AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082580 MtrunA17_Chr7g0270251 98.614 433 6 0 1 433 1 433 0.0 885
Msa1082580 MtrunA17_Chr1g0194351 68.868 424 104 4 1 412 1 408 0.0 578
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082580 AT2G47210.3 69.161 441 123 6 2 433 5 441 0.0 601
Msa1082580 AT2G47210.1 69.161 441 123 6 2 433 5 441 0.0 601
Msa1082580 AT2G47210.2 69.161 441 123 6 2 433 5 441 0.0 601

Find 128 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATCCTTCGCGTCCATTT+AGG 0.193541 7_2:+82687252 None:intergenic
GAGAAATTGAGAGGGAAAAT+TGG 0.199779 7_2:-82687333 Msa1082580:five_prime_UTR
ATTCCCGATTCGTTGAATTT+TGG 0.213340 7_2:-82682357 Msa1082580:CDS
TTTCATTGATATCAGTCTTA+TGG 0.239001 7_2:-82680240 Msa1082580:three_prime_UTR
TATACCGATATACCTGTTTC+TGG 0.239056 7_2:+82682779 None:intergenic
CTTGCCAGGGCTGCATCTTC+CGG 0.253582 7_2:-82684630 Msa1082580:CDS
TTTCTCTTGTTGTCTTGTTT+GGG 0.260220 7_2:+82684372 None:intergenic
ATTTCTTGTGAAACATTATA+TGG 0.283878 7_2:+82684427 None:intergenic
TCGGACTGTAGAGGAGTTAA+AGG 0.299488 7_2:-82684829 Msa1082580:CDS
AGGCGAAAGGGTTAGCAAAA+AGG 0.304727 7_2:-82682230 Msa1082580:CDS
TTTGACTTCACCTTAATGAT+AGG 0.315672 7_2:+82684591 None:intergenic
TTGCCAGGGCTGCATCTTCC+GGG 0.316334 7_2:-82684629 Msa1082580:CDS
ATATCCTTCGCGTCCATTTA+GGG 0.321840 7_2:+82687253 None:intergenic
CAGATCTTTAATTCCTCATT+TGG 0.324604 7_2:-82682018 Msa1082580:exon
TGTTCCTATGAAACCCTAAA+TGG 0.331803 7_2:-82687266 Msa1082580:exon
TGCAACACATCCTATCATTA+AGG 0.347399 7_2:-82684601 Msa1082580:intron
ATGGACGCGAAGGATATTCT+TGG 0.347443 7_2:-82687247 Msa1082580:CDS
CAGTCTTATGGATAGTTATA+TGG 0.354155 7_2:-82680228 Msa1082580:three_prime_UTR
AATTTGTATAATTCCTTTCA+AGG 0.357978 7_2:-82680263 Msa1082580:three_prime_UTR
ATCATCTTTACGAGCAGAAT+TGG 0.368961 7_2:+82686565 None:intergenic
GCGTCCATTTAGGGTTTCAT+AGG 0.370836 7_2:+82687262 None:intergenic
CACAAGAAATGGAGCGAAAA+CGG 0.373448 7_2:-82684414 Msa1082580:CDS
ATATAATGTTTCACAAGAAA+TGG 0.380297 7_2:-82684425 Msa1082580:CDS
TTTAGCTACCTTGTTGTACT+TGG 0.384441 7_2:+82686395 None:intergenic
ATCAGGACTCAAAATTGAAT+TGG 0.387303 7_2:-82680017 Msa1082580:three_prime_UTR
TCTCTGTCATGCAGTGTTGC+GGG 0.388097 7_2:-82684661 Msa1082580:intron
CGAGTTACGGATGGCTTCTA+AGG 0.391035 7_2:-82684213 Msa1082580:intron
AATTGAGAAGCATCAATTGA+TGG 0.396902 7_2:+82687000 None:intergenic
ACCTCCAAAATTCAACGAAT+CGG 0.405812 7_2:+82682353 None:intergenic
CTTGTTGTCTTGTTTGGGAG+AGG 0.408483 7_2:+82684377 None:intergenic
TTTCCGACCTTTGGTGTGCC+TGG 0.419064 7_2:+82682487 None:intergenic
TTCAGCTTCGTGTATATTTG+AGG 0.419331 7_2:-82683211 Msa1082580:intron
CAAAACCTCCAAGAGTTTGA+TGG 0.421038 7_2:+82680068 None:intergenic
AGCAAACATTGCAAGATCTC+GGG 0.423802 7_2:-82683118 Msa1082580:CDS
TGCGGGCTATATTACTTGCC+AGG 0.427836 7_2:-82684644 Msa1082580:CDS
ATGATCTTCATCTTTACCAT+TGG 0.430773 7_2:-82686547 Msa1082580:CDS
TGATCTTCATCTTTACCATT+GGG 0.431644 7_2:-82686546 Msa1082580:intron
ACAAGAAATGGAGCGAAAAC+GGG 0.436669 7_2:-82684413 Msa1082580:CDS
GGTTACTGAACAGTCTCAAT+TGG 0.436817 7_2:-82683791 Msa1082580:CDS
TCCTCTACAGTCCGAGATGA+AGG 0.445335 7_2:+82684837 None:intergenic
GTCTCTGTCATGCAGTGTTG+CGG 0.447082 7_2:-82684662 Msa1082580:intron
TTGGCTGAATCTCCAGAAAC+AGG 0.448014 7_2:-82682791 Msa1082580:intron
GTCAATGGTGTTCTACCTAC+TGG 0.449074 7_2:-82686432 Msa1082580:CDS
AACTGTTGTTTCAGGCGAAA+GGG 0.457475 7_2:-82682242 Msa1082580:intron
TAATTCATTTGTCTCCTCCT+TGG 0.460992 7_2:+82684914 None:intergenic
CCTCCAAAATTCAACGAATC+GGG 0.465713 7_2:+82682354 None:intergenic
GCAGAAGGTACAACCATTTG+TGG 0.474452 7_2:+82683688 None:intergenic
GACATATGCACTCGAGCAAA+TGG 0.476593 7_2:-82683189 Msa1082580:CDS
GATAGCAGCCATCAAACTCT+TGG 0.477289 7_2:-82680076 Msa1082580:three_prime_UTR
GAATGTGCAACTTCCACAAA+TGG 0.479963 7_2:-82683701 Msa1082580:CDS
CAAACTCAACCGCTGGAGTT+CGG 0.480171 7_2:-82683157 Msa1082580:CDS
GAGCAAACATTGCAAGATCT+CGG 0.481522 7_2:-82683119 Msa1082580:CDS
GCATCAATTGATGGCATAAG+AGG 0.485257 7_2:+82687009 None:intergenic
AAACTGTTGTTTCAGGCGAA+AGG 0.485605 7_2:-82682243 Msa1082580:intron
TAAAAGACCTAGAAAACAAA+AGG 0.485836 7_2:-82682044 Msa1082580:CDS
TTTCAGGTTCGAGTAGTCAA+TGG 0.491064 7_2:-82686447 Msa1082580:intron
AAAGCCTCCTACTCATGAAA+AGG 0.495184 7_2:-82686971 Msa1082580:intron
AAAAGTTAAAAGCTTTCGCC+AGG 0.497589 7_2:+82680142 None:intergenic
GTCCCCGGAAGATGCAGCCC+TGG 0.501841 7_2:+82684626 None:intergenic
CTGGAGTTCGGACTATCAAA+CGG 0.502900 7_2:-82683145 Msa1082580:CDS
ATCACGGAACGATGAACCTT+CGG 0.506414 7_2:+82682528 None:intergenic
ACAAGAGAAAAGAGATGAAG+AGG 0.510309 7_2:-82684359 Msa1082580:intron
ACCTCGCGTGAAATGCCATC+AGG 0.515608 7_2:+82687151 None:intergenic
CAAGCTTCAAACTCAACCGC+TGG 0.519312 7_2:-82683164 Msa1082580:CDS
ATAGTATAACGTCGAAGCAT+CGG 0.523598 7_2:-82687372 Msa1082580:five_prime_UTR
GCGAAAACGGGCACTTTCCA+TGG 0.524771 7_2:-82684401 Msa1082580:CDS
ACTTTGTTTGTATAGGGGCA+TGG 0.528506 7_2:-82682088 Msa1082580:intron
TGGAGTTCGGACTATCAAAC+GGG 0.529952 7_2:-82683144 Msa1082580:CDS
AAAACCTTTCAATTCAATTG+GGG 0.534916 7_2:+82687293 None:intergenic
GTTACAGAGAGGGCTGTCCT+TGG 0.541430 7_2:-82683742 Msa1082580:CDS
GAGAGGGAAAATTGGAGCGG+AGG 0.541807 7_2:-82687325 Msa1082580:five_prime_UTR
CGAACAGTTGAGAAATTGAG+AGG 0.542121 7_2:-82687342 Msa1082580:five_prime_UTR
GATATCAATGAAACCTTGAA+AGG 0.544542 7_2:+82680250 None:intergenic
TACTCTAGCTTCTCTCCGCA+TGG 0.547011 7_2:-82683653 Msa1082580:intron
TTAAAGGATCGATATTATAG+TGG 0.547811 7_2:-82684813 Msa1082580:intron
CTTATGGATAGTTATATGGA+AGG 0.554718 7_2:-82680224 Msa1082580:three_prime_UTR
CTTAGAAGCCATCCGTAACT+CGG 0.558886 7_2:+82684214 None:intergenic
TGTGGAAGTTGCACATTCGA+AGG 0.559456 7_2:+82683706 None:intergenic
TAAGAAGAGAAATACTAACT+TGG 0.560571 7_2:-82682810 Msa1082580:CDS
TTTCTCTGAGATTCTTTGGG+AGG 0.563303 7_2:+82687175 None:intergenic
CCAGGTCAATTTGAAACCGA+GGG 0.563342 7_2:-82682869 Msa1082580:intron
TAGGTTTATGCACTTACTGG+TGG 0.564499 7_2:-82687039 Msa1082580:CDS
GAAGGTTCATCGTTCCGTGA+TGG 0.565283 7_2:-82682526 Msa1082580:CDS
AGCAGCCATCAAACTCTTGG+AGG 0.567278 7_2:-82680073 Msa1082580:three_prime_UTR
TGCCAGGGCTGCATCTTCCG+GGG 0.572929 7_2:-82684628 Msa1082580:CDS
TCCAGGTCAATTTGAAACCG+AGG 0.576584 7_2:-82682870 Msa1082580:intron
CCCTTCATCTCGGACTGTAG+AGG 0.579136 7_2:-82684838 Msa1082580:CDS
CTGATAGGTTCCCTTCATCT+CGG 0.580785 7_2:-82684848 Msa1082580:CDS
TATCAGCTATCACAACAAAA+CGG 0.581125 7_2:+82684865 None:intergenic
TTACGAGCAGAATTGGTGAA+AGG 0.585208 7_2:+82686572 None:intergenic
GATGAGAATTATGAATGTTG+TGG 0.587741 7_2:-82680098 Msa1082580:three_prime_UTR
ACCTGATGGCATTTCACGCG+AGG 0.587818 7_2:-82687152 Msa1082580:intron
GCGGGCTATATTACTTGCCA+GGG 0.590495 7_2:-82684643 Msa1082580:CDS
TCTTGTTTGGGAGAGGACCA+TGG 0.591121 7_2:+82684384 None:intergenic
AGTGTCGTCTGTGCCAAATG+AGG 0.594164 7_2:+82682005 None:intergenic
GTAGAGGCATTATCTGCAGA+AGG 0.598351 7_2:+82683673 None:intergenic
TGTGCCTGGTGTTTCACCGT+AGG 0.598536 7_2:+82682501 None:intergenic
GGATCCTACGGTGAAACACC+AGG 0.600080 7_2:-82682505 Msa1082580:CDS
GTGGCAGGTGCAATATAAAG+AGG 0.600841 7_2:-82682551 Msa1082580:intron
TCGTTCCGTGATGGATCCTA+CGG 0.603828 7_2:-82682517 Msa1082580:CDS
GAAACCCTAAATGGACGCGA+AGG 0.605606 7_2:-82687257 Msa1082580:exon
TTTGATAGTCCGAACTCCAG+CGG 0.617390 7_2:+82683148 None:intergenic
TCATTTGGCACAGACGACAC+TGG 0.618033 7_2:-82682003 Msa1082580:intron
AAGAATAGCCGAGTTACGGA+TGG 0.620429 7_2:-82684222 Msa1082580:CDS
GAACAGTTGAGAAATTGAGA+GGG 0.620892 7_2:-82687341 Msa1082580:five_prime_UTR
CCTCTACAGTCCGAGATGAA+GGG 0.625501 7_2:+82684838 None:intergenic
GCAAAAGAATAGTCTCCAGT+AGG 0.625902 7_2:+82686417 None:intergenic
AATGAGGAATTAAAGATCTG+AGG 0.626891 7_2:+82682021 None:intergenic
ACGAATCGGGAATAAATGTA+CGG 0.628215 7_2:+82682367 None:intergenic
TCAATTGATGGCATAAGAGG+TGG 0.628674 7_2:+82687012 None:intergenic
AATTATTTGATTTGTGTGAG+AGG 0.630139 7_2:-82684896 Msa1082580:CDS
CTGTCAGGTGCAATGTGGAA+AGG 0.631174 7_2:-82680292 Msa1082580:intron
GCGGAGAGAAGCTAGAGTAG+AGG 0.632330 7_2:+82683657 None:intergenic
ATTGAGAGGGAAAATTGGAG+CGG 0.634070 7_2:-82687328 Msa1082580:five_prime_UTR
GAATCTCAGAGAAAACCTGA+TGG 0.650054 7_2:-82687166 Msa1082580:CDS
GCAAACATTGCAAGATCTCG+GGG 0.655130 7_2:-82683117 Msa1082580:intron
AGGATGTGTTGCAATGTCCC+CGG 0.656289 7_2:+82684611 None:intergenic
TGAAACACCAGGCACACCAA+AGG 0.660161 7_2:-82682494 Msa1082580:intron
TGATGCAGAAGTTACAGAGA+GGG 0.665773 7_2:-82683752 Msa1082580:CDS
GTGCAATATAAAGAGGCCGA+AGG 0.666909 7_2:-82682544 Msa1082580:CDS
GTATAACGTCGAAGCATCGG+AGG 0.667484 7_2:-82687369 Msa1082580:five_prime_UTR
ATCTACCTAGACATGGACCA+AGG 0.680479 7_2:-82684931 Msa1082580:intron
CATTATCAAATACACAGACG+AGG 0.699236 7_2:-82686280 Msa1082580:CDS
GTTATCTGTCAGGTGCAATG+TGG 0.709467 7_2:-82680297 Msa1082580:intron
AAGGAGATATAGTTTCACCA+AGG 0.710641 7_2:+82683725 None:intergenic
TTTCACCGTAGGATCCATCA+CGG 0.718802 7_2:+82682512 None:intergenic
CTGATGCAGAAGTTACAGAG+AGG 0.722734 7_2:-82683753 Msa1082580:CDS
TACCTAGACATGGACCAAGG+AGG 0.755265 7_2:-82684928 Msa1082580:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGAATTGTATTATTTTT+AGG - chr7_2:82680327-82680346 Msa1082580:intron 10.0%
!! TAATTAAATCAAAGAAATTT+GGG + chr7_2:82684799-82684818 None:intergenic 10.0%
!!! TTCATATTTTTATTTCTTTT+TGG - chr7_2:82684921-82684940 Msa1082580:CDS 10.0%
!! AAAACAAAATTAAAAAAACA+AGG - chr7_2:82685884-82685903 Msa1082580:intron 10.0%
!! ACATAAAATAAATTTCAGTT+CGG + chr7_2:82681244-82681263 None:intergenic 15.0%
!!! AAAACTTAAAATTTGTTCAT+TGG - chr7_2:82681353-82681372 Msa1082580:intron 15.0%
!! GTAAAATTAAATGAGAAATT+TGG + chr7_2:82681680-82681699 None:intergenic 15.0%
!! ACTATTAAATAAATATATGC+TGG + chr7_2:82681738-82681757 None:intergenic 15.0%
!! TATATGATATATTGTACAAT+GGG + chr7_2:82682293-82682312 None:intergenic 15.0%
!!! GTATTATTTTTTTTCTTTGA+AGG + chr7_2:82683058-82683077 None:intergenic 15.0%
!!! ACTTATATTTTTTATTTTGC+AGG - chr7_2:82683124-82683143 Msa1082580:CDS 15.0%
!!! TGTTTTATAATTACCAATTT+GGG - chr7_2:82683481-82683500 Msa1082580:intron 15.0%
!!! ATTGATTTTATACATTTTTC+AGG - chr7_2:82683573-82683592 Msa1082580:intron 15.0%
!!! ATTTGATATTTCGTTATTTT+GGG + chr7_2:82683821-82683840 None:intergenic 15.0%
!!! AATTTGATATTTCGTTATTT+TGG + chr7_2:82683822-82683841 None:intergenic 15.0%
!!! TCAAATAATTTTTTTTAACG+AGG - chr7_2:82684089-82684108 Msa1082580:intron 15.0%
!!! CAAATAATTTTTTTTAACGA+GGG - chr7_2:82684090-82684109 Msa1082580:intron 15.0%
!!! AAATAATTTTTTTTAACGAG+GGG - chr7_2:82684091-82684110 Msa1082580:intron 15.0%
!! AATTAAATCAAAGAAATTTG+GGG + chr7_2:82684798-82684817 None:intergenic 15.0%
!! GTAATTAAATCAAAGAAATT+TGG + chr7_2:82684800-82684819 None:intergenic 15.0%
!! TTCTAAATTTCTATAAAGTA+AGG - chr7_2:82685084-82685103 Msa1082580:intron 15.0%
!! TCTAAATTTCTATAAAGTAA+GGG - chr7_2:82685085-82685104 Msa1082580:intron 15.0%
!! TATGTTTAATGATAAATAGA+CGG + chr7_2:82685116-82685135 None:intergenic 15.0%
!! GTAATAGTACATTATTAAAA+TGG + chr7_2:82685262-82685281 None:intergenic 15.0%
!!! TTTTAATAATGTACTATTAC+TGG - chr7_2:82685262-82685281 Msa1082580:intron 15.0%
!! TCATATTTAATTAGGTTAAA+TGG - chr7_2:82685421-82685440 Msa1082580:intron 15.0%
!!! TTTAATTTTGTTTTTGAACA+GGG + chr7_2:82685878-82685897 None:intergenic 15.0%
!!! TTTTAATTTTGTTTTTGAAC+AGG + chr7_2:82685879-82685898 None:intergenic 15.0%
!! AAAAACCTTTCAATTCAATT+GGG + chr7_2:82680096-82680115 None:intergenic 20.0%
!!! TTTTTATTATCAAGAGAAGA+TGG + chr7_2:82680183-82680202 None:intergenic 20.0%
!! AAAGAATGAATAAAGTGAAT+CGG + chr7_2:82680286-82680305 None:intergenic 20.0%
!!! TACTATAGCTTTTATGAAAT+CGG - chr7_2:82680671-82680690 Msa1082580:intron 20.0%
!! GATTAAGATTATTATCCAAA+CGG - chr7_2:82680754-82680773 Msa1082580:intron 20.0%
!! ATTAAGATTATTATCCAAAC+GGG - chr7_2:82680755-82680774 Msa1082580:intron 20.0%
!! AATCACAGATAATAAACAAT+CGG + chr7_2:82680878-82680897 None:intergenic 20.0%
!!! TACAGTTTTTTGGAAATTTA+TGG - chr7_2:82681175-82681194 Msa1082580:intron 20.0%
!! CTTTACTCAATAATTTATCA+CGG - chr7_2:82681504-82681523 Msa1082580:intron 20.0%
!!! GATTAATATACAATTTTGTG+TGG - chr7_2:82681561-82681580 Msa1082580:intron 20.0%
!!! TATGTATTTTAATACCCTAT+AGG + chr7_2:82681769-82681788 None:intergenic 20.0%
!!! TTTTTTTAAAGCTTCCAAAT+TGG - chr7_2:82681974-82681993 Msa1082580:intron 20.0%
!!! TTTTTTAAAGCTTCCAAATT+GGG - chr7_2:82681975-82681994 Msa1082580:intron 20.0%
!! AGTTTAGACATAAAAAATGA+GGG - chr7_2:82682199-82682218 Msa1082580:intron 20.0%
!! GCAATCAATTTATATATCAA+TGG - chr7_2:82682229-82682248 Msa1082580:CDS 20.0%
!! ATATGATATATTGTACAATG+GGG + chr7_2:82682292-82682311 None:intergenic 20.0%
!! GTATATGATATATTGTACAA+TGG + chr7_2:82682294-82682313 None:intergenic 20.0%
!! TTAACAAATGCAATTAAAAC+AGG + chr7_2:82682323-82682342 None:intergenic 20.0%
!! TGAGTTAAATGATATGAATT+GGG + chr7_2:82682634-82682653 None:intergenic 20.0%
!! TTGAGTTAAATGATATGAAT+TGG + chr7_2:82682635-82682654 None:intergenic 20.0%
!! ATTTCTTGTGAAACATTATA+TGG + chr7_2:82682961-82682980 None:intergenic 20.0%
!! ATATAATGTTTCACAAGAAA+TGG - chr7_2:82682960-82682979 Msa1082580:intron 20.0%
!!! CAAATTGGTAATTATAAAAC+AGG + chr7_2:82683482-82683501 None:intergenic 20.0%
!!! CTGTTTTATAATTACCAATT+TGG - chr7_2:82683480-82683499 Msa1082580:intron 20.0%
!!! GTTTTATAATTACCAATTTG+GGG - chr7_2:82683482-82683501 Msa1082580:intron 20.0%
!!! TAACTTAAAACTTCATTTTG+TGG - chr7_2:82684006-82684025 Msa1082580:intron 20.0%
!! ATTAAGAAAGATGGTTAATT+TGG + chr7_2:82684377-82684396 None:intergenic 20.0%
!! ATTAAATCAAAGAAATTTGG+GGG + chr7_2:82684797-82684816 None:intergenic 20.0%
!!! ATTACTTGTTATGATATATG+TGG - chr7_2:82684815-82684834 Msa1082580:CDS 20.0%
!! TTTATAGAAATTTAGAAAGC+AGG + chr7_2:82685081-82685100 None:intergenic 20.0%
!! TAATTAGACAAAATACGTTA+TGG + chr7_2:82685200-82685219 None:intergenic 20.0%
!! ATGTAAAACTAATCAATTGA+CGG + chr7_2:82685228-82685247 None:intergenic 20.0%
!!! ATTAGTTTTACATCTACTTT+TGG - chr7_2:82685235-82685254 Msa1082580:intron 20.0%
!! GTTAAGCATCATATTTAATT+AGG - chr7_2:82685413-82685432 Msa1082580:intron 20.0%
!! GGAATCTATAAAAAATACAA+GGG + chr7_2:82685486-82685505 None:intergenic 20.0%
!! TGGAATCTATAAAAAATACA+AGG + chr7_2:82685487-82685506 None:intergenic 20.0%
!! ATAAGAATCTTCAAATGATA+AGG + chr7_2:82685511-82685530 None:intergenic 20.0%
!! GGAAAATAAAAATAAGTGTT+TGG + chr7_2:82685642-82685661 None:intergenic 20.0%
!!! CGGTTTTTTTTTTTAGTTTA+TGG + chr7_2:82685788-82685807 None:intergenic 20.0%
!! AGAATAAGTATGATAAGATT+CGG + chr7_2:82685808-82685827 None:intergenic 20.0%
!!! TTAATTTTGTTTTTGAACAG+GGG + chr7_2:82685877-82685896 None:intergenic 20.0%
!!! TTTAAAGAGTATCAAAGTAT+GGG + chr7_2:82685940-82685959 None:intergenic 20.0%
!!! TTTTAAAGAGTATCAAAGTA+TGG + chr7_2:82685941-82685960 None:intergenic 20.0%
!! AAGATTTGATCAATACATAA+GGG + chr7_2:82686012-82686031 None:intergenic 20.0%
!!! TTTTTGGATTTGAAAATTCT+GGG - chr7_2:82686569-82686588 Msa1082580:CDS 20.0%
!!! TTTGGATGAAAATTTAAGTT+GGG - chr7_2:82686662-82686681 Msa1082580:intron 20.0%
!! ACATAATTATAAATTCATCC+AGG + chr7_2:82686708-82686727 None:intergenic 20.0%
!! CTTATATTTGTACAATAAGA+TGG - chr7_2:82686856-82686875 Msa1082580:intron 20.0%
!! AATTTGTATAATTCCTTTCA+AGG - chr7_2:82687122-82687141 Msa1082580:intron 20.0%
! AAAACCTTTCAATTCAATTG+GGG + chr7_2:82680095-82680114 None:intergenic 25.0%
! CAAAAACCTTTCAATTCAAT+TGG + chr7_2:82680097-82680116 None:intergenic 25.0%
!! CAATTGAATTGAAAGGTTTT+TGG - chr7_2:82680095-82680114 Msa1082580:three_prime_UTR 25.0%
! AATAAGCAGAAAACAACTTA+TGG + chr7_2:82680516-82680535 None:intergenic 25.0%
! AGCACTTATAAGTTTATCTA+TGG - chr7_2:82680542-82680561 Msa1082580:intron 25.0%
!! TAGTTTTCATAAGCTATCAT+GGG + chr7_2:82680653-82680672 None:intergenic 25.0%
! TTAAGATTATTATCCAAACG+GGG - chr7_2:82680756-82680775 Msa1082580:intron 25.0%
!!! ATTATGTTTTTCAGGTTACT+TGG - chr7_2:82680781-82680800 Msa1082580:intron 25.0%
! TCTGTGATTATTTATAAGCA+TGG - chr7_2:82680889-82680908 Msa1082580:intron 25.0%
! CCAAAAATATAGCAATGAAT+AGG + chr7_2:82681043-82681062 None:intergenic 25.0%
!! CCTATTCATTGCTATATTTT+TGG - chr7_2:82681040-82681059 Msa1082580:intron 25.0%
!!! TGTCTAATTGTACAGTTTTT+TGG - chr7_2:82681165-82681184 Msa1082580:intron 25.0%
! AAGCTTATAACTAATACAAC+TGG - chr7_2:82681391-82681410 Msa1082580:intron 25.0%
! ATATTGGATTATTCTTGTGT+TGG - chr7_2:82681437-82681456 Msa1082580:intron 25.0%
! TGAGTAAAGAAAAAACTTCA+AGG + chr7_2:82681493-82681512 None:intergenic 25.0%
!! TAATAGTCAGATTTTCCTAT+AGG - chr7_2:82681751-82681770 Msa1082580:intron 25.0%
!! AATAGTCAGATTTTCCTATA+GGG - chr7_2:82681752-82681771 Msa1082580:intron 25.0%
! AAAGATGTACATGTAATTAG+AGG + chr7_2:82681888-82681907 None:intergenic 25.0%
! TCTAATTACATGTACATCTT+TGG - chr7_2:82681887-82681906 Msa1082580:intron 25.0%
! TTAAAAAAAATCCTGTCCTT+TGG - chr7_2:82682082-82682101 Msa1082580:intron 25.0%
! ATAATAGTTCTTCCTTACTT+TGG - chr7_2:82682139-82682158 Msa1082580:intron 25.0%
! CAGTTTAGACATAAAAAATG+AGG - chr7_2:82682198-82682217 Msa1082580:intron 25.0%
! AATTTATATATCAATGGACC+TGG - chr7_2:82682235-82682254 Msa1082580:intron 25.0%
! ATATTAATGCATTGAACACT+TGG + chr7_2:82682419-82682438 None:intergenic 25.0%
!!! AATTATTTGATTTGTGTGAG+AGG - chr7_2:82682489-82682508 Msa1082580:intron 25.0%
! TTAAAGGATCGATATTATAG+TGG - chr7_2:82682572-82682591 Msa1082580:intron 25.0%
! GAGTTAAATGATATGAATTG+GGG + chr7_2:82682633-82682652 None:intergenic 25.0%
! AACTTTCAATTCTGATGATA+TGG - chr7_2:82682654-82682673 Msa1082580:intron 25.0%
! TAATATTCAAAGTGATGAGT+AGG + chr7_2:82683315-82683334 None:intergenic 25.0%
! TACTCATCACTTTGAATATT+AGG - chr7_2:82683314-82683333 Msa1082580:intron 25.0%
! ACTCATCACTTTGAATATTA+GGG - chr7_2:82683315-82683334 Msa1082580:intron 25.0%
! ATGTATAAAATCAATATCCC+AGG + chr7_2:82683568-82683587 None:intergenic 25.0%
! TACAATTTCAGAACACAAAA+TGG + chr7_2:82683778-82683797 None:intergenic 25.0%
!!! AATTTTGAAGATCAGAATTC+TGG + chr7_2:82684044-82684063 None:intergenic 25.0%
!!! CTTTCTTTCTAAAACATTGT+TGG - chr7_2:82684333-82684352 Msa1082580:intron 25.0%
!! TCGTTACAAACATTTCATTT+TGG + chr7_2:82684451-82684470 None:intergenic 25.0%
! TAAGAAGAGAAATACTAACT+TGG - chr7_2:82684575-82684594 Msa1082580:intron 25.0%
!!! TTCACTTGTTAGAATTTTCA+TGG - chr7_2:82684696-82684715 Msa1082580:intron 25.0%
!!! TCACTTGTTAGAATTTTCAT+GGG - chr7_2:82684697-82684716 Msa1082580:intron 25.0%
! TAAACAATCATACATTAGAC+AGG + chr7_2:82684734-82684753 None:intergenic 25.0%
! TTAAATCAAAGAAATTTGGG+GGG + chr7_2:82684796-82684815 None:intergenic 25.0%
!!! ATCTATAAAACTGTTGTTTC+AGG - chr7_2:82685135-82685154 Msa1082580:intron 25.0%
! TGTAAAACTAATCAATTGAC+GGG + chr7_2:82685227-82685246 None:intergenic 25.0%
! AATAATGTACTATTACTGGT+TGG - chr7_2:82685266-82685285 Msa1082580:intron 25.0%
! TAAAAGACCTAGAAAACAAA+AGG - chr7_2:82685341-82685360 Msa1082580:intron 25.0%
!! TTTGGTAATTTAAATACAGG+TGG + chr7_2:82685624-82685643 None:intergenic 25.0%
!! GTGTTTGGTAATTTAAATAC+AGG + chr7_2:82685627-82685646 None:intergenic 25.0%
!! TATGAGTTTTTGCATTTTCT+GGG + chr7_2:82685713-82685732 None:intergenic 25.0%
!! ATATGAGTTTTTGCATTTTC+TGG + chr7_2:82685714-82685733 None:intergenic 25.0%
!! GGATTTTCGAATGAATTTTT+GGG + chr7_2:82685767-82685786 None:intergenic 25.0%
!! TGGATTTTCGAATGAATTTT+TGG + chr7_2:82685768-82685787 None:intergenic 25.0%
! GAAGATTTGATCAATACATA+AGG + chr7_2:82686013-82686032 None:intergenic 25.0%
!!! ACTCTGTTGATTTTTTTAAG+AGG - chr7_2:82686138-82686157 Msa1082580:intron 25.0%
!!! TGTTGATTTTTTTAAGAGGA+TGG - chr7_2:82686142-82686161 Msa1082580:intron 25.0%
!!! TTGAATATCATTTTCTGAAG+AGG - chr7_2:82686166-82686185 Msa1082580:intron 25.0%
!!! GTTTGATGAGTTTTTTAAAG+AGG - chr7_2:82686276-82686295 Msa1082580:CDS 25.0%
!!! GTTTTTGGATTTGAAAATTC+TGG - chr7_2:82686568-82686587 Msa1082580:CDS 25.0%
! GTTTGGATGAAAATTTAAGT+TGG - chr7_2:82686661-82686680 Msa1082580:intron 25.0%
! TTCAATAAAAGAATTCCAGA+CGG - chr7_2:82686764-82686783 Msa1082580:intron 25.0%
! AATGTGTAAAATTGATGAGT+TGG + chr7_2:82686821-82686840 None:intergenic 25.0%
!!! CTTGTAACATCAAGATTTTT+TGG + chr7_2:82686897-82686916 None:intergenic 25.0%
! CAAAAAATCTTGATGTTACA+AGG - chr7_2:82686895-82686914 Msa1082580:intron 25.0%
! CTATAAAGTTAAAGCATGTA+GGG + chr7_2:82687008-82687027 None:intergenic 25.0%
!! TTGAATTTAAAGCTTGTCAA+TGG - chr7_2:82687038-82687057 Msa1082580:CDS 25.0%
! TTTCATTGATATCAGTCTTA+TGG - chr7_2:82687145-82687164 Msa1082580:intron 25.0%
!!! TTAGCCTATGTTTTAAAATC+AGG - chr7_2:82687351-82687370 Msa1082580:five_prime_UTR 25.0%
! TTTTCCCCAATTGAATTGAA+AGG - chr7_2:82680088-82680107 Msa1082580:three_prime_UTR 30.0%
!!! TTTTAGGTTTATGCACTTAC+TGG - chr7_2:82680343-82680362 Msa1082580:intron 30.0%
!! AATTGAGAAGCATCAATTGA+TGG + chr7_2:82680388-82680407 None:intergenic 30.0%
! AAAAGAACCTTTTCATGAGT+AGG + chr7_2:82680424-82680443 None:intergenic 30.0%
! AGTTTTCATAAGCTATCATG+GGG + chr7_2:82680652-82680671 None:intergenic 30.0%
! GTAGTTTTCATAAGCTATCA+TGG + chr7_2:82680654-82680673 None:intergenic 30.0%
AAAAACATAATTACCCCGTT+TGG + chr7_2:82680772-82680791 None:intergenic 30.0%
ATGATCTTCATCTTTACCAT+TGG - chr7_2:82680838-82680857 Msa1082580:intron 30.0%
TGATCTTCATCTTTACCATT+GGG - chr7_2:82680839-82680858 Msa1082580:intron 30.0%
!!! TTATGTGTCACTTCTTTTTC+AGG - chr7_2:82680922-82680941 Msa1082580:intron 30.0%
!! TTCATTGACTTGTATTGCAA+GGG - chr7_2:82681291-82681310 Msa1082580:intron 30.0%
AATAATCCAATATCCTTCAG+CGG + chr7_2:82681430-82681449 None:intergenic 30.0%
TAATAAGAACAACCTAAAGC+TGG - chr7_2:82681461-82681480 Msa1082580:intron 30.0%
ACCTTGTATTTACCATAGTT+TGG - chr7_2:82681844-82681863 Msa1082580:intron 30.0%
CCTTGTATTTACCATAGTTT+GGG - chr7_2:82681845-82681864 Msa1082580:intron 30.0%
GTACATGTAATTAGAGGAAA+AGG + chr7_2:82681882-82681901 None:intergenic 30.0%
! AACCTTATGGATGGAAATTT+TGG - chr7_2:82682116-82682135 Msa1082580:intron 30.0%
ATCCAAAATTTCCATCCATA+AGG + chr7_2:82682121-82682140 None:intergenic 30.0%
ATCATCATGATACCAAAGTA+AGG + chr7_2:82682154-82682173 None:intergenic 30.0%
TACTTTGGTATCATGATGAT+AGG - chr7_2:82682154-82682173 Msa1082580:intron 30.0%
TATCAGCTATCACAACAAAA+CGG + chr7_2:82682523-82682542 None:intergenic 30.0%
! TTTGACTTCACCTTAATGAT+AGG + chr7_2:82682797-82682816 None:intergenic 30.0%
AACAGCAAATGTATACTAAG+AGG + chr7_2:82682864-82682883 None:intergenic 30.0%
! TCGTTTTCTCTTTTCAATGT+AGG - chr7_2:82682933-82682952 Msa1082580:intron 30.0%
!! TTTCTCTTGTTGTCTTGTTT+GGG + chr7_2:82683016-82683035 None:intergenic 30.0%
!! TTTTCTCTTGTTGTCTTGTT+TGG + chr7_2:82683017-82683036 None:intergenic 30.0%
GTATACGTCATTTACTATGA+GGG + chr7_2:82683106-82683125 None:intergenic 30.0%
AGTATACGTCATTTACTATG+AGG + chr7_2:82683107-82683126 None:intergenic 30.0%
TACTCAAATAACATACCATG+CGG + chr7_2:82683750-82683769 None:intergenic 30.0%
CATTATGAAAATTGTGCCTA+GGG + chr7_2:82683932-82683951 None:intergenic 30.0%
ACATTATGAAAATTGTGCCT+AGG + chr7_2:82683933-82683952 None:intergenic 30.0%
TACTTCATAGCATTATCTGA+TGG - chr7_2:82684141-82684160 Msa1082580:intron 30.0%
CATTAAAAGTTAAGGTAGTC+GGG + chr7_2:82684299-82684318 None:intergenic 30.0%
GCATTAAAAGTTAAGGTAGT+CGG + chr7_2:82684300-82684319 None:intergenic 30.0%
GTAAGCTGCATTAAAAGTTA+AGG + chr7_2:82684307-82684326 None:intergenic 30.0%
TTAATGCCCATGTATTAGAT+AGG - chr7_2:82684392-82684411 Msa1082580:CDS 30.0%
TACTCTCCTATCTAATACAT+GGG + chr7_2:82684401-82684420 None:intergenic 30.0%
ATACTCTCCTATCTAATACA+TGG + chr7_2:82684402-82684421 None:intergenic 30.0%
TTGAGTTTGACCATATGTTT+GGG - chr7_2:82684472-82684491 Msa1082580:intron 30.0%
AAATATGAATTTCCGACCTT+TGG + chr7_2:82684910-82684929 None:intergenic 30.0%
! TTGGGAACTTTGTTTGTATA+GGG - chr7_2:82685291-82685310 Msa1082580:intron 30.0%
AATGAGGAATTAAAGATCTG+AGG + chr7_2:82685367-82685386 None:intergenic 30.0%
CAGATCTTTAATTCCTCATT+TGG - chr7_2:82685367-82685386 Msa1082580:intron 30.0%
GAATCTTCAAATGATAAGGT+TGG + chr7_2:82685507-82685526 None:intergenic 30.0%
ATTTGATCAATACATAAGGG+TGG + chr7_2:82686009-82686028 None:intergenic 30.0%
!! AATATCATTTTCTGAAGAGG+AGG - chr7_2:82686169-82686188 Msa1082580:intron 30.0%
!! ATATCATTTTCTGAAGAGGA+GGG - chr7_2:82686170-82686189 Msa1082580:intron 30.0%
!! TCTGAAATCGTTTTCTTTTC+TGG - chr7_2:82686203-82686222 Msa1082580:intron 30.0%
! CTGAAATCGTTTTCTTTTCT+GGG - chr7_2:82686204-82686223 Msa1082580:intron 30.0%
AGGAAATTAAAGAGAGAACA+AGG - chr7_2:82686296-82686315 Msa1082580:intron 30.0%
AAAGGGAAGAGTGAAAAATA+AGG - chr7_2:82686366-82686385 Msa1082580:intron 30.0%
AAGGGAAGAGTGAAAAATAA+GGG - chr7_2:82686367-82686386 Msa1082580:intron 30.0%
TCCAAAAACTCTCACTTTAT+TGG + chr7_2:82686557-82686576 None:intergenic 30.0%
TTTGGATGAAGTTTATTGGA+TGG - chr7_2:82686592-82686611 Msa1082580:CDS 30.0%
!! TTATTGGATGGATTTGTTGA+TGG - chr7_2:82686604-82686623 Msa1082580:intron 30.0%
!! TATTGGATGGATTTGTTGAT+GGG - chr7_2:82686605-82686624 Msa1082580:intron 30.0%
TGATGTTGGATGATGTTTAT+TGG - chr7_2:82686634-82686653 Msa1082580:intron 30.0%
TTGGATGATGTTTATTGGAT+GGG - chr7_2:82686639-82686658 Msa1082580:intron 30.0%
!!! TCCAGACGGAATAATTTTTT+TGG - chr7_2:82686778-82686797 Msa1082580:intron 30.0%
TCCAAAAAAATTATTCCGTC+TGG + chr7_2:82686782-82686801 None:intergenic 30.0%
TGTACAAATATAAGCTGACA+TGG + chr7_2:82686850-82686869 None:intergenic 30.0%
AAATCTTGATGTTACAAGGT+TGG - chr7_2:82686899-82686918 Msa1082580:intron 30.0%
CCTATAAAGTTAAAGCATGT+AGG + chr7_2:82687009-82687028 None:intergenic 30.0%
! CCTACATGCTTTAACTTTAT+AGG - chr7_2:82687006-82687025 Msa1082580:CDS 30.0%
GATATCAATGAAACCTTGAA+AGG + chr7_2:82687138-82687157 None:intergenic 30.0%
! CAGTCTTATGGATAGTTATA+TGG - chr7_2:82687157-82687176 Msa1082580:CDS 30.0%
CTTATGGATAGTTATATGGA+AGG - chr7_2:82687161-82687180 Msa1082580:CDS 30.0%
GATGAGAATTATGAATGTTG+TGG - chr7_2:82687287-82687306 Msa1082580:five_prime_UTR 30.0%
!!! GAGTCCTGATTTTAAAACAT+AGG + chr7_2:82687358-82687377 None:intergenic 30.0%
ATCAGGACTCAAAATTGAAT+TGG - chr7_2:82687368-82687387 Msa1082580:five_prime_UTR 30.0%
! TTGAATTGGTGAGACTTTTT+AGG - chr7_2:82687382-82687401 Msa1082580:five_prime_UTR 30.0%
ATAGTATAACGTCGAAGCAT+CGG - chr7_2:82680013-82680032 Msa1082580:three_prime_UTR 35.0%
GAACAGTTGAGAAATTGAGA+GGG - chr7_2:82680044-82680063 Msa1082580:three_prime_UTR 35.0%
GAGAAATTGAGAGGGAAAAT+TGG - chr7_2:82680052-82680071 Msa1082580:three_prime_UTR 35.0%
TGTTCCTATGAAACCCTAAA+TGG - chr7_2:82680119-82680138 Msa1082580:three_prime_UTR 35.0%
!!! GGTTTTCTCTGAGATTCTTT+GGG + chr7_2:82680216-82680235 None:intergenic 35.0%
!!! AGGTTTTCTCTGAGATTCTT+TGG + chr7_2:82680217-82680236 None:intergenic 35.0%
! ACGGGGTAATTATGTTTTTC+AGG - chr7_2:82680773-82680792 Msa1082580:intron 35.0%
!!! TTTTTCAGGTTACTTGGCAA+TGG - chr7_2:82680787-82680806 Msa1082580:intron 35.0%
ATCATCTTTACGAGCAGAAT+TGG + chr7_2:82680823-82680842 None:intergenic 35.0%
! TTCTTTTGCCAAGTACAACA+AGG - chr7_2:82680982-82681001 Msa1082580:intron 35.0%
! TTTAGCTACCTTGTTGTACT+TGG + chr7_2:82680993-82681012 None:intergenic 35.0%
CATTATCAAATACACAGACG+AGG - chr7_2:82681105-82681124 Msa1082580:intron 35.0%
! AAAGTATTTGACAGATCCTG+TGG - chr7_2:82681135-82681154 Msa1082580:intron 35.0%
AAGTATTTGACAGATCCTGT+GGG - chr7_2:82681136-82681155 Msa1082580:intron 35.0%
AATTAGACATGATTACCCAC+AGG + chr7_2:82681154-82681173 None:intergenic 35.0%
CTTGCAATACAAGTCAATGA+AGG + chr7_2:82681292-82681311 None:intergenic 35.0%
!! CTTCATTGACTTGTATTGCA+AGG - chr7_2:82681290-82681309 Msa1082580:intron 35.0%
AAGTAGAGTTTAGTGTGATG+TGG - chr7_2:82681538-82681557 Msa1082580:intron 35.0%
AGTAGAGTTTAGTGTGATGT+GGG - chr7_2:82681539-82681558 Msa1082580:intron 35.0%
TGATTGATATGATTCTGCTC+AGG + chr7_2:82681623-82681642 None:intergenic 35.0%
!! TCACAACTCTGCTTTAGTTT+TGG - chr7_2:82681640-82681659 Msa1082580:intron 35.0%
CCCAAACTATGGTAAATACA+AGG + chr7_2:82681848-82681867 None:intergenic 35.0%
! TGATTTGTAGAGCCACATTA+AGG - chr7_2:82681939-82681958 Msa1082580:intron 35.0%
TCCAACATGTTTCCTTAATG+TGG + chr7_2:82681954-82681973 None:intergenic 35.0%
TAAAAAGAAGAATCCCCTCA+CGG + chr7_2:82682065-82682084 None:intergenic 35.0%
AAAAATCCTGTCCTTTGGAT+CGG - chr7_2:82682087-82682106 Msa1082580:intron 35.0%
TAGGTAGATAAAGCAGAATC+AGG + chr7_2:82682443-82682462 None:intergenic 35.0%
TAATTCATTTGTCTCCTCCT+TGG + chr7_2:82682474-82682493 None:intergenic 35.0%
!! GTTTTGTTGTGATAGCTGAT+AGG - chr7_2:82682522-82682541 Msa1082580:CDS 35.0%
TGCAACACATCCTATCATTA+AGG - chr7_2:82682784-82682803 Msa1082580:intron 35.0%
ACAAGAGAAAAGAGATGAAG+AGG - chr7_2:82683026-82683045 Msa1082580:intron 35.0%
ACTTCATACATTTCTGCCAT+CGG - chr7_2:82683076-82683095 Msa1082580:intron 35.0%
CAAAAAGAATAGCCGAGTTA+CGG - chr7_2:82683159-82683178 Msa1082580:CDS 35.0%
! TACCAATACACCATTAGCTT+AGG - chr7_2:82683215-82683234 Msa1082580:intron 35.0%
GATAACAACTCCTAAGCTAA+TGG + chr7_2:82683228-82683247 None:intergenic 35.0%
GGAGTTGTTATCAAGATTCA+AGG - chr7_2:82683236-82683255 Msa1082580:intron 35.0%
! CAAATTTTGTTGCCCCAAAT+TGG + chr7_2:82683497-82683516 None:intergenic 35.0%
! ATTTGGGGCAACAAAATTTG+TGG - chr7_2:82683497-82683516 Msa1082580:intron 35.0%
AAGGAGATATAGTTTCACCA+AGG + chr7_2:82683663-82683682 None:intergenic 35.0%
!! GTTCTGAAATTGTAAGTGTC+TGG - chr7_2:82683784-82683803 Msa1082580:CDS 35.0%
ATTGTAAGTGTCTGGCAATT+TGG - chr7_2:82683792-82683811 Msa1082580:CDS 35.0%
TTGTAAGTGTCTGGCAATTT+GGG - chr7_2:82683793-82683812 Msa1082580:CDS 35.0%
GACTGTCGTTAGACAATTTA+GGG + chr7_2:82683849-82683868 None:intergenic 35.0%
TGACTGTCGTTAGACAATTT+AGG + chr7_2:82683850-82683869 None:intergenic 35.0%
! AAAACTTCATTTTGTGGCAC+TGG - chr7_2:82684012-82684031 Msa1082580:intron 35.0%
TTCAGCTTCGTGTATATTTG+AGG - chr7_2:82684174-82684193 Msa1082580:intron 35.0%
TACATGGGCATTAAGAAAGA+TGG + chr7_2:82684386-82684405 None:intergenic 35.0%
!! GATAGGAGAGTATTATCTTG+AGG - chr7_2:82684409-82684428 Msa1082580:CDS 35.0%
GTTGAGTTTGACCATATGTT+TGG - chr7_2:82684471-82684490 Msa1082580:intron 35.0%
ATGATGCATTATGTGATTCC+AGG - chr7_2:82684498-82684517 Msa1082580:intron 35.0%
ATCTCCAGAAACAGGTATAT+CGG - chr7_2:82684602-82684621 Msa1082580:CDS 35.0%
TATACCGATATACCTGTTTC+TGG + chr7_2:82684609-82684628 None:intergenic 35.0%
! CTTGTTATGATATATGTGGC+AGG - chr7_2:82684819-82684838 Msa1082580:CDS 35.0%
! AGTTTCCCCTCTATTGTTTT+AGG - chr7_2:82684945-82684964 Msa1082580:intron 35.0%
ACGAATCGGGAATAAATGTA+CGG + chr7_2:82685021-82685040 None:intergenic 35.0%
!! ATTCCCGATTCGTTGAATTT+TGG - chr7_2:82685028-82685047 Msa1082580:intron 35.0%
ACCTCCAAAATTCAACGAAT+CGG + chr7_2:82685035-82685054 None:intergenic 35.0%
!! TACTATTACTGGTTGGTCTT+GGG - chr7_2:82685273-82685292 Msa1082580:intron 35.0%
! CTTGGGAACTTTGTTTGTAT+AGG - chr7_2:82685290-82685309 Msa1082580:intron 35.0%
! TGGGAACTTTGTTTGTATAG+GGG - chr7_2:82685292-82685311 Msa1082580:intron 35.0%
TAAACCAAAACTCGCTCAAA+TGG + chr7_2:82685461-82685480 None:intergenic 35.0%
TGCATTGTCATATGTCATGA+AGG + chr7_2:82685542-82685561 None:intergenic 35.0%
GACATATGACAATGCAAACA+TGG - chr7_2:82685546-82685565 Msa1082580:intron 35.0%
!! TTTTGCATTTTCTGGGTTGA+AGG + chr7_2:82685706-82685725 None:intergenic 35.0%
! TTTTTGAACAGGGGTGATAT+GGG + chr7_2:82685868-82685887 None:intergenic 35.0%
!! AAAGAGTATCAAAGTATGGG+TGG + chr7_2:82685937-82685956 None:intergenic 35.0%
ATCAATACATAAGGGTGGTT+CGG + chr7_2:82686004-82686023 None:intergenic 35.0%
! AATCGTTTTCTTTTCTGGGT+TGG - chr7_2:82686208-82686227 Msa1082580:intron 35.0%
GAGTAGTTATAGCAGAGAAA+AGG - chr7_2:82686242-82686261 Msa1082580:intron 35.0%
CAGAGAAAAGGACAAGATAA+GGG - chr7_2:82686254-82686273 Msa1082580:CDS 35.0%
AGAGAACAAGGAGAAAAAGA+GGG - chr7_2:82686308-82686327 Msa1082580:intron 35.0%
AAAAAGAGGGCAAGGAAAAA+GGG - chr7_2:82686321-82686340 Msa1082580:intron 35.0%
AGGGAAGAGTGAAAAATAAG+GGG - chr7_2:82686368-82686387 Msa1082580:intron 35.0%
AATAAGGGGAAGAGAAACAA+AGG - chr7_2:82686382-82686401 Msa1082580:intron 35.0%
AGAAACAAAGGAAAGGGAAA+AGG - chr7_2:82686394-82686413 Msa1082580:intron 35.0%
! GCCAATAAAGTGAGAGTTTT+TGG - chr7_2:82686553-82686572 Msa1082580:CDS 35.0%
GGATTTGAAAATTCTGGGTT+TGG - chr7_2:82686574-82686593 Msa1082580:CDS 35.0%
TGGGTTTGGATGAAGTTTAT+TGG - chr7_2:82686588-82686607 Msa1082580:CDS 35.0%
!!! TTGATGGGTTTTGTTGATGT+TGG - chr7_2:82686620-82686639 Msa1082580:intron 35.0%
GTTGGATGATGTTTATTGGA+TGG - chr7_2:82686638-82686657 Msa1082580:intron 35.0%
! TGATGTTTATTGGATGGGTT+TGG - chr7_2:82686644-82686663 Msa1082580:intron 35.0%
CACATTTCGCTCAAATAACA+GGG - chr7_2:82686966-82686985 Msa1082580:intron 35.0%
ATAACATGGAGAACTTCGTT+CGG + chr7_2:82687073-82687092 None:intergenic 35.0%
! GCAATTCATGTTTTCTTTCC+TGG - chr7_2:82687225-82687244 Msa1082580:CDS 35.0%
AAAAGTTAAAAGCTTTCGCC+AGG + chr7_2:82687246-82687265 None:intergenic 35.0%
CGAACAGTTGAGAAATTGAG+AGG - chr7_2:82680043-82680062 Msa1082580:three_prime_UTR 40.0%
ATTGAGAGGGAAAATTGGAG+CGG - chr7_2:82680057-82680076 Msa1082580:three_prime_UTR 40.0%
ATATCCTTCGCGTCCATTTA+GGG + chr7_2:82680135-82680154 None:intergenic 40.0%
AATATCCTTCGCGTCCATTT+AGG + chr7_2:82680136-82680155 None:intergenic 40.0%
!! TTTCTCTGAGATTCTTTGGG+AGG + chr7_2:82680213-82680232 None:intergenic 40.0%
GAATCTCAGAGAAAACCTGA+TGG - chr7_2:82680219-82680238 Msa1082580:three_prime_UTR 40.0%
TAGGTTTATGCACTTACTGG+TGG - chr7_2:82680346-82680365 Msa1082580:intron 40.0%
! TCAATTGATGGCATAAGAGG+TGG + chr7_2:82680376-82680395 None:intergenic 40.0%
! GCATCAATTGATGGCATAAG+AGG + chr7_2:82680379-82680398 None:intergenic 40.0%
AAAGCCTCCTACTCATGAAA+AGG - chr7_2:82680414-82680433 Msa1082580:intron 40.0%
! AGAACCTTTTCATGAGTAGG+AGG + chr7_2:82680421-82680440 None:intergenic 40.0%
TTACGAGCAGAATTGGTGAA+AGG + chr7_2:82680816-82680835 None:intergenic 40.0%
!! TTTCAGGTTCGAGTAGTCAA+TGG - chr7_2:82680938-82680957 Msa1082580:intron 40.0%
GCAAAAGAATAGTCTCCAGT+AGG + chr7_2:82680971-82680990 None:intergenic 40.0%
AATGTATCGAGCTGTGATTG+TGG - chr7_2:82681264-82681283 Msa1082580:intron 40.0%
ATGTATCGAGCTGTGATTGT+GGG - chr7_2:82681265-82681284 Msa1082580:intron 40.0%
TACTTTCCGCTGAAGGATAT+TGG - chr7_2:82681421-82681440 Msa1082580:intron 40.0%
GCCACATTAAGGAAACATGT+TGG - chr7_2:82681950-82681969 Msa1082580:intron 40.0%
CTCACTGTCATTACCCAATT+TGG + chr7_2:82681991-82682010 None:intergenic 40.0%
! CTGTACGGATGGGATTTTTA+AGG - chr7_2:82682017-82682036 Msa1082580:exon 40.0%
AGGTTAACTATCCGATCCAA+AGG + chr7_2:82682101-82682120 None:intergenic 40.0%
GGATCGGATAGTTAACCTTA+TGG - chr7_2:82682103-82682122 Msa1082580:intron 40.0%
CGGATAGTTAACCTTATGGA+TGG - chr7_2:82682107-82682126 Msa1082580:intron 40.0%
AATGGACCTGGTTATTTGCA+AGG - chr7_2:82682247-82682266 Msa1082580:intron 40.0%
CTGCTTTATCTACCTAGACA+TGG - chr7_2:82682447-82682466 Msa1082580:intron 40.0%
TTACTATCACCACATGGCAA+TGG + chr7_2:82682912-82682931 None:intergenic 40.0%
AACGAGTTACTATCACCACA+TGG + chr7_2:82682918-82682937 None:intergenic 40.0%
CACAAGAAATGGAGCGAAAA+CGG - chr7_2:82682971-82682990 Msa1082580:intron 40.0%
ACAAGAAATGGAGCGAAAAC+GGG - chr7_2:82682972-82682991 Msa1082580:intron 40.0%
TTACTATGAGGGTAAACCGA+TGG + chr7_2:82683095-82683114 None:intergenic 40.0%
CTCCTAAGCTAATGGTGTAT+TGG + chr7_2:82683220-82683239 None:intergenic 40.0%
CATGCAAACGAAAATGTGCA+CGG + chr7_2:82683357-82683376 None:intergenic 40.0%
! GTGCACATTTTCGTTTGCAT+GGG - chr7_2:82683356-82683375 Msa1082580:intron 40.0%
TGTACTTGCATATTTGTGCC+TGG - chr7_2:82683547-82683566 Msa1082580:intron 40.0%
GTACTTGCATATTTGTGCCT+GGG - chr7_2:82683548-82683567 Msa1082580:intron 40.0%
GGTTACTGAACAGTCTCAAT+TGG - chr7_2:82683594-82683613 Msa1082580:intron 40.0%
TGATGCAGAAGTTACAGAGA+GGG - chr7_2:82683633-82683652 Msa1082580:intron 40.0%
GAATGTGCAACTTCCACAAA+TGG - chr7_2:82683684-82683703 Msa1082580:CDS 40.0%
TGCTGGTGTATCATGTTAAG+CGG - chr7_2:82683904-82683923 Msa1082580:intron 40.0%
TTACATAGTCTCTAACCCAG+AGG - chr7_2:82683957-82683976 Msa1082580:intron 40.0%
ACCTAACACAACTTTCCTCT+GGG + chr7_2:82683975-82683994 None:intergenic 40.0%
TACCTAACACAACTTTCCTC+TGG + chr7_2:82683976-82683995 None:intergenic 40.0%
GGAAAGTTGTGTTAGGTAGT+AGG - chr7_2:82683978-82683997 Msa1082580:intron 40.0%
GAGCAAACATTGCAAGATCT+CGG - chr7_2:82684266-82684285 Msa1082580:intron 40.0%
AGCAAACATTGCAAGATCTC+GGG - chr7_2:82684267-82684286 Msa1082580:intron 40.0%
GCATCATGAACCCAAACATA+TGG + chr7_2:82684485-82684504 None:intergenic 40.0%
! TCTGCACAAACAGCTTTTGT+TGG + chr7_2:82684544-82684563 None:intergenic 40.0%
ATCAAAGAAATTTGGGGGGT+GGG + chr7_2:82684792-82684811 None:intergenic 40.0%
AATCAAAGAAATTTGGGGGG+TGG + chr7_2:82684793-82684812 None:intergenic 40.0%
ACGAGCCTAAAACAATAGAG+GGG + chr7_2:82684953-82684972 None:intergenic 40.0%
CACGAGCCTAAAACAATAGA+GGG + chr7_2:82684954-82684973 None:intergenic 40.0%
TCACGAGCCTAAAACAATAG+AGG + chr7_2:82684955-82684974 None:intergenic 40.0%
!!! ATTGTTTTAGGCTCGTGATC+TGG - chr7_2:82684957-82684976 Msa1082580:intron 40.0%
CCTCCAAAATTCAACGAATC+GGG + chr7_2:82685034-82685053 None:intergenic 40.0%
!! AAACTGTTGTTTCAGGCGAA+AGG - chr7_2:82685142-82685161 Msa1082580:intron 40.0%
!! AACTGTTGTTTCAGGCGAAA+GGG - chr7_2:82685143-82685162 Msa1082580:intron 40.0%
CAAAAAGGACCAAAAACGCA+AGG - chr7_2:82685170-82685189 Msa1082580:intron 40.0%
! TATGGTGTACCTTGCGTTTT+TGG + chr7_2:82685182-82685201 None:intergenic 40.0%
!! GTACTATTACTGGTTGGTCT+TGG - chr7_2:82685272-82685291 Msa1082580:intron 40.0%
! ACTTTGTTTGTATAGGGGCA+TGG - chr7_2:82685297-82685316 Msa1082580:intron 40.0%
!!! TCTGAGGCCTTTTGTTTTCT+AGG + chr7_2:82685351-82685370 None:intergenic 40.0%
! ACAATGCAAACATGGTGATG+TGG - chr7_2:82685554-82685573 Msa1082580:intron 40.0%
!! TGGTATGCTGAGTTGACTTT+TGG - chr7_2:82685574-82685593 Msa1082580:intron 40.0%
!! CATTTTCTGGGTTGAAGGAT+TGG + chr7_2:82685701-82685720 None:intergenic 40.0%
AATGGGAAGTAGAAGGGTTT+GGG + chr7_2:82685840-82685859 None:intergenic 40.0%
AAATGGGAAGTAGAAGGGTT+TGG + chr7_2:82685841-82685860 None:intergenic 40.0%
! TTTTGAACAGGGGTGATATG+GGG + chr7_2:82685867-82685886 None:intergenic 40.0%
! GTTTTTGAACAGGGGTGATA+TGG + chr7_2:82685869-82685888 None:intergenic 40.0%
AGTATCAAAGTATGGGTGGA+AGG + chr7_2:82685933-82685952 None:intergenic 40.0%
AATAAGGCAATGGAGAAGGA+AGG + chr7_2:82685975-82685994 None:intergenic 40.0%
GAAGAATAAGGCAATGGAGA+AGG + chr7_2:82685979-82685998 None:intergenic 40.0%
TCGGTTGAAGAATAAGGCAA+TGG + chr7_2:82685985-82686004 None:intergenic 40.0%
TGAAGATTCTAGTGAGAGAG+AGG + chr7_2:82686111-82686130 None:intergenic 40.0%
!! TCTTTTCTGGGTTGGAAAAG+TGG - chr7_2:82686216-82686235 Msa1082580:intron 40.0%
GCAGAGAAAAGGACAAGATA+AGG - chr7_2:82686253-82686272 Msa1082580:intron 40.0%
GAGAGAACAAGGAGAAAAAG+AGG - chr7_2:82686307-82686326 Msa1082580:intron 40.0%
GAAAAAGAGGGCAAGGAAAA+AGG - chr7_2:82686320-82686339 Msa1082580:intron 40.0%
GGGAAGAGAAACAAAGGAAA+GGG - chr7_2:82686388-82686407 Msa1082580:intron 40.0%
GAGGAGGATAAAGATGTTTG+TGG - chr7_2:82686443-82686462 Msa1082580:CDS 40.0%
GAGGATAAAGATGTTTGTGG+TGG - chr7_2:82686446-82686465 Msa1082580:intron 40.0%
!! ATAGACGGTGTTATCGATGT+TGG - chr7_2:82686484-82686503 Msa1082580:intron 40.0%
GATGAAGATCAAGATGAACC+TGG - chr7_2:82686687-82686706 Msa1082580:intron 40.0%
GATGTTACAAGGTTGGAATC+TGG - chr7_2:82686906-82686925 Msa1082580:intron 40.0%
! CCTGTTATTTGAGCGAAATG+TGG + chr7_2:82686968-82686987 None:intergenic 40.0%
CCACATTTCGCTCAAATAAC+AGG - chr7_2:82686965-82686984 Msa1082580:intron 40.0%
AGTTCTCCATGTTATCTGTC+AGG - chr7_2:82687078-82687097 Msa1082580:intron 40.0%
ATTGCACCTGACAGATAACA+TGG + chr7_2:82687087-82687106 None:intergenic 40.0%
CAAAACCTCCAAGAGTTTGA+TGG + chr7_2:82687320-82687339 None:intergenic 40.0%
! GCGTCCATTTAGGGTTTCAT+AGG + chr7_2:82680126-82680145 None:intergenic 45.0%
ATGGACGCGAAGGATATTCT+TGG - chr7_2:82680138-82680157 Msa1082580:three_prime_UTR 45.0%
GGATATTGTGACTGACCCAA+TGG + chr7_2:82680857-82680876 None:intergenic 45.0%
GTCAATGGTGTTCTACCTAC+TGG - chr7_2:82680953-82680972 Msa1082580:intron 45.0%
TATCCTTCAGCGGAAAGTAG+AGG + chr7_2:82681420-82681439 None:intergenic 45.0%
TCAAGGACTGTACCAGCTTT+AGG + chr7_2:82681476-82681495 None:intergenic 45.0%
!!! CTCTGCTTTAGTTTTGGCGA+TGG - chr7_2:82681646-82681665 Msa1082580:intron 45.0%
ACTGAGCGTTATCTCTTGTG+AGG - chr7_2:82681698-82681717 Msa1082580:intron 45.0%
! TACCATAGTTTGGGACGTCT+TGG - chr7_2:82681854-82681873 Msa1082580:intron 45.0%
! ACCATAGTTTGGGACGTCTT+GGG - chr7_2:82681855-82681874 Msa1082580:intron 45.0%
! GTGGCTCTACAAATCATCAC+TGG + chr7_2:82681935-82681954 None:intergenic 45.0%
GACAGTGAGAGACAACTGTA+CGG - chr7_2:82682002-82682021 Msa1082580:intron 45.0%
TGAGAGACAACTGTACGGAT+GGG - chr7_2:82682007-82682026 Msa1082580:three_prime_UTR 45.0%
TTTGAACCATTGCTACCGTG+AGG - chr7_2:82682047-82682066 Msa1082580:CDS 45.0%
TTGAACCATTGCTACCGTGA+GGG - chr7_2:82682048-82682067 Msa1082580:CDS 45.0%
AACTATCCGATCCAAAGGAC+AGG + chr7_2:82682096-82682115 None:intergenic 45.0%
AGAGGTCCTTGCAAATAACC+AGG + chr7_2:82682256-82682275 None:intergenic 45.0%
ATCTACCTAGACATGGACCA+AGG - chr7_2:82682454-82682473 Msa1082580:intron 45.0%
CTGATAGGTTCCCTTCATCT+CGG - chr7_2:82682537-82682556 Msa1082580:CDS 45.0%
TCGGACTGTAGAGGAGTTAA+AGG - chr7_2:82682556-82682575 Msa1082580:intron 45.0%
!! CTTGTTGTCTTGTTTGGGAG+AGG + chr7_2:82683011-82683030 None:intergenic 45.0%
AAGAATAGCCGAGTTACGGA+TGG - chr7_2:82683163-82683182 Msa1082580:CDS 45.0%
CTTAGAAGCCATCCGTAACT+CGG + chr7_2:82683174-82683193 None:intergenic 45.0%
! CGTGCACATTTTCGTTTGCA+TGG - chr7_2:82683355-82683374 Msa1082580:intron 45.0%
! CACATTTTCGTTTGCATGGG+AGG - chr7_2:82683359-82683378 Msa1082580:intron 45.0%
CTGATGCAGAAGTTACAGAG+AGG - chr7_2:82683632-82683651 Msa1082580:intron 45.0%
TGTGGAAGTTGCACATTCGA+AGG + chr7_2:82683682-82683701 None:intergenic 45.0%
! GCAGAAGGTACAACCATTTG+TGG + chr7_2:82683700-82683719 None:intergenic 45.0%
!! GTAGAGGCATTATCTGCAGA+AGG + chr7_2:82683715-82683734 None:intergenic 45.0%
CCTCTAACAGAGCTACTTGA+CGG + chr7_2:82683884-82683903 None:intergenic 45.0%
ATCATGTTAAGCGGAACCCT+AGG - chr7_2:82683913-82683932 Msa1082580:intron 45.0%
ACCCAGAGGAAAGTTGTGTT+AGG - chr7_2:82683971-82683990 Msa1082580:intron 45.0%
GACATATGCACTCGAGCAAA+TGG - chr7_2:82684196-82684215 Msa1082580:intron 45.0%
! TTTGATAGTCCGAACTCCAG+CGG + chr7_2:82684240-82684259 None:intergenic 45.0%
CTGGAGTTCGGACTATCAAA+CGG - chr7_2:82684240-82684259 Msa1082580:CDS 45.0%
TGGAGTTCGGACTATCAAAC+GGG - chr7_2:82684241-82684260 Msa1082580:CDS 45.0%
GCAAACATTGCAAGATCTCG+GGG - chr7_2:82684268-82684287 Msa1082580:intron 45.0%
! TCCAGGTCAATTTGAAACCG+AGG - chr7_2:82684515-82684534 Msa1082580:intron 45.0%
! CCAGGTCAATTTGAAACCGA+GGG - chr7_2:82684516-82684535 Msa1082580:intron 45.0%
! ACAGCTTTTGTTGGAACCCT+CGG + chr7_2:82684535-82684554 None:intergenic 45.0%
TTGGCTGAATCTCCAGAAAC+AGG - chr7_2:82684594-82684613 Msa1082580:intron 45.0%
TCAAAGAAATTTGGGGGGTG+GGG + chr7_2:82684791-82684810 None:intergenic 45.0%
GTGGCAGGTGCAATATAAAG+AGG - chr7_2:82684834-82684853 Msa1082580:CDS 45.0%
GTGCAATATAAAGAGGCCGA+AGG - chr7_2:82684841-82684860 Msa1082580:CDS 45.0%
ATCACGGAACGATGAACCTT+CGG + chr7_2:82684860-82684879 None:intergenic 45.0%
TTTCACCGTAGGATCCATCA+CGG + chr7_2:82684876-82684895 None:intergenic 45.0%
!! CCCGATTCGTTGAATTTTGG+AGG - chr7_2:82685031-82685050 Msa1082580:intron 45.0%
! AGGCGAAAGGGTTAGCAAAA+AGG - chr7_2:82685155-82685174 Msa1082580:intron 45.0%
! CTTTTATGAGCTGCTGTAGG+TGG + chr7_2:82685327-82685346 None:intergenic 45.0%
! GGTCTTTTATGAGCTGCTGT+AGG + chr7_2:82685330-82685349 None:intergenic 45.0%
CAAAACTCGCTCAAATGGCA+GGG + chr7_2:82685456-82685475 None:intergenic 45.0%
TAAGGGGTTAGAGGAGATGA+AGG + chr7_2:82685663-82685682 None:intergenic 45.0%
TGAAGGAGATAAGGGGTTAG+AGG + chr7_2:82685672-82685691 None:intergenic 45.0%
GAGCAGATGAAGGAGATAAG+GGG + chr7_2:82685679-82685698 None:intergenic 45.0%
GGAGCAGATGAAGGAGATAA+GGG + chr7_2:82685680-82685699 None:intergenic 45.0%
TGGAGCAGATGAAGGAGATA+AGG + chr7_2:82685681-82685700 None:intergenic 45.0%
TGAAGGATTGGAGCAGATGA+AGG + chr7_2:82685689-82685708 None:intergenic 45.0%
ATGGGAAGTAGAAGGGTTTG+GGG + chr7_2:82685839-82685858 None:intergenic 45.0%
GGTGGAAATGGGAAGTAGAA+GGG + chr7_2:82685846-82685865 None:intergenic 45.0%
!! AGGAAGGTGGTGATGGATTT+GGG + chr7_2:82685913-82685932 None:intergenic 45.0%
!! AAGGAAGGTGGTGATGGATT+TGG + chr7_2:82685914-82685933 None:intergenic 45.0%
TCAAAGTATGGGTGGAAGGA+AGG + chr7_2:82685929-82685948 None:intergenic 45.0%
!! GGTGGTTCGGTTGAAGAATA+AGG + chr7_2:82685991-82686010 None:intergenic 45.0%
AGAGAAAGAGAGAGAGGAGA+GGG + chr7_2:82686073-82686092 None:intergenic 45.0%
TCCTCTCTCTCTTTCTCTCT+GGG - chr7_2:82686075-82686094 Msa1082580:intron 45.0%
TCTGAAGAGGAGGGATCTAA+AGG - chr7_2:82686179-82686198 Msa1082580:intron 45.0%
ACAAGGAGAAAAAGAGGGCA+AGG - chr7_2:82686313-82686332 Msa1082580:intron 45.0%
GGCAAGGAAAAAGGGAAGAA+GGG - chr7_2:82686329-82686348 Msa1082580:intron 45.0%
AGGGAAACGAAGAAGGAGAA+AGG - chr7_2:82686348-82686367 Msa1082580:intron 45.0%
GGGAAACGAAGAAGGAGAAA+GGG - chr7_2:82686349-82686368 Msa1082580:intron 45.0%
GGGGAAGAGAAACAAAGGAA+AGG - chr7_2:82686387-82686406 Msa1082580:intron 45.0%
GGGAAAAGGAGTAGAGAGAA+CGG - chr7_2:82686408-82686427 Msa1082580:CDS 45.0%
!! AACTGGTCTTGGTGGAAAAG+AGG - chr7_2:82686520-82686539 Msa1082580:intron 45.0%
GTTATCTGTCAGGTGCAATG+TGG - chr7_2:82687088-82687107 Msa1082580:intron 45.0%
GATAGCAGCCATCAAACTCT+TGG - chr7_2:82687309-82687328 Msa1082580:five_prime_UTR 45.0%
!!! TTATTTTTTTTTTTATTTAG+AGG - chr7_2:82686937-82686956 Msa1082580:intron 5.0%
!!! TATTTTTTTTTTTATTTAGA+GGG - chr7_2:82686938-82686957 Msa1082580:intron 5.0%
!! GTATAACGTCGAAGCATCGG+AGG - chr7_2:82680016-82680035 Msa1082580:three_prime_UTR 50.0%
GAAACCCTAAATGGACGCGA+AGG - chr7_2:82680128-82680147 Msa1082580:three_prime_UTR 50.0%
AAGCCTCTACTTTCCGCTGA+AGG - chr7_2:82681414-82681433 Msa1082580:intron 50.0%
ACCCAAGACGTCCCAAACTA+TGG + chr7_2:82681859-82681878 None:intergenic 50.0%
GTGAGAGACAACTGTACGGA+TGG - chr7_2:82682006-82682025 Msa1082580:three_prime_UTR 50.0%
TGAACCATTGCTACCGTGAG+GGG - chr7_2:82682049-82682068 Msa1082580:CDS 50.0%
TGGGGTGCAGTGTACAAAAG+AGG + chr7_2:82682274-82682293 None:intergenic 50.0%
TACCTAGACATGGACCAAGG+AGG - chr7_2:82682457-82682476 Msa1082580:intron 50.0%
CCTCTACAGTCCGAGATGAA+GGG + chr7_2:82682550-82682569 None:intergenic 50.0%
TCCTCTACAGTCCGAGATGA+AGG + chr7_2:82682551-82682570 None:intergenic 50.0%
GTCTCTGTCATGCAGTGTTG+CGG - chr7_2:82682723-82682742 Msa1082580:intron 50.0%
TCTCTGTCATGCAGTGTTGC+GGG - chr7_2:82682724-82682743 Msa1082580:intron 50.0%
! TGCGGGCTATATTACTTGCC+AGG - chr7_2:82682741-82682760 Msa1082580:intron 50.0%
! GCGGGCTATATTACTTGCCA+GGG - chr7_2:82682742-82682761 Msa1082580:intron 50.0%
AGGATGTGTTGCAATGTCCC+CGG + chr7_2:82682777-82682796 None:intergenic 50.0%
ACATGGCAATGGCTTAAGGC+AGG + chr7_2:82682901-82682920 None:intergenic 50.0%
TGCCTTAAGCCATTGCCATG+TGG - chr7_2:82682900-82682919 Msa1082580:intron 50.0%
CACCACATGGCAATGGCTTA+AGG + chr7_2:82682905-82682924 None:intergenic 50.0%
! TCTTGTTTGGGAGAGGACCA+TGG + chr7_2:82683004-82683023 None:intergenic 50.0%
CGAGTTACGGATGGCTTCTA+AGG - chr7_2:82683172-82683191 Msa1082580:CDS 50.0%
! TACTCTAGCTTCTCTCCGCA+TGG - chr7_2:82683732-82683751 Msa1082580:CDS 50.0%
CTAACAGAGCTACTTGACGG+AGG + chr7_2:82683881-82683900 None:intergenic 50.0%
! CCGTCAAGTAGCTCTGTTAG+AGG - chr7_2:82683881-82683900 Msa1082580:intron 50.0%
! AGTAGCTCTGTTAGAGGTGC+TGG - chr7_2:82683887-82683906 Msa1082580:intron 50.0%
CAAGCTTCAAACTCAACCGC+TGG - chr7_2:82684221-82684240 Msa1082580:CDS 50.0%
CAAACTCAACCGCTGGAGTT+CGG - chr7_2:82684228-82684247 Msa1082580:CDS 50.0%
CCCTCGGTTTCAAATTGACC+TGG + chr7_2:82684519-82684538 None:intergenic 50.0%
CAAAGAAATTTGGGGGGTGG+GGG + chr7_2:82684790-82684809 None:intergenic 50.0%
GAAGGTTCATCGTTCCGTGA+TGG - chr7_2:82684859-82684878 Msa1082580:CDS 50.0%
!! TCGTTCCGTGATGGATCCTA+CGG - chr7_2:82684868-82684887 Msa1082580:CDS 50.0%
TGAAACACCAGGCACACCAA+AGG - chr7_2:82684891-82684910 Msa1082580:CDS 50.0%
AGTGTCGTCTGTGCCAAATG+AGG + chr7_2:82685383-82685402 None:intergenic 50.0%
TCATTTGGCACAGACGACAC+TGG - chr7_2:82685382-82685401 Msa1082580:intron 50.0%
CCAAAACTCGCTCAAATGGC+AGG + chr7_2:82685457-82685476 None:intergenic 50.0%
!! CCTGCCATTTGAGCGAGTTT+TGG - chr7_2:82685454-82685473 Msa1082580:intron 50.0%
! AAGTAGAAGGGTTTGGGGCT+GGG + chr7_2:82685834-82685853 None:intergenic 50.0%
GGGTGGAAATGGGAAGTAGA+AGG + chr7_2:82685847-82685866 None:intergenic 50.0%
GGGTGATATGGGGTGGAAAT+GGG + chr7_2:82685857-82685876 None:intergenic 50.0%
!! GGAAGGTGGTGATGGATTTG+GGG + chr7_2:82685912-82685931 None:intergenic 50.0%
AAGTATGGGTGGAAGGAAGG+TGG + chr7_2:82685926-82685945 None:intergenic 50.0%
GCAATGGAGAAGGAAGGTGA+AGG + chr7_2:82685969-82685988 None:intergenic 50.0%
AGAAAGAGAGAGAGGAGAGG+GGG + chr7_2:82686071-82686090 None:intergenic 50.0%
GAGAAAGAGAGAGAGGAGAG+GGG + chr7_2:82686072-82686091 None:intergenic 50.0%
GAGAGAAAGAGAGAGAGGAG+AGG + chr7_2:82686074-82686093 None:intergenic 50.0%
CTCCTCTCTCTCTTTCTCTC+TGG - chr7_2:82686074-82686093 Msa1082580:intron 50.0%
CCTCTCTCTCTTTCTCTCTG+GGG - chr7_2:82686076-82686095 Msa1082580:intron 50.0%
GGGCAAGGAAAAAGGGAAGA+AGG - chr7_2:82686328-82686347 Msa1082580:intron 50.0%
GGGAAGAAGGGAAACGAAGA+AGG - chr7_2:82686341-82686360 Msa1082580:intron 50.0%
AGAACGGAGAGAGAAGAGAG+AGG - chr7_2:82686424-82686443 Msa1082580:CDS 50.0%
! AAGATGTTTGTGGTGGTGCG+TGG - chr7_2:82686453-82686472 Msa1082580:intron 50.0%
!! TGCGTGGTGGTACTGATAGA+CGG - chr7_2:82686469-82686488 Msa1082580:intron 50.0%
!! GACGGTGTTATCGATGTTGG+TGG - chr7_2:82686487-82686506 Msa1082580:intron 50.0%
! GGTGTTATCGATGTTGGTGG+TGG - chr7_2:82686490-82686509 Msa1082580:intron 50.0%
!! GTTATCGATGTTGGTGGTGG+TGG - chr7_2:82686493-82686512 Msa1082580:intron 50.0%
CTGTCAGGTGCAATGTGGAA+AGG - chr7_2:82687093-82687112 Msa1082580:intron 50.0%
AGCAGCCATCAAACTCTTGG+AGG - chr7_2:82687312-82687331 Msa1082580:five_prime_UTR 50.0%
GAGAGGGAAAATTGGAGCGG+AGG - chr7_2:82680060-82680079 Msa1082580:three_prime_UTR 55.0%
ACCTGATGGCATTTCACGCG+AGG - chr7_2:82680233-82680252 Msa1082580:three_prime_UTR 55.0%
ACCTCGCGTGAAATGCCATC+AGG + chr7_2:82680237-82680256 None:intergenic 55.0%
GAATCCCCTCACGGTAGCAA+TGG + chr7_2:82682056-82682075 None:intergenic 55.0%
CTCCTCCTTGGTCCATGTCT+AGG + chr7_2:82682462-82682481 None:intergenic 55.0%
CCCTTCATCTCGGACTGTAG+AGG - chr7_2:82682547-82682566 Msa1082580:CDS 55.0%
GCGAAAACGGGCACTTTCCA+TGG - chr7_2:82682984-82683003 Msa1082580:intron 55.0%
GTTACAGAGAGGGCTGTCCT+TGG - chr7_2:82683643-82683662 Msa1082580:intron 55.0%
GCGGAGAGAAGCTAGAGTAG+AGG + chr7_2:82683731-82683750 None:intergenic 55.0%
TTGGGGGGTGGGGGAAAATA+AGG + chr7_2:82684781-82684800 None:intergenic 55.0%
GGATCCTACGGTGAAACACC+AGG - chr7_2:82684880-82684899 Msa1082580:CDS 55.0%
TGTGCCTGGTGTTTCACCGT+AGG + chr7_2:82684887-82684906 None:intergenic 55.0%
ACACCAGGCACACCAAAGGT+CGG - chr7_2:82684895-82684914 Msa1082580:CDS 55.0%
! TTTCCGACCTTTGGTGTGCC+TGG + chr7_2:82684901-82684920 None:intergenic 55.0%
! AGTAGAAGGGTTTGGGGCTG+GGG + chr7_2:82685833-82685852 None:intergenic 55.0%
! GAAGTAGAAGGGTTTGGGGC+TGG + chr7_2:82685835-82685854 None:intergenic 55.0%
GGGGTGATATGGGGTGGAAA+TGG + chr7_2:82685858-82685877 None:intergenic 55.0%
TGAACAGGGGTGATATGGGG+TGG + chr7_2:82685864-82685883 None:intergenic 55.0%
CCCCAGAGAGAAAGAGAGAG+AGG + chr7_2:82686079-82686098 None:intergenic 55.0%
ACGGAGAGAGAAGAGAGAGG+AGG - chr7_2:82686427-82686446 Msa1082580:CDS 55.0%
! ATGTTTGTGGTGGTGCGTGG+TGG - chr7_2:82686456-82686475 Msa1082580:intron 55.0%
!! ATCGATGTTGGTGGTGGTGG+TGG - chr7_2:82686496-82686515 Msa1082580:intron 55.0%
!! TTGGTGGTGGTGGTGGAAAC+TGG - chr7_2:82686503-82686522 Msa1082580:intron 55.0%
!! GTGGTGGTGGAAACTGGTCT+TGG - chr7_2:82686509-82686528 Msa1082580:intron 55.0%
!! GTGGTGGAAACTGGTCTTGG+TGG - chr7_2:82686512-82686531 Msa1082580:intron 55.0%
CTTGCCAGGGCTGCATCTTC+CGG - chr7_2:82682755-82682774 Msa1082580:intron 60.0%
TTGCCAGGGCTGCATCTTCC+GGG - chr7_2:82682756-82682775 Msa1082580:intron 60.0%
GGGTGGAAGGAAGGTGGTGA+TGG + chr7_2:82685920-82685939 None:intergenic 60.0%
TGCCAGGGCTGCATCTTCCG+GGG - chr7_2:82682757-82682776 Msa1082580:intron 65.0%
GTCCCCGGAAGATGCAGCCC+TGG + chr7_2:82682762-82682781 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82680001 82687406 82680001 ID=Msa1082580;Name=Msa1082580
chr7_2 mRNA 82680001 82687406 82680001 ID=Msa1082580-mRNA-1;Parent=Msa1082580;Name=Msa1082580-mRNA-1;_AED=0.18;_eAED=0.18;_QI=137|1|1|1|0.93|0.88|17|333|433
chr7_2 exon 82680001 82680307 82680001 ID=Msa1082580-mRNA-1:exon:21491;Parent=Msa1082580-mRNA-1
chr7_2 exon 82682004 82682095 82682004 ID=Msa1082580-mRNA-1:exon:21490;Parent=Msa1082580-mRNA-1
chr7_2 exon 82682216 82682250 82682216 ID=Msa1082580-mRNA-1:exon:21489;Parent=Msa1082580-mRNA-1
chr7_2 exon 82682355 82682391 82682355 ID=Msa1082580-mRNA-1:exon:21488;Parent=Msa1082580-mRNA-1
chr7_2 exon 82682495 82682566 82682495 ID=Msa1082580-mRNA-1:exon:21487;Parent=Msa1082580-mRNA-1
chr7_2 exon 82682792 82682887 82682792 ID=Msa1082580-mRNA-1:exon:21486;Parent=Msa1082580-mRNA-1
chr7_2 exon 82683118 82683228 82683118 ID=Msa1082580-mRNA-1:exon:21485;Parent=Msa1082580-mRNA-1
chr7_2 exon 82683654 82683812 82683654 ID=Msa1082580-mRNA-1:exon:21484;Parent=Msa1082580-mRNA-1
chr7_2 exon 82684214 82684261 82684214 ID=Msa1082580-mRNA-1:exon:21483;Parent=Msa1082580-mRNA-1
chr7_2 exon 82684360 82684452 82684360 ID=Msa1082580-mRNA-1:exon:21482;Parent=Msa1082580-mRNA-1
chr7_2 exon 82684602 82684669 82684602 ID=Msa1082580-mRNA-1:exon:21481;Parent=Msa1082580-mRNA-1
chr7_2 exon 82684814 82684943 82684814 ID=Msa1082580-mRNA-1:exon:21480;Parent=Msa1082580-mRNA-1
chr7_2 exon 82686254 82686310 82686254 ID=Msa1082580-mRNA-1:exon:21479;Parent=Msa1082580-mRNA-1
chr7_2 exon 82686404 82686463 82686404 ID=Msa1082580-mRNA-1:exon:21478;Parent=Msa1082580-mRNA-1
chr7_2 exon 82686547 82686612 82686547 ID=Msa1082580-mRNA-1:exon:21477;Parent=Msa1082580-mRNA-1
chr7_2 exon 82686972 82687058 82686972 ID=Msa1082580-mRNA-1:exon:21476;Parent=Msa1082580-mRNA-1
chr7_2 exon 82687153 82687406 82687153 ID=Msa1082580-mRNA-1:exon:21475;Parent=Msa1082580-mRNA-1
chr7_2 five_prime_UTR 82687270 82687406 82687270 ID=Msa1082580-mRNA-1:five_prime_utr;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82687153 82687269 82687153 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82686972 82687058 82686972 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82686547 82686612 82686547 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82686404 82686463 82686404 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82686254 82686310 82686254 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82684814 82684943 82684814 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82684602 82684669 82684602 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82684360 82684452 82684360 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82684214 82684261 82684214 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82683654 82683812 82683654 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82683118 82683228 82683118 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82682792 82682887 82682792 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82682495 82682566 82682495 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82682355 82682391 82682355 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82682216 82682250 82682216 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 CDS 82682030 82682095 82682030 ID=Msa1082580-mRNA-1:cds;Parent=Msa1082580-mRNA-1
chr7_2 three_prime_UTR 82682004 82682029 82682004 ID=Msa1082580-mRNA-1:three_prime_utr;Parent=Msa1082580-mRNA-1
chr7_2 three_prime_UTR 82680001 82680307 82680001 ID=Msa1082580-mRNA-1:three_prime_utr;Parent=Msa1082580-mRNA-1
Gene Sequence

>Msa1082580

ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTTATGCACTTACTGGTGGAATGCCACCTCTTATGCCATCAATTGATGCTTCTCAATTGAAGAAAAAGCCTCCTACTCATGAAAAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTTTACCATTGGGTTCGAGTAGTCAATGGTGTTCTACCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGTCTGTTGACATTATCAAATACACAGACGAGGAATACGAAAAGTATTTGACAGATCCTACATGGACCAAGGAGGAGACAAATGAATTATTTGATTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTGATAGCTGATAGGTTCCCTTCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGGGCTATATTACTTGCCAGGGCTGCATCTTCCGGGGACATTGCAACACATCCTATCATTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTTTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGAATAGCCGAGTTACGGATGGCTTCTAAGGTTACTGAACAGTCTCAATTGGCTGTTGCTTCAAATGCTGATGCAGAAGTTACAGAGAGGGCTGTCCTTGGTGAAACTATATCTCCTTCGAATGTGCAACTTCCACAAATGGTTGTACCTTCTGCAGATAATGCCTCTACTCTAGCTTCTCTCCGCATGCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACTCAACCGCTGGAGTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTCAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCGTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGACCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGCGAAAGGGTTAGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCCACCTACAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAA

Protein sequence

>Msa1082580

MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDASQLKKKPPTHEKVTWQWLPFTNSARKDDLHLYHWVRVVNGVLPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPTWTKEETNELFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVLRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQLAVASNADAEVTERAVLGETISPSNVQLPQMVVPSADNASTLASLRMLRVYLRTYALEQMVQASNSTAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGGERVSKKDQKRKGHGAPPTAAHKRPRKQKASDL*