AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021327.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021327.01.T01 MTR_4g071860 99.000 400 4 0 1 400 1 400 0.0 812
MsG0480021327.01.T01 MTR_4g057670 98.750 400 5 0 1 400 1 400 0.0 812
MsG0480021327.01.T01 MTR_4g071880 88.750 400 31 4 1 400 1 386 0.0 700
MsG0480021327.01.T01 MTR_1g109200 82.535 355 61 1 46 400 38 391 0.0 612
MsG0480021327.01.T01 MTR_5g069055 56.818 352 147 4 53 400 8 358 2.93e-135 391
MsG0480021327.01.T01 MTR_5g096670 56.374 353 150 3 51 400 6 357 3.18e-133 386
MsG0480021327.01.T01 MTR_1g061050 54.830 352 154 4 53 400 8 358 7.95e-129 375
MsG0480021327.01.T01 MTR_5g069050 53.611 360 147 5 45 400 41 384 1.79e-124 365
MsG0480021327.01.T01 MTR_7g103920 46.809 94 26 1 157 250 11 80 3.00e-20 85.1
MsG0480021327.01.T02 MTR_4g071860 99.000 400 4 0 1 400 1 400 0.0 812
MsG0480021327.01.T02 MTR_4g057670 98.750 400 5 0 1 400 1 400 0.0 812
MsG0480021327.01.T02 MTR_4g071880 88.750 400 31 4 1 400 1 386 0.0 700
MsG0480021327.01.T02 MTR_1g109200 82.535 355 61 1 46 400 38 391 0.0 612
MsG0480021327.01.T02 MTR_5g069055 56.818 352 147 4 53 400 8 358 2.93e-135 391
MsG0480021327.01.T02 MTR_5g096670 56.374 353 150 3 51 400 6 357 3.18e-133 386
MsG0480021327.01.T02 MTR_1g061050 54.830 352 154 4 53 400 8 358 7.95e-129 375
MsG0480021327.01.T02 MTR_5g069050 53.611 360 147 5 45 400 41 384 1.79e-124 365
MsG0480021327.01.T02 MTR_7g103920 46.809 94 26 1 157 250 11 80 3.00e-20 85.1
MsG0480021327.01.T03 MTR_4g071860 99.000 400 4 0 1 400 1 400 0.0 812
MsG0480021327.01.T03 MTR_4g057670 98.750 400 5 0 1 400 1 400 0.0 812
MsG0480021327.01.T03 MTR_4g071880 88.750 400 31 4 1 400 1 386 0.0 700
MsG0480021327.01.T03 MTR_1g109200 82.535 355 61 1 46 400 38 391 0.0 612
MsG0480021327.01.T03 MTR_5g069055 56.818 352 147 4 53 400 8 358 2.93e-135 391
MsG0480021327.01.T03 MTR_5g096670 56.374 353 150 3 51 400 6 357 3.18e-133 386
MsG0480021327.01.T03 MTR_1g061050 54.830 352 154 4 53 400 8 358 7.95e-129 375
MsG0480021327.01.T03 MTR_5g069050 53.611 360 147 5 45 400 41 384 1.79e-124 365
MsG0480021327.01.T03 MTR_7g103920 46.809 94 26 1 157 250 11 80 3.00e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021327.01.T01 AT2G21330 83.333 402 62 4 1 400 1 399 0.0 688
MsG0480021327.01.T01 AT4G38970 83.709 399 61 3 4 400 2 398 0.0 681
MsG0480021327.01.T01 AT2G21330 80.846 402 62 5 1 400 1 389 0.0 659
MsG0480021327.01.T01 AT2G01140 75.063 397 92 2 4 400 2 391 0.0 611
MsG0480021327.01.T01 AT2G21330 82.903 310 48 4 1 308 1 307 0.0 523
MsG0480021327.01.T01 AT4G38970 79.630 324 55 4 4 318 2 323 0.0 518
MsG0480021327.01.T01 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T01 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T01 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T01 AT2G36460 56.818 352 147 4 53 400 8 358 6.58e-135 390
MsG0480021327.01.T01 AT3G52930 55.682 352 151 4 53 400 8 358 4.87e-132 383
MsG0480021327.01.T01 AT5G03690 55.398 352 153 3 53 400 8 359 2.43e-129 376
MsG0480021327.01.T01 AT5G03690 51.000 400 182 5 7 400 2 393 1.04e-128 376
MsG0480021327.01.T01 AT4G26520 55.398 352 152 4 53 400 8 358 7.42e-127 370
MsG0480021327.01.T01 AT4G26520 55.556 351 151 4 53 399 8 357 1.47e-126 369
MsG0480021327.01.T01 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T01 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T01 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T01 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T01 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276
MsG0480021327.01.T01 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276
MsG0480021327.01.T02 AT2G21330 83.333 402 62 4 1 400 1 399 0.0 688
MsG0480021327.01.T02 AT4G38970 83.709 399 61 3 4 400 2 398 0.0 681
MsG0480021327.01.T02 AT2G21330 80.846 402 62 5 1 400 1 389 0.0 659
MsG0480021327.01.T02 AT2G01140 75.063 397 92 2 4 400 2 391 0.0 611
MsG0480021327.01.T02 AT2G21330 82.903 310 48 4 1 308 1 307 0.0 523
MsG0480021327.01.T02 AT4G38970 79.630 324 55 4 4 318 2 323 0.0 518
MsG0480021327.01.T02 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T02 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T02 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T02 AT2G36460 56.818 352 147 4 53 400 8 358 6.58e-135 390
MsG0480021327.01.T02 AT3G52930 55.682 352 151 4 53 400 8 358 4.87e-132 383
MsG0480021327.01.T02 AT5G03690 55.398 352 153 3 53 400 8 359 2.43e-129 376
MsG0480021327.01.T02 AT5G03690 51.000 400 182 5 7 400 2 393 1.04e-128 376
MsG0480021327.01.T02 AT4G26520 55.398 352 152 4 53 400 8 358 7.42e-127 370
MsG0480021327.01.T02 AT4G26520 55.556 351 151 4 53 399 8 357 1.47e-126 369
