AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0733140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733140 MtrunA17_Chr5g0428261 95.695 511 13 2 1 509 1 504 0.0 974
Msa0733140 MtrunA17_Chr3g0140911 76.378 508 112 5 1 506 1 502 0.0 767
Msa0733140 MtrunA17_Chr1g0200811 54.509 499 216 6 8 498 12 507 0.0 533
Msa0733140 MtrunA17_Chr6g0462451 53.347 478 205 6 4 477 10 473 1.76e-173 498
Msa0733140 MtrunA17_Chr4g0074681 53.642 453 198 4 28 477 28 471 4.54e-167 482
Msa0733140 MtrunA17_Chr6g0467341 52.083 480 217 5 28 505 27 495 1.47e-162 470
Msa0733140 MtrunA17_Chr8g0362191 45.065 537 229 7 26 499 54 587 9.53e-151 444
Msa0733140 MtrunA17_Chr4g0056841 29.157 415 193 8 39 426 4 344 2.41e-50 176
Msa0733140 MtrunA17_Chr4g0056911 43.590 117 66 0 81 197 159 275 2.69e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733140 AT1G09960.1 69.512 492 143 4 15 505 21 506 0.0 679
Msa0733140 AT1G22710.1 51.697 501 222 5 17 508 17 506 0.0 517
Msa0733140 AT5G06170.1 52.371 485 216 4 19 498 17 491 4.43e-178 509
Msa0733140 AT1G66570.1 52.121 495 221 5 10 498 7 491 3.17e-176 505
Msa0733140 AT2G14670.1 51.587 504 226 5 1 498 1 492 2.32e-174 500
Msa0733140 AT1G71880.1 52.495 501 227 5 12 506 10 505 8.02e-174 499
Msa0733140 AT5G43610.1 52.342 491 216 5 14 498 14 492 3.25e-173 497
Msa0733140 AT1G71890.1 50.505 495 228 6 19 505 18 503 8.11e-172 494
Msa0733140 AT2G02860.1 46.852 540 222 8 19 498 46 580 1.84e-156 458
Msa0733140 AT1G66570.2 51.914 418 185 5 10 421 7 414 3.88e-149 433
Msa0733140 AT1G66570.3 52.009 423 185 6 10 426 7 417 1.69e-148 433
Msa0733140 AT2G02860.2 43.409 440 184 8 119 498 16 450 1.19e-107 329

Find 235 sgRNAs with CRISPR-Local

Find 765 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACGAAATTCCAAGATATT+TGG 0.143604 5_1:+46131447 None:intergenic
TGCCTATTTCTCCCTGTTTA+TGG 0.144293 5_1:-46135471 Msa0733140:CDS
TCAGTATCAAAGAGCATAAA+TGG 0.184479 5_1:+46135107 None:intergenic
ACACAATGTCAATCATTATT+TGG 0.188524 5_1:+46131405 None:intergenic
AACTCGGTATCCCTCATAAA+TGG 0.196305 5_1:-46140079 Msa0733140:CDS
GGGACTCTCAAATATCTTTA+TGG 0.224551 5_1:-46134919 Msa0733140:CDS
AAACAGACATCTCAAATTAT+TGG 0.224688 5_1:+46131598 None:intergenic
TTCGATATGCGTTGAAATTA+AGG 0.240189 5_1:+46134444 None:intergenic
TTGCTTAATTCAGTTGTTCT+TGG 0.247072 5_1:-46134999 Msa0733140:CDS
ATAGCAATCTTTACCGTTCT+TGG 0.247467 5_1:-46134795 Msa0733140:CDS
GGACCGTGGGATCAATTATT+TGG 0.247560 5_1:-46132012 Msa0733140:CDS
GTCCTTGCCGTTGTTATAAT+TGG 0.250374 5_1:-46139924 Msa0733140:CDS
TTGTGTCGGATGTTATATTA+AGG 0.268859 5_1:-46131355 Msa0733140:three_prime_UTR
TGGATGGGTCGGGAAATTTA+TGG 0.270994 5_1:-46135083 Msa0733140:CDS
GGAGGCCTTATTTATGATAC+TGG 0.272965 5_1:-46135047 Msa0733140:CDS
CTAATGAATAAATGAAATAT+TGG 0.276394 5_1:-46131724 Msa0733140:three_prime_UTR
TGGAAAATTTATTTATTTCC+AGG 0.284545 5_1:-46131220 Msa0733140:intron
ATGGCTGTTGGTAACATTCT+TGG 0.289033 5_1:-46135452 Msa0733140:CDS
CGGCATCGTGATGCCGAATC+TGG 0.306104 5_1:+46140283 None:intergenic
TGATGTGGATGGTCGGGTTC+TGG 0.307515 5_1:+46140232 None:intergenic
ATATGTTCCAAAGTTAATAT+TGG 0.312504 5_1:-46131296 Msa0733140:three_prime_UTR
CTTTCATGTGGGAATTGTTT+GGG 0.321717 5_1:-46135202 Msa0733140:CDS
TAACCCCAGTATCATAAATA+AGG 0.322142 5_1:+46135042 None:intergenic
GGGAGGTGTGGTGGAAGAAA+TGG 0.331125 5_1:+46140310 None:intergenic
GCTTTCATGTGGGAATTGTT+TGG 0.333698 5_1:-46135203 Msa0733140:CDS
AGCCATAAACAGGGAGAAAT+AGG 0.337266 5_1:+46135469 None:intergenic
ATTGGTTATGCTGCTGATAT+TGG 0.338463 5_1:-46139906 Msa0733140:CDS
GAGAGGAAAACTCAAGAATA+AGG 0.352281 5_1:+46131775 None:intergenic
GGACCACTATTGCCAGATTC+AGG 0.364066 5_1:+46134303 None:intergenic
TTATGCTCTTTGATACTGAT+TGG 0.365791 5_1:-46135103 Msa0733140:CDS
AACATTCTTGGCTATGCAAC+TGG 0.369672 5_1:-46135440 Msa0733140:CDS
GGGTTTGTTGGAGTGGGATT+CGG 0.372012 5_1:+46140263 None:intergenic
CGTGATGCCGAATCTGGATT+GGG 0.375575 5_1:+46140289 None:intergenic
TTCTCCCTGTTTATGGCTGT+TGG 0.376134 5_1:-46135464 Msa0733140:CDS
GAGGTGTGGTGGAAGAAATG+GGG 0.379812 5_1:+46140312 None:intergenic
GGAGGTGTGGTGGAAGAAAT+GGG 0.380209 5_1:+46140311 None:intergenic
TGTTACCAACAGCCATAAAC+AGG 0.381085 5_1:+46135459 None:intergenic
GGAGAAGGGGCAGGAGAGTC+GGG 0.382677 5_1:-46135239 Msa0733140:CDS
ATGGTCGGGTTCTGGACCGG+TGG 0.383535 5_1:+46140240 None:intergenic
ATCAATGGGTGTCCTGAATC+TGG 0.384386 5_1:-46134315 Msa0733140:CDS
TCATAAATAAGGCCTCCTTC+TGG 0.386901 5_1:+46135053 None:intergenic
AATGATACTCTTGATGTCTA+AGG 0.391692 5_1:-46131510 Msa0733140:three_prime_UTR
ACGGTCTCCGACGGCCGAAC+CGG 0.395955 5_1:+46139973 None:intergenic
ACAGCTGCCACGGCAAAGGC+TGG 0.399190 5_1:+46131976 None:intergenic
GCTGTAAAGCCCAACCGAAT+TGG 0.400189 5_1:+46140129 None:intergenic
ACTCGGCAATAACTCGTCTT+TGG 0.401113 5_1:+46131258 None:intergenic
TAGCAATCTTTACCGTTCTT+GGG 0.404261 5_1:-46134794 Msa0733140:CDS
TGCAACAGCTGCCACGGCAA+AGG 0.405737 5_1:+46131972 None:intergenic
ATGCCGCGGGAATGTATGTT+GGG 0.407742 5_1:-46131328 Msa0733140:three_prime_UTR
GACCGATGCTCCAGCCGGTT+CGG 0.411026 5_1:-46139987 Msa0733140:CDS
GCTGCCCCACTTGAACTTAG+AGG 0.414784 5_1:+46135269 None:intergenic
ATAAATGGGCGAGCATCATC+TGG 0.415033 5_1:-46140064 Msa0733140:CDS
