CDS
ACCCTTATCATATTTATCTT+TGG 0.255453 2:+54566362 None:intergenic
CAGAGACGAGTGAAGGATTT+GGG 0.284020 2:-54568036 MsG0280009578.01.T01:CDS
AACAAAGGGTTTATAGAGAT+TGG 0.299376 2:+54562932 None:intergenic
GGTAGCAAACTCATTATTCT+TGG 0.322349 2:+54563153 None:intergenic
GCAGAGACGAGTGAAGGATT+TGG 0.326298 2:-54568037 MsG0280009578.01.T01:CDS
TTTGTCAAAGCTTGGAATAA+AGG 0.336053 2:-54563058 MsG0280009578.01.T01:CDS
ACCTTGAAGGCTTGAACCTC+AGG 0.390393 2:-54566835 MsG0280009578.01.T01:intron
CTGCAAACCCTTTCATTCTA+GGG 0.396577 2:+54568056 MsG0280009579.01.T01:CDS
TTCCAAAGATAAATATGATA+AGG 0.406737 2:-54566364 MsG0280009578.01.T01:CDS
AGGAAAAGAAGAGCAGAAAG+AGG 0.409042 2:-54566419 MsG0280009578.01.T01:CDS
GTTGTTAGTAACTGTTACAT+AGG 0.419631 2:+54562902 None:intergenic
GTGTTAGCAGAGCACTTGTT+TGG 0.432504 2:-54566807 MsG0280009578.01.T01:CDS
TTGCAGAATTTGTCAAAGCT+TGG 0.436101 2:-54563066 MsG0280009578.01.T01:CDS
AGAGGGAAAAGAAAGAGAAA+AGG 0.452527 2:-54566401 MsG0280009578.01.T01:CDS
TCGTGAAGAATGGAAGGAAA+TGG 0.456886 2:-54568088 None:intergenic
TCCAAAGATAAATATGATAA+GGG 0.457676 2:-54566363 MsG0280009578.01.T01:intron
ATTCTTCTCTTCTTTCAGCC+AGG 0.510461 2:+54563132 None:intergenic
ACATAGGAAATCTAAACAAA+GGG 0.515262 2:+54562918 None:intergenic
CTTGAATCGAATTACTATGA+AGG 0.515517 2:-54563031 MsG0280009578.01.T01:CDS
GGAAAAGAAAGAGAAAAGGA+AGG 0.519175 2:-54566397 MsG0280009578.01.T01:CDS
GGAAAAGAAGAGCAGAAAGA+GGG 0.525731 2:-54566418 MsG0280009578.01.T01:CDS
AGTAGGAACCCTAGAATGAA+AGG 0.529503 2:-54568064 MsG0280009578.01.T01:CDS
GAATGGAAGGAAATGGAAGT+AGG 0.544386 2:-54568081 MsG0280009578.01.T01:CDS
GGTAGGTCGTGAAGAATGGA+AGG 0.551426 2:-54568094 None:intergenic
AGAATAATGAGTTTGCTACC+TGG 0.553697 2:-54563150 MsG0280009578.01.T01:CDS
TTTGGGAATGTGGTGATCGG+TGG 0.563121 2:-54568019 MsG0280009578.01.T01:CDS
GGATTTGGGAATGTGGTGAT+CGG 0.571770 2:-54568022 MsG0280009578.01.T01:CDS
TACATAGGAAATCTAAACAA+AGG 0.572493 2:+54562917 None:intergenic
GTAGGAACCCTAGAATGAAA+GGG 0.583590 2:-54568063 MsG0280009578.01.T01:CDS
TTCCATTTATGGGCTGTGCG+AGG 0.589094 2:+54562995 None:intergenic
GGGTTTGCAGAGACGAGTGA+AGG 0.596048 2:-54568043 MsG0280009578.01.T01:CDS
CAGATGAGAAGAAAAGCAAG+AGG 0.597103 2:-54566467 MsG0280009578.01.T01:CDS
CTTGGCAAAATAGTCATCAC+CGG 0.597107 2:+54563171 None:intergenic
GTGGTGATCGGTGGAAAACA+AGG 0.598610 2:-54568010 MsG0280009578.01.T01:CDS
CCTTCAGATTCGGATTGCGA+AGG 0.611110 2:+54566732 None:intergenic
AACTGTAGATGATGATGATG+AGG 0.616853 2:-54566439 MsG0280009578.01.T01:CDS
CAGCAAAAGTGAAAGAAACA+TGG 0.625791 2:-54563897 MsG0280009578.01.T01:intron
CCTTCGCAATCCGAATCTGA+AGG 0.628237 2:-54566732 MsG0280009578.01.T01:intron
GAGTGAAGGATTTGGGAATG+TGG 0.645827 2:-54568029 MsG0280009578.01.T01:CDS
TCTGCTAACACAATCACCTG+AGG 0.723509 2:+54566819 None:intergenic
TGGTGATCGGTGGAAAACAA+GGG 0.748516 2:-54568009 MsG0280009578.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACCAAAAATATATA+TGG - Chr2:54564010-54564029 MsG0280009578.01.T01:intron 10.0%
!! AAAAAACCAAAAATATATAT+GGG - Chr2:54564011-54564030 MsG0280009578.01.T01:intron 10.0%
!! AAATATATTTCCAAAATTAA+TGG - Chr2:54565597-54565616 MsG0280009578.01.T01:intron 10.0%
!! AATATATTTCCAAAATTAAT+GGG - Chr2:54565598-54565617 MsG0280009578.01.T01:intron 10.0%
!! CAAATAAAATACAATTAAAA+TGG + Chr2:54563178-54563197 None:intergenic 10.0%
!! GAAATTAAAATTGAAAAAAA+TGG - Chr2:54563014-54563033 MsG0280009578.01.T01:CDS 10.0%
!!! TTGTTTGTAAATTTTTTAAA+AGG - Chr2:54563831-54563850 MsG0280009578.01.T01:intron 10.0%
!! AAATCCAAACATATTAAAAA+AGG - Chr2:54567574-54567593 MsG0280009578.01.T01:intron 15.0%
!! ATATGTTCTGATAAAAAAAA+AGG + Chr2:54566305-54566324 None:intergenic 15.0%
!! CAAAATAGTGAAATTAAATT+GGG - Chr2:54564353-54564372 MsG0280009578.01.T01:intron 15.0%
!! TAAACCTAAAAATGATTTAT+AGG + Chr2:54565503-54565522 None:intergenic 15.0%
!! TATGTTCTGATAAAAAAAAA+GGG + Chr2:54566304-54566323 None:intergenic 15.0%
!! TCAAAATAGTGAAATTAAAT+TGG - Chr2:54564352-54564371 MsG0280009578.01.T01:intron 15.0%
!! TGGAATAAAAGTAAATAATT+AGG - Chr2:54564271-54564290 MsG0280009578.01.T01:intron 15.0%