MsG0480021327.01.T02 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T02 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T02 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T02 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T02 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276
MsG0480021327.01.T02 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276
MsG0480021327.01.T03 AT2G21330 83.333 402 62 4 1 400 1 399 0.0 688
MsG0480021327.01.T03 AT4G38970 83.709 399 61 3 4 400 2 398 0.0 681
MsG0480021327.01.T03 AT2G21330 80.846 402 62 5 1 400 1 389 0.0 659
MsG0480021327.01.T03 AT2G01140 75.063 397 92 2 4 400 2 391 0.0 611
MsG0480021327.01.T03 AT2G21330 82.903 310 48 4 1 308 1 307 0.0 523
MsG0480021327.01.T03 AT4G38970 79.630 324 55 4 4 318 2 323 0.0 518
MsG0480021327.01.T03 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T03 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T03 AT4G26530 56.780 354 148 4 51 400 6 358 2.08e-136 394
MsG0480021327.01.T03 AT2G36460 56.818 352 147 4 53 400 8 358 6.58e-135 390
MsG0480021327.01.T03 AT3G52930 55.682 352 151 4 53 400 8 358 4.87e-132 383
MsG0480021327.01.T03 AT5G03690 55.398 352 153 3 53 400 8 359 2.43e-129 376
MsG0480021327.01.T03 AT5G03690 51.000 400 182 5 7 400 2 393 1.04e-128 376
MsG0480021327.01.T03 AT4G26520 55.398 352 152 4 53 400 8 358 7.42e-127 370
MsG0480021327.01.T03 AT4G26520 55.556 351 151 4 53 399 8 357 1.47e-126 369
MsG0480021327.01.T03 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T03 AT4G26520 55.271 351 152 4 54 400 6 355 3.11e-126 368
MsG0480021327.01.T03 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T03 AT2G36460 56.343 268 112 4 137 400 1 267 9.25e-99 295
MsG0480021327.01.T03 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276
MsG0480021327.01.T03 AT5G03690 54.307 267 118 3 138 400 1 267 1.96e-91 276

Find 62 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACCCAAATGTTTAAAATT+TGG 0.199558 4:+56746557 MsG0480021327.01.T01:three_prime_UTR
CTACAAACAAACACTATAAT+TGG 0.244366 4:+56743206 None:intergenic
AACCTAAGGAAAATAATATT+AGG 0.245002 4:-56743272 None:intergenic
ATGTCTTCAATGCGGTATTT+TGG 0.245388 4:-56746128 None:intergenic
TTTGACGAACAATTCCTTCT+TGG 0.278555 4:-56746265 None:intergenic
GATGATAATTCATGCTTGTT+TGG 0.327277 4:-56743346 None:intergenic
GTCCACGAAACCCAATTAAA+AGG 0.336300 4:+56746582 MsG0480021327.01.T01:three_prime_UTR
CAATTATAGTGTTTGTTTGT+AGG 0.339982 4:-56743205 None:intergenic
CGTGCCATGGGTTTGGAGAT+TGG 0.341879 4:-56746080 None:intergenic
CATTACGTGGTTGAAATCAT+TGG 0.376955 4:-56743303 None:intergenic
AACGACACGTGCCATGGGTT+TGG 0.390092 4:-56746087 None:intergenic
ACCTAAGGAAAATAATATTA+GGG 0.396861 4:-56743271 None:intergenic
TGGGTTTGGAGATTGGTTCA+TGG 0.399088 4:-56746073 None:intergenic
CAATTCCTTCTTGGCTTCCT+CGG 0.408353 4:-56746256 None:intergenic
GGCGTATGAACCAGCTCTAA+TGG 0.449196 4:-56743677 None:intergenic
GTCAAGTGATGTCTCATTTG+CGG 0.454726 4:-56743404 None:intergenic
TTGAGCAATTGAGTTGGACT+TGG 0.467054 4:-56746205 None:intergenic
TTGTTCTTGACAAGTCTGAA+TGG 0.468236 4:+56743575 MsG0480021327.01.T01:CDS
GTTCATGGCATTCAAGTTGA+GGG 0.472908 4:-56746058 None:intergenic
TCCAACTCAATTGCTCAACT+TGG 0.475986 4:+56746210 MsG0480021327.01.T01:CDS
TGCAACCCTACTGCTCCATC+AGG 0.494718 4:+56743649 MsG0480021327.01.T01:CDS
TCCACATGTCAAGTGAAGAT+AGG 0.497175 4:+56743367 MsG0480021327.01.T01:five_prime_UTR
CAATGATTTCAACCACGTAA+TGG 0.508557 4:+56743304 MsG0480021327.01.T03:five_prime_UTR
AGTGTAAGAACTAAGAACTA+TGG 0.510513 4:+56743519 MsG0480021327.01.T01:intron
TGTTCTTGACAAGTCTGAAT+GGG 0.513891 4:+56743576 MsG0480021327.01.T01:CDS
GCTCTAATGGTAAGACCTGA+TGG 0.519825 4:-56743664 None:intergenic
GGTTCATGGCATTCAAGTTG+AGG 0.530771 4:-56746059 None:intergenic
TATGAGAACGACACGTGCCA+TGG 0.534333 4:-56746093 None:intergenic
TCAGGTCTTACCATTAGAGC+TGG 0.535329 4:+56743667 MsG0480021327.01.T01:CDS
GTAAGACCTGATGGAGCAGT+AGG 0.536429 4:-56743655 None:intergenic
GCAGTTAATGATGGTGTTGA+CGG 0.536739 4:+56746354 MsG0480021327.01.T01:three_prime_UTR
AAAATACCGCATTGAAGACA+TGG 0.548809 4:+56746130 MsG0480021327.01.T01:CDS
AGAAGAAGGTTGACGTAGGA+GGG 0.553419 4:-56743611 None:intergenic
CGCGGTCTTGACGAGCTCAT+CGG 0.558858 4:-56743698 None:intergenic
TCCAAGTTGAGCAATTGAGT+TGG 0.559400 4:-56746211 None:intergenic
TAGAAGAAGGTTGACGTAGG+AGG 0.563073 4:-56743612 None:intergenic
TGAATCCGAGGAAGCCAAGA+AGG 0.564271 4:+56746251 MsG0480021327.01.T01:CDS
ACCTATCTTCACTTGACATG+TGG 0.564740 4:-56743368 None:intergenic
AAGAAGGAATTGTTCGTCAA+AGG 0.571329 4:+56746267 MsG0480021327.01.T01:CDS
CTAACAACAGACATAGAAGA+AGG 0.574063 4:-56743625 None:intergenic