GTCGGGTTCTGGACCGGTGG+GGG 0.415330 5_1:+46140243 None:intergenic
GATCCCACGGTCCACTTCCC+AGG 0.415426 5_1:+46132022 None:intergenic
TGGCTCTGTGGACCGGTCTC+CGG 0.418697 5_1:-46140044 Msa0733140:CDS
TAAACAGATTGTGGTGTCCC+TGG 0.419155 5_1:-46132040 Msa0733140:intron
AGGTGTGGTGGAAGAAATGG+GGG 0.420077 5_1:+46140313 None:intergenic
GGAGGTGCCAATATTAACTT+TGG 0.422124 5_1:+46131289 None:intergenic
AAACCACGAGTGACATTTAC+GGG 0.424115 5_1:-46131548 Msa0733140:three_prime_UTR
GCTCTTTGATACTGATTGGA+TGG 0.424729 5_1:-46135099 Msa0733140:CDS
TGCGTTGAAATTAAGGCATA+TGG 0.428433 5_1:+46134451 None:intergenic
AAAACCACGAGTGACATTTA+CGG 0.429692 5_1:-46131549 Msa0733140:three_prime_UTR
CTCGGAGGAGTTGGCGTAAG+GGG 0.433236 5_1:+46140174 None:intergenic
TGGTCGGGTTCTGGACCGGT+GGG 0.438819 5_1:+46140241 None:intergenic
TAAGAGAAACTTACTGCCAT+TGG 0.439735 5_1:+46134768 None:intergenic
TTATGATACTGGGGTTAGAA+TGG 0.440367 5_1:-46135036 Msa0733140:CDS
GGTCGGGTTCTGGACCGGTG+GGG 0.440766 5_1:+46140242 None:intergenic
AACCTCCCGTCCGGTCCAAC+CGG 0.441375 5_1:-46140210 Msa0733140:CDS
GAGCCAGGAGTCCACTCAAA+AGG 0.444099 5_1:+46131947 None:intergenic
ATGATGCTCGCCCATTTATG+AGG 0.445705 5_1:+46140068 None:intergenic
TCGCTTAAATGACCGACTAA+TGG 0.449607 5_1:+46140008 None:intergenic
GGCCGAACCGGCTGGAGCAT+CGG 0.452939 5_1:+46139985 None:intergenic
AACTCGTCTTTGGTGGGAAA+AGG 0.455029 5_1:+46131268 None:intergenic
GGGGCAGCACATGCTGGAGA+AGG 0.457685 5_1:-46135254 Msa0733140:CDS
GACTCGGAGGAGTTGGCGTA+AGG 0.458682 5_1:+46140172 None:intergenic
GAGGGATGATGAAAATGAAC+AGG 0.461049 5_1:-46131832 Msa0733140:three_prime_UTR
TATGATACTGGGGTTAGAAT+GGG 0.462693 5_1:-46135035 Msa0733140:CDS
TGATACTGATTGGATGGGTC+GGG 0.463012 5_1:-46135093 Msa0733140:CDS
TGGATGGTCGGGTTCTGGAC+CGG 0.469636 5_1:+46140237 None:intergenic
GGGAGGTTGATGTGGATGGT+CGG 0.472821 5_1:+46140225 None:intergenic
CGTGGTTGAACCGGTTGGAC+CGG 0.476180 5_1:+46140200 None:intergenic
TCTCCGACGGCCGAACCGGC+TGG 0.476813 5_1:+46139977 None:intergenic
GGGCAGCACATGCTGGAGAA+GGG 0.481642 5_1:-46135253 Msa0733140:CDS
CTATGCAGAAAGCGAGGGGC+TGG 0.484432 5_1:-46134951 Msa0733140:CDS
GTAGCAAGCGGAATCCAATT+CGG 0.485785 5_1:-46140143 Msa0733140:CDS
CATCATCTGGCTCTGTGGAC+CGG 0.487042 5_1:-46140051 Msa0733140:CDS
TTTAAAATGTAAAGGCTGGT+TGG 0.489915 5_1:-46131578 Msa0733140:three_prime_UTR
CATATCGAACCATTGGGACT+TGG 0.490276 5_1:-46134430 Msa0733140:CDS
ACTCGGTATCCCTCATAAAT+GGG 0.492148 5_1:-46140078 Msa0733140:CDS
TGTCCTGAATCTGGCAATAG+TGG 0.494411 5_1:-46134306 Msa0733140:CDS
TTCAACGCATATCGAACCAT+TGG 0.494722 5_1:-46134437 Msa0733140:CDS
TCGTGATGCCGAATCTGGAT+TGG 0.494807 5_1:+46140288 None:intergenic
AAGCCTAGAGTCCGCATATG+AGG 0.496869 5_1:-46131895 Msa0733140:exon
TGGAGTAACATCATTGCTCA+TGG 0.497037 5_1:-46134979 Msa0733140:CDS
GGGGTTAGAATGGGAGCACT+TGG 0.498736 5_1:-46135026 Msa0733140:CDS
ACACCTCCCCAATCCAGATT+CGG 0.500164 5_1:-46140296 Msa0733140:five_prime_UTR
TCAAGTGGGGCAGCACATGC+TGG 0.502696 5_1:-46135260 Msa0733140:CDS
ATACCTCATATGCGGACTCT+AGG 0.503431 5_1:+46131892 None:intergenic
GCCGCGCCGACTAAAATAAA+CGG 0.503797 5_1:+46139954 None:intergenic
AAGGGCTGCAACAGCTGCCA+CGG 0.503946 5_1:+46131966 None:intergenic
GTGCTTACAGGGTTATCAAT+GGG 0.504656 5_1:-46134329 Msa0733140:intron
ACATTTACGGGCTGTAAGGA+AGG 0.505928 5_1:-46131536 Msa0733140:three_prime_UTR
GGCAGGAGAGTCGGGTAGTG+CGG 0.507782 5_1:-46135231 Msa0733140:CDS
CGGCAATAACTCGTCTTTGG+TGG 0.507985 5_1:+46131261 None:intergenic
GGAGGTTGATGTGGATGGTC+GGG 0.508059 5_1:+46140226 None:intergenic
CTCTTTGATACTGATTGGAT+GGG 0.508675 5_1:-46135098 Msa0733140:CDS
TTAGAAATCGAGTGGGAGGT+TGG 0.508964 5_1:+46131743 None:intergenic
TGGAGAAGGGGCAGGAGAGT+CGG 0.510389 5_1:-46135240 Msa0733140:CDS
TTGATACTGATTGGATGGGT+CGG 0.510660 5_1:-46135094 Msa0733140:CDS
TCAGTGCTATCATGATGGTT+TGG 0.511155 5_1:-46131181 Msa0733140:intron
AAGCGGAATCCAATTCGGTT+GGG 0.512758 5_1:-46140138 Msa0733140:CDS
AAAGCTCAACCACCACCAAC+GGG 0.513513 5_1:-46134834 Msa0733140:CDS
GAGGCCTTATTTATGATACT+GGG 0.513871 5_1:-46135046 Msa0733140:CDS
AGTGACATTTACGGGCTGTA+AGG 0.515201 5_1:-46131540 Msa0733140:three_prime_UTR
GAATTGGATTCCGCTTGCTA+CGG 0.515550 5_1:+46140145 None:intergenic
GTAACTGCTCTGACATGGAT+TGG 0.516974 5_1:-46135137 Msa0733140:CDS
ACTCGGAGGAGTTGGCGTAA+GGG 0.517905 5_1:+46140173 None:intergenic
GATGCCGCGGGAATGTATGT+TGG 0.518796 5_1:-46131329 Msa0733140:three_prime_UTR
TAATGGTTGGACGAATAAAC+CGG 0.519411 5_1:+46140025 None:intergenic
GGTGCTTACAGGGTTATCAA+TGG 0.520157 5_1:-46134330 Msa0733140:intron
GGGTTCGTGGTTGAACCGGT+TGG 0.520346 5_1:+46140195 None:intergenic
ATCCACATCAACCTCCCGTC+CGG 0.521924 5_1:-46140219 Msa0733140:CDS
TCAACGCATATCGAACCATT+GGG 0.524707 5_1:-46134436 Msa0733140:CDS
GACCGGACGGGAGGTTGATG+TGG 0.525016 5_1:+46140217 None:intergenic
CGGATGCGACTCGGAGGAGT+TGG 0.525271 5_1:+46140165 None:intergenic
TGTGGTGATGTGAGAGATGA+AGG 0.525274 5_1:+46140378 None:intergenic
CAAGCGGAATCCAATTCGGT+TGG 0.525380 5_1:-46140139 Msa0733140:CDS
GCTCCAGCCGGTTCGGCCGT+CGG 0.525394 5_1:-46139980 Msa0733140:CDS
CTGCTCTGACATGGATTGGA+TGG 0.527387 5_1:-46135133 Msa0733140:CDS
ATACCGAGTTGTTGAACGTA+AGG 0.527684 5_1:+46140092 None:intergenic
GCTGATATTGGTTACTTGAT+CGG 0.528462 5_1:-46139894 Msa0733140:CDS