!!! AATACCTATAAATCATTTTT+AGG - Chr2:54565496-54565515 MsG0280009578.01.T01:intron 15.0%
!!! TAAGCTCATAATTTAATTTT+TGG - Chr2:54563710-54563729 MsG0280009578.01.T01:intron 15.0%
!! ACATCTAAAAACTTTGATAT+TGG - Chr2:54563900-54563919 MsG0280009578.01.T01:CDS 20.0%
!! AGTAGTTAGTAATGTTTAAT+TGG - Chr2:54564775-54564794 MsG0280009578.01.T01:intron 20.0%
!! ATACAATTAAAATGGATGTA+TGG + Chr2:54563170-54563189 None:intergenic 20.0%
!! ATTTCTGTAACAAAATCAAA+TGG - Chr2:54564672-54564691 MsG0280009578.01.T01:intron 20.0%
!! CATCTAAAAACTTTGATATT+GGG - Chr2:54563901-54563920 MsG0280009578.01.T01:CDS 20.0%
!! TATTCTAAACAAAAGAACAT+TGG - Chr2:54565109-54565128 MsG0280009578.01.T01:intron 20.0%
!! TCATAGAAATGAAGTTATAT+TGG - Chr2:54566842-54566861 MsG0280009578.01.T01:intron 20.0%
!! TCCAAAGATAAATATGATAA+GGG - Chr2:54564553-54564572 MsG0280009578.01.T01:intron 20.0%
!! TTCCAAAGATAAATATGATA+AGG - Chr2:54564552-54564571 MsG0280009578.01.T01:intron 20.0%
!!! AAAATGATTGCTTAATGTTT+TGG + Chr2:54565443-54565462 None:intergenic 20.0%
!!! ACTTTTTGATTTTCCATTTA+TGG + Chr2:54567935-54567954 MsG0280009579.01.T01:five_prime_UTR 20.0%
!!! AGATGAATTTTTTTTTTGTC+AGG + Chr2:54563400-54563419 None:intergenic 20.0%
!!! AGGGAAATTTTTATTAAGTA+AGG - Chr2:54567337-54567356 MsG0280009578.01.T01:intron 20.0%
!!! CATATCTTTATTTCAAATGT+AGG - Chr2:54567707-54567726 MsG0280009578.01.T01:intron 20.0%
!!! CTTTTTGATTTTCCATTTAT+GGG + Chr2:54567934-54567953 MsG0280009579.01.T01:five_prime_UTR 20.0%
!!! GCTGTTATATTTTCTTTTTA+CGG - Chr2:54567151-54567170 MsG0280009578.01.T01:intron 20.0%
!!! TGGATTTCATTTTTGTTAAT+GGG - Chr2:54564880-54564899 MsG0280009578.01.T01:intron 20.0%
!!! TGTTCCTTTTTTAATATGTT+TGG + Chr2:54567581-54567600 None:intergenic 20.0%
!!! TTGGATTTCATTTTTGTTAA+TGG - Chr2:54564879-54564898 MsG0280009578.01.T01:intron 20.0%
!!! TTTTAATATGTTTGGATTTG+CGG + Chr2:54567573-54567592 None:intergenic 20.0%
! AAAACCGATATGTAAAAAGA+AGG + Chr2:54566055-54566074 None:intergenic 25.0%
! AAAATATAACAGCACCAAAA+AGG + Chr2:54567144-54567163 None:intergenic 25.0%
! AACCAAAAATATATATGGGT+AGG - Chr2:54564015-54564034 MsG0280009578.01.T01:intron 25.0%
! ACATAGGAAATCTAAACAAA+GGG + Chr2:54568001-54568020 MsG0280009579.01.T01:CDS 25.0%
! ACATGCATTGTTAAATATAG+AGG - Chr2:54563299-54563318 MsG0280009578.01.T01:intron 25.0%
! ACCCTTATCATATTTATCTT+TGG + Chr2:54564557-54564576 None:intergenic 25.0%
! AGCATTATTAGTAGTAGTAT+TGG + Chr2:54567063-54567082 None:intergenic 25.0%
! ATACTGGGTATTATAGATTA+TGG - Chr2:54565798-54565817 MsG0280009578.01.T01:intron 25.0%
! ATAGAAGAATGAAGAAGAAA+TGG - Chr2:54562969-54562988 MsG0280009578.01.T01:exon 25.0%
! ATATATATGGGTAGGTAAAT+TGG - Chr2:54564023-54564042 MsG0280009578.01.T01:intron 25.0%
! ATTAAAATGGATGTATGGTT+TGG + Chr2:54563165-54563184 None:intergenic 25.0%
! ATTAAGTAAGGTGACATTAA+TGG - Chr2:54567349-54567368 MsG0280009578.01.T01:intron 25.0%
! GACTACTTCATATAAATAAC+AGG + Chr2:54567635-54567654 None:intergenic 25.0%
! GATACATGATTGTAAAACAA+AGG + Chr2:54564834-54564853 None:intergenic 25.0%
! GATATTCTACATTATAGAAC+TGG + Chr2:54565466-54565485 None:intergenic 25.0%
! GCATTATTAGTAGTAGTATT+GGG + Chr2:54567062-54567081 None:intergenic 25.0%
! GGATTCAAATCCAATATAAA+CGG - Chr2:54563852-54563871 MsG0280009578.01.T01:intron 25.0%
! TAAAAAATGGCAGAATGAAA+AGG + Chr2:54564243-54564262 None:intergenic 25.0%
! TAAATTTGATTCAGACTCTT+AGG - Chr2:54564605-54564624 MsG0280009578.01.T01:intron 25.0%
! TACATAGGAAATCTAAACAA+AGG + Chr2:54568002-54568021 MsG0280009579.01.T01:CDS 25.0%
! TACTGGGTATTATAGATTAT+GGG - Chr2:54565799-54565818 MsG0280009578.01.T01:intron 25.0%
! TACTGTCTTAAAAATTGAGT+TGG + Chr2:54566095-54566114 None:intergenic 25.0%
! TATAAACAAATTCAGCAGAA+AGG + Chr2:54567235-54567254 None:intergenic 25.0%
! TATGTTTGATTGGATATACT+GGG - Chr2:54565783-54565802 MsG0280009578.01.T01:intron 25.0%
! TCCTAATTATAAACACTTCT+CGG + Chr2:54566440-54566459 None:intergenic 25.0%
! TGGTTTAACATGTACAATAT+TGG - Chr2:54563601-54563620 MsG0280009578.01.T01:intron 25.0%
