AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032330 MtrunA17_Chr1g0198761 74.966 735 183 1 31 764 16 750 0.0 1165
Msa0032330 MtrunA17_Chr5g0431001 91.701 482 40 0 1 482 1 482 0.0 926
Msa0032330 MtrunA17_Chr2g0276841 47.520 625 317 5 60 681 69 685 0.0 620
Msa0032330 MtrunA17_Chr2g0294841 42.496 713 374 8 60 747 44 745 0.0 594
Msa0032330 MtrunA17_Chr2g0290391 45.412 643 314 7 61 683 51 676 0.0 565
Msa0032330 MtrunA17_Chr1g0202341 29.412 697 445 17 13 692 10 676 4.35e-85 284
Msa0032330 MtrunA17_Chr5g0448761 30.217 599 391 10 50 634 52 637 9.42e-81 275
Msa0032330 MtrunA17_Chr2g0296781 29.197 685 428 19 67 724 3 657 3.63e-77 263
Msa0032330 MtrunA17_Chr3g0080351 30.703 583 354 19 61 627 76 624 4.31e-74 257
Msa0032330 MtrunA17_Chr6g0477261 31.703 552 335 14 194 718 4 540 2.41e-71 246
Msa0032330 MtrunA17_Chr2g0329031 27.207 691 435 17 67 734 20 665 7.02e-71 246
Msa0032330 MtrunA17_Chr6g0458391 28.250 577 375 11 58 627 222 766 6.76e-68 239
Msa0032330 MtrunA17_Chr8g0363841 28.497 579 379 14 62 625 18 576 7.43e-67 234
Msa0032330 MtrunA17_Chr5g0441581 29.899 495 319 10 141 623 102 580 4.04e-66 232
Msa0032330 MtrunA17_Chr1g0203051 27.152 604 388 15 28 613 52 621 4.45e-66 231
Msa0032330 MtrunA17_Chr2g0287651 26.694 723 476 20 45 749 60 746 2.46e-65 233
Msa0032330 MtrunA17_Chr1g0207551 29.534 579 374 14 61 627 34 590 7.78e-65 231
Msa0032330 MtrunA17_Chr3g0082121 29.776 581 364 17 60 627 42 591 1.68e-63 225
Msa0032330 MtrunA17_Chr5g0440451 24.811 661 437 13 61 695 43 669 5.89e-61 221
Msa0032330 MtrunA17_Chr1g0203721 24.714 700 477 13 64 734 66 744 8.66e-60 218
Msa0032330 MtrunA17_Chr2g0287061 26.833 600 361 14 40 625 165 700 1.91e-59 216
Msa0032330 MtrunA17_Chr2g0324011 27.022 581 385 12 61 625 10 567 7.11e-57 204
Msa0032330 MtrunA17_Chr1g0196541 26.897 580 372 14 67 623 3 553 2.09e-56 206
Msa0032330 MtrunA17_Chr5g0448511 30.952 378 255 3 249 621 16 392 6.42e-56 201
Msa0032330 MtrunA17_Chr2g0291581 25.619 687 430 17 38 685 43 687 1.77e-52 194
Msa0032330 MtrunA17_Chr3g0118611 28.538 424 292 6 203 621 79 496 1.98e-51 192
Msa0032330 MtrunA17_Chr5g0430921 96.471 85 3 0 680 764 1 85 3.26e-51 173
Msa0032330 MtrunA17_Chr3g0081281 83.696 92 15 0 210 301 2 93 1.85e-46 160
Msa0032330 MtrunA17_Chr2g0291591 24.472 568 372 14 20 565 25 557 2.15e-38 150
Msa0032330 MtrunA17_Chr1g0164591 34.314 204 132 2 262 464 106 308 2.41e-35 137
Msa0032330 MtrunA17_Chr7g0258861 25.676 296 194 6 61 347 10 288 2.20e-22 98.6
Msa0032330 MtrunA17_Chr2g0308841 26.066 211 151 3 418 623 14 224 2.67e-17 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032330 AT1G10240.2 45.710 676 352 8 30 697 11 679 0.0 615
Msa0032330 AT1G10240.1 45.710 676 352 8 30 697 11 679 0.0 615
Msa0032330 AT5G28530.3 41.882 659 357 5 31 678 27 670 0.0 549
Msa0032330 AT5G28530.2 41.882 659 357 5 31 678 27 670 0.0 549
Msa0032330 AT5G28530.1 41.730 659 362 5 31 678 27 674 0.0 548
Msa0032330 AT5G28530.5 38.213 649 332 8 31 678 27 607 6.63e-152 457
Msa0032330 AT5G28530.4 38.059 649 337 8 31 678 27 611 4.38e-151 455
Msa0032330 AT4G38180.1 31.196 577 377 8 61 628 73 638 1.21e-82 280
Msa0032330 AT4G15090.1 28.302 689 448 18 61 727 51 715 3.93e-80 274
Msa0032330 AT4G15090.5 28.302 689 448 18 61 727 51 715 3.93e-80 274
Msa0032330 AT4G15090.3 28.302 689 448 18 61 727 51 715 3.93e-80 274
Msa0032330 AT4G15090.2 28.302 689 448 18 61 727 51 715 3.93e-80 274
Msa0032330 AT4G15090.4 28.302 689 448 18 61 727 51 715 3.93e-80 274
Msa0032330 AT1G76320.3 27.915 566 368 13 67 621 3 539 1.54e-64 228
Msa0032330 AT1G76320.2 27.915 566 368 13 67 621 3 539 2.43e-64 228
Msa0032330 AT1G76320.1 27.915 566 368 13 67 621 3 539 2.46e-64 228
Msa0032330 AT1G76320.4 27.915 566 368 13 67 621 3 539 2.46e-64 228
Msa0032330 AT3G22170.2 26.606 654 415 22 49 679 55 666 1.13e-63 228
Msa0032330 AT3G22170.1 26.606 654 415 22 49 679 55 666 1.13e-63 228
Msa0032330 AT3G06250.2 25.868 576 358 13 61 627 190 705 2.88e-57 209
Msa0032330 AT3G06250.1 25.868 576 358 13 61 627 190 705 2.88e-57 209
Msa0032330 AT3G06250.3 25.868 576 358 13 61 627 190 705 2.88e-57 209
Msa0032330 AT5G18960.2 25.538 650 403 16 47 682 197 779 5.95e-56 206
Msa0032330 AT5G18960.1 25.538 650 403 16 47 682 197 779 5.95e-56 206