TTTGTCTGGTGGACAATCTG+AGG 0.579742 4:+56746026 MsG0480021327.01.T01:CDS
TGACAAGTCTGAATGGGTGA+AGG 0.580261 4:+56743582 MsG0480021327.01.T01:CDS
CACTGGTGAGGGTGAATCCG+AGG 0.587935 4:+56746239 MsG0480021327.01.T01:CDS
GACAAGTCTGAATGGGTGAA+GGG 0.591129 4:+56743583 MsG0480021327.01.T01:CDS
GCAGCACTAGCAGTTAATGA+TGG 0.594980 4:+56746345 MsG0480021327.01.T01:three_prime_UTR
ATGAGAACGACACGTGCCAT+GGG 0.596886 4:-56746092 None:intergenic
CTTGGAAAGTACACTGGTGA+GGG 0.616339 4:+56746228 MsG0480021327.01.T01:CDS
CAATTGAGTTGGACTTGGCG+CGG 0.616785 4:-56746200 None:intergenic
AAATACCGCATTGAAGACAT+GGG 0.626712 4:+56746131 MsG0480021327.01.T01:CDS
ACTTGGAAAGTACACTGGTG+AGG 0.631708 4:+56746227 MsG0480021327.01.T01:CDS
ACCGCATTGAAGACATGGGG+AGG 0.644971 4:+56746135 MsG0480021327.01.T01:CDS
TAAGACCTGATGGAGCAGTA+GGG 0.647498 4:-56743654 None:intergenic
TGAACCAATCTCCAAACCCA+TGG 0.649676 4:+56746076 MsG0480021327.01.T01:CDS
GCTCAACTTGGAAAGTACAC+TGG 0.658104 4:+56746222 MsG0480021327.01.T01:CDS
AGGCCGCGCAGAGAACGTGA+AGG 0.669516 4:+56746155 MsG0480021327.01.T01:CDS
CAATATGCATCACCATTACG+TGG 0.680363 4:-56743316 None:intergenic
ACATAGAAGAAGGTTGACGT+AGG 0.687898 4:-56743615 None:intergenic
CTGCCTTCACGTTCTCTGCG+CGG 0.701188 4:-56746158 None:intergenic
GCCTCCCCATGTCTTCAATG+CGG 0.705321 4:-56746136 None:intergenic
CGATGAGCTCGTCAAGACCG+CGG 0.707845 4:+56743699 MsG0480021327.01.T01:CDS
GTTAATGATGGTGTTGACGG+AGG 0.728084 4:+56746357 MsG0480021327.01.T01:three_prime_UTR
AATACCGCATTGAAGACATG+GGG 0.731314 4:+56746132 MsG0480021327.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATCATAATAATATACAT+CGG - Chr4:56744894-56744913 None:intergenic 10.0%
!! AATCACTTATATAATTTGAA+TGG - Chr4:56745422-56745441 None:intergenic 15.0%
!! ATTGTTAGTATTATTATGTT+AGG + Chr4:56743758-56743777 MsG0480021327.01.T01:intron 15.0%
!!! ACATTTTCTTGTATAAAAAA+TGG + Chr4:56743985-56744004 MsG0480021327.01.T01:intron 15.0%
!!! TTTGTTTTTTTTTTTGTTTG+TGG + Chr4:56746461-56746480 MsG0480021327.01.T01:intron 15.0%
!! AAAGAATAATGTTACGTATT+TGG - Chr4:56745936-56745955 None:intergenic 20.0%
!! AACCTAAGGAAAATAATATT+AGG - Chr4:56743275-56743294 None:intergenic 20.0%
!! ACAAATTTCAATTGCATATT+AGG + Chr4:56745297-56745316 MsG0480021327.01.T01:intron 20.0%
!! ACCTAAGGAAAATAATATTA+GGG - Chr4:56743274-56743293 None:intergenic 20.0%
!! GCTAAAATATGTCTATTTAA+TGG + Chr4:56745618-56745637 MsG0480021327.01.T01:intron 20.0%
!! TTCATATTATTGTTTATGTC+AGG - Chr4:56745004-56745023 None:intergenic 20.0%
!!! ATAAGCTATTTTTATAGCAA+AGG + Chr4:56744103-56744122 MsG0480021327.01.T01:intron 20.0%
!!! ATATTTTATTGAAGTCGTAA+AGG - Chr4:56746501-56746520 None:intergenic 20.0%
!!! TGCAATATTTTATGTTTCAT+TGG + Chr4:56744456-56744475 MsG0480021327.01.T01:intron 20.0%
!!! TGTGTAATATTTTATAGTCT+TGG + Chr4:56746416-56746435 MsG0480021327.01.T01:three_prime_UTR 20.0%
!!! TTATATCTCTCCTTTTAATT+GGG - Chr4:56746595-56746614 None:intergenic 20.0%
!!! TTTATATCTCTCCTTTTAAT+TGG - Chr4:56746596-56746615 None:intergenic 20.0%
! AATTGATGAAAAGAATAAGC+AGG + Chr4:56744860-56744879 MsG0480021327.01.T01:intron 25.0%
! ATATGCAATTGAAATTTGTG+TGG - Chr4:56745296-56745315 None:intergenic 25.0%
! CAATTATAGTGTTTGTTTGT+AGG - Chr4:56743208-56743227 None:intergenic 25.0%
! GTCAAATACAATTTGTACAT+AGG - Chr4:56745545-56745564 None:intergenic 25.0%
! TATTATGTTAGGAGTGAATA+TGG + Chr4:56743769-56743788 MsG0480021327.01.T01:intron 25.0%
! TATTTGACTAGAATGTTCTT+TGG + Chr4:56745557-56745576 MsG0480021327.01.T01:intron 25.0%
! TCCAAGATAGCTTATAAAAA+CGG - Chr4:56744168-56744187 None:intergenic 25.0%
! TCTAATAGAGTGATATCATT+TGG + Chr4:56744934-56744953 MsG0480021327.01.T01:intron 25.0%
! TGTCTATTTAATGGTTTATC+AGG + Chr4:56745627-56745646 MsG0480021327.01.T01:intron 25.0%
! TTTATGTGTCATGAACAATA+GGG + Chr4:56745079-56745098 MsG0480021327.01.T01:intron 25.0%
!! ACACCCAAATGTTTAAAATT+TGG + Chr4:56746557-56746576 MsG0480021327.01.T01:three_prime_UTR 25.0%
!! ACTGCCAAATTTTAAACATT+TGG - Chr4:56746564-56746583 None:intergenic 25.0%
!! CTGCCAAATTTTAAACATTT+GGG - Chr4:56746563-56746582 None:intergenic 25.0%
!! TCCCTAATATTATTTTCCTT+AGG + Chr4:56743270-56743289 MsG0480021327.01.T03:five_prime_UTR 25.0%
!!! AAATAGACATATTTTAGCCA+AGG - Chr4:56745616-56745635 None:intergenic 25.0%
!!! GTAAAAGTATAAGATGCTTT+TGG + Chr4:56744017-56744036 MsG0480021327.01.T01:intron 25.0%
ACATGACAGATCTTTATGTA+TGG - Chr4:56744978-56744997 None:intergenic 30.0%
AGTGTAAGAACTAAGAACTA+TGG + Chr4:56743519-56743538 MsG0480021327.01.T01:intron 30.0%
CAACAGAATGTAATTCCAAA+TGG - Chr4:56744803-56744822 None:intergenic 30.0%
CAAGAAAATGTTCTTACAAG+TGG - Chr4:56743976-56743995 None:intergenic 30.0%