GCACATGCTGGAGAAGGGGC+AGG 0.528935 5_1:-46135248 Msa0733140:CDS
TCTGCGTTCTTTCTCGACGT+TGG 0.529055 5_1:-46135341 Msa0733140:CDS
TACCGTTCTTGGGTTTCCAA+TGG 0.529731 5_1:-46134784 Msa0733140:CDS
AGCCAGGAGTCCACTCAAAA+GGG 0.530946 5_1:+46131948 None:intergenic
TCCGACACAAATTACAATGA+TGG 0.532547 5_1:+46131368 None:intergenic
TCTGGATTGGGGAGGTGTGG+TGG 0.535908 5_1:+46140301 None:intergenic
GGCAATAACTCGTCTTTGGT+GGG 0.536358 5_1:+46131262 None:intergenic
CGCTTGCTACGGATGCGACT+CGG 0.536678 5_1:+46140156 None:intergenic
ACCTATGCGGCAAATAGCAT+TGG 0.537882 5_1:-46134867 Msa0733140:CDS
CCGTGGGATCAATTATTTGG+TGG 0.538344 5_1:-46132009 Msa0733140:CDS
ATCACAACGCCCGTTGGTGG+TGG 0.539816 5_1:+46134825 None:intergenic
CAGTATCAAAGAGCATAAAT+GGG 0.540629 5_1:+46135108 None:intergenic
GTCCCTGGGAAGTGGACCGT+GGG 0.543243 5_1:-46132025 Msa0733140:CDS
TCTGTTTAAAATGTAAAGGC+TGG 0.543527 5_1:-46131582 Msa0733140:three_prime_UTR
TGGGATCAATTATTTGGTGG+AGG 0.543862 5_1:-46132006 Msa0733140:CDS
ACCATCATTGTAATTTGTGT+CGG 0.545032 5_1:-46131369 Msa0733140:three_prime_UTR
CATTTACGGGCTGTAAGGAA+GGG 0.545406 5_1:-46131535 Msa0733140:three_prime_UTR
AAACAGATTGTGGTGTCCCT+GGG 0.547208 5_1:-46132039 Msa0733140:intron
GTTGAACCGGTTGGACCGGA+CGG 0.551213 5_1:+46140204 None:intergenic
GGCAGCACATGCTGGAGAAG+GGG 0.553182 5_1:-46135252 Msa0733140:CDS
GAACCATTGGGACTTGGCCA+AGG 0.554326 5_1:-46134424 Msa0733140:intron
CAACTGGATCATACAGTGGC+TGG 0.554996 5_1:-46135424 Msa0733140:CDS
TTGAACCGGTTGGACCGGAC+GGG 0.555013 5_1:+46140205 None:intergenic
CGAGTTTGAATCATTCCACA+TGG 0.555388 5_1:-46131240 Msa0733140:three_prime_UTR
GATGTCTGTTTAAAATGTAA+AGG 0.556083 5_1:-46131586 Msa0733140:three_prime_UTR
ATTGTGGTGTCCCTGGGAAG+TGG 0.556232 5_1:-46132033 Msa0733140:CDS
ATTTACGGGCTGTAAGGAAG+GGG 0.556243 5_1:-46131534 Msa0733140:three_prime_UTR
GCGATCACAACGCCCGTTGG+TGG 0.557691 5_1:+46134822 None:intergenic
GGACGGGAGGTTGATGTGGA+TGG 0.558133 5_1:+46140221 None:intergenic
ACAGACAGTACTATCCATAC+AGG 0.560631 5_1:+46135158 None:intergenic
TAAAGCTCAACCACCACCAA+CGG 0.563419 5_1:-46134835 Msa0733140:CDS
GCCAATGCTATTTGCCGCAT+AGG 0.563889 5_1:+46134866 None:intergenic
TAAGCGACCGATGCTCCAGC+CGG 0.564919 5_1:-46139992 Msa0733140:CDS
GGGGAATAGCTAATAGAGCC+AGG 0.565079 5_1:+46131932 None:intergenic
TGTCCCTGGGAAGTGGACCG+TGG 0.569972 5_1:-46132026 Msa0733140:CDS
TTCATTAGAAATCGAGTGGG+AGG 0.572724 5_1:+46131739 None:intergenic
ACCCCTTACGTTCAACAACT+CGG 0.572745 5_1:-46140095 Msa0733140:CDS
TCGGAGGAGTTGGCGTAAGG+GGG 0.573508 5_1:+46140175 None:intergenic
TTTATTCATTAGAAATCGAG+TGG 0.575640 5_1:+46131735 None:intergenic
CATGTGGAATGATTCAAACT+CGG 0.578216 5_1:+46131241 None:intergenic
GTGTGGTGGAAGAAATGGGG+GGG 0.578682 5_1:+46140315 None:intergenic
CTAAAATAAACGGTCTCCGA+CGG 0.579569 5_1:+46139964 None:intergenic
GTTGCTAATAATGTTACTCA+AGG 0.583205 5_1:-46139801 Msa0733140:CDS
AACCGGTTGGACCGGACGGG+AGG 0.583824 5_1:+46140208 None:intergenic
ACCGAGTTGTTGAACGTAAG+GGG 0.585817 5_1:+46140094 None:intergenic
TCTGGCAATAGTGGTCCCGC+AGG 0.586235 5_1:-46134297 Msa0733140:intron
TACCGAGTTGTTGAACGTAA+GGG 0.586732 5_1:+46140093 None:intergenic
GAAGTGCCTCTAAGTTCAAG+TGG 0.587282 5_1:-46135275 Msa0733140:CDS
CCACCTTGGCCAAGTCCCAA+TGG 0.587430 5_1:+46134421 None:intergenic
GTGCATCAGTGCTATCATGA+TGG 0.589541 5_1:-46131186 Msa0733140:intron
TCGTCTTTGGTGGGAAAAGG+AGG 0.590218 5_1:+46131271 None:intergenic
TGTCTGTAACTGCTCTGACA+TGG 0.591644 5_1:-46135142 Msa0733140:CDS
GAATCTGGATTGGGGAGGTG+TGG 0.592420 5_1:+46140298 None:intergenic
ATCCCACGGTCCACTTCCCA+GGG 0.593989 5_1:+46132023 None:intergenic
CCACCAAATAATTGATCCCA+CGG 0.594093 5_1:+46132009 None:intergenic
AGTGGGAGGTTGGAATCTTG+AGG 0.596967 5_1:+46131753 None:intergenic
TGGACGAATAAACCGGAGAC+CGG 0.608284 5_1:+46140032 None:intergenic
TGATGCTCGCCCATTTATGA+GGG 0.611044 5_1:+46140069 None:intergenic
TAACATCATTGCTCATGGAA+AGG 0.611471 5_1:-46134974 Msa0733140:CDS
GGTGTGGTGGAAGAAATGGG+GGG 0.612462 5_1:+46140314 None:intergenic
AAAGGCTATGCAGAAAGCGA+GGG 0.612933 5_1:-46134956 Msa0733140:CDS
TTAAATGACCGACTAATGGT+TGG 0.616533 5_1:+46140012 None:intergenic
GCGAGCATCATCTGGCTCTG+TGG 0.619712 5_1:-46140056 Msa0733140:CDS
GAGGTTGGAATCTTGAGGAG+AGG 0.620202 5_1:+46131758 None:intergenic
TTTGTGTGAGATGGAAGCAA+AGG 0.620212 5_1:+46140347 None:intergenic
AGCATAACCAATTATAACAA+CGG 0.620472 5_1:+46139917 None:intergenic
AAGTGCCTCTAAGTTCAAGT+GGG 0.621563 5_1:-46135274 Msa0733140:CDS
GAAAGGCTATGCAGAAAGCG+AGG 0.622037 5_1:-46134957 Msa0733140:CDS
ATATTAAGGCTAGATGCCGC+GGG 0.625898 5_1:-46131341 Msa0733140:three_prime_UTR
TATATTAAGGCTAGATGCCG+CGG 0.626112 5_1:-46131342 Msa0733140:three_prime_UTR
GTGTGAGATGGAAGCAAAGG+TGG 0.629470 5_1:+46140350 None:intergenic
TGCCATTGGAAACCCAAGAA+CGG 0.631462 5_1:+46134782 None:intergenic
GTGCGGAAGAAGCTTTCATG+TGG 0.631502 5_1:-46135214 Msa0733140:CDS
TTATTCGTCCAACCATTAGT+CGG 0.631856 5_1:-46140020 Msa0733140:CDS
ATGGGTCGGGAAATTTATGG+TGG 0.634506 5_1:-46135080 Msa0733140:CDS
GCTGCGATCACAACGCCCGT+TGG 0.635197 5_1:+46134819 None:intergenic
TTATTCATTAGAAATCGAGT+GGG 0.638960 5_1:+46131736 None:intergenic
GCACAACTAATAGAGCAAGC+AGG 0.640662 5_1:+46135374 None:intergenic