Msa0032330 AT2G27110.2 26.164 623 406 17 61 675 49 625 1.32e-55 205
Msa0032330 AT2G27110.1 26.164 623 406 17 61 675 49 625 1.32e-55 205
Msa0032330 AT2G27110.3 28.604 444 298 11 240 675 48 480 1.00e-51 192
Msa0032330 AT2G32250.5 25.682 440 315 5 256 691 180 611 1.88e-48 183
Msa0032330 AT2G32250.8 25.682 440 315 5 256 691 139 570 2.40e-48 183
Msa0032330 AT2G32250.2 25.682 440 315 5 256 691 180 611 2.54e-48 184
Msa0032330 AT2G32250.4 25.682 440 315 5 256 691 180 611 2.54e-48 184
Msa0032330 AT2G32250.7 25.682 440 315 5 256 691 139 570 2.56e-48 183
Msa0032330 AT2G32250.6 25.682 440 315 5 256 691 180 611 2.81e-48 183
Msa0032330 AT2G32250.1 25.682 440 315 5 256 691 180 611 2.81e-48 183
Msa0032330 AT2G32250.3 25.682 440 315 5 256 691 180 611 2.81e-48 183
Msa0032330 AT4G38170.1 30.000 390 262 6 244 627 16 400 8.03e-48 178
Msa0032330 AT4G19990.3 26.271 590 354 17 63 625 23 558 1.87e-47 181
Msa0032330 AT4G19990.4 26.271 590 354 17 63 625 23 558 1.87e-47 181
Msa0032330 AT4G19990.5 26.271 590 354 17 63 625 23 558 2.20e-47 180
Msa0032330 AT4G19990.7 26.271 590 354 17 63 625 37 572 2.30e-47 180
Msa0032330 AT4G19990.6 26.271 590 354 17 63 625 23 558 3.46e-47 180
Msa0032330 AT4G19990.2 26.271 590 354 17 63 625 23 558 3.46e-47 180
Msa0032330 AT1G52520.1 25.970 593 369 18 61 624 85 636 1.13e-44 172
Msa0032330 AT4G19990.1 25.746 536 333 14 112 625 9 501 5.72e-43 166
Msa0032330 AT1G80010.1 24.228 615 365 19 61 624 95 659 4.56e-40 158

Find 137 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTACATGACTAGATTT+TGG 0.131548 1_1:-59385905 None:intergenic
TCTTTACCCATCGTAAATTT+TGG 0.158198 1_1:+59385273 Msa0032330:CDS
TCTGAAGTATTGTTAATTAA+TGG 0.164332 1_1:+59386681 Msa0032330:three_prime_UTR
CCAATTAAAACTTACTTATT+AGG 0.177601 1_1:-59386304 None:intergenic
ATGAGATGCCTCTTGGAATA+TGG 0.196486 1_1:+59384772 Msa0032330:CDS
TTCTCACAACCACGAGTTAT+TGG 0.199264 1_1:+59384350 Msa0032330:CDS
ATCACATGTTCTTGAGTTTC+AGG 0.210618 1_1:-59386061 None:intergenic
ACAGTTTGATCAAAACTATT+TGG 0.235348 1_1:-59386455 None:intergenic
CTCATGTTGAAGCAACTTAA+AGG 0.248230 1_1:-59385627 None:intergenic
TGAGCAGTCTTGATTTCTTT+TGG 0.253030 1_1:-59383473 None:intergenic
TGTTTATTTGCAAAACAAAA+TGG 0.260407 1_1:+59384084 Msa0032330:CDS
AAAATCTGTCAAACTTGTTT+TGG 0.261322 1_1:-59385390 None:intergenic
ATTCGTGCATATGAAGCTTT+TGG 0.265394 1_1:+59384708 Msa0032330:CDS
CAATATGAATTCACAATTGA+TGG 0.266214 1_1:+59384642 Msa0032330:CDS
CTGAAGTATTGTTAATTAAT+GGG 0.295771 1_1:+59386682 Msa0032330:three_prime_UTR
TTCCTTCGCATGGGCTATAA+AGG 0.299718 1_1:+59384863 Msa0032330:CDS
AATATCATCATAAAGATAAA+AGG 0.310779 1_1:+59386034 Msa0032330:CDS
TCAAGAACATGTGATTGATT+TGG 0.314506 1_1:+59386069 Msa0032330:CDS
CATCAATTGTGAATTCATAT+TGG 0.326055 1_1:-59384641 None:intergenic
GCAGCTTCAACCCCTCCTTT+TGG 0.339248 1_1:-59386175 None:intergenic
ATTCAATCATATAGTGGTAT+TGG 0.341059 1_1:+59384552 Msa0032330:CDS
ACTCTCGCTATAAGACTTAC+AGG 0.343612 1_1:-59384462 None:intergenic
CAAATTGGAGCATATTGTTT+GGG 0.347369 1_1:+59384671 Msa0032330:CDS
GAGCATATTGTTTGGGCATT+TGG 0.348974 1_1:+59384678 Msa0032330:CDS
CCTTTACCCTTTACTTTGTT+CGG 0.349412 1_1:+59383527 Msa0032330:five_prime_UTR
ACAAATTGGAGCATATTGTT+TGG 0.352856 1_1:+59384670 Msa0032330:CDS
AATTGATGGAAGTAACAAAT+TGG 0.358783 1_1:+59384656 Msa0032330:CDS
ATGACAACGACGAGGCTTCT+TGG 0.366012 1_1:-59386197 None:intergenic
TCAGTCTCTAATTCGATGTT+TGG 0.372448 1_1:+59385955 Msa0032330:CDS
AACGTCACAGTCAGCATTGT+TGG 0.377007 1_1:-59386104 None:intergenic
ATGGTCTCACAGTTTGGTTT+GGG 0.387072 1_1:+59385227 Msa0032330:CDS
GTAGTTACTAAGAGAAGAAT+TGG 0.389295 1_1:+59384291 Msa0032330:CDS
AATGGTCTCACAGTTTGGTT+TGG 0.398201 1_1:+59385226 Msa0032330:CDS
CCTCAAGTCACTAACATTGA+TGG 0.399508 1_1:+59383895 Msa0032330:CDS
AGTGAATTAGACAGATGAAT+TGG 0.402311 1_1:+59386510 Msa0032330:three_prime_UTR
GCAATGGCTTCTTTAATTGA+AGG 0.406562 1_1:-59385035 None:intergenic
TCAAATATTTGCCCTTCAAA+AGG 0.411166 1_1:-59383925 None:intergenic
ATACTAGTAATTACACAGTT+TGG 0.415911 1_1:-59386640 None:intergenic
ATCCATCGGGTGTTTATAAG+AGG 0.417116 1_1:+59384163 Msa0032330:CDS
TTTGCTGGAATGACAACAAC+AGG 0.418779 1_1:+59385323 Msa0032330:CDS
GTCATCTTGAAATAGTGAAT+TGG 0.425948 1_1:+59386419 Msa0032330:three_prime_UTR