GACAATCAAATTGATACATG+TGG + Chr4:56743947-56743966 MsG0480021327.01.T01:intron 30.0%
GATGATAATTCATGCTTGTT+TGG - Chr4:56743349-56743368 None:intergenic 30.0%
GCTACTCTTACTAAAAATGT+TGG + Chr4:56746289-56746308 MsG0480021327.01.T01:exon 30.0%
GTTTATGTGTCATGAACAAT+AGG + Chr4:56745078-56745097 MsG0480021327.01.T01:intron 30.0%
TAAAGTGATGTGACATAGAA+TGG + Chr4:56744371-56744390 MsG0480021327.01.T01:intron 30.0%
TTAATGGTTTATCAGGACAA+CGG + Chr4:56745634-56745653 MsG0480021327.01.T01:intron 30.0%
! AATTCTGATTTTGCTTCCAT+AGG - Chr4:56745237-56745256 None:intergenic 30.0%
! ATGAGTGTGATTTAAAACCT+TGG + Chr4:56745596-56745615 MsG0480021327.01.T01:intron 30.0%
! ATTCTGATTTTGCTTCCATA+GGG - Chr4:56745236-56745255 None:intergenic 30.0%
! TATGTATAGTTTTTGTCTGG+TGG + Chr4:56746015-56746034 MsG0480021327.01.T01:intron 30.0%
!! AAGCAGTTAATGTTTTTGTG+TGG + Chr4:56743444-56743463 MsG0480021327.01.T01:five_prime_UTR 30.0%
!! TCCGTTTTTATAAGCTATCT+TGG + Chr4:56744164-56744183 MsG0480021327.01.T01:intron 30.0%
!!! AACTTTTGAAGTAGCACAAA+AGG + Chr4:56745714-56745733 MsG0480021327.01.T01:CDS 30.0%
!!! ATGAGATGCTTCTAGTTTTA+AGG - Chr4:56743845-56743864 None:intergenic 30.0%
!!! CATTGGTTTTTTCTAACCTA+AGG - Chr4:56743289-56743308 None:intergenic 30.0%
AAAATACCGCATTGAAGACA+TGG + Chr4:56746130-56746149 MsG0480021327.01.T01:CDS 35.0%
AAATACCGCATTGAAGACAT+GGG + Chr4:56746131-56746150 MsG0480021327.01.T01:CDS 35.0%
AAGAAGGAATTGTTCGTCAA+AGG + Chr4:56746267-56746286 MsG0480021327.01.T01:CDS 35.0%
AATGAATTCAAAGAGTCCCA+AGG + Chr4:56744299-56744318 MsG0480021327.01.T01:intron 35.0%
CAATGATTTCAACCACGTAA+TGG + Chr4:56743304-56743323 MsG0480021327.01.T03:five_prime_UTR 35.0%
CACTTATAGATAAGCACTCA+AGG + Chr4:56744058-56744077 MsG0480021327.01.T01:intron 35.0%
CAGACATGATGTTTAACGTA+TGG + Chr4:56745056-56745075 MsG0480021327.01.T01:intron 35.0%
CATTACGTGGTTGAAATCAT+TGG - Chr4:56743306-56743325 None:intergenic 35.0%
CGGAATAATAAAGAAGTGGA+GGG - Chr4:56743797-56743816 None:intergenic 35.0%
CTAACAACAGACATAGAAGA+AGG - Chr4:56743628-56743647 None:intergenic 35.0%
GAAGCGGAATAATAAAGAAG+TGG - Chr4:56743801-56743820 None:intergenic 35.0%
GAGAACAATGTCCAATTTGA+GGG + Chr4:56745766-56745785 MsG0480021327.01.T01:CDS 35.0%
GATATATACTCTCCAAGTGA+TGG - Chr4:56744665-56744684 None:intergenic 35.0%
GTCTCACAATTGCTTATATC+AGG + Chr4:56744260-56744279 MsG0480021327.01.T01:intron 35.0%
GTGCTTACTAAAGCTGTATT+TGG + Chr4:56745991-56746010 MsG0480021327.01.T01:intron 35.0%
TGAAGTAGCACAAAAGGTTT+GGG + Chr4:56745720-56745739 MsG0480021327.01.T01:CDS 35.0%
TGAGAACAATGTCCAATTTG+AGG + Chr4:56745765-56745784 MsG0480021327.01.T01:CDS 35.0%
TGTTCTTGACAAGTCTGAAT+GGG + Chr4:56743576-56743595 MsG0480021327.01.T01:CDS 35.0%
TTGAAGTAGCACAAAAGGTT+TGG + Chr4:56745719-56745738 MsG0480021327.01.T01:CDS 35.0%
TTGACGTTGCATGATAATCA+GGG - Chr4:56745495-56745514 None:intergenic 35.0%
TTGTTCTTGACAAGTCTGAA+TGG + Chr4:56743575-56743594 MsG0480021327.01.T01:CDS 35.0%
TTTGACGAACAATTCCTTCT+TGG - Chr4:56746268-56746287 None:intergenic 35.0%
! ATGTCTTCAATGCGGTATTT+TGG - Chr4:56746131-56746150 None:intergenic 35.0%
! GGCTATGTATAGTTTTTGTC+TGG + Chr4:56746012-56746031 MsG0480021327.01.T01:intron 35.0%
! TCACTTGGAGAGTATATATC+TGG + Chr4:56744665-56744684 MsG0480021327.01.T01:CDS 35.0%
! TTCTGATTTTGCTTCCATAG+GGG - Chr4:56745235-56745254 None:intergenic 35.0%
!! AAAGAGAAAAAGAAGTACCG+CGG - Chr4:56743719-56743738 None:intergenic 35.0%
!!! AGATGCTTCTAGTTTTAAGG+TGG - Chr4:56743842-56743861 None:intergenic 35.0%
!!! TTGTTTTTGTTGCTTGTGTG+TGG + Chr4:56744495-56744514 MsG0480021327.01.T01:intron 35.0%
AATACCGCATTGAAGACATG+GGG + Chr4:56746132-56746151 MsG0480021327.01.T01:CDS 40.0%
ACATAGAAGAAGGTTGACGT+AGG - Chr4:56743618-56743637 None:intergenic 40.0%
ACCTATCTTCACTTGACATG+TGG - Chr4:56743371-56743390 None:intergenic 40.0%
ACCTTGTCAACTTTGATACC+AGG - Chr4:56744776-56744795 None:intergenic 40.0%
AGAAAACAATTGCTTCACCC+GGG + Chr4:56744522-56744541 MsG0480021327.01.T01:intron 40.0%
ATCGAGCAAAACATTGTTCC+TGG + Chr4:56744755-56744774 MsG0480021327.01.T01:CDS 40.0%
ATCTTGCTTGATGGAGAACA+TGG + Chr4:56745682-56745701 MsG0480021327.01.T01:CDS 40.0%
ATGAGTCCAATGCTACATGT+GGG + Chr4:56744564-56744583 MsG0480021327.01.T01:CDS 40.0%
ATTGGACATTGTTCTCAGCA+AGG - Chr4:56745762-56745781 None:intergenic 40.0%
CAATATGCATCACCATTACG+TGG - Chr4:56743319-56743338 None:intergenic 40.0%
CAGAAAACAATTGCTTCACC+CGG + Chr4:56744521-56744540 MsG0480021327.01.T01:intron 40.0%
CTCTACCAATCTACAGTTGA+TGG + Chr4:56744710-56744729 MsG0480021327.01.T01:CDS 40.0%
CTTGACGTTGCATGATAATC+AGG - Chr4:56745496-56745515 None:intergenic 40.0%
GAGAGTTTCCTCAAAGAGAA+TGG - Chr4:56744693-56744712 None:intergenic 40.0%