GTGATGTGAGAGATGAAGGA+AGG 0.644641 5_1:+46140382 None:intergenic
TCTCGACGTTGGTTTCATTG+CGG 0.646278 5_1:-46135330 Msa0733140:CDS
AAACTCTCCAGCCTTTGCCG+TGG 0.646555 5_1:-46131983 Msa0733140:CDS
TCAGCGAGTAAAGCTCTACA+AGG 0.649910 5_1:+46139777 None:intergenic
AGGCCTTATTTATGATACTG+GGG 0.650258 5_1:-46135045 Msa0733140:CDS
TGCCGCGGGAATGTATGTTG+GGG 0.651808 5_1:-46131327 Msa0733140:three_prime_UTR
GTGATGCCGAATCTGGATTG+GGG 0.653748 5_1:+46140290 None:intergenic
AGCATATGATACCTCATATG+CGG 0.658323 5_1:+46131884 None:intergenic
TGTTAGGCAATGATGCTCGA+AGG 0.658533 5_1:-46135508 Msa0733140:intron
ATTTATGGTGGTGATCCAGA+AGG 0.660702 5_1:-46135068 Msa0733140:CDS
TGCGGAAGAAGCTTTCATGT+GGG 0.664559 5_1:-46135213 Msa0733140:CDS
TATGGTGGTGATCCAGAAGG+AGG 0.664668 5_1:-46135065 Msa0733140:CDS
TTTACGGGCTGTAAGGAAGG+GGG 0.666139 5_1:-46131533 Msa0733140:three_prime_UTR
AAGGCTATGCAGAAAGCGAG+GGG 0.666268 5_1:-46134955 Msa0733140:CDS
CGAGTCGCATCCGTAGCAAG+CGG 0.668803 5_1:-46140155 Msa0733140:CDS
AACCAATTATAACAACGGCA+AGG 0.669403 5_1:+46139922 None:intergenic
CAGCCCGTAAATGTCACTCG+TGG 0.672669 5_1:+46131545 None:intergenic
AATGTTAGTATTAACCTATG+CGG 0.677893 5_1:-46134880 Msa0733140:CDS
TGCCCCAACATACATTCCCG+CGG 0.686730 5_1:+46131325 None:intergenic
AGATGGAAGCAAAGGTGGTG+CGG 0.696523 5_1:+46140355 None:intergenic
ATGCCGAATCTGGATTGGGG+AGG 0.696887 5_1:+46140293 None:intergenic
GAAGCAAAGGTGGTGCGGTG+TGG 0.699528 5_1:+46140360 None:intergenic
TTGCTACGGATGCGACTCGG+AGG 0.701214 5_1:+46140159 None:intergenic
GTTACCAACAGCCATAAACA+GGG 0.716551 5_1:+46135460 None:intergenic
AGTGCCTCTAAGTTCAAGTG+GGG 0.719331 5_1:-46135273 Msa0733140:CDS
TATGCAACTGGATCATACAG+TGG 0.742045 5_1:-46135428 Msa0733140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTAAATTTTTTTTTTG+TGG - chr5_1:46132416-46132435 Msa0733140:intron 10.0%
!!! TTTTGAATTTTTTAGTTTTT+GGG + chr5_1:46133493-46133512 None:intergenic 10.0%
!!! TATTTTTAAAATTACAGTTT+TGG + chr5_1:46133522-46133541 None:intergenic 10.0%
!!! AACATATTCATTTTTTAAAA+AGG + chr5_1:46133658-46133677 None:intergenic 10.0%
!!! TTTTTAAAAAATGAATATGT+TGG - chr5_1:46133657-46133676 Msa0733140:intron 10.0%
!!! TTTAGGATAAATATAAATAA+AGG + chr5_1:46134439-46134458 None:intergenic 10.0%
!!! TAATTTATTTTTAATTAAGC+TGG + chr5_1:46135462-46135481 None:intergenic 10.0%
!! TTATTATTAACTGATAATTA+AGG - chr5_1:46137932-46137951 Msa0733140:intron 10.0%
!! AATAAAAAATAAAGAATTGT+TGG - chr5_1:46138196-46138215 Msa0733140:intron 10.0%
!!! TTTCATTTTAATCTTTTAAT+TGG + chr5_1:46139044-46139063 None:intergenic 10.0%
!! TATTGTATTATTGATAAAGT+TGG - chr5_1:46131924-46131943 Msa0733140:CDS 15.0%
!! TTTACTAAAAATAGTGAATT+TGG - chr5_1:46132095-46132114 Msa0733140:intron 15.0%
!!! TTTAAATTTTTTTTTTGTGG+TGG - chr5_1:46132419-46132438 Msa0733140:intron 15.0%
!! AAAAAACTAAAACATGTAAA+AGG + chr5_1:46133467-46133486 None:intergenic 15.0%
!!! GTTTTGAATTTTTTAGTTTT+TGG + chr5_1:46133494-46133513 None:intergenic 15.0%
!!! AAAAACTAAAAAAGAGTTTT+TGG - chr5_1:46133561-46133580 Msa0733140:intron 15.0%
!!! AAAACTAAAAAAGAGTTTTT+GGG - chr5_1:46133562-46133581 Msa0733140:intron 15.0%
!! TAACAAAATAAAAATTGGTT+TGG + chr5_1:46133918-46133937 None:intergenic 15.0%
!! AGAATAGTATAAACTTAAAA+CGG + chr5_1:46134067-46134086 None:intergenic 15.0%
!!! TTTAAGTTTATACTATTCTT+AGG - chr5_1:46134068-46134087 Msa0733140:intron 15.0%
!! ATAGAGATATATAAGTAAAA+AGG - chr5_1:46134757-46134776 Msa0733140:intron 15.0%
!! TAGAGATATATAAGTAAAAA+GGG - chr5_1:46134758-46134777 Msa0733140:intron 15.0%
!!! ATTATTTATTCTTGTCATTT+TGG + chr5_1:46135820-46135839 None:intergenic 15.0%
!! AATGACAAGAATAAATAATT+CGG - chr5_1:46135821-46135840 Msa0733140:intron 15.0%
!!! TAAATGTATTGTTTTTATGT+TGG - chr5_1:46135940-46135959 Msa0733140:intron 15.0%
!! TAATACTAAAAACCTATAAA+TGG - chr5_1:46138897-46138916 Msa0733140:intron 15.0%
!! CTAATGAATAAATGAAATAT+TGG - chr5_1:46139835-46139854 Msa0733140:CDS 15.0%
!!! AAATAAATAAATTTTCCATG+TGG + chr5_1:46140337-46140356 None:intergenic 15.0%
!!! GTGACTTTTTACTTTATTTA+GGG - chr5_1:46132821-46132840 Msa0733140:intron 20.0%
!! AAGAAAAATAGAACTATTTC+AGG + chr5_1:46133181-46133200 None:intergenic 20.0%
!!! AGTTCTATTTTTCTTTTGTT+AGG - chr5_1:46133186-46133205 Msa0733140:intron 20.0%
!!! AATTTTGCGCAAAATTTTTT+CGG - chr5_1:46133295-46133314 Msa0733140:intron 20.0%
!! TTTAGAAGATTCGAATAAAT+TGG - chr5_1:46133365-46133384 Msa0733140:intron 20.0%
!! AAACAAAAACTATTTCAAAC+AGG + chr5_1:46133402-46133421 None:intergenic 20.0%
!! TAATTATGACATTTGTTTGT+AGG - chr5_1:46133852-46133871 Msa0733140:intron 20.0%
!!! ACTTTTAGATTAGTTTGATA+TGG - chr5_1:46134174-46134193 Msa0733140:intron 20.0%
!!! GGAATGTTATCTTATTTTAA+AGG - chr5_1:46134342-46134361 Msa0733140:intron 20.0%
!!! TGTTATCTTATTTTAAAGGT+CGG - chr5_1:46134346-46134365 Msa0733140:intron 20.0%
!! ATATCTCTATATTTCACAAA+TGG + chr5_1:46134747-46134766 None:intergenic 20.0%
!! TCTTTCTTCTTATAAATGTT+AGG - chr5_1:46136035-46136054 Msa0733140:intron 20.0%
!! TGACTAAAAGACTAATTATT+TGG - chr5_1:46137200-46137219 Msa0733140:intron 20.0%
!! ACAATTTACATAAATCATTG+AGG - chr5_1:46137456-46137475 Msa0733140:intron 20.0%
!!! TCAGTTCAATTATTTGTTAA+GGG + chr5_1:46137879-46137898 None:intergenic 20.0%