AAAGTAATGGTCTCACAGTT+TGG 0.427267 1_1:+59385221 Msa0032330:CDS
TGAGATGCCTCTTGGAATAT+GGG 0.433904 1_1:+59384773 Msa0032330:CDS
TTGGGCCTTAGCTTATTTGA+AGG 0.435274 1_1:+59385292 Msa0032330:CDS
TATACGACCACCATCAACTT+TGG 0.437731 1_1:-59385717 None:intergenic
CGAACAAAGTAAAGGGTAAA+GGG 0.438866 1_1:-59383526 None:intergenic
CTTTAAACATGAGTTTCATA+AGG 0.439926 1_1:+59385157 Msa0032330:CDS
GACGAGGCATGTTCTTCAAT+AGG 0.443666 1_1:-59385587 None:intergenic
TGATTAGTTCCACCACAATC+TGG 0.446933 1_1:-59386223 None:intergenic
AACCGTTATGAGATGCCTCT+TGG 0.448749 1_1:+59384765 Msa0032330:CDS
AAAGACAAGTGAACGAGAAC+AGG 0.453486 1_1:+59385991 Msa0032330:CDS
CATGTAATAAACTGCAATGA+TGG 0.453622 1_1:+59385917 Msa0032330:CDS
TCAGCTTCCTCCATCTTGTT+CGG 0.457961 1_1:+59383493 Msa0032330:five_prime_UTR
GTTTGTCATCGTGGTGGTAT+TGG 0.458689 1_1:+59384192 Msa0032330:CDS
ATGCGATCTTGATCAACAAT+TGG 0.465554 1_1:-59384414 None:intergenic
CTCACAGTTTGGTTTGGGTG+TGG 0.468983 1_1:+59385232 Msa0032330:CDS
ATAACGGTTTATTCTATATG+TGG 0.472493 1_1:-59384751 None:intergenic
CCGAACAAAGTAAAGGGTAA+AGG 0.477098 1_1:-59383527 None:intergenic
TATAAGACTTACAGGGCAAC+CGG 0.483233 1_1:-59384454 None:intergenic
CTTGAGTTAGAGAAAAGAAC+AGG 0.494786 1_1:+59384486 Msa0032330:CDS
AAAACAAAAGGTCGGCCAAA+AGG 0.495104 1_1:+59386145 Msa0032330:CDS
TTGATAGGATCATGAAGGGT+TGG 0.498564 1_1:+59386391 Msa0032330:three_prime_UTR
TGAAGCAACTTAAAGGCATA+AGG 0.499495 1_1:-59385620 None:intergenic
AGAAGATTTCTTCCTTCGCA+TGG 0.503824 1_1:+59384853 Msa0032330:CDS
CGTTGTCATGTTCCAGATTG+TGG 0.504732 1_1:+59386211 Msa0032330:CDS
AATTGTGAATTCATATTGGA+AGG 0.507660 1_1:-59384637 None:intergenic
CCAAAAGGATCAAGACCAAA+AGG 0.514192 1_1:+59386160 Msa0032330:CDS
CTTTCTCGTCTCCATCGAAA+AGG 0.515070 1_1:-59385872 None:intergenic
GTCAAAATTAGAAATCAAGC+TGG 0.517568 1_1:+59385509 Msa0032330:CDS
TTTAATTGAAGGATCTTGAT+CGG 0.518039 1_1:-59385024 None:intergenic
TGGTAATAATAAACTATAGC+AGG 0.519610 1_1:-59386620 None:intergenic
ATTGGAATGTTACGATAAGC+AGG 0.522557 1_1:-59384396 None:intergenic
TAGTTTGATCAAAGCAGCTT+CGG 0.523562 1_1:-59386533 None:intergenic
ATGTTATTGACTTGAGGCAA+GGG 0.525418 1_1:-59383997 None:intergenic
TAAGCAATGATGCTAGTGAT+TGG 0.525487 1_1:+59383866 Msa0032330:CDS
ACCACGCAAAACTGTTGAAG+TGG 0.526679 1_1:+59384218 Msa0032330:CDS
TTAGAGAAAAGAACAGGCAC+AGG 0.528687 1_1:+59384492 Msa0032330:CDS
TGGGTTGGTGTTGATAATCA+TGG 0.529258 1_1:+59384792 Msa0032330:CDS
ATACTATTATTGTCTAAAGC+CGG 0.531055 1_1:+59384435 Msa0032330:CDS
TTCCAAGAGGCATCTCATAA+CGG 0.531646 1_1:-59384767 None:intergenic
CAACATCATACCAAAGTTGA+TGG 0.538288 1_1:+59385707 Msa0032330:CDS
TGAACGAGAATGGAAAGTAA+TGG 0.544871 1_1:+59385208 Msa0032330:CDS
TTGCACAACATAAGAGCCAT+TGG 0.551354 1_1:-59385687 None:intergenic
CTCAAGTCACTAACATTGAT+GGG 0.551567 1_1:+59383896 Msa0032330:CDS
TAAGAGAAGAATTGGCATTG+AGG 0.553953 1_1:+59384299 Msa0032330:CDS
GAAGATTTCTTCCTTCGCAT+GGG 0.556681 1_1:+59384854 Msa0032330:CDS
GTGCTTTGATAGGATCATGA+AGG 0.556862 1_1:+59386386 Msa0032330:three_prime_UTR
CAAGTCAATAACATTGATGA+GGG 0.558520 1_1:+59384006 Msa0032330:CDS
AAAGTCCTTCAAATAAGCTA+AGG 0.560983 1_1:-59385297 None:intergenic
ACATGTGATTGATTTGGAAG+AGG 0.565753 1_1:+59386075 Msa0032330:CDS
GTTTGGCAATTCCATTGCAA+TGG 0.567761 1_1:-59385051 None:intergenic
GGAAAATGTGTTGTAATCTG+AGG 0.568974 1_1:-59385566 None:intergenic
ATGTGATTGTAGTGCAAAGA+TGG 0.570079 1_1:+59384269 Msa0032330:CDS
ATGTTAGTGACTTGAGGCAA+GGG 0.572230 1_1:-59383889 None:intergenic
GTGTCAGAAGAGAATCCATC+GGG 0.572540 1_1:+59384150 Msa0032330:CDS
TCATCAATGTTATTGACTTG+AGG 0.573525 1_1:-59384003 None:intergenic
AATTAAAGAAGCCATTGCAA+TGG 0.576797 1_1:+59385040 Msa0032330:CDS
TAGAAATCAAGCTGGAGAAG+AGG 0.577533 1_1:+59385517 Msa0032330:CDS
CGAGTTATTGGATGACAAAG+AGG 0.580002 1_1:+59384362 Msa0032330:CDS
AATGTTATTGACTTGAGGCA+AGG 0.580693 1_1:-59383998 None:intergenic
AGTCACTAACATTGATGGGT+GGG 0.589348 1_1:+59383900 Msa0032330:CDS
TTGTCGCAAAGCTGTCAAGT+TGG 0.589381 1_1:+59385102 Msa0032330:CDS
TCATCATATCTCGAACCTAG+TGG 0.597376 1_1:-59385134 None:intergenic
AATGTTAGTGACTTGAGGCA+AGG 0.597462 1_1:-59383890 None:intergenic
AGGGAATTTGTTTGTCATCG+TGG 0.598966 1_1:+59384183 Msa0032330:CDS
TCCCTCTTATAAACACCCGA+TGG 0.599604 1_1:-59384165 None:intergenic