GCGGAATAATAAAGAAGTGG+AGG - Chr4:56743798-56743817 None:intergenic 40.0%
GGAACACAACTTCGAGTAAA+TGG - Chr4:56746626-56746645 None:intergenic 40.0%
GTCAAGTGATGTCTCATTTG+CGG - Chr4:56743407-56743426 None:intergenic 40.0%
GTCCACGAAACCCAATTAAA+AGG + Chr4:56746582-56746601 MsG0480021327.01.T01:three_prime_UTR 40.0%
GTTGACAAGGTAAAGCCATT+TGG + Chr4:56744785-56744804 MsG0480021327.01.T01:intron 40.0%
TCCAACTCAATTGCTCAACT+TGG + Chr4:56746210-56746229 MsG0480021327.01.T01:CDS 40.0%
TCCACATGTCAAGTGAAGAT+AGG + Chr4:56743367-56743386 MsG0480021327.01.T01:five_prime_UTR 40.0%
TCCTGGTATCAAAGTTGACA+AGG + Chr4:56744772-56744791 MsG0480021327.01.T01:CDS 40.0%
TCCTTCCATCAACTGTAGAT+TGG - Chr4:56744718-56744737 None:intergenic 40.0%
TGATGGAACTGTCACAAGAA+GGG - Chr4:56744648-56744667 None:intergenic 40.0%
TGTCACATACCATGATACCA+GGG - Chr4:56745909-56745928 None:intergenic 40.0%
TTGCATGATAATCAGGGTCA+TGG - Chr4:56745489-56745508 None:intergenic 40.0%
! AAGATCTCTGGTTCCACAAT+TGG - Chr4:56745667-56745686 None:intergenic 40.0%
! AGATCTCTGGTTCCACAATT+GGG - Chr4:56745666-56745685 None:intergenic 40.0%
! GCAGTTAATGATGGTGTTGA+CGG + Chr4:56746354-56746373 MsG0480021327.01.T01:three_prime_UTR 40.0%
! TCCAAGTTGAGCAATTGAGT+TGG - Chr4:56746214-56746233 None:intergenic 40.0%
! TCTGATTTTGCTTCCATAGG+GGG - Chr4:56745234-56745253 None:intergenic 40.0%
!! ACCAATCTACAGTTGATGGA+AGG + Chr4:56744714-56744733 MsG0480021327.01.T01:CDS 40.0%
!! CTCCTTTTAATTGGGTTTCG+TGG - Chr4:56746587-56746606 None:intergenic 40.0%
!! GTTCATGGCATTCAAGTTGA+GGG - Chr4:56746061-56746080 None:intergenic 40.0%
!! TTGAGCAATTGAGTTGGACT+TGG - Chr4:56746208-56746227 None:intergenic 40.0%
!!! TTCTAGTTTTAAGGTGGCTG+TGG - Chr4:56743836-56743855 None:intergenic 40.0%
ACAGTTGTGAGCATCCCAAA+CGG + Chr4:56745323-56745342 MsG0480021327.01.T01:CDS 45.0%
AGAAGAAGGTTGACGTAGGA+GGG - Chr4:56743614-56743633 None:intergenic 45.0%
ATTCATCGTTGGAACCAGCT+AGG - Chr4:56745114-56745133 None:intergenic 45.0%
CAATTCCTTCTTGGCTTCCT+CGG - Chr4:56746259-56746278 None:intergenic 45.0%
CTGGTTCCAACGATGAATCA+TGG + Chr4:56745116-56745135 MsG0480021327.01.T01:CDS 45.0%
CTTGTGACAGTTCCATCACT+TGG + Chr4:56744650-56744669 MsG0480021327.01.T01:CDS 45.0%
GAACCAGAGATCTTGCTTGA+TGG + Chr4:56745673-56745692 MsG0480021327.01.T01:CDS 45.0%
GACAAGTCTGAATGGGTGAA+GGG + Chr4:56743583-56743602 MsG0480021327.01.T01:CDS 45.0%
GATGAGTCCAATGCTACATG+TGG + Chr4:56744563-56744582 MsG0480021327.01.T01:CDS 45.0%
GCAGCACTAGCAGTTAATGA+TGG + Chr4:56746345-56746364 MsG0480021327.01.T01:three_prime_UTR 45.0%
GCTCTAATGGTAAGACCTGA+TGG - Chr4:56743667-56743686 None:intergenic 45.0%
GGTTTATCAGGACAACGGAT+TGG + Chr4:56745639-56745658 MsG0480021327.01.T01:intron 45.0%
GTATAGTCAGCAACTGTTGC+AGG - Chr4:56745850-56745869 None:intergenic 45.0%
GTGTCACATACCATGATACC+AGG - Chr4:56745910-56745929 None:intergenic 45.0%
GTGTCATGAACAATAGGGTC+TGG + Chr4:56745084-56745103 MsG0480021327.01.T01:intron 45.0%
TAAGACCTGATGGAGCAGTA+GGG - Chr4:56743657-56743676 None:intergenic 45.0%
TAGAAGAAGGTTGACGTAGG+AGG - Chr4:56743615-56743634 None:intergenic 45.0%
TCAGCTGCATACTACCAACA+AGG + Chr4:56745169-56745188 MsG0480021327.01.T01:CDS 45.0%
TCAGGTCTTACCATTAGAGC+TGG + Chr4:56743667-56743686 MsG0480021327.01.T01:CDS 45.0%
TCGCTATGCTGCAATTAGTC+AGG + Chr4:56745388-56745407 MsG0480021327.01.T01:CDS 45.0%
TCTCCATCAAGCAAGATCTC+TGG - Chr4:56745679-56745698 None:intergenic 45.0%
TGAACCAATCTCCAAACCCA+TGG + Chr4:56746076-56746095 MsG0480021327.01.T01:CDS 45.0%
TGACAAGTCTGAATGGGTGA+AGG + Chr4:56743582-56743601 MsG0480021327.01.T01:CDS 45.0%
TGAGGAGAATGCCCTCAAAT+TGG - Chr4:56745780-56745799 None:intergenic 45.0%
TTCATCGTTGGAACCAGCTA+GGG - Chr4:56745113-56745132 None:intergenic 45.0%
TTGGCACCATGATTCATCGT+TGG - Chr4:56745125-56745144 None:intergenic 45.0%
! AACGATGAATCATGGTGCCA+AGG + Chr4:56745124-56745143 MsG0480021327.01.T01:CDS 45.0%
! ACTTGGAAAGTACACTGGTG+AGG + Chr4:56746227-56746246 MsG0480021327.01.T01:CDS 45.0%
! CTTGGAAAGTACACTGGTGA+GGG + Chr4:56746228-56746247 MsG0480021327.01.T01:CDS 45.0%
! GCTCAACTTGGAAAGTACAC+TGG + Chr4:56746222-56746241 MsG0480021327.01.T01:CDS 45.0%
! GTGATGGAACTGTCACAAGA+AGG - Chr4:56744649-56744668 None:intergenic 45.0%
! TGGGTTTGGAGATTGGTTCA+TGG - Chr4:56746076-56746095 None:intergenic 45.0%
! TGTAGCATTGGACTCATCCA+TGG - Chr4:56744561-56744580 None:intergenic 45.0%
! TTTGTCTGGTGGACAATCTG+AGG + Chr4:56746026-56746045 MsG0480021327.01.T01:CDS 45.0%
!! ATCTGGTGCCATTCTCTTTG+AGG + Chr4:56744682-56744701 MsG0480021327.01.T01:CDS 45.0%
!! GGAAGCGTTTGGCTTCAATT+GGG + Chr4:56744585-56744604 MsG0480021327.01.T01:CDS 45.0%
!! GGTTCATGGCATTCAAGTTG+AGG - Chr4:56746062-56746081 None:intergenic 45.0%