!!! ATCAGTTCAATTATTTGTTA+AGG + chr5_1:46137880-46137899 None:intergenic 20.0%
!! AATAATAATTTGGTACAGTT+TGG + chr5_1:46137914-46137933 None:intergenic 20.0%
!!! AATAACAGATTTTCAGTTAT+GGG + chr5_1:46138424-46138443 None:intergenic 20.0%
!!! TAATAACAGATTTTCAGTTA+TGG + chr5_1:46138425-46138444 None:intergenic 20.0%
!! TGAAAATCTGTTATTACTTA+TGG - chr5_1:46138429-46138448 Msa0733140:intron 20.0%
!! TATAAATAGTAAACCAATGT+TGG - chr5_1:46139234-46139253 Msa0733140:intron 20.0%
!! AATAGTAACACTCAAAAATA+AGG + chr5_1:46139900-46139919 None:intergenic 20.0%
!! ATATGTTCCAAAGTTAATAT+TGG - chr5_1:46140263-46140282 Msa0733140:CDS 20.0%
!! TGGAAAATTTATTTATTTCC+AGG - chr5_1:46140339-46140358 Msa0733140:five_prime_UTR 20.0%
! AGCATAACCAATTATAACAA+CGG + chr5_1:46131645-46131664 None:intergenic 25.0%
! ACAAAAACAACTATAGCAAA+AGG + chr5_1:46131716-46131735 None:intergenic 25.0%
!!! CTATAGTTGTTTTTGTGATT+GGG - chr5_1:46131720-46131739 Msa0733140:three_prime_UTR 25.0%
!! TTGTTGACTATAGAATTTGT+TGG - chr5_1:46131998-46132017 Msa0733140:CDS 25.0%
! AATCAATAACTCTTCATACA+CGG + chr5_1:46132030-46132049 None:intergenic 25.0%
!!! ACTATTTTAGTTCATGTGTT+TGG - chr5_1:46132174-46132193 Msa0733140:intron 25.0%
! ACAATGCATAAAATATGCAA+AGG + chr5_1:46132464-46132483 None:intergenic 25.0%
! ATTATCCATTATCAATGGTA+CGG + chr5_1:46132567-46132586 None:intergenic 25.0%
! ATGAGATTATCCATTATCAA+TGG + chr5_1:46132572-46132591 None:intergenic 25.0%
! TTGTCCAAATGACTTATAAT+TGG - chr5_1:46132681-46132700 Msa0733140:intron 25.0%
! TGTCCAAATGACTTATAATT+GGG - chr5_1:46132682-46132701 Msa0733140:intron 25.0%
! AAATAAAGTAAAAAGTCACG+TGG + chr5_1:46132820-46132839 None:intergenic 25.0%
!!! CGTGACTTTTTACTTTATTT+AGG - chr5_1:46132820-46132839 Msa0733140:intron 25.0%
!! CTTTTGTGTGTAAACTTAAA+AGG - chr5_1:46132880-46132899 Msa0733140:intron 25.0%
! TTAGTAGTGTTCTCAAATAT+CGG - chr5_1:46132938-46132957 Msa0733140:intron 25.0%
!! TCTTTTGTTAGGTTATGATA+TGG - chr5_1:46133197-46133216 Msa0733140:intron 25.0%
! AATCTCATTGTTGAGTATTT+AGG - chr5_1:46133255-46133274 Msa0733140:intron 25.0%
! ATCTCATTGTTGAGTATTTA+GGG - chr5_1:46133256-46133275 Msa0733140:intron 25.0%
! TTCGAATCTTCTAAATCATA+GGG + chr5_1:46133360-46133379 None:intergenic 25.0%
! ATTCGAATCTTCTAAATCAT+AGG + chr5_1:46133361-46133380 None:intergenic 25.0%
! AAGATAACTATACATGATGA+GGG + chr5_1:46133745-46133764 None:intergenic 25.0%
! AAAGATAACTATACATGATG+AGG + chr5_1:46133746-46133765 None:intergenic 25.0%
! TATAGTTATCTTTGTTCAGT+AGG - chr5_1:46133753-46133772 Msa0733140:intron 25.0%
!!! TTAGAGAAGTTTTTTAGTCA+TGG - chr5_1:46133800-46133819 Msa0733140:intron 25.0%
!! TACTTTTAGCATGAGATTAT+TGG - chr5_1:46134227-46134246 Msa0733140:intron 25.0%
!! ACTTTTAGCATGAGATTATT+GGG - chr5_1:46134228-46134247 Msa0733140:intron 25.0%
!! CCAATGAGAGATTTTATATA+CGG + chr5_1:46134276-46134295 None:intergenic 25.0%
! ATATAAAATCTCTCATTGGA+TGG - chr5_1:46134277-46134296 Msa0733140:intron 25.0%
! AGGAAATAGAATTATTCCAA+TGG + chr5_1:46134419-46134438 None:intergenic 25.0%
! AGATATATAAGTAAAAAGGG+AGG - chr5_1:46134761-46134780 Msa0733140:intron 25.0%
! GATATATAAGTAAAAAGGGA+GGG - chr5_1:46134762-46134781 Msa0733140:intron 25.0%
! ATATATAAGTAAAAAGGGAG+GGG - chr5_1:46134763-46134782 Msa0733140:intron 25.0%
!! TTAAATACATGCCTTTTGAA+GGG + chr5_1:46135439-46135458 None:intergenic 25.0%
! TTAAGAAAAAGGAAAGAAGA+GGG + chr5_1:46136014-46136033 None:intergenic 25.0%
! AGAAGAAAGAGTTAAGAAAA+AGG + chr5_1:46136025-46136044 None:intergenic 25.0%
!!! AATATTTTTCAATGCCTGTA+TGG - chr5_1:46136387-46136406 Msa0733140:intron 25.0%
! AATGTTAGTATTAACCTATG+CGG - chr5_1:46136679-46136698 Msa0733140:intron 25.0%
!! AATTTGAGATTCAGTTTCAA+TGG + chr5_1:46136820-46136839 None:intergenic 25.0%
! TTAACAAAATGCACATGTAT+TGG + chr5_1:46136876-46136895 None:intergenic 25.0%
!! TTAAATAACTAACTTGTACG+TGG - chr5_1:46136896-46136915 Msa0733140:intron 25.0%
!!! AGTCTTCTTTAACTTACTTT+TGG - chr5_1:46136948-46136967 Msa0733140:intron 25.0%
!!! GTCTTCTTTAACTTACTTTT+GGG - chr5_1:46136949-46136968 Msa0733140:intron 25.0%
! TCTTCAAGAAAGAATAAACA+AGG + chr5_1:46137178-46137197 None:intergenic 25.0%
! AGACTAATTATTTGGATTCT+CGG - chr5_1:46137208-46137227 Msa0733140:intron 25.0%
! AATTCCTTCTATTCTACATA+TGG - chr5_1:46137299-46137318 Msa0733140:intron 25.0%
!!! TTAAACTACGTTTTAGAGAA+TGG - chr5_1:46137670-46137689 Msa0733140:intron 25.0%
!! CAGTTCAATTATTTGTTAAG+GGG + chr5_1:46137878-46137897 None:intergenic 25.0%
!!! AATGAATAGTTCTTGGTTTT+TGG + chr5_1:46137972-46137991 None:intergenic 25.0%
! ATTGTGTTGCAATGAAATAT+TGG + chr5_1:46138088-46138107 None:intergenic 25.0%
! TCTGTGTTATCAATTAAGAA+TGG + chr5_1:46138120-46138139 None:intergenic 25.0%
! ATCAATAGATAGAAGATGAT+AGG - chr5_1:46138146-46138165 Msa0733140:intron 25.0%
! AATAAAACAAATCTACACAC+AGG - chr5_1:46138364-46138383 Msa0733140:intron 25.0%
! ATAAAACAAATCTACACACA+GGG - chr5_1:46138365-46138384 Msa0733140:intron 25.0%
!!! ATTTTTTTATTTCCACCTTG+AGG + chr5_1:46138632-46138651 None:intergenic 25.0%
! GAGAATAATGAATAACTCAA+GGG + chr5_1:46138658-46138677 None:intergenic 25.0%
! TATGTATGTAAGCCATTTAT+AGG + chr5_1:46138912-46138931 None:intergenic 25.0%