GCAGCAATTGAAGCTGCCAA+TGG 0.600590 1_1:+59385671 Msa0032330:CDS
TACCTTTATAGCCCATGCGA+AGG 0.601051 1_1:-59384865 None:intergenic
TATCAGATGACCGAACAAGA+TGG 0.602390 1_1:-59383503 None:intergenic
TCAAGTCAATAACATTGATG+AGG 0.603097 1_1:+59384005 Msa0032330:CDS
CTGTTGAAGTGGAAAATCAA+AGG 0.606328 1_1:+59384229 Msa0032330:CDS
CTTTGTCATCCAATAACTCG+TGG 0.606716 1_1:-59384359 None:intergenic
AAGGATCAAGACCAAAAGGA+GGG 0.611165 1_1:+59386164 Msa0032330:CDS
CCATCAATGTTAGTGACTTG+AGG 0.613145 1_1:-59383895 None:intergenic
CTAAGGCCCAAAATTTACGA+TGG 0.615020 1_1:-59385280 None:intergenic
TAAGGCCCAAAATTTACGAT+GGG 0.615697 1_1:-59385279 None:intergenic
ATGCCTCTTGGAATATGGGT+TGG 0.616141 1_1:+59384777 Msa0032330:CDS
GAATTTGTTTGTCATCGTGG+TGG 0.618777 1_1:+59384186 Msa0032330:CDS
AAGTCACTAACATTGATGGG+TGG 0.624878 1_1:+59383899 Msa0032330:CDS
TCCATCGGGTGTTTATAAGA+GGG 0.625908 1_1:+59384164 Msa0032330:CDS
ACGAGAACAGGTTGCCACAA+GGG 0.630576 1_1:+59386003 Msa0032330:CDS
TGTGTCAGAAGAGAATCCAT+CGG 0.632507 1_1:+59384149 Msa0032330:CDS
AACGAGAACAGGTTGCCACA+AGG 0.633734 1_1:+59386002 Msa0032330:CDS
TACTTATTAGGAGATTGAGA+AGG 0.635742 1_1:-59386292 None:intergenic
TGTCATGTTCCAGATTGTGG+TGG 0.637809 1_1:+59386214 Msa0032330:CDS
CTCTCGCTATAAGACTTACA+GGG 0.647869 1_1:-59384461 None:intergenic
AAAGGATCAAGACCAAAAGG+AGG 0.655085 1_1:+59386163 Msa0032330:CDS
CAGATGACCGAACAAGATGG+AGG 0.662759 1_1:-59383500 None:intergenic
TAGAGACTGAAATTTAGCAG+AGG 0.662901 1_1:-59385942 None:intergenic
ACACCAACCCATATTCCAAG+AGG 0.676376 1_1:-59384780 None:intergenic
TGCTTTGATAGGATCATGAA+GGG 0.676443 1_1:+59386387 Msa0032330:three_prime_UTR
AAGTTTGAAAGATCGAGATG+AGG 0.682349 1_1:+59384614 Msa0032330:CDS
CATCATACCAAAGTTGATGG+TGG 0.683172 1_1:+59385710 Msa0032330:CDS
AGGATCAAGACCAAAAGGAG+GGG 0.696841 1_1:+59386165 Msa0032330:CDS
AAGTCAATAACATTGATGAG+GGG 0.714581 1_1:+59384007 Msa0032330:CDS
ATAAGGTGTGAGTATAGACG+AGG 0.720548 1_1:-59385603 None:intergenic
TCTGGAACATGACAACGACG+AGG 0.797744 1_1:-59386205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATAAATAAAATAGAATTT+GGG - chr1_1:59383770-59383789 None:intergenic 10.0%
!! ATCATAAATAAAATAGAATT+TGG - chr1_1:59383771-59383790 None:intergenic 10.0%
!!! TAATATTAACTGTATTTTTA+TGG + chr1_1:59386364-59386383 Msa0032330:three_prime_UTR 10.0%
!! TGAAAAAAATAATATTTACC+TGG - chr1_1:59383600-59383619 None:intergenic 15.0%
!! TTAGTTAAGAATTATATACA+TGG - chr1_1:59383715-59383734 None:intergenic 15.0%
!! CATAAATAAAATAGAATTTG+GGG - chr1_1:59383769-59383788 None:intergenic 15.0%
!!! AATTTTATTCAATCATATAG+TGG + chr1_1:59384546-59384565 Msa0032330:CDS 15.0%
!! AATATCATCATAAAGATAAA+AGG + chr1_1:59386034-59386053 Msa0032330:CDS 15.0%
!!! TATGTAATTAGTATATTTTG+TGG + chr1_1:59386554-59386573 Msa0032330:three_prime_UTR 15.0%
!!! GTTTGTTTCTTTTCTTTTAA+TGG + chr1_1:59383645-59383664 Msa0032330:intron 20.0%
!! TGTTTATTTGCAAAACAAAA+TGG + chr1_1:59384084-59384103 Msa0032330:CDS 20.0%
!!! AACAAAATGGATTTTCTATT+AGG + chr1_1:59384097-59384116 Msa0032330:CDS 20.0%
!!! CTAATATCTTTTTCTAAGAA+TGG - chr1_1:59384525-59384544 None:intergenic 20.0%
!!! CATGGAAATTCAATTTTTTT+TGG + chr1_1:59384810-59384829 Msa0032330:CDS 20.0%
!!! TGATTGTTATATTTTTGTGT+AGG + chr1_1:59385475-59385494 Msa0032330:intron 20.0%
!!! TTATTACATGACTAGATTTT+GGG - chr1_1:59385907-59385926 None:intergenic 20.0%
!!! TTTATTACATGACTAGATTT+TGG - chr1_1:59385908-59385927 None:intergenic 20.0%
!! CCAATTAAAACTTACTTATT+AGG - chr1_1:59386307-59386326 None:intergenic 20.0%
!!! CCTAATAAGTAAGTTTTAAT+TGG + chr1_1:59386304-59386323 Msa0032330:exon 20.0%
! AACACAAACTTAGCTAATTT+GGG - chr1_1:59383687-59383706 None:intergenic 25.0%
! AAACACAAACTTAGCTAATT+TGG - chr1_1:59383688-59383707 None:intergenic 25.0%
!! TCAAATATTTTCCCTTCAAA+AGG - chr1_1:59384036-59384055 None:intergenic 25.0%
!! ATACTATTATTGTCTAAAGC+CGG + chr1_1:59384435-59384454 Msa0032330:CDS 25.0%
! ATTCAATCATATAGTGGTAT+TGG + chr1_1:59384552-59384571 Msa0032330:CDS 25.0%
! AATTGTGAATTCATATTGGA+AGG - chr1_1:59384640-59384659 None:intergenic 25.0%
! CATCAATTGTGAATTCATAT+TGG - chr1_1:59384644-59384663 None:intergenic 25.0%
! CAATATGAATTCACAATTGA+TGG + chr1_1:59384642-59384661 Msa0032330:CDS 25.0%