!! GTTAATGATGGTGTTGACGG+AGG + Chr4:56746357-56746376 MsG0480021327.01.T01:three_prime_UTR 45.0%
!!! TAGTTTTAAGGTGGCTGTGG+TGG - Chr4:56743833-56743852 None:intergenic 45.0%
ACGCTTCCCACATGTAGCAT+TGG - Chr4:56744573-56744592 None:intergenic 50.0%
AGCACAAAAGGTTTGGGCTG+AGG + Chr4:56745726-56745745 MsG0480021327.01.T01:CDS 50.0%
AGGAGCTGAGTGCAAAGACA+AGG + Chr4:56745819-56745838 MsG0480021327.01.T01:CDS 50.0%
AGGTCTAAGAGAGAGGGAGA+AGG + Chr4:56744319-56744338 MsG0480021327.01.T01:intron 50.0%
AGTCCCAAGGTCTAAGAGAG+AGG + Chr4:56744312-56744331 MsG0480021327.01.T01:intron 50.0%
ATACCCTCAAGCTCCTTCAC+AGG + Chr4:56745866-56745885 MsG0480021327.01.T01:CDS 50.0%
ATGAGAACGACACGTGCCAT+GGG - Chr4:56746095-56746114 None:intergenic 50.0%
CATTCTCCTCAAGCCTAGCA+TGG + Chr4:56745789-56745808 MsG0480021327.01.T01:CDS 50.0%
CTCCCTCTCTCTTAGACCTT+GGG - Chr4:56744318-56744337 None:intergenic 50.0%
GTAAGACCTGATGGAGCAGT+AGG - Chr4:56743658-56743677 None:intergenic 50.0%
GTAGTATGCAGCTGAACGAG+AGG - Chr4:56745164-56745183 None:intergenic 50.0%
GTCCCAAGGTCTAAGAGAGA+GGG + Chr4:56744313-56744332 MsG0480021327.01.T01:intron 50.0%
TATGAGAACGACACGTGCCA+TGG - Chr4:56746096-56746115 None:intergenic 50.0%
TCATCGTTGGAACCAGCTAG+GGG - Chr4:56745112-56745131 None:intergenic 50.0%
TCTCCCTCTCTCTTAGACCT+TGG - Chr4:56744319-56744338 None:intergenic 50.0%
TCTCCTGTGAAGGAGCTTGA+GGG - Chr4:56745872-56745891 None:intergenic 50.0%
TGAATCCGAGGAAGCCAAGA+AGG + Chr4:56746251-56746270 MsG0480021327.01.T01:CDS 50.0%
TGTCTTTGCACTCAGCTCCT+GGG - Chr4:56745819-56745838 None:intergenic 50.0%
TTCTCCTGTGAAGGAGCTTG+AGG - Chr4:56745873-56745892 None:intergenic 50.0%
TTGTCTTTGCACTCAGCTCC+TGG - Chr4:56745820-56745839 None:intergenic 50.0%
! AAGGTGCTCGTTTCGCCAAA+TGG + Chr4:56745188-56745207 MsG0480021327.01.T01:CDS 50.0%
! GGCGTATGAACCAGCTCTAA+TGG - Chr4:56743680-56743699 None:intergenic 50.0%
! GTGGTGGAGGAGTTAAGAAG+CGG - Chr4:56743817-56743836 None:intergenic 50.0%
! TGAATCATGGTGCCAAGGTC+TGG + Chr4:56745129-56745148 MsG0480021327.01.T01:CDS 50.0%
!! CAACGGATTGGTCCCAATTG+TGG + Chr4:56745651-56745670 MsG0480021327.01.T01:CDS 50.0%
!! CAATTGAGTTGGACTTGGCG+CGG - Chr4:56746203-56746222 None:intergenic 50.0%
!! GGGAAGCGTTTGGCTTCAAT+TGG + Chr4:56744584-56744603 MsG0480021327.01.T01:CDS 50.0%
!! TGCTACATGTGGGAAGCGTT+TGG + Chr4:56744574-56744593 MsG0480021327.01.T01:CDS 50.0%
!!! TTTTAAGGTGGCTGTGGTGG+AGG - Chr4:56743830-56743849 None:intergenic 50.0%
AACGACACGTGCCATGGGTT+TGG - Chr4:56746090-56746109 None:intergenic 55.0%
AAGCCTAGCATGGTTACCCC+AGG + Chr4:56745799-56745818 MsG0480021327.01.T01:CDS 55.0%
ACCATGATACCAGGGACAGC+TGG - Chr4:56745901-56745920 None:intergenic 55.0%
ACCGCATTGAAGACATGGGG+AGG + Chr4:56746135-56746154 MsG0480021327.01.T01:CDS 55.0%
ATGATACCAGGGACAGCTGG+GGG - Chr4:56745898-56745917 None:intergenic 55.0%
ATGGCCAAAATACCACGCCC+GGG - Chr4:56744542-56744561 None:intergenic 55.0%
CATGATACCAGGGACAGCTG+GGG - Chr4:56745899-56745918 None:intergenic 55.0%
CATGGCCAAAATACCACGCC+CGG - Chr4:56744543-56744562 None:intergenic 55.0%
CCATGATACCAGGGACAGCT+GGG - Chr4:56745900-56745919 None:intergenic 55.0%
CGTGCCATGGGTTTGGAGAT+TGG - Chr4:56746083-56746102 None:intergenic 55.0%
CTGGGGGAATTCTCCTGTGA+AGG - Chr4:56745882-56745901 None:intergenic 55.0%
GCCTCCCCATGTCTTCAATG+CGG - Chr4:56746139-56746158 None:intergenic 55.0%
GGGTAACCATGCTAGGCTTG+AGG - Chr4:56745798-56745817 None:intergenic 55.0%
GTCAGCAACTGTTGCAGGAG+AGG - Chr4:56745845-56745864 None:intergenic 55.0%
GTCTTTGCACTCAGCTCCTG+GGG - Chr4:56745818-56745837 None:intergenic 55.0%
TCCTTGACAGCCAGAGCAGA+GGG - Chr4:56745350-56745369 None:intergenic 55.0%
TGCAACCCTACTGCTCCATC+AGG + Chr4:56743649-56743668 MsG0480021327.01.T01:CDS 55.0%
TGGCGAAACGAGCACCTTGT+TGG - Chr4:56745186-56745205 None:intergenic 55.0%
TTCCATAGGGGGATCGTGCA+GGG - Chr4:56745223-56745242 None:intergenic 55.0%
TTCCTTGACAGCCAGAGCAG+AGG - Chr4:56745351-56745370 None:intergenic 55.0%
! CAAGAAGGGTACGCCATGCT+TGG - Chr4:56744634-56744653 None:intergenic 55.0%
! GCAGGGGTACACTCACCATT+TGG - Chr4:56745206-56745225 None:intergenic 55.0%
! TCATGGTGCCAAGGTCTGGA+CGG + Chr4:56745133-56745152 MsG0480021327.01.T01:CDS 55.0%
! TTCACCCGGGCGTGGTATTT+TGG + Chr4:56744535-56744554 MsG0480021327.01.T01:CDS 55.0%
!! CCATGCTTGGCGGTTAGCTT+CGG - Chr4:56744621-56744640 None:intergenic 55.0%
ACAATTGCTTCACCCGGGCG+TGG + Chr4:56744527-56744546 MsG0480021327.01.T01:CDS 60.0%
AGAATTCCCCCAGCTGTCCC+TGG + Chr4:56745889-56745908 MsG0480021327.01.T01:CDS 60.0%
AGCATAGCGAGCCAAACCCC+AGG - Chr4:56745378-56745397 None:intergenic 60.0%
AGGCAAGACCGTCCAGACCT+TGG - Chr4:56745144-56745163 None:intergenic 60.0%
CAAGGAAGCAGCCTGGGGTT+TGG + Chr4:56745364-56745383 MsG0480021327.01.T01:CDS 60.0%
CACTGGTGAGGGTGAATCCG+AGG + Chr4:56746239-56746258 MsG0480021327.01.T01:CDS 60.0%
CCAGAGCAGAGGGACCGTTT+GGG - Chr4:56745340-56745359 None:intergenic 60.0%
CCCAGCTGTCCCTGGTATCA+TGG + Chr4:56745897-56745916 MsG0480021327.01.T01:CDS 60.0%
CCGAAGCTAACCGCCAAGCA+TGG + Chr4:56744618-56744637 MsG0480021327.01.T01:CDS 60.0%
CGATGAGCTCGTCAAGACCG+CGG + Chr4:56743699-56743718 MsG0480021327.01.T01:CDS 60.0%
CGCGGTCTTGACGAGCTCAT+CGG - Chr4:56743701-56743720 None:intergenic 60.0%
CTGCCTTCACGTTCTCTGCG+CGG - Chr4:56746161-56746180 None:intergenic 60.0%
CTTCCATAGGGGGATCGTGC+AGG - Chr4:56745224-56745243 None:intergenic 60.0%
GCTCCTGGGGTAACCATGCT+AGG - Chr4:56745805-56745824 None:intergenic 60.0%
GCTGTCAAGGAAGCAGCCTG+GGG + Chr4:56745359-56745378 MsG0480021327.01.T01:CDS 60.0%
GGCTGTCAAGGAAGCAGCCT+GGG + Chr4:56745358-56745377 MsG0480021327.01.T01:CDS 60.0%
TCCATAGGGGGATCGTGCAG+GGG - Chr4:56745222-56745241 None:intergenic 60.0%
TCCCTCTGCTCTGGCTGTCA+AGG + Chr4:56745346-56745365 MsG0480021327.01.T01:CDS 60.0%
TGGCTGTCAAGGAAGCAGCC+TGG + Chr4:56745357-56745376 MsG0480021327.01.T01:CDS 60.0%
! GAAGGGTACGCCATGCTTGG+CGG - Chr4:56744631-56744650 None:intergenic 60.0%
!!! CGGGCGTGGTATTTTGGCCA+TGG + Chr4:56744541-56744560 MsG0480021327.01.T01:CDS 60.0%
ACCCCTGCACGATCCCCCTA+TGG + Chr4:56745218-56745237 MsG0480021327.01.T01:intron 65.0%
AGGCCGCGCAGAGAACGTGA+AGG + Chr4:56746155-56746174 MsG0480021327.01.T01:CDS 65.0%
CCCAAACGGTCCCTCTGCTC+TGG + Chr4:56745337-56745356 MsG0480021327.01.T01:CDS 65.0%
GCCAGAGCAGAGGGACCGTT+TGG - Chr4:56745341-56745360 None:intergenic 65.0%
TAGGGTCTGGTGCCCCTAGC+TGG + Chr4:56745097-56745116 MsG0480021327.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56743208 56746646 56743208 ID=MsG0480021327.01;Name=MsG0480021327.01
Chr4 mRNA 56743361 56746609 56743361 ID=MsG0480021327.01.T01;Parent=MsG0480021327.01;Name=MsG0480021327.01.T01;_AED=0.47;_eAED=0.47;_QI=157|1|1|1|0.71|0.5|8|281|400
Chr4 exon 56746024 56746448 56746024 ID=MsG0480021327.01.T01:exon:6454;Parent=MsG0480021327.01.T01
Chr4 exon 56746475 56746609 56746475 ID=MsG0480021327.01.T01:exon:6455;Parent=MsG0480021327.01.T01
Chr4 five_prime_UTR 56743361 56743513 56743361 ID=MsG0480021327.01.T01:five_prime_utr;Parent=MsG0480021327.01.T01
Chr4 five_prime_UTR 56743534 56743537 56743534 ID=MsG0480021327.01.T01:five_prime_utr;Parent=MsG0480021327.01.T01
Chr4 CDS 56743538 56743720 56743538 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 CDS 56744524 56744793 56744524 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 CDS 56745100 56745209 56745100 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 CDS 56745319 56745409 56745319 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 CDS 56745649 56745918 56745649 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 CDS 56746024 56746302 56746024 ID=MsG0480021327.01.T01:cds;Parent=MsG0480021327.01.T01
Chr4 three_prime_UTR 56746303 56746448 56746303 ID=MsG0480021327.01.T01:three_prime_utr;Parent=MsG0480021327.01.T01
Chr4 three_prime_UTR 56746475 56746609 56746475 ID=MsG0480021327.01.T01:three_prime_utr;Parent=MsG0480021327.01.T01
Chr4 mRNA 56743361 56746646 56743361 ID=MsG0480021327.01.T02;Parent=MsG0480021327.01;Name=MsG0480021327.01.T02;_AED=0.47;_eAED=0.47;_QI=157|1|1|1|0.83|0.71|7|344|400
Chr4 five_prime_UTR 56743361 56743513 56743361 ID=MsG0480021327.01.T02:five_prime_utr;Parent=MsG0480021327.01.T02
Chr4 five_prime_UTR 56743534 56743537 56743534 ID=MsG0480021327.01.T02:five_prime_utr;Parent=MsG0480021327.01.T02
Chr4 CDS 56743538 56743720 56743538 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 CDS 56744524 56744793 56744524 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 CDS 56745100 56745209 56745100 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 CDS 56745319 56745409 56745319 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 CDS 56745649 56745918 56745649 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 CDS 56746024 56746302 56746024 ID=MsG0480021327.01.T02:cds;Parent=MsG0480021327.01.T02
Chr4 three_prime_UTR 56746303 56746646 56746303 ID=MsG0480021327.01.T02:three_prime_utr;Parent=MsG0480021327.01.T02
Chr4 mRNA 56743208 56746646 56743208 ID=MsG0480021327.01.T03;Parent=MsG0480021327.01;Name=MsG0480021327.01.T03;_AED=0.47;_eAED=0.47;_QI=330|1|1|1|1|1|6|344|400
Chr4 exon 56743208 56743720 56743208 ID=MsG0480021327.01.T03:exon:6457;Parent=MsG0480021327.01.T03
Chr4 five_prime_UTR 56743208 56743537 56743208 ID=MsG0480021327.01.T03:five_prime_utr;Parent=MsG0480021327.01.T03
Chr4 CDS 56743538 56743720 56743538 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 CDS 56744524 56744793 56744524 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 CDS 56745100 56745209 56745100 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 CDS 56745319 56745409 56745319 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 CDS 56745649 56745918 56745649 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 CDS 56746024 56746302 56746024 ID=MsG0480021327.01.T03:cds;Parent=MsG0480021327.01.T03
Chr4 three_prime_UTR 56746303 56746646 56746303 ID=MsG0480021327.01.T03:three_prime_utr;Parent=MsG0480021327.01.T03
Gene Sequence

>MsG0480021327.01.T01

ATGGCTTCTGCTTCAGCATCTTGTTTCAAGTCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCCTACGTCAACCTTCTTCTATGTCTGTTGTTAGATGCAACCCTACTGCTCCATCAGGTCTTACCATTAGAGCTGGTTCATACGCCGATGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCCGGGCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACATGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGCTAACCGCCAAGCATGGCGTACCCTTCTTGTGACAGTTCCATCACTTGGAGAGTATATATCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCTACAGTTGATGGAAGGAAGATTGTTGACGTGCTTATCGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTCTGGTGCCCCTAGCTGGTTCCAACGATGAATCATGGTGCCAAGGTCTGGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACAGTTGTGAGCATCCCAAACGGTCCCTCTGCTCTGGCTGTCAAGGAAGCAGCCTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTGCAAAGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATACGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGCAGAGAACGTGAAGGCAGCTCAAGAAGCGCTTCTTTTCCGCGCCAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAATTGTTCGTCAAAGGCTACTCTTACTAA

>MsG0480021327.01.T02

ATGGCTTCTGCTTCAGCATCTTGTTTCAAGTCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCCTACGTCAACCTTCTTCTATGTCTGTTGTTAGATGCAACCCTACTGCTCCATCAGGTCTTACCATTAGAGCTGGTTCATACGCCGATGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCCGGGCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACATGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGCTAACCGCCAAGCATGGCGTACCCTTCTTGTGACAGTTCCATCACTTGGAGAGTATATATCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCTACAGTTGATGGAAGGAAGATTGTTGACGTGCTTATCGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTCTGGTGCCCCTAGCTGGTTCCAACGATGAATCATGGTGCCAAGGTCTGGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACAGTTGTGAGCATCCCAAACGGTCCCTCTGCTCTGGCTGTCAAGGAAGCAGCCTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTGCAAAGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATACGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGCAGAGAACGTGAAGGCAGCTCAAGAAGCGCTTCTTTTCCGCGCCAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAATTGTTCGTCAAAGGCTACTCTTACTAA

>MsG0480021327.01.T03

ATGGCTTCTGCTTCAGCATCTTGTTTCAAGTCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCCTACGTCAACCTTCTTCTATGTCTGTTGTTAGATGCAACCCTACTGCTCCATCAGGTCTTACCATTAGAGCTGGTTCATACGCCGATGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCCGGGCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACATGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGCTAACCGCCAAGCATGGCGTACCCTTCTTGTGACAGTTCCATCACTTGGAGAGTATATATCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCTACAGTTGATGGAAGGAAGATTGTTGACGTGCTTATCGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTCTGGTGCCCCTAGCTGGTTCCAACGATGAATCATGGTGCCAAGGTCTGGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACAGTTGTGAGCATCCCAAACGGTCCCTCTGCTCTGGCTGTCAAGGAAGCAGCCTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTGCAAAGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATACGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGCAGAGAACGTGAAGGCAGCTCAAGAAGCGCTTCTTTTCCGCGCCAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAATTGTTCGTCAAAGGCTACTCTTACTAA

Protein sequence

>MsG0480021327.01.T01

MASASASCFKSSLVLDKSEWVKGQTLLRQPSSMSVVRCNPTAPSGLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAWRTLLVTVPSLGEYISGAILFEETLYQSTVDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRAENVKAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*

>MsG0480021327.01.T02

MASASASCFKSSLVLDKSEWVKGQTLLRQPSSMSVVRCNPTAPSGLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAWRTLLVTVPSLGEYISGAILFEETLYQSTVDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRAENVKAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*

>MsG0480021327.01.T03

MASASASCFKSSLVLDKSEWVKGQTLLRQPSSMSVVRCNPTAPSGLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAWRTLLVTVPSLGEYISGAILFEETLYQSTVDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRAENVKAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*