! TTACCAATTTACAAATGTCT+AGG + Chr2:54564985-54565004 None:intergenic 25.0%
! TTATGTTTGATTGGATATAC+TGG - Chr2:54565782-54565801 MsG0280009578.01.T01:intron 25.0%
! TTCCAATACACAGTAAAAAA+TGG + Chr2:54564256-54564275 None:intergenic 25.0%
! TTCTATAATGTAGAATATCC+AGG - Chr2:54565467-54565486 MsG0280009578.01.T01:intron 25.0%
!! ACAAAATCGATTTATAAGGT+GGG + Chr2:54566509-54566528 None:intergenic 25.0%
!! ACCTTATAAGTCAATTTTGT+AGG - Chr2:54566548-54566567 MsG0280009578.01.T01:intron 25.0%
!! ATACTTTGTCCCATTAATTT+TGG + Chr2:54565610-54565629 None:intergenic 25.0%
!! ATCAGAACATATCTAAGATA+AGG - Chr2:54566114-54566133 MsG0280009578.01.T01:intron 25.0%
!! GACATTTTATAATCATATGC+AGG - Chr2:54566875-54566894 MsG0280009578.01.T01:intron 25.0%
!! GTATCCTTCTTTTTACATAT+CGG - Chr2:54566048-54566067 MsG0280009578.01.T01:intron 25.0%
!! GTGATAAAAGATTTTTCTTC+TGG + Chr2:54567090-54567109 None:intergenic 25.0%
!! TACCTACCCATATATATTTT+TGG + Chr2:54564020-54564039 None:intergenic 25.0%
!! TCAGAACATATCTAAGATAA+GGG - Chr2:54566115-54566134 MsG0280009578.01.T01:intron 25.0%
!! TTATTTATCTAGTGGTTTGT+TGG - Chr2:54567675-54567694 MsG0280009578.01.T01:intron 25.0%
!! TTGTACAAATATACCACTTT+TGG - Chr2:54563577-54563596 MsG0280009578.01.T01:intron 25.0%
!!! AAAAAAAGTACCTTCAGATT+CGG + Chr2:54564197-54564216 None:intergenic 25.0%
!!! ACCTTATAAATCGATTTTGT+CGG - Chr2:54566509-54566528 MsG0280009578.01.T01:intron 25.0%
!!! AGACTTCTTTTGAAAAATTG+TGG - Chr2:54567311-54567330 MsG0280009578.01.T01:intron 25.0%
!!! TTTTGAAAAATTGTGGATGA+GGG - Chr2:54567318-54567337 MsG0280009578.01.T01:intron 25.0%
!!! TTTTTACATATCGGTTTTGT+AGG - Chr2:54566057-54566076 MsG0280009578.01.T01:intron 25.0%
AAAATGTATTTCAAAGCAGG+AGG - Chr2:54566026-54566045 MsG0280009578.01.T01:intron 30.0%
AACAAAGGGTTTATAGAGAT+TGG + Chr2:54567987-54568006 MsG0280009579.01.T01:CDS 30.0%
AAGTTGAATTTGCAGTGAAA+TGG + Chr2:54565666-54565685 None:intergenic 30.0%
AATACACCGATGATTCAAAA+GGG + Chr2:54565708-54565727 None:intergenic 30.0%
ATACGCATAAATAGATTGTC+TGG - Chr2:54564907-54564926 MsG0280009578.01.T01:intron 30.0%
ATAGCAATAAGCTACCAAAA+GGG - Chr2:54564744-54564763 MsG0280009578.01.T01:intron 30.0%
ATATCCCAATCTTAGAAGTT+TGG + Chr2:54566591-54566610 None:intergenic 30.0%
CAACCTAGACATTTGTAAAT+TGG - Chr2:54564979-54564998 MsG0280009578.01.T01:intron 30.0%
CAATTTACAAATGTCTAGGT+TGG + Chr2:54564981-54565000 None:intergenic 30.0%
CAGCAAGTTTAACAAAATCA+CGG - Chr2:54567470-54567489 MsG0280009578.01.T01:intron 30.0%
CATTGTTAAATATAGAGGTC+GGG - Chr2:54563304-54563323 MsG0280009578.01.T01:intron 30.0%
CTGAAAATGTATTTCAAAGC+AGG - Chr2:54566023-54566042 MsG0280009578.01.T01:intron 30.0%
CTTACTACCGTAATCAAATT+CGG - Chr2:54564051-54564070 MsG0280009578.01.T01:intron 30.0%
CTTGAATCGAATTACTATGA+AGG - Chr2:54567885-54567904 MsG0280009578.01.T01:intron 30.0%
GAAGAAGAAATGGTTATGAA+TGG - Chr2:54562979-54562998 MsG0280009578.01.T01:exon 30.0%
GATAATAGTCTGCTGTTATA+AGG - Chr2:54565859-54565878 MsG0280009578.01.T01:intron 30.0%
GCATTGTTAAATATAGAGGT+CGG - Chr2:54563303-54563322 MsG0280009578.01.T01:intron 30.0%
GTGATTGCTTTATGTTTGAT+TGG - Chr2:54565773-54565792 MsG0280009578.01.T01:intron 30.0%
GTTGTTAGTAACTGTTACAT+AGG + Chr2:54568017-54568036 MsG0280009579.01.T01:CDS 30.0%
TATAGCAATAAGCTACCAAA+AGG - Chr2:54564743-54564762 MsG0280009578.01.T01:intron 30.0%
TATCCCAATCTTAGAAGTTT+GGG + Chr2:54566590-54566609 None:intergenic 30.0%
TCACCTTGAAAAAGAGAAAA+TGG - Chr2:54563353-54563372 MsG0280009578.01.T01:intron 30.0%
TGAAGTTGTATGTGTTGTAA+GGG - Chr2:54566156-54566175 MsG0280009578.01.T01:intron 30.0%
TGTTGAGGTTATTTATCTAG+TGG - Chr2:54567667-54567686 MsG0280009578.01.T01:intron 30.0%
TTACTACCGTAATCAAATTC+GGG - Chr2:54564052-54564071 MsG0280009578.01.T01:intron 30.0%
TTCAAATCCAATATAAACGG+TGG - Chr2:54563855-54563874 MsG0280009578.01.T01:intron 30.0%
TTGAATGTAGAATTCATGTC+AGG - Chr2:54565308-54565327 MsG0280009578.01.T01:intron 30.0%
TTGGAGATTTAACAAAACCA+CGG + Chr2:54567501-54567520 None:intergenic 30.0%
TTTGTCAAAGCTTGGAATAA+AGG - Chr2:54567858-54567877 MsG0280009578.01.T01:intron 30.0%