! AATTGATGGAAGTAACAAAT+TGG + chr1_1:59384656-59384675 Msa0032330:CDS 25.0%
! ATAACGGTTTATTCTATATG+TGG - chr1_1:59384754-59384773 None:intergenic 25.0%
! TTTAATTGAAGGATCTTGAT+CGG - chr1_1:59385027-59385046 None:intergenic 25.0%
! CTTTAAACATGAGTTTCATA+AGG + chr1_1:59385157-59385176 Msa0032330:CDS 25.0%
!!! AAAATCTGTCAAACTTGTTT+TGG - chr1_1:59385393-59385412 None:intergenic 25.0%
!!! TGTTATATTTTTGTGTAGGT+TGG + chr1_1:59385479-59385498 Msa0032330:intron 25.0%
!! TGTAAAGAGTTTCAATTTTC+AGG + chr1_1:59385779-59385798 Msa0032330:CDS 25.0%
! TTGTTTCAAAAACAAAAGGT+CGG + chr1_1:59386137-59386156 Msa0032330:CDS 25.0%
! TCCAAACAAAAAGAGAAAAA+TGG + chr1_1:59386261-59386280 Msa0032330:CDS 25.0%
!!! TCCATTTTTCTCTTTTTGTT+TGG - chr1_1:59386265-59386284 None:intergenic 25.0%
!!! TATTTTTATGGTGCTTTGAT+AGG + chr1_1:59386376-59386395 Msa0032330:three_prime_UTR 25.0%
! ACAGTTTGATCAAAACTATT+TGG - chr1_1:59386458-59386477 None:intergenic 25.0%
!! TGTGTAATTAGTGAATTTTG+TGG + chr1_1:59386475-59386494 Msa0032330:three_prime_UTR 25.0%
! TGGTAATAATAAACTATAGC+AGG - chr1_1:59386623-59386642 None:intergenic 25.0%
! ATACTAGTAATTACACAGTT+TGG - chr1_1:59386643-59386662 None:intergenic 25.0%
! TTTTGACCGAACAAAGTAAA+GGG - chr1_1:59383536-59383555 None:intergenic 30.0%
! TTTTTGACCGAACAAAGTAA+AGG - chr1_1:59383537-59383556 None:intergenic 30.0%
AACAAACAATGAGTTCAAGA+TGG - chr1_1:59383632-59383651 None:intergenic 30.0%
ACACAAACTTAGCTAATTTG+GGG - chr1_1:59383686-59383705 None:intergenic 30.0%
TCAAATATTTGCCCTTCAAA+AGG - chr1_1:59383928-59383947 None:intergenic 30.0%
!! TCATCAATGTTATTGACTTG+AGG - chr1_1:59384006-59384025 None:intergenic 30.0%
TCAAGTCAATAACATTGATG+AGG + chr1_1:59384005-59384024 Msa0032330:CDS 30.0%
CAAGTCAATAACATTGATGA+GGG + chr1_1:59384006-59384025 Msa0032330:CDS 30.0%
AAGTCAATAACATTGATGAG+GGG + chr1_1:59384007-59384026 Msa0032330:CDS 30.0%
GTAGTTACTAAGAGAAGAAT+TGG + chr1_1:59384291-59384310 Msa0032330:CDS 30.0%
! AATTGGCATTGAGGAAAAAT+GGG + chr1_1:59384308-59384327 Msa0032330:CDS 30.0%
ACAAATTGGAGCATATTGTT+TGG + chr1_1:59384670-59384689 Msa0032330:CDS 30.0%
CAAATTGGAGCATATTGTTT+GGG + chr1_1:59384671-59384690 Msa0032330:CDS 30.0%
! ATTTTCCTTTCACAAAAGCT+AGG - chr1_1:59384986-59385005 None:intergenic 30.0%
! TGATCGGTAAGAATTGTTTT+TGG - chr1_1:59385011-59385030 None:intergenic 30.0%
AATTAAAGAAGCCATTGCAA+TGG + chr1_1:59385040-59385059 Msa0032330:CDS 30.0%
! CAAAATGCATGTTTTGTGTT+TGG - chr1_1:59385071-59385090 None:intergenic 30.0%
! CAAAACATGCATTTTGCATA+TGG + chr1_1:59385075-59385094 Msa0032330:CDS 30.0%
! TCTTTACCCATCGTAAATTT+TGG + chr1_1:59385273-59385292 Msa0032330:CDS 30.0%
! CTTTACCCATCGTAAATTTT+GGG + chr1_1:59385274-59385293 Msa0032330:CDS 30.0%
AAAGTCCTTCAAATAAGCTA+AGG - chr1_1:59385300-59385319 None:intergenic 30.0%
!!! TTGAAGGACTTTTTTTTTGC+TGG + chr1_1:59385308-59385327 Msa0032330:CDS 30.0%
GTCAAAATTAGAAATCAAGC+TGG + chr1_1:59385509-59385528 Msa0032330:CDS 30.0%
!! CGAAAAGGAAGATATTTTGA+TGG - chr1_1:59385860-59385879 None:intergenic 30.0%
! CAAAATATCTTCCTTTTCGA+TGG + chr1_1:59385861-59385880 Msa0032330:CDS 30.0%
CATGTAATAAACTGCAATGA+TGG + chr1_1:59385917-59385936 Msa0032330:CDS 30.0%
TCAAGAACATGTGATTGATT+TGG + chr1_1:59386069-59386088 Msa0032330:CDS 30.0%
!!! CCTTTTGTTTTTGAAACAAC+AGG - chr1_1:59386136-59386155 None:intergenic 30.0%
!! CCTGTTGTTTCAAAAACAAA+AGG + chr1_1:59386133-59386152 Msa0032330:CDS 30.0%
TACTTATTAGGAGATTGAGA+AGG - chr1_1:59386295-59386314 None:intergenic 30.0%
GTCATCTTGAAATAGTGAAT+TGG + chr1_1:59386419-59386438 Msa0032330:three_prime_UTR 30.0%
AGTGAATTAGACAGATGAAT+TGG + chr1_1:59386510-59386529 Msa0032330:three_prime_UTR 30.0%
CGAACAAAGTAAAGGGTAAA+GGG - chr1_1:59383529-59383548 None:intergenic 35.0%
CCTTTACCCTTTACTTTGTT+CGG + chr1_1:59383527-59383546 Msa0032330:five_prime_UTR 35.0%
TCAGTCAAAAAGCTAATTCC+AGG + chr1_1:59383579-59383598 Msa0032330:five_prime_UTR 35.0%
CACAAACTTAGCTAATTTGG+GGG - chr1_1:59383685-59383704 None:intergenic 35.0%
TAAGCAATGATGCTAGTGAT+TGG + chr1_1:59383866-59383885 Msa0032330:CDS 35.0%
CTCAAGTCACTAACATTGAT+GGG + chr1_1:59383896-59383915 Msa0032330:CDS 35.0%
!! ATGTTATTGACTTGAGGCAA+GGG - chr1_1:59384000-59384019 None:intergenic 35.0%
!! AATGTTATTGACTTGAGGCA+AGG - chr1_1:59384001-59384020 None:intergenic 35.0%