! CTGAGAATAAAAATGTTACA+TGG - chr5_1:46139013-46139032 Msa0733140:intron 25.0%
! GAATTATAAAACAGGAATCA+TGG + chr5_1:46139320-46139339 None:intergenic 25.0%
! ATATAGACAAAACTTCGTTT+GGG + chr5_1:46139343-46139362 None:intergenic 25.0%
! TATATAGACAAAACTTCGTT+TGG + chr5_1:46139344-46139363 None:intergenic 25.0%
!!! AGTTTTGTCTATATATCAGT+CGG - chr5_1:46139349-46139368 Msa0733140:intron 25.0%
! ATATAGTTCGAAGTTAATGA+TGG - chr5_1:46139402-46139421 Msa0733140:intron 25.0%
!!! ATCTTGTTTTAAACAGATTG+TGG - chr5_1:46139510-46139529 Msa0733140:intron 25.0%
!!! TATCATATGCTGTTTTCTTT+TGG - chr5_1:46139687-46139706 Msa0733140:intron 25.0%
! TTATTCATTAGAAATCGAGT+GGG + chr5_1:46139826-46139845 None:intergenic 25.0%
! TTTATTCATTAGAAATCGAG+TGG + chr5_1:46139827-46139846 None:intergenic 25.0%
! AAACAGACATCTCAAATTAT+TGG + chr5_1:46139964-46139983 None:intergenic 25.0%
!! GATGTCTGTTTAAAATGTAA+AGG - chr5_1:46139973-46139992 Msa0733140:CDS 25.0%
!! ACTTCTTTTTCCAAATATCT+TGG - chr5_1:46140102-46140121 Msa0733140:CDS 25.0%
! ATACGAAATTCCAAGATATT+TGG + chr5_1:46140115-46140134 None:intergenic 25.0%
! ACACAATGTCAATCATTATT+TGG + chr5_1:46140157-46140176 None:intergenic 25.0%
!!! GCTATAGTTGTTTTTGTGAT+TGG - chr5_1:46131719-46131738 Msa0733140:three_prime_UTR 30.0%
!!! TTGTTTTTGTGATTGGGTTT+TGG - chr5_1:46131726-46131745 Msa0733140:three_prime_UTR 30.0%
GTTGCTAATAATGTTACTCA+AGG - chr5_1:46131758-46131777 Msa0733140:three_prime_UTR 30.0%
!! AGTGAATTTGGTGTTTGATT+TGG - chr5_1:46132107-46132126 Msa0733140:intron 30.0%
!! TGATTTGGAAAGTTGATAGT+TGG - chr5_1:46132122-46132141 Msa0733140:intron 30.0%
TACGTAGATGTATACAAAGA+TGG - chr5_1:46132243-46132262 Msa0733140:intron 30.0%
!!! AATTTTTTTTTTGTGGTGGC+CGG - chr5_1:46132423-46132442 Msa0733140:intron 30.0%
TAGATACACACAAAAGTTAC+AGG - chr5_1:46132521-46132540 Msa0733140:intron 30.0%
TTATCCATTATCAATGGTAC+GGG + chr5_1:46132566-46132585 None:intergenic 30.0%
TGTCCCAATTATAAGTCATT+TGG + chr5_1:46132688-46132707 None:intergenic 30.0%
GAAGATTCGAATAAATTGGA+AGG - chr5_1:46133369-46133388 Msa0733140:intron 30.0%
TCGAATAAATTGGAAGGTTT+AGG - chr5_1:46133375-46133394 Msa0733140:intron 30.0%
CGAATAAATTGGAAGGTTTA+GGG - chr5_1:46133376-46133395 Msa0733140:intron 30.0%
!! AGGCTCTTAGTTTTCTATTT+TGG - chr5_1:46133598-46133617 Msa0733140:intron 30.0%
!! GGCTCTTAGTTTTCTATTTT+GGG - chr5_1:46133599-46133618 Msa0733140:intron 30.0%
!! TCTTAGTTTTCTATTTTGGG+AGG - chr5_1:46133602-46133621 Msa0733140:intron 30.0%
TATGTTGGATCGTATATGAA+AGG - chr5_1:46133672-46133691 Msa0733140:intron 30.0%
AGATAACTATACATGATGAG+GGG + chr5_1:46133744-46133763 None:intergenic 30.0%
! TTTAGGTCTCGTTAAGTTTT+TGG - chr5_1:46133892-46133911 Msa0733140:intron 30.0%
ATAGTTTATATCAGAGTGAG+TGG - chr5_1:46133959-46133978 Msa0733140:intron 30.0%
TAGTTTATATCAGAGTGAGT+GGG - chr5_1:46133960-46133979 Msa0733140:intron 30.0%
AAGGAGAAATGAATTTCCAA+AGG + chr5_1:46134018-46134037 None:intergenic 30.0%
TTATGATGCAAAGAAAAAGC+CGG + chr5_1:46134043-46134062 None:intergenic 30.0%
AGTCTTACACTAGATGTAAT+TGG + chr5_1:46134157-46134176 None:intergenic 30.0%
TAAATGGAATCTAACCAGTT+AGG + chr5_1:46134200-46134219 None:intergenic 30.0%
CTAAAAGTAGACACTGTAAA+TGG + chr5_1:46134216-46134235 None:intergenic 30.0%
CCGTATATAAAATCTCTCAT+TGG - chr5_1:46134273-46134292 Msa0733140:intron 30.0%
TATTGCAGGTGAAAATCTTT+AGG + chr5_1:46134456-46134475 None:intergenic 30.0%
! ATCTATGTTTTTCCTCACAT+TGG + chr5_1:46134536-46134555 None:intergenic 30.0%
TTCATAGACTTCAGTTGTTT+GGG + chr5_1:46134600-46134619 None:intergenic 30.0%
TATATAAGTAAAAAGGGAGG+GGG - chr5_1:46134764-46134783 Msa0733140:intron 30.0%
ACATGTCATTCAAGTATGAA+TGG - chr5_1:46134901-46134920 Msa0733140:CDS 30.0%
TAAAGTTGCATATGGTCTTT+AGG + chr5_1:46134935-46134954 None:intergenic 30.0%
! TTGACTTGATCATAATTAGG+AGG - chr5_1:46135272-46135291 Msa0733140:CDS 30.0%
TGACTTGATCATAATTAGGA+GGG - chr5_1:46135273-46135292 Msa0733140:CDS 30.0%
!! TAAATACATGCCTTTTGAAG+GGG + chr5_1:46135438-46135457 None:intergenic 30.0%
! GTTAAATACATGCCTTTTGA+AGG + chr5_1:46135440-46135459 None:intergenic 30.0%
! TTTTCATCATAACTTTGCCT+TGG - chr5_1:46135592-46135611 Msa0733140:intron 30.0%
! TAGGAAAGGTATGATGAAAA+GGG + chr5_1:46135778-46135797 None:intergenic 30.0%
! TTAGGAAAGGTATGATGAAA+AGG + chr5_1:46135779-46135798 None:intergenic 30.0%
TCATCATACCTTTCCTAATT+TGG - chr5_1:46135781-46135800 Msa0733140:intron 30.0%
TTTGCAAACCAAATTAGGAA+AGG + chr5_1:46135792-46135811 None:intergenic 30.0%
!! TTTCCTAATTTGGTTTGCAA+AGG - chr5_1:46135791-46135810 Msa0733140:intron 30.0%
!! TAATGTGCTTTTATTTGCGA+GGG + chr5_1:46135922-46135941 None:intergenic 30.0%
!! TTAATGTGCTTTTATTTGCG+AGG + chr5_1:46135923-46135942 None:intergenic 30.0%
TAAGAAAAAGGAAAGAAGAG+GGG + chr5_1:46136013-46136032 None:intergenic 30.0%
GTTAAGAAAAAGGAAAGAAG+AGG + chr5_1:46136015-46136034 None:intergenic 30.0%
! CAGTATCAAAGAGCATAAAT+GGG + chr5_1:46136454-46136473 None:intergenic 30.0%
! TCAGTATCAAAGAGCATAAA+TGG + chr5_1:46136455-46136474 None:intergenic 30.0%
TTATGCTCTTTGATACTGAT+TGG - chr5_1:46136456-46136475 Msa0733140:intron 30.0%
TAACCCCAGTATCATAAATA+AGG + chr5_1:46136520-46136539 None:intergenic 30.0%
TTGCTTAATTCAGTTGTTCT+TGG - chr5_1:46136560-46136579 Msa0733140:intron 30.0%