! AAGCCTTATAAAGATTACGT+TGG - Chr2:54566779-54566798 MsG0280009578.01.T01:CDS 30.0%
! ACATAAGTCAGATTCTAAGA+TGG + Chr2:54566715-54566734 None:intergenic 30.0%
! ATGTCTATTGACTAGATCAT+TGG + Chr2:54565269-54565288 None:intergenic 30.0%
! ATTTGGTATCAGATCCTTTT+TGG - Chr2:54567127-54567146 MsG0280009578.01.T01:intron 30.0%
! ATTTTTACAAACCATCCTTG+AGG - Chr2:54567374-54567393 MsG0280009578.01.T01:intron 30.0%
! CAATTTTGTAGGCTTAAGTT+AGG - Chr2:54566559-54566578 MsG0280009578.01.T01:intron 30.0%
! GACAAAATCGATTTATAAGG+TGG + Chr2:54566510-54566529 None:intergenic 30.0%
! GCCTACAAAATTGACTTATA+AGG + Chr2:54566552-54566571 None:intergenic 30.0%
! GTTTTTCTCTGATCTGTTAT+CGG - Chr2:54567809-54567828 MsG0280009578.01.T01:intron 30.0%
! TATCACTATCTAGTTTGACA+TGG - Chr2:54565144-54565163 MsG0280009578.01.T01:intron 30.0%
! TTCAATTTTGGATCGATCAT+GGG - Chr2:54564133-54564152 MsG0280009578.01.T01:intron 30.0%
! TTTCAATTTTGGATCGATCA+TGG - Chr2:54564132-54564151 MsG0280009578.01.T01:intron 30.0%
! TTTTTACAAACCATCCTTGA+GGG - Chr2:54567375-54567394 MsG0280009578.01.T01:intron 30.0%
!! ACAAATATACCACTTTTGGT+TGG - Chr2:54563581-54563600 MsG0280009578.01.T01:intron 30.0%
!! ACCTTATAAGTCGATTTTGT+CGG - Chr2:54566470-54566489 MsG0280009578.01.T01:intron 30.0%
!! CACTTGTTTGGTTTCAATTT+TGG - Chr2:54564121-54564140 MsG0280009578.01.T01:intron 30.0%
!! CCTTATAAATCGATTTTGTC+GGG - Chr2:54566510-54566529 MsG0280009578.01.T01:intron 30.0%
!! CTTTTGAAAAATTGTGGATG+AGG - Chr2:54567317-54567336 MsG0280009578.01.T01:intron 30.0%
!! GAGAAGTGTTTATAATTAGG+AGG - Chr2:54566439-54566458 MsG0280009578.01.T01:CDS 30.0%
!! GTTGTTTCTATAAGCTATCT+TGG - Chr2:54564714-54564733 MsG0280009578.01.T01:intron 30.0%
!! TAGGATTTTCAAGAATTGTC+CGG - Chr2:54567726-54567745 MsG0280009578.01.T01:intron 30.0%
!! TAGTGGTTTGTTGGTATTTA+TGG - Chr2:54567684-54567703 MsG0280009578.01.T01:intron 30.0%
!! TAGTTTTTCTAGGAATCAAG+AGG - Chr2:54565203-54565222 MsG0280009578.01.T01:intron 30.0%
!! TCACCATTTTCTCTTTTTCA+AGG + Chr2:54563359-54563378 None:intergenic 30.0%
!! TCCGAGAAGTGTTTATAATT+AGG - Chr2:54566436-54566455 MsG0280009578.01.T01:CDS 30.0%
!! TTTTCAAACTGGTTTAGGTT+GGG - Chr2:54565038-54565057 MsG0280009578.01.T01:intron 30.0%
!!! AAGCAATGTTGTTTTCAAAC+TGG - Chr2:54565027-54565046 MsG0280009578.01.T01:intron 30.0%
!!! ATTTTTAGGTTTACTGCTTG+AGG - Chr2:54565510-54565529 MsG0280009578.01.T01:intron 30.0%
!!! CTGCTTTGAAATACATTTTC+AGG + Chr2:54566025-54566044 None:intergenic 30.0%
!!! TGCCATTTTTTACTGTGTAT+TGG - Chr2:54564251-54564270 MsG0280009578.01.T01:intron 30.0%
!!! TGTTGTTTTCAAACTGGTTT+AGG - Chr2:54565033-54565052 MsG0280009578.01.T01:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+AGG + Chr2:54563346-54563365 None:intergenic 30.0%
!!! TTTTTTGTCAGGTAGAATAG+TGG + Chr2:54563389-54563408 None:intergenic 30.0%
AAACCAATCATTTCACTCCA+TGG - Chr2:54565742-54565761 MsG0280009578.01.T01:intron 35.0%
AAAGTTAGCTCAATGAGTGA+AGG - Chr2:54566749-54566768 MsG0280009578.01.T01:CDS 35.0%
AGAGGGAAAAGAAAGAGAAA+AGG - Chr2:54564515-54564534 MsG0280009578.01.T01:intron 35.0%
AGCCTCTTGTGTAAAAAACT+GGG - Chr2:54566201-54566220 MsG0280009578.01.T01:intron 35.0%
ATGATTCAAAAGGGAAAGAC+AGG + Chr2:54565699-54565718 None:intergenic 35.0%
ATTTGCAAGACTACACACAT+AGG - Chr2:54565950-54565969 MsG0280009578.01.T01:intron 35.0%
CAATACACCGATGATTCAAA+AGG + Chr2:54565709-54565728 None:intergenic 35.0%
CAGCAAAAGTGAAAGAAACA+TGG - Chr2:54567019-54567038 MsG0280009578.01.T01:intron 35.0%
CATGTTAAACCAACCAAAAG+TGG + Chr2:54563593-54563612 None:intergenic 35.0%
CTGATACCAAATATTCAGCA+TGG + Chr2:54567119-54567138 None:intergenic 35.0%
CTTACAGTATACCAAATGGT+GGG - Chr2:54566232-54566251 MsG0280009578.01.T01:intron 35.0%
CTTGTGTAAAAAACTGGGTA+AGG - Chr2:54566206-54566225 MsG0280009578.01.T01:intron 35.0%
GAGCAAGGAAAAAACATGAA+AGG - Chr2:54565537-54565556 MsG0280009578.01.T01:intron 35.0%
GGAAAAGAAAGAGAAAAGGA+AGG - Chr2:54564519-54564538 MsG0280009578.01.T01:intron 35.0%
GGTAGCAAACTCATTATTCT+TGG + Chr2:54567766-54567785 None:intergenic 35.0%
GGTATTATAGATTATGGGTC+AGG - Chr2:54565804-54565823 MsG0280009578.01.T01:intron 35.0%
GTGAAGTTGTATGTGTTGTA+AGG - Chr2:54566155-54566174 MsG0280009578.01.T01:intron 35.0%
TACTACCGTAATCAAATTCG+GGG - Chr2:54564053-54564072 MsG0280009578.01.T01:intron 35.0%
TCACAAACCACCGTTTATAT+TGG + Chr2:54563865-54563884 None:intergenic 35.0%
TCTGTTATGCTACTCATGAT+CGG - Chr2:54566331-54566350 MsG0280009578.01.T01:intron 35.0%
TGATAAAAAAAAAGGGCAGC+CGG + Chr2:54566297-54566316 None:intergenic 35.0%
TGGCCAACGTAATCTTTATA+AGG + Chr2:54566785-54566804 None:intergenic 35.0%
TTCTTGCCATGCTGAATATT+TGG - Chr2:54567110-54567129 MsG0280009578.01.T01:intron 35.0%
TTGCAGAATTTGTCAAAGCT+TGG - Chr2:54567850-54567869 MsG0280009578.01.T01:intron 35.0%
TTGTTCCCCGAATTTGATTA+CGG + Chr2:54564061-54564080 None:intergenic 35.0%
TTTATAGGTATTTGCAAGCC+TGG + Chr2:54565488-54565507 None:intergenic 35.0%
! AACTGACAGTTCAAGAGTAT+AGG - Chr2:54567273-54567292 MsG0280009578.01.T01:intron 35.0%
! AACTGTAGATGATGATGATG+AGG - Chr2:54564477-54564496 MsG0280009578.01.T01:intron 35.0%
! AATGGGTAATAGTGTTGAGA+TGG - Chr2:54563032-54563051 MsG0280009578.01.T01:CDS 35.0%
! ACTATCTAGTTTGACATGGA+GGG - Chr2:54565148-54565167 MsG0280009578.01.T01:intron 35.0%
! ACTCATTGAGCTAACTTTTG+AGG + Chr2:54566747-54566766 None:intergenic 35.0%
! AGCAATCACTAATTTTGCCA+TGG + Chr2:54565762-54565781 None:intergenic 35.0%
! ATTAGTAGTAGTATTGGGAG+TGG + Chr2:54567057-54567076 None:intergenic 35.0%
! ATTTTCATCTTTTTCCGTCC+CGG - Chr2:54563254-54563273 MsG0280009578.01.T01:intron 35.0%
! CAAAAGAACATTGGTACTGA+AGG - Chr2:54565118-54565137 MsG0280009578.01.T01:intron 35.0%
! CCCGACAAAATCGATTTATA+AGG + Chr2:54566513-54566532 None:intergenic 35.0%
! CTCATTGAGCTAACTTTTGA+GGG + Chr2:54566746-54566765 None:intergenic 35.0%
! GTCTTTCCCTTTTGAATCAT+CGG - Chr2:54565699-54565718 MsG0280009578.01.T01:intron 35.0%
! TCTAGGACGTACTATGATAA+AGG - Chr2:54566637-54566656 MsG0280009578.01.T01:intron 35.0%
! TGGGACAAAGTATCTGTATA+AGG - Chr2:54565617-54565636 MsG0280009578.01.T01:intron 35.0%
! TGGGAGTTTGAACTTTTGTA+AGG - Chr2:54565174-54565193 MsG0280009578.01.T01:intron 35.0%
! TTAGTAGTAGTATTGGGAGT+GGG + Chr2:54567056-54567075 None:intergenic 35.0%
! TTTTACAAACCATCCTTGAG+GGG - Chr2:54567376-54567395 MsG0280009578.01.T01:intron 35.0%
! TTTTCGCAAAAGCTATGCTT+TGG + Chr2:54567520-54567539 None:intergenic 35.0%
!! AGAATAATGAGTTTGCTACC+TGG - Chr2:54567766-54567785 MsG0280009578.01.T01:intron 35.0%
!! CAACCCAAACTTCTAAGATT+GGG - Chr2:54566584-54566603 MsG0280009578.01.T01:intron 35.0%
!! CCTTATAAGTCGATTTTGTC+GGG - Chr2:54566471-54566490 MsG0280009578.01.T01:intron 35.0%
!! GTTTTCAAACTGGTTTAGGT+TGG - Chr2:54565037-54565056 MsG0280009578.01.T01:intron 35.0%
!! TCAACCCAAACTTCTAAGAT+TGG - Chr2:54566583-54566602 MsG0280009578.01.T01:intron 35.0%
!! TTTCAAACTGGTTTAGGTTG+GGG - Chr2:54565039-54565058 MsG0280009578.01.T01:intron 35.0%
!!! AAGGCTATGCTAGTTTTTCT+AGG - Chr2:54565193-54565212 MsG0280009578.01.T01:intron 35.0%
!!! TACCCAGTTTTTTACACAAG+AGG + Chr2:54566206-54566225 None:intergenic 35.0%
AAAGGCAACACTGGTAAAAC+AGG + Chr2:54567217-54567236 None:intergenic 40.0%
AATTTGCAGTGAAATGGCAC+AGG + Chr2:54565660-54565679 None:intergenic 40.0%
AGCTACACTGAAGGTAATCT+AGG - Chr2:54566620-54566639 MsG0280009578.01.T01:intron 40.0%
AGGAAAAGAAGAGCAGAAAG+AGG - Chr2:54564497-54564516 MsG0280009578.01.T01:intron 40.0%
AGGACGTACTATGATAAAGG+AGG - Chr2:54566640-54566659 MsG0280009578.01.T01:intron 40.0%
AGGAGTTAGTTAGAAGTCGT+TGG - Chr2:54564860-54564879 MsG0280009578.01.T01:intron 40.0%
AGTAGGAACCCTAGAATGAA+AGG - Chr2:54562852-54562871 MsG0280009578.01.T01:three_prime_UTR 40.0%
ATTCTCCAAATGTCCAGTCT+TGG - Chr2:54566361-54566380 MsG0280009578.01.T01:intron 40.0%
ATTCTTCTCTTCTTTCAGCC+AGG + Chr2:54567787-54567806 None:intergenic 40.0%
CAAAAGGGAAAGACAGGAAT+AGG + Chr2:54565693-54565712 None:intergenic 40.0%
CAGATGAGAAGAAAAGCAAG+AGG - Chr2:54564449-54564468 MsG0280009578.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+TGG - Chr2:54566200-54566219 MsG0280009578.01.T01:intron 40.0%
CGGACCATATCTCATTGAAT+GGG + Chr2:54566420-54566439 None:intergenic 40.0%
CGGTGAGTTTGATAGAATCA+AGG + Chr2:54567553-54567572 None:intergenic 40.0%
CTGCAAACCCTTTCATTCTA+GGG + Chr2:54562863-54562882 None:intergenic 40.0%
CTGCTGTTATAAGGTCTACT+TGG - Chr2:54565868-54565887 MsG0280009578.01.T01:intron 40.0%
CTGTTATGCTACTCATGATC+GGG - Chr2:54566332-54566351 MsG0280009578.01.T01:intron 40.0%
CTTGGCAAAATAGTCATCAC+CGG + Chr2:54567748-54567767 None:intergenic 40.0%
CTTTACATGTCCTATCCTAG+AGG + Chr2:54565924-54565943 None:intergenic 40.0%
GCTGCTTACAGTATACCAAA+TGG - Chr2:54566228-54566247 MsG0280009578.01.T01:intron 40.0%
GCTGTGATTCCAAACATACA+CGG + Chr2:54567454-54567473 None:intergenic 40.0%
GCTTACAGTATACCAAATGG+TGG - Chr2:54566231-54566250 MsG0280009578.01.T01:intron 40.0%
GGAAAAGAAGAGCAGAAAGA+GGG - Chr2:54564498-54564517 MsG0280009578.01.T01:intron 40.0%
GGACCATATCTCATTGAATG+GGG + Chr2:54566419-54566438 None:intergenic 40.0%
GTAGGAACCCTAGAATGAAA+GGG - Chr2:54562853-54562872 MsG0280009578.01.T01:three_prime_UTR 40.0%
GTCAGAAACTGTGATTGTTG+AGG - Chr2:54567652-54567671 MsG0280009578.01.T01:intron 40.0%
GTTCCCCATTCAATGAGATA+TGG - Chr2:54566413-54566432 MsG0280009578.01.T01:CDS 40.0%
TAACCCTAAAAGCAAGCTCA+AGG - Chr2:54565833-54565852 MsG0280009578.01.T01:intron 40.0%
TACAATCATGTATCAGCTGC+AGG - Chr2:54564840-54564859 MsG0280009578.01.T01:intron 40.0%
TCGGACCATATCTCATTGAA+TGG + Chr2:54566421-54566440 None:intergenic 40.0%
TCTAGGAATCAAGAGGATAC+TGG - Chr2:54565210-54565229 MsG0280009578.01.T01:intron 40.0%
TCTATGAGATGCTAGCTCAA+TGG + Chr2:54567415-54567434 None:intergenic 40.0%
TCTGCAAACCCTTTCATTCT+AGG + Chr2:54562864-54562883 None:intergenic 40.0%
TCTTACATTGACCAGTGATG+TGG + Chr2:54566805-54566824 None:intergenic 40.0%
TTGAAGACTCCGTGTATGTT+TGG - Chr2:54567442-54567461 MsG0280009578.01.T01:intron 40.0%
TTGCCATGGAGTGAAATGAT+TGG + Chr2:54565748-54565767 None:intergenic 40.0%
TTGTATGTGTTGTAAGGGCA+TGG - Chr2:54566161-54566180 MsG0280009578.01.T01:intron 40.0%
! AGCAGTAGCAGAACACATTT+TGG - Chr2:54562936-54562955 MsG0280009578.01.T01:three_prime_UTR 40.0%
! CACTATCTAGTTTGACATGG+AGG - Chr2:54565147-54565166 MsG0280009578.01.T01:intron 40.0%
! CCCGACAAAATCGACTTATA+AGG + Chr2:54566474-54566493 None:intergenic 40.0%
! CGATTTTGTCGGGTTAAGTT+AGG - Chr2:54566481-54566500 MsG0280009578.01.T01:intron 40.0%
! GGTAATAGTGTTGAGATGGT+GGG - Chr2:54563036-54563055 MsG0280009578.01.T01:CDS 40.0%
! TGTATGTGTTGTAAGGGCAT+GGG - Chr2:54566162-54566181 MsG0280009578.01.T01:intron 40.0%
!! ACTCCTTGAGCTTGCTTTTA+GGG + Chr2:54565839-54565858 None:intergenic 40.0%
!! CGGTTTTGTAGGATTGAGTT+AGG - Chr2:54566068-54566087 MsG0280009578.01.T01:intron 40.0%
!! GTAGCAGAACACATTTTGGT+TGG - Chr2:54562940-54562959 MsG0280009578.01.T01:three_prime_UTR 40.0%
AACGGAGATTGGAGAAGTGA+TGG - Chr2:54563071-54563090 MsG0280009578.01.T01:CDS 45.0%
AGATAGAGAGAATGCATGCG+TGG - Chr2:54563100-54563119 MsG0280009578.01.T01:CDS 45.0%
AGGAGGTTACGATTCCGATA+TGG - Chr2:54566657-54566676 MsG0280009578.01.T01:intron 45.0%
AGGTGTGGAGAGTCTCATAT+TGG - Chr2:54565988-54566007 MsG0280009578.01.T01:intron 45.0%
AGTTTGACATGGAGGGTCTT+GGG - Chr2:54565155-54565174 MsG0280009578.01.T01:intron 45.0%
ATTCAGCAGAAAGGCAACAC+TGG + Chr2:54567226-54567245 None:intergenic 45.0%
ATTCGGGGAACAAACCTTGA+AGG - Chr2:54564068-54564087 MsG0280009578.01.T01:intron 45.0%
CAGAGACGAGTGAAGGATTT+GGG - Chr2:54562880-54562899 MsG0280009578.01.T01:three_prime_UTR 45.0%
GAGAGGATGAAGGAAAAGAG+TGG + Chr2:54563140-54563159 None:intergenic 45.0%
GAGTGAAGGATTTGGGAATG+TGG - Chr2:54562887-54562906 MsG0280009578.01.T01:three_prime_UTR 45.0%
GCAACACTGGTAAAACAGGA+TGG + Chr2:54567213-54567232 None:intergenic 45.0%
GCTTCTAGTAGCTACACTGA+AGG - Chr2:54566611-54566630 MsG0280009578.01.T01:intron 45.0%
GGATTTGGGAATGTGGTGAT+CGG - Chr2:54562894-54562913 MsG0280009578.01.T01:three_prime_UTR 45.0%
GGTACCAATGTTTGCAGTCT+GGG + Chr2:54566694-54566713 None:intergenic 45.0%
GTCCTATCCTAGAGGTGAAA+TGG + Chr2:54565916-54565935 None:intergenic 45.0%
TAGTTTGACATGGAGGGTCT+TGG - Chr2:54565154-54565173 MsG0280009578.01.T01:intron 45.0%
TCTGCTAACACAATCACCTG+AGG + Chr2:54564100-54564119 None:intergenic 45.0%
TGAGATGCTAGCTCAATGGA+CGG + Chr2:54567411-54567430 None:intergenic 45.0%
TGGTACCAATGTTTGCAGTC+TGG + Chr2:54566695-54566714 None:intergenic 45.0%
TGGTGATCGGTGGAAAACAA+GGG - Chr2:54562907-54562926 MsG0280009578.01.T01:three_prime_UTR 45.0%
TGTCAGCTGAGCTATGTTTC+CGG + Chr2:54563276-54563295 None:intergenic 45.0%
! ACTACTGACACAAGCCCTTT+TGG + Chr2:54564761-54564780 None:intergenic 45.0%
! AGACTAACTGCAGGGGTTTT+GGG - Chr2:54565239-54565258 MsG0280009578.01.T01:intron 45.0%
! CAACATGCCATTTCACCTCT+AGG - Chr2:54565906-54565925 MsG0280009578.01.T01:intron 45.0%
! GAATCAAGAGGATACTGGCT+AGG - Chr2:54565215-54565234 MsG0280009578.01.T01:intron 45.0%
! GGATGTATGGTTTGGATGAG+AGG + Chr2:54563157-54563176 None:intergenic 45.0%
! GGGTAATAGTGTTGAGATGG+TGG - Chr2:54563035-54563054 MsG0280009578.01.T01:CDS 45.0%
! GTGAATAAGTGAGGTGTCTG+AGG + Chr2:54563337-54563356 None:intergenic 45.0%
! GTGTTAGCAGAGCACTTGTT+TGG - Chr2:54564109-54564128 MsG0280009578.01.T01:intron 45.0%
! TAGACTAACTGCAGGGGTTT+TGG - Chr2:54565238-54565257 MsG0280009578.01.T01:intron 45.0%
! TCTAAGATAAGGGAGAGCCT+TGG - Chr2:54566125-54566144 MsG0280009578.01.T01:intron 45.0%
! TGGTTTGGATGAGAGGATGA+AGG + Chr2:54563150-54563169 None:intergenic 45.0%
!! CACTCCTTGAGCTTGCTTTT+AGG + Chr2:54565840-54565859 None:intergenic 45.0%
!! GATTGGAGAAGTGATGGATG+AGG - Chr2:54563077-54563096 MsG0280009578.01.T01:CDS 45.0%
!! TGCCATTTCACCTCTAGGAT+AGG - Chr2:54565911-54565930 MsG0280009578.01.T01:intron 45.0%
!!! ACTGCTTGAGGTTTTGAGCA+AGG - Chr2:54565522-54565541 MsG0280009578.01.T01:intron 45.0%
!! AAATTAAAATTGAAAAAAAT+GGG - Chr2:54563015-54563034 MsG0280009578.01.T01:CDS 5.0%
!!! TGATTTTTTATTTTATTTTA+AGG + Chr2:54563222-54563241 None:intergenic 5.0%
AATGTCCAGTCTTGGACGTG+AGG - Chr2:54566369-54566388 MsG0280009578.01.T01:CDS 50.0%
ACAAAGCTCCCACATACGCA+GGG + Chr2:54566271-54566290 None:intergenic 50.0%
ACCTGAGGTTCAAGCCTTCA+AGG + Chr2:54564085-54564104 None:intergenic 50.0%
ACCTTGAAGGCTTGAACCTC+AGG - Chr2:54564081-54564100 MsG0280009578.01.T01:intron 50.0%
AGTTCGAATCCCCTCAAGGA+TGG + Chr2:54567388-54567407 None:intergenic 50.0%
CACGTCCAAGACTGGACATT+TGG + Chr2:54566369-54566388 None:intergenic 50.0%
CAGTGAAATGGCACAGGACA+AGG + Chr2:54565654-54565673 None:intergenic 50.0%
CCTTCAGATTCGGATTGCGA+AGG + Chr2:54564187-54564206 None:intergenic 50.0%
CCTTCGCAATCCGAATCTGA+AGG - Chr2:54564184-54564203 MsG0280009578.01.T01:intron 50.0%
GAAATGGCACAGGACAAGGA+TGG + Chr2:54565650-54565669 None:intergenic 50.0%
GAACTGTCAGTTGCAGCATG+TGG + Chr2:54567265-54567284 None:intergenic 50.0%
GATTACGTTGGCCACATCAC+TGG - Chr2:54566791-54566810 MsG0280009578.01.T01:CDS 50.0%
GCAGAGACGAGTGAAGGATT+TGG - Chr2:54562879-54562898 MsG0280009578.01.T01:three_prime_UTR 50.0%
GCATGCGTGGCATTTCTTGT+AGG - Chr2:54563113-54563132 MsG0280009578.01.T01:CDS 50.0%
GCTAGGTAGACTAACTGCAG+GGG - Chr2:54565232-54565251 MsG0280009578.01.T01:intron 50.0%
GGCTAGGTAGACTAACTGCA+GGG - Chr2:54565231-54565250 MsG0280009578.01.T01:intron 50.0%
GGGAGACTCTGCTTCCATAT+CGG + Chr2:54566674-54566693 None:intergenic 50.0%
GTCAGCTGAGCTATGTTTCC+GGG + Chr2:54563275-54563294 None:intergenic 50.0%
GTCTCCCAGACTGCAAACAT+TGG - Chr2:54566687-54566706 MsG0280009578.01.T01:intron 50.0%
GTGGTGATCGGTGGAAAACA+AGG - Chr2:54562906-54562925 MsG0280009578.01.T01:three_prime_UTR 50.0%
TACACACATAGGTTGCCCGA+CGG - Chr2:54565961-54565980 MsG0280009578.01.T01:intron 50.0%
TGGCTAGGTAGACTAACTGC+AGG - Chr2:54565230-54565249 MsG0280009578.01.T01:intron 50.0%
TTTGGGAATGTGGTGATCGG+TGG - Chr2:54562897-54562916 MsG0280009578.01.T01:three_prime_UTR 50.0%
! TATGTGGGAGCTTTGTGCAC+CGG - Chr2:54566275-54566294 MsG0280009578.01.T01:intron 50.0%
! TTCCATTTATGGGCTGTGCG+AGG + Chr2:54567924-54567943 MsG0280009579.01.T01:five_prime_UTR 50.0%
!! ACAAAATCACGGTGTCACCG+TGG - Chr2:54567481-54567500 MsG0280009578.01.T01:intron 50.0%
!! GTGTGTTCTGGAACGGAGAT+TGG - Chr2:54563060-54563079 MsG0280009578.01.T01:CDS 50.0%
ACAACTTCACCGTTGCGCCA+AGG + Chr2:54566145-54566164 None:intergenic 55.0%
ACATACGCAGGGTCTGGCAA+GGG + Chr2:54566260-54566279 None:intergenic 55.0%
ACCATCCTCACGTCCAAGAC+TGG + Chr2:54566377-54566396 None:intergenic 55.0%
ACGGAGTTCGAATCCCCTCA+AGG + Chr2:54567392-54567411 None:intergenic 55.0%
ATAGGTTGCCCGACGGATCT+AGG - Chr2:54565968-54565987 MsG0280009578.01.T01:intron 55.0%
CACAAAGCTCCCACATACGC+AGG + Chr2:54566272-54566291 None:intergenic 55.0%
CTCTCCACACCTAGATCCGT+CGG + Chr2:54565980-54565999 None:intergenic 55.0%
GCTGAGCTATGTTTCCGGGA+CGG + Chr2:54563271-54563290 None:intergenic 55.0%
GGGTTTGCAGAGACGAGTGA+AGG - Chr2:54562873-54562892 MsG0280009578.01.T01:three_prime_UTR 55.0%
TCCAGTCTTGGACGTGAGGA+TGG - Chr2:54566373-54566392 MsG0280009578.01.T01:CDS 55.0%
TCTCCACACCTAGATCCGTC+GGG + Chr2:54565979-54565998 None:intergenic 55.0%
TTGCCAGACCCTGCGTATGT+GGG - Chr2:54566260-54566279 MsG0280009578.01.T01:intron 55.0%
!! GAGATGGTGGGAGTGTGTTC+TGG - Chr2:54563048-54563067 MsG0280009578.01.T01:CDS 55.0%
!! GGTGGGAGTGTGTTCTGGAA+CGG - Chr2:54563053-54563072 MsG0280009578.01.T01:CDS 55.0%
AAGGGAGAGCCTTGGCGCAA+CGG - Chr2:54566133-54566152 MsG0280009578.01.T01:intron 60.0%
CACATACGCAGGGTCTGGCA+AGG + Chr2:54566261-54566280 None:intergenic 60.0%
CATACGCAGGGTCTGGCAAG+GGG + Chr2:54566259-54566278 None:intergenic 60.0%
CGCCTCGCACAGCCCATAAA+TGG - Chr2:54567919-54567938 MsG0280009578.01.T01:intron 60.0%
CTTGCCAGACCCTGCGTATG+TGG - Chr2:54566259-54566278 MsG0280009578.01.T01:intron 60.0%
TGGCAAGGGGTCCCACCATT+TGG + Chr2:54566246-54566265 None:intergenic 60.0%
TTGCCCGACGGATCTAGGTG+TGG - Chr2:54565973-54565992 MsG0280009578.01.T01:intron 60.0%
GCTCCCACATACGCAGGGTC+TGG + Chr2:54566266-54566285 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 54562837 54568101 54562837 ID=MsG0280009578.01;Name=MsG0280009578.01
Chr2 mRNA 54562837 54568101 54562837 ID=MsG0280009578.01.T01;Parent=MsG0280009578.01;Name=MsG0280009578.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.75|0.6|0.8|0.25|0.4|5|145|204
Chr2 exon 54568010 54568101 54568010 ID=MsG0280009578.01.T01:exon:18421;Parent=MsG0280009578.01.T01
Chr2 exon 54566733 54566848 54566733 ID=MsG0280009578.01.T01:exon:18422;Parent=MsG0280009578.01.T01
Chr2 exon 54566364 54566486 54566364 ID=MsG0280009578.01.T01:exon:18423;Parent=MsG0280009578.01.T01
Chr2 exon 54563898 54563953 54563898 ID=MsG0280009578.01.T01:exon:18424;Parent=MsG0280009578.01.T01
Chr2 exon 54562837 54563209 54562837 ID=MsG0280009578.01.T01:exon:18425;Parent=MsG0280009578.01.T01
Chr2 CDS 54568010 54568101 54568010 ID=MsG0280009578.01.T01:cds;Parent=MsG0280009578.01.T01
Chr2 CDS 54566733 54566848 54566733 ID=MsG0280009578.01.T01:cds;Parent=MsG0280009578.01.T01
Chr2 CDS 54566364 54566486 54566364 ID=MsG0280009578.01.T01:cds;Parent=MsG0280009578.01.T01
Chr2 CDS 54563898 54563953 54563898 ID=MsG0280009578.01.T01:cds;Parent=MsG0280009578.01.T01
Chr2 CDS 54562982 54563209 54562982 ID=MsG0280009578.01.T01:cds;Parent=MsG0280009578.01.T01
Chr2 three_prime_UTR 54562837 54562981 54562837 ID=MsG0280009578.01.T01:three_prime_utr;Parent=MsG0280009578.01.T01
Gene Sequence

>MsG0280009578.01.T01

ATGGAAGGAAATGGAAGTAGGAACCCTAGAATGAAAGGGTTTGCAGAGACGAGTGAAGGATTTGGGAATGTGGTGATCGGTGGAAAACAAGGGCTTGAACCTCAGGTGATTGTGTTAGCAGAGCACTTGTTTGGTTTCAATTTTGGATCGATCATGGGAAGCGATCGAAAATCAAAGAGAAGTTATCCTTCGCAATCCGAATCTGAAGATGAGAAGAAAAGCAAGAGGAAGAGAACTGTAGATGATGATGATGAGGAAAAGAAGAGCAGAAAGAGGGAAAAGAAAGAGAAAAGGAAGGATAAGAAGCATTCCAAAGATAAATATGATAAGGATAAGAAGTTAAAAGACAAGCACAAAAGTAAACGCAGCAAAAGTGAAAGAAACATGGATTTTCAAGAATTGTCCGGTGATGACTATTTTGCCAAGAATAATGAGTTTGCTACCTGGCTGAAAGAAGAGAAGAATGTGTTTTTCTCTGATCTGTTATCGGAGTCAGCACGTGAGTTGTTTGCAGAATTTGTCAAAGCTTGGAATAAAGGAAAGCTTGAATCGAATTACTATGAAGGCATTAAAACTGCGCCTCGCACAGCCCATAAATGGAAAATCAAAAAGTAG

Protein sequence

>MsG0280009578.01.T01

MEGNGSRNPRMKGFAETSEGFGNVVIGGKQGLEPQVIVLAEHLFGFNFGSIMGSDRKSKRSYPSQSESEDEKKSKRKRTVDDDDEEKKSRKREKKEKRKDKKHSKDKYDKDKKLKDKHKSKRSKSERNMDFQELSGDDYFAKNNEFATWLKEEKNVFFSDLLSESARELFAEFVKAWNKGKLESNYYEGIKTAPRTAHKWKIKK*