CTGTTGAAGTGGAAAATCAA+AGG + chr1_1:59384229-59384248 Msa0032330:CDS 35.0%
ATGTGATTGTAGTGCAAAGA+TGG + chr1_1:59384269-59384288 Msa0032330:CDS 35.0%
TAAGAGAAGAATTGGCATTG+AGG + chr1_1:59384299-59384318 Msa0032330:CDS 35.0%
! GAATTGGCATTGAGGAAAAA+TGG + chr1_1:59384307-59384326 Msa0032330:CDS 35.0%
ATTGGAATGTTACGATAAGC+AGG - chr1_1:59384399-59384418 None:intergenic 35.0%
ATGCGATCTTGATCAACAAT+TGG - chr1_1:59384417-59384436 None:intergenic 35.0%
CTTGAGTTAGAGAAAAGAAC+AGG + chr1_1:59384486-59384505 Msa0032330:CDS 35.0%
AAGTTTGAAAGATCGAGATG+AGG + chr1_1:59384614-59384633 Msa0032330:CDS 35.0%
! ATTCGTGCATATGAAGCTTT+TGG + chr1_1:59384708-59384727 Msa0032330:CDS 35.0%
!! AGTTTCCTAGCTTTTGTGAA+AGG + chr1_1:59384978-59384997 Msa0032330:CDS 35.0%
GCAATGGCTTCTTTAATTGA+AGG - chr1_1:59385038-59385057 None:intergenic 35.0%
!!! AGTTGGTTTTCTTTTCCACT+AGG + chr1_1:59385119-59385138 Msa0032330:CDS 35.0%
! CAGATGATTTTGAACGAGAA+TGG + chr1_1:59385198-59385217 Msa0032330:CDS 35.0%
TGAACGAGAATGGAAAGTAA+TGG + chr1_1:59385208-59385227 Msa0032330:CDS 35.0%
AAAGTAATGGTCTCACAGTT+TGG + chr1_1:59385221-59385240 Msa0032330:CDS 35.0%
TAAGGCCCAAAATTTACGAT+GGG - chr1_1:59385282-59385301 None:intergenic 35.0%
GGAAAATGTGTTGTAATCTG+AGG - chr1_1:59385569-59385588 None:intergenic 35.0%
! TGAAGCAACTTAAAGGCATA+AGG - chr1_1:59385623-59385642 None:intergenic 35.0%
CTCATGTTGAAGCAACTTAA+AGG - chr1_1:59385630-59385649 None:intergenic 35.0%
CAACATCATACCAAAGTTGA+TGG + chr1_1:59385707-59385726 Msa0032330:CDS 35.0%
TAGAGACTGAAATTTAGCAG+AGG - chr1_1:59385945-59385964 None:intergenic 35.0%
TCAGTCTCTAATTCGATGTT+TGG + chr1_1:59385955-59385974 Msa0032330:CDS 35.0%
! GATATTTTCTAACTCCCTTG+TGG - chr1_1:59386020-59386039 None:intergenic 35.0%
ATCACATGTTCTTGAGTTTC+AGG - chr1_1:59386064-59386083 None:intergenic 35.0%
!! ACATGTGATTGATTTGGAAG+AGG + chr1_1:59386075-59386094 Msa0032330:CDS 35.0%
TGCTTTGATAGGATCATGAA+GGG + chr1_1:59386387-59386406 Msa0032330:three_prime_UTR 35.0%
TAGTTTGATCAAAGCAGCTT+CGG - chr1_1:59386536-59386555 None:intergenic 35.0%
TATCAGATGACCGAACAAGA+TGG - chr1_1:59383506-59383525 None:intergenic 40.0%
CCGAACAAAGTAAAGGGTAA+AGG - chr1_1:59383530-59383549 None:intergenic 40.0%
!! GCTTTTTGACTGAAGCAAGA+TGG - chr1_1:59383572-59383591 None:intergenic 40.0%
ATGTTAGTGACTTGAGGCAA+GGG - chr1_1:59383892-59383911 None:intergenic 40.0%
AATGTTAGTGACTTGAGGCA+AGG - chr1_1:59383893-59383912 None:intergenic 40.0%
CCATCAATGTTAGTGACTTG+AGG - chr1_1:59383898-59383917 None:intergenic 40.0%
CCTCAAGTCACTAACATTGA+TGG + chr1_1:59383895-59383914 Msa0032330:CDS 40.0%
AAGTCACTAACATTGATGGG+TGG + chr1_1:59383899-59383918 Msa0032330:CDS 40.0%
! AGTCACTAACATTGATGGGT+GGG + chr1_1:59383900-59383919 Msa0032330:CDS 40.0%
! ATGAGGGGATTCCTTTTGAA+GGG + chr1_1:59384022-59384041 Msa0032330:CDS 40.0%
TGTGTCAGAAGAGAATCCAT+CGG + chr1_1:59384149-59384168 Msa0032330:CDS 40.0%
ATCCATCGGGTGTTTATAAG+AGG + chr1_1:59384163-59384182 Msa0032330:CDS 40.0%
TCCATCGGGTGTTTATAAGA+GGG + chr1_1:59384164-59384183 Msa0032330:CDS 40.0%
! AGGGAATTTGTTTGTCATCG+TGG + chr1_1:59384183-59384202 Msa0032330:CDS 40.0%
! GAATTTGTTTGTCATCGTGG+TGG + chr1_1:59384186-59384205 Msa0032330:CDS 40.0%
TTCTCACAACCACGAGTTAT+TGG + chr1_1:59384350-59384369 Msa0032330:CDS 40.0%
CTTTGTCATCCAATAACTCG+TGG - chr1_1:59384362-59384381 None:intergenic 40.0%
CGAGTTATTGGATGACAAAG+AGG + chr1_1:59384362-59384381 Msa0032330:CDS 40.0%
TATAAGACTTACAGGGCAAC+CGG - chr1_1:59384457-59384476 None:intergenic 40.0%
CTCTCGCTATAAGACTTACA+GGG - chr1_1:59384464-59384483 None:intergenic 40.0%
ACTCTCGCTATAAGACTTAC+AGG - chr1_1:59384465-59384484 None:intergenic 40.0%
TTAGAGAAAAGAACAGGCAC+AGG + chr1_1:59384492-59384511 Msa0032330:CDS 40.0%
GAGCATATTGTTTGGGCATT+TGG + chr1_1:59384678-59384697 Msa0032330:CDS 40.0%
!! TTCCAAGAGGCATCTCATAA+CGG - chr1_1:59384770-59384789 None:intergenic 40.0%
ATGAGATGCCTCTTGGAATA+TGG + chr1_1:59384772-59384791 Msa0032330:CDS 40.0%
TGAGATGCCTCTTGGAATAT+GGG + chr1_1:59384773-59384792 Msa0032330:CDS 40.0%
!! TGGGTTGGTGTTGATAATCA+TGG + chr1_1:59384792-59384811 Msa0032330:CDS 40.0%
AGAAGATTTCTTCCTTCGCA+TGG + chr1_1:59384853-59384872 Msa0032330:CDS 40.0%
GAAGATTTCTTCCTTCGCAT+GGG + chr1_1:59384854-59384873 Msa0032330:CDS 40.0%
GTTTGGCAATTCCATTGCAA+TGG - chr1_1:59385054-59385073 None:intergenic 40.0%
TCATCATATCTCGAACCTAG+TGG - chr1_1:59385137-59385156 None:intergenic 40.0%
AATGGTCTCACAGTTTGGTT+TGG + chr1_1:59385226-59385245 Msa0032330:CDS 40.0%
! ATGGTCTCACAGTTTGGTTT+GGG + chr1_1:59385227-59385246 Msa0032330:CDS 40.0%
CTAAGGCCCAAAATTTACGA+TGG - chr1_1:59385283-59385302 None:intergenic 40.0%
TTGGGCCTTAGCTTATTTGA+AGG + chr1_1:59385292-59385311 Msa0032330:CDS 40.0%
TTTGCTGGAATGACAACAAC+AGG + chr1_1:59385323-59385342 Msa0032330:CDS 40.0%
TAGAAATCAAGCTGGAGAAG+AGG + chr1_1:59385517-59385536 Msa0032330:CDS 40.0%
ATAAGGTGTGAGTATAGACG+AGG - chr1_1:59385606-59385625 None:intergenic 40.0%
TTGCACAACATAAGAGCCAT+TGG - chr1_1:59385690-59385709 None:intergenic 40.0%
!! CATCATACCAAAGTTGATGG+TGG + chr1_1:59385710-59385729 Msa0032330:CDS 40.0%
TATACGACCACCATCAACTT+TGG - chr1_1:59385720-59385739 None:intergenic 40.0%
AAAGACAAGTGAACGAGAAC+AGG + chr1_1:59385991-59386010 Msa0032330:CDS 40.0%
AAAACAAAAGGTCGGCCAAA+AGG + chr1_1:59386145-59386164 Msa0032330:CDS 40.0%
!!! CCTTTTGGTCTTGATCCTTT+TGG - chr1_1:59386163-59386182 None:intergenic 40.0%
CCAAAAGGATCAAGACCAAA+AGG + chr1_1:59386160-59386179 Msa0032330:CDS 40.0%
AAAGGATCAAGACCAAAAGG+AGG + chr1_1:59386163-59386182 Msa0032330:CDS 40.0%
AAGGATCAAGACCAAAAGGA+GGG + chr1_1:59386164-59386183 Msa0032330:CDS 40.0%
! TGATTAGTTCCACCACAATC+TGG - chr1_1:59386226-59386245 None:intergenic 40.0%
GTGCTTTGATAGGATCATGA+AGG + chr1_1:59386386-59386405 Msa0032330:three_prime_UTR 40.0%
TTGATAGGATCATGAAGGGT+TGG + chr1_1:59386391-59386410 Msa0032330:three_prime_UTR 40.0%
TCAGCTTCCTCCATCTTGTT+CGG + chr1_1:59383493-59383512 Msa0032330:five_prime_UTR 45.0%
!! ATGGGTGGGTTCCTTTTGAA+GGG + chr1_1:59383914-59383933 Msa0032330:CDS 45.0%
! GATGAGGGGATTCCTTTTGA+AGG + chr1_1:59384021-59384040 Msa0032330:CDS 45.0%
GTGTCAGAAGAGAATCCATC+GGG + chr1_1:59384150-59384169 Msa0032330:CDS 45.0%
TCCCTCTTATAAACACCCGA+TGG - chr1_1:59384168-59384187 None:intergenic 45.0%
GTTTGTCATCGTGGTGGTAT+TGG + chr1_1:59384192-59384211 Msa0032330:CDS 45.0%
ACCACGCAAAACTGTTGAAG+TGG + chr1_1:59384218-59384237 Msa0032330:CDS 45.0%
! TCCACTTCAACAGTTTTGCG+TGG - chr1_1:59384222-59384241 None:intergenic 45.0%
! TGGCATTGAGGAAAAATGGG+TGG + chr1_1:59384311-59384330 Msa0032330:CDS 45.0%
AACCGTTATGAGATGCCTCT+TGG + chr1_1:59384765-59384784 Msa0032330:CDS 45.0%
ATGCCTCTTGGAATATGGGT+TGG + chr1_1:59384777-59384796 Msa0032330:CDS 45.0%
ACACCAACCCATATTCCAAG+AGG - chr1_1:59384783-59384802 None:intergenic 45.0%
! TTCCTTCGCATGGGCTATAA+AGG + chr1_1:59384863-59384882 Msa0032330:CDS 45.0%
TACCTTTATAGCCCATGCGA+AGG - chr1_1:59384868-59384887 None:intergenic 45.0%
TTGTCGCAAAGCTGTCAAGT+TGG + chr1_1:59385102-59385121 Msa0032330:CDS 45.0%
GACGAGGCATGTTCTTCAAT+AGG - chr1_1:59385590-59385609 None:intergenic 45.0%
CTTTCTCGTCTCCATCGAAA+AGG - chr1_1:59385875-59385894 None:intergenic 45.0%
AACGTCACAGTCAGCATTGT+TGG - chr1_1:59386107-59386126 None:intergenic 45.0%
AGGATCAAGACCAAAAGGAG+GGG + chr1_1:59386165-59386184 Msa0032330:CDS 45.0%
CGTTGTCATGTTCCAGATTG+TGG + chr1_1:59386211-59386230 Msa0032330:CDS 45.0%
TGTCATGTTCCAGATTGTGG+TGG + chr1_1:59386214-59386233 Msa0032330:CDS 45.0%
!!! ATTTTTATTTTTAAGAAAAT+AGG + chr1_1:59383802-59383821 Msa0032330:intron 5.0%
CAGATGACCGAACAAGATGG+AGG - chr1_1:59383503-59383522 None:intergenic 50.0%
!! GATGGGTGGGTTCCTTTTGA+AGG + chr1_1:59383913-59383932 Msa0032330:CDS 50.0%
!! CTCACAGTTTGGTTTGGGTG+TGG + chr1_1:59385232-59385251 Msa0032330:CDS 50.0%
GCAGCAATTGAAGCTGCCAA+TGG + chr1_1:59385671-59385690 Msa0032330:CDS 50.0%
AACGAGAACAGGTTGCCACA+AGG + chr1_1:59386002-59386021 Msa0032330:CDS 50.0%
ACGAGAACAGGTTGCCACAA+GGG + chr1_1:59386003-59386022 Msa0032330:CDS 50.0%
ATGACAACGACGAGGCTTCT+TGG - chr1_1:59386200-59386219 None:intergenic 50.0%
! TCTGGAACATGACAACGACG+AGG - chr1_1:59386208-59386227 None:intergenic 50.0%
! GCAGCTTCAACCCCTCCTTT+TGG - chr1_1:59386178-59386197 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59383476 59386702 59383476 ID=Msa0032330;Name=Msa0032330
chr1_1 mRNA 59383476 59386702 59383476 ID=Msa0032330-mRNA-1;Parent=Msa0032330;Name=Msa0032330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=154|1|1|1|0.66|0.5|4|387|764
chr1_1 exon 59383476 59383600 59383476 ID=Msa0032330-mRNA-1:exon:18271;Parent=Msa0032330-mRNA-1
chr1_1 exon 59383824 59384884 59383824 ID=Msa0032330-mRNA-1:exon:18272;Parent=Msa0032330-mRNA-1
chr1_1 exon 59384978 59385421 59384978 ID=Msa0032330-mRNA-1:exon:18273;Parent=Msa0032330-mRNA-1
chr1_1 exon 59385497 59386702 59385497 ID=Msa0032330-mRNA-1:exon:18274;Parent=Msa0032330-mRNA-1
chr1_1 five_prime_UTR 59383476 59383600 59383476 ID=Msa0032330-mRNA-1:five_prime_utr;Parent=Msa0032330-mRNA-1
chr1_1 five_prime_UTR 59383824 59383852 59383824 ID=Msa0032330-mRNA-1:five_prime_utr;Parent=Msa0032330-mRNA-1
chr1_1 CDS 59383853 59384884 59383853 ID=Msa0032330-mRNA-1:cds;Parent=Msa0032330-mRNA-1
chr1_1 CDS 59384978 59385421 59384978 ID=Msa0032330-mRNA-1:cds;Parent=Msa0032330-mRNA-1
chr1_1 CDS 59385497 59386315 59385497 ID=Msa0032330-mRNA-1:cds;Parent=Msa0032330-mRNA-1
chr1_1 three_prime_UTR 59386316 59386702 59386316 ID=Msa0032330-mRNA-1:three_prime_utr;Parent=Msa0032330-mRNA-1
Gene Sequence

>Msa0032330

ATGATATCTGAAGTAAGCAATGATGCTAGTGATTGGCCCTTGCCTCAAGTCACTAACATTGATGGGTGGGTTCCTTTTGAAGGGCAAATATTTGAAGATGATGAATATGTAAATTCTTTAACATTTCAAGAGCTACAACATGAACCCTTGCCTCAAGTCAATAACATTGATGAGGGGATTCCTTTTGAAGGGAAAATATTTGAAAGTGATAATGCTGCTTTTGAATTTTATTGTTTATTTGCAAAACAAAATGGATTTTCTATTAGGCGTGATCACATTTATAAATCTTGTAAATTTGTGTCAGAAGAGAATCCATCGGGTGTTTATAAGAGGGAATTTGTTTGTCATCGTGGTGGTATTGGTAAACCACGCAAAACTGTTGAAGTGGAAAATCAAAGGAAACGAAAATCTTCAAGATGTGATTGTAGTGCAAAGATGGTAGTTACTAAGAGAAGAATTGGCATTGAGGAAAAATGGGTGGTTAAACATTTCAACAATTCTCACAACCACGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCTGCTTATCGTAACATTCCAATTGTTGATCAAGATCGCATACTATTATTGTCTAAAGCCGGTTGCCCTGTAAGTCTTATAGCGAGAGTGCTTGAGTTAGAGAAAAGAACAGGCACAGGAAATTTACCATTCTTAGAAAAAGATATTAGAAATTTTATTCAATCATATAGTGGTATTGGTAAAGAAAGTGATGCTTCAGATGTTCTCAGATTGTGCAAAAGTTTGAAAGATCGAGATGAGGCCTTCCAATATGAATTCACAATTGATGGAAGTAACAAATTGGAGCATATTGTTTGGGCATTTGGTGATTCAATTCGTGCATATGAAGCTTTTGGAGATGTTGTAGTTTTTGATACCACATATAGAATAAACCGTTATGAGATGCCTCTTGGAATATGGGTTGGTGTTGATAATCATGGAAATTCAATTTTTTTTGGTTGCGTTCTATTGCGAAATGAGAAGATTTCTTCCTTCGCATGGGCTATAAAGAGTTTCCTAGCTTTTGTGAAAGGAAAATATCCAAAAACAATTCTTACCGATCAAGATCCTTCAATTAAAGAAGCCATTGCAATGGAATTGCCAAACACAAAACATGCATTTTGCATATGGCATATTGTCGCAAAGCTGTCAAGTTGGTTTTCTTTTCCACTAGGTTCGAGATATGATGACTTTAAACATGAGTTTCATAAGGTGTATCATTTAGAATGTGCAGATGATTTTGAACGAGAATGGAAAGTAATGGTCTCACAGTTTGGTTTGGGTGTGGATAAGCATATTGACTTGCTCTTTACCCATCGTAAATTTTGGGCCTTAGCTTATTTGAAGGACTTTTTTTTTGCTGGAATGACAACAACAGGACGCTCAGAATCGATAAATTCATATATAAAAAGATTCTTAGATGCCAAAACAAGTTTGACAGATTTTGTAAATCAAGTTGGTGTTGCTGTCAAAATTAGAAATCAAGCTGGAGAAGAGGCACGAATGCGTCAAAAGTATCATAATCCTCAGATTACAACACATTTTCCTATTGAAGAACATGCCTCGTCTATACTCACACCTTATGCCTTTAAGTTGCTTCAACATGAGATCGAATTATCTGCAAAGTATGCAGCAATTGAAGCTGCCAATGGCTCTTATGTTGTGCAACATCATACCAAAGTTGATGGTGGTCGTATAGTAAGTTTGATAAAAGAAGAAGAGTCAATTCATTGTTCTTGTAAAGAGTTTCAATTTTCAGGAATAATATGTAGACATGCAATTCGAGTGCTAATGTTGAAAAATTATTTTGTTCTTCCATCAAAATATCTTCCTTTTCGATGGAGACGAGAAAGTTCATTGATCCCAAAATCTAGTCATGTAATAAACTGCAATGATGGATCCTCTGCTAAATTTCAGTCTCTAATTCGATGTTTGGAAGTCGAATCATTAAAGACAAGTGAACGAGAACAGGTTGCCACAAGGGAGTTAGAAAATATCATCATAAAGATAAAAGGCATGCCTGAAACTCAAGAACATGTGATTGATTTGGAAGAGGATGTTTCCAACAATGCTGACTGTGACGTTGAAAATCCTGTTGTTTCAAAAACAAAAGGTCGGCCAAAAGGATCAAGACCAAAAGGAGGGGTTGAAGCTGCCAAGAAGCCTCGTCGTTGTCATGTTCCAGATTGTGGTGGAACTAATCACGACTCACGAAACTGTCCAAACAAAAAGAGAAAAATGGAAGTGTTGCCTTCTCAATCTCCTAATAAGTAA
Protein sequence

>Msa0032330

MISEVSNDASDWPLPQVTNIDGWVPFEGQIFEDDEYVNSLTFQELQHEPLPQVNNIDEGIPFEGKIFESDNAAFEFYCLFAKQNGFSIRRDHIYKSCKFVSEENPSGVYKREFVCHRGGIGKPRKTVEVENQRKRKSSRCDCSAKMVVTKRRIGIEEKWVVKHFNNSHNHELLDDKEVQFLPAYRNIPIVDQDRILLLSKAGCPVSLIARVLELEKRTGTGNLPFLEKDIRNFIQSYSGIGKESDASDVLRLCKSLKDRDEAFQYEFTIDGSNKLEHIVWAFGDSIRAYEAFGDVVVFDTTYRINRYEMPLGIWVGVDNHGNSIFFGCVLLRNEKISSFAWAIKSFLAFVKGKYPKTILTDQDPSIKEAIAMELPNTKHAFCIWHIVAKLSSWFSFPLGSRYDDFKHEFHKVYHLECADDFEREWKVMVSQFGLGVDKHIDLLFTHRKFWALAYLKDFFFAGMTTTGRSESINSYIKRFLDAKTSLTDFVNQVGVAVKIRNQAGEEARMRQKYHNPQITTHFPIEEHASSILTPYAFKLLQHEIELSAKYAAIEAANGSYVVQHHTKVDGGRIVSLIKEEESIHCSCKEFQFSGIICRHAIRVLMLKNYFVLPSKYLPFRWRRESSLIPKSSHVINCNDGSSAKFQSLIRCLEVESLKTSEREQVATRELENIIIKIKGMPETQEHVIDLEEDVSNNADCDVENPVVSKTKGRPKGSRPKGGVEAAKKPRRCHVPDCGGTNHDSRNCPNKKRKMEVLPSQSPNK*