ATAACATGATATGCCTGAAA+TGG - chr5_1:46137001-46137020 Msa0733140:intron 30.0%
! TTCAACTCATTTTCCATTTC+AGG + chr5_1:46137017-46137036 None:intergenic 30.0%
TTCGATATGCGTTGAAATTA+AGG + chr5_1:46137118-46137137 None:intergenic 30.0%
TTCAAAAGAAGAAATACCTG+CGG + chr5_1:46137281-46137300 None:intergenic 30.0%
CTAACCATATGTAGAATAGA+AGG + chr5_1:46137306-46137325 None:intergenic 30.0%
! TGTTGTTTGTATAAACCTAG+TGG - chr5_1:46137345-46137364 Msa0733140:intron 30.0%
! ACGAGTTGACTATGTTAAAA+TGG + chr5_1:46137392-46137411 None:intergenic 30.0%
ATCGAACTGAAATGATATGA+AGG - chr5_1:46137812-46137831 Msa0733140:intron 30.0%
ACTGAAATGATATGAAGGTT+CGG - chr5_1:46137817-46137836 Msa0733140:intron 30.0%
! TGATGGTAATGAATAGTTCT+TGG + chr5_1:46137979-46137998 None:intergenic 30.0%
TGTTGCAATGAAATATTGGA+AGG + chr5_1:46138084-46138103 None:intergenic 30.0%
! ACACGAAAGCATACTAAAAT+TGG - chr5_1:46138293-46138312 Msa0733140:intron 30.0%
!! TTGGCTTTACTAATCTTATG+TGG - chr5_1:46138312-46138331 Msa0733140:intron 30.0%
! TGGCTTTACTAATCTTATGT+GGG - chr5_1:46138313-46138332 Msa0733140:intron 30.0%
TAAGGGTGAATTTGCAAAAA+AGG - chr5_1:46138396-46138415 Msa0733140:intron 30.0%
!!! TCATCCTTTTTTGTAGTAGT+AGG - chr5_1:46138482-46138501 Msa0733140:intron 30.0%
AAGTGAAAAGAAAGTCAAGT+TGG + chr5_1:46138539-46138558 None:intergenic 30.0%
!!! CTTTTCACTTTTTTTCCTTC+TGG - chr5_1:46138549-46138568 Msa0733140:intron 30.0%
GGAGAATAATGAATAACTCA+AGG + chr5_1:46138659-46138678 None:intergenic 30.0%
TTCTTGAACTCTTAGATCAA+TGG + chr5_1:46138712-46138731 None:intergenic 30.0%
ATCTAAGAGTTCAAGAAGTT+AGG - chr5_1:46138715-46138734 Msa0733140:intron 30.0%
TTAGGTCTTAATGAGGTAAT+AGG - chr5_1:46138733-46138752 Msa0733140:intron 30.0%
TAGGTCTTAATGAGGTAATA+GGG - chr5_1:46138734-46138753 Msa0733140:intron 30.0%
TCTCTAAATAGGTTTGAGTA+GGG - chr5_1:46138788-46138807 Msa0733140:intron 30.0%
TGAGAGTCTACATAAATTTG+AGG - chr5_1:46138821-46138840 Msa0733140:intron 30.0%
! AAGTCTACAAATCGATTCTA+TGG + chr5_1:46138853-46138872 None:intergenic 30.0%
TCTAAGTTAATGCCAAAAGA+TGG - chr5_1:46139156-46139175 Msa0733140:intron 30.0%
! ACCAATGTTGGTTACAAAAA+AGG - chr5_1:46139246-46139265 Msa0733140:intron 30.0%
!!! ACCTTTTTTGTAACCAACAT+TGG + chr5_1:46139250-46139269 None:intergenic 30.0%
TATAGACAAAACTTCGTTTG+GGG + chr5_1:46139342-46139361 None:intergenic 30.0%
TACCTCGGAATAATAAACTA+CGG + chr5_1:46139378-46139397 None:intergenic 30.0%
!! GCACTTATTTCTTTTGAAGA+GGG - chr5_1:46139709-46139728 Msa0733140:intron 30.0%
!! TGGCTGTGTTTTTATCTTAT+TGG - chr5_1:46139855-46139874 Msa0733140:CDS 30.0%
! GTTACTATTTTCTGATGCAA+AGG - chr5_1:46139911-46139930 Msa0733140:CDS 30.0%
! TCTGTTTAAAATGTAAAGGC+TGG - chr5_1:46139977-46139996 Msa0733140:CDS 30.0%
! TTTAAAATGTAAAGGCTGGT+TGG - chr5_1:46139981-46140000 Msa0733140:CDS 30.0%
AATGATACTCTTGATGTCTA+AGG - chr5_1:46140049-46140068 Msa0733140:CDS 30.0%
! ACCATCATTGTAATTTGTGT+CGG - chr5_1:46140190-46140209 Msa0733140:CDS 30.0%
TTGTGTCGGATGTTATATTA+AGG - chr5_1:46140204-46140223 Msa0733140:CDS 30.0%
! TATGGGATTTTTGTGTGAGA+TGG + chr5_1:46131224-46131243 None:intergenic 35.0%
TAATGGTTGGACGAATAAAC+CGG + chr5_1:46131537-46131556 None:intergenic 35.0%
TTATTCGTCCAACCATTAGT+CGG - chr5_1:46131539-46131558 Msa0733140:three_prime_UTR 35.0%
TTAAATGACCGACTAATGGT+TGG + chr5_1:46131550-46131569 None:intergenic 35.0%
AACCAATTATAACAACGGCA+AGG + chr5_1:46131640-46131659 None:intergenic 35.0%
ATTGGTTATGCTGCTGATAT+TGG - chr5_1:46131653-46131672 Msa0733140:three_prime_UTR 35.0%
! GCTGATATTGGTTACTTGAT+CGG - chr5_1:46131665-46131684 Msa0733140:three_prime_UTR 35.0%
AAGATCGAACAACTACATAG+TGG - chr5_1:46131957-46131976 Msa0733140:CDS 35.0%
!! TGATAGTTGGTATGTGCTTT+TGG - chr5_1:46132135-46132154 Msa0733140:intron 35.0%
!! ATGTGCTTTTGGTGGATATT+AGG - chr5_1:46132146-46132165 Msa0733140:intron 35.0%
GGTACGTAGATATGCATATA+AGG - chr5_1:46132195-46132214 Msa0733140:intron 35.0%
CGTAGATATGCATATAAGGT+AGG - chr5_1:46132199-46132218 Msa0733140:intron 35.0%
TAAAAAATGCCACGTGTCAA+AGG - chr5_1:46132309-46132328 Msa0733140:intron 35.0%
!! TTCTAGAACAGCATGTATTG+TGG + chr5_1:46132386-46132405 None:intergenic 35.0%
!!! ATTTTTTTTTTGTGGTGGCC+GGG - chr5_1:46132424-46132443 Msa0733140:intron 35.0%
ATAAAATATGCAAAGGTCCG+GGG + chr5_1:46132457-46132476 None:intergenic 35.0%
CATAAAATATGCAAAGGTCC+GGG + chr5_1:46132458-46132477 None:intergenic 35.0%
GCATAAAATATGCAAAGGTC+CGG + chr5_1:46132459-46132478 None:intergenic 35.0%
TAAGCTTAGCTCAGTTAGTT+TGG + chr5_1:46132487-46132506 None:intergenic 35.0%
! TTTTCCCGTACCATTGATAA+TGG - chr5_1:46132559-46132578 Msa0733140:intron 35.0%
! GGGACAGAAGAAGTATATAT+TGG - chr5_1:46132702-46132721 Msa0733140:intron 35.0%
!!! ACTGCTTGTTTTGAAACTCA+TGG - chr5_1:46132771-46132790 Msa0733140:intron 35.0%
GTATCCAACACAATGATCAA+TGG + chr5_1:46132798-46132817 None:intergenic 35.0%
AAAGCCAAAAATCCGACATA+TGG + chr5_1:46133031-46133050 None:intergenic 35.0%
! ATTTTCTCCAATGTTGTCGA+TGG + chr5_1:46133067-46133086 None:intergenic 35.0%
! TATCATCTGTTGCTTCCTTT+GGG - chr5_1:46133332-46133351 Msa0733140:intron 35.0%
!!! TTTTGGGAAGTGTTTCAAAC+AGG - chr5_1:46133578-46133597 Msa0733140:intron 35.0%
!! TTTTCTATTTTGGGAGGTCA+TGG - chr5_1:46133608-46133627 Msa0733140:intron 35.0%
GATAACTATACATGATGAGG+GGG + chr5_1:46133743-46133762 None:intergenic 35.0%
TTGTAGGCGTAAAGTAGAAA+AGG - chr5_1:46133868-46133887 Msa0733140:intron 35.0%
TGTAGGCGTAAAGTAGAAAA+GGG - chr5_1:46133869-46133888 Msa0733140:intron 35.0%
CGTAAAGTAGAAAAGGGTTT+AGG - chr5_1:46133875-46133894 Msa0733140:intron 35.0%
GAAATTCATTTCTCCTTCAC+CGG - chr5_1:46134021-46134040 Msa0733140:intron 35.0%
ATACTATTCTTAGGCTTCGA+AGG - chr5_1:46134077-46134096 Msa0733140:intron 35.0%
! TTAGTTTGATATGGCCTAAC+TGG - chr5_1:46134183-46134202 Msa0733140:intron 35.0%
TTTAGCATGAGATTATTGGG+AGG - chr5_1:46134231-46134250 Msa0733140:intron 35.0%
TCTCCCTTAAGTCAGATATT+GGG + chr5_1:46134322-46134341 None:intergenic 35.0%
AACTACAACAATAGAGCATG+AGG + chr5_1:46134384-46134403 None:intergenic 35.0%
AGTTAGTCATGTGATTCCAT+TGG - chr5_1:46134400-46134419 Msa0733140:intron 35.0%
!! ACACGACTTACTTTTATTGC+AGG + chr5_1:46134470-46134489 None:intergenic 35.0%
CTCTTCTATCCAATGTGATT+TGG - chr5_1:46134566-46134585 Msa0733140:intron 35.0%
CTTCATAGACTTCAGTTGTT+TGG + chr5_1:46134601-46134620 None:intergenic 35.0%
TATGAAGAGTTCCAAAAGAG+TGG - chr5_1:46134614-46134633 Msa0733140:intron 35.0%
ATCCTAACTAACTGTCTAGA+TGG - chr5_1:46134698-46134717 Msa0733140:intron 35.0%
TACCATCTAGACAGTTAGTT+AGG + chr5_1:46134703-46134722 None:intergenic 35.0%
! GCAAACAAACGATGCTTTTA+AGG - chr5_1:46134825-46134844 Msa0733140:CDS 35.0%
AAATTACCCAGTCTGCATAA+GGG - chr5_1:46134854-46134873 Msa0733140:CDS 35.0%
TGCTGAGATAAAGTTGCATA+TGG + chr5_1:46134943-46134962 None:intergenic 35.0%
!! ATAACGGATCCTTGTAGAAT+TGG - chr5_1:46135034-46135053 Msa0733140:CDS 35.0%
CAAGTATAGCCAATTCTACA+AGG + chr5_1:46135046-46135065 None:intergenic 35.0%
GGCTATACTTGTTCATAAGT+TGG - chr5_1:46135055-46135074 Msa0733140:CDS 35.0%
!! CGGTTGACTTGATCATAATT+AGG - chr5_1:46135269-46135288 Msa0733140:CDS 35.0%
! ATATATTTTGTGTGTGCGTG+TGG - chr5_1:46135378-46135397 Msa0733140:CDS 35.0%
GTACAATACACCAAAATGGT+GGG - chr5_1:46135705-46135724 Msa0733140:intron 35.0%
TTGCCTTTGCAAACCAAATT+AGG + chr5_1:46135797-46135816 None:intergenic 35.0%
!! AATGTGCTTTTATTTGCGAG+GGG + chr5_1:46135921-46135940 None:intergenic 35.0%
CTTTCATGTGGGAATTGTTT+GGG - chr5_1:46136357-46136376 Msa0733140:intron 35.0%
! CTCTTTGATACTGATTGGAT+GGG - chr5_1:46136461-46136480 Msa0733140:intron 35.0%
!! GAGGCCTTATTTATGATACT+GGG - chr5_1:46136513-46136532 Msa0733140:intron 35.0%
!! AGGCCTTATTTATGATACTG+GGG - chr5_1:46136514-46136533 Msa0733140:intron 35.0%
TTATGATACTGGGGTTAGAA+TGG - chr5_1:46136523-46136542 Msa0733140:intron 35.0%
TATGATACTGGGGTTAGAAT+GGG - chr5_1:46136524-46136543 Msa0733140:intron 35.0%
TAACATCATTGCTCATGGAA+AGG - chr5_1:46136585-46136604 Msa0733140:intron 35.0%
GGGACTCTCAAATATCTTTA+TGG - chr5_1:46136640-46136659 Msa0733140:intron 35.0%
ATAGCAATCTTTACCGTTCT+TGG - chr5_1:46136764-46136783 Msa0733140:intron 35.0%
TAGCAATCTTTACCGTTCTT+GGG - chr5_1:46136765-46136784 Msa0733140:intron 35.0%
TAAGAGAAACTTACTGCCAT+TGG + chr5_1:46136794-46136813 None:intergenic 35.0%
TGCGTTGAAATTAAGGCATA+TGG + chr5_1:46137111-46137130 None:intergenic 35.0%
TCAAAAGAAGAAATACCTGC+GGG + chr5_1:46137280-46137299 None:intergenic 35.0%
AAGAAGATTGTACTTCCACT+AGG + chr5_1:46137363-46137382 None:intergenic 35.0%
GTTGAATGTATGCCTATTGA+TGG - chr5_1:46137478-46137497 Msa0733140:intron 35.0%
AGTGCATTTGTCGCAATTAA+CGG - chr5_1:46137548-46137567 Msa0733140:intron 35.0%
! GATTTTACCAACTGTTGTGA+CGG + chr5_1:46137795-46137814 None:intergenic 35.0%
TTATACTGCATGTGTGAGAA+TGG + chr5_1:46138013-46138032 None:intergenic 35.0%
TCTCACACATGCAGTATAAT+TGG - chr5_1:46138014-46138033 Msa0733140:intron 35.0%
TTAGTATGCTTTCGTGTGTT+GGG + chr5_1:46138290-46138309 None:intergenic 35.0%
TTTAGTATGCTTTCGTGTGT+TGG + chr5_1:46138291-46138310 None:intergenic 35.0%
GGCTTTACTAATCTTATGTG+GGG - chr5_1:46138314-46138333 Msa0733140:intron 35.0%
CCATCCTACTACTACAAAAA+AGG + chr5_1:46138489-46138508 None:intergenic 35.0%
!!! CCTTTTTTGTAGTAGTAGGA+TGG - chr5_1:46138486-46138505 Msa0733140:intron 35.0%
!!! AGGACAAGGTATTTTTTCCA+GGG + chr5_1:46138612-46138631 None:intergenic 35.0%
GAAAAAATACCTTGTCCTCA+AGG - chr5_1:46138614-46138633 Msa0733140:intron 35.0%
! CCTCTAAAAGAAAAGCAACT+AGG + chr5_1:46138680-46138699 None:intergenic 35.0%
!!! CCTAGTTGCTTTTCTTTTAG+AGG - chr5_1:46138677-46138696 Msa0733140:intron 35.0%
CAAGAAGTTAGGTCTTAATG+AGG - chr5_1:46138726-46138745 Msa0733140:intron 35.0%
AATGAGGTAATAGGGAAAAG+TGG - chr5_1:46138742-46138761 Msa0733140:intron 35.0%
!! AGTGTTTGCTGTCTCTAAAT+AGG - chr5_1:46138777-46138796 Msa0733140:intron 35.0%
GTCTCTAAATAGGTTTGAGT+AGG - chr5_1:46138787-46138806 Msa0733140:intron 35.0%
! TTCTTTGCTGTATTTGTGGA+TGG + chr5_1:46138943-46138962 None:intergenic 35.0%
! CACTTTCTTTGCTGTATTTG+TGG + chr5_1:46138947-46138966 None:intergenic 35.0%
CACAAATACAGCAAAGAAAG+TGG - chr5_1:46138945-46138964 Msa0733140:intron 35.0%
CCTGAATATCTTGTCTCTAT+TGG + chr5_1:46139104-46139123 None:intergenic 35.0%
CCAATAGAGACAAGATATTC+AGG - chr5_1:46139101-46139120 Msa0733140:intron 35.0%
! ACAAATCTCGTTCCATCTTT+TGG + chr5_1:46139171-46139190 None:intergenic 35.0%
TATTCTACTTCGCAATGACT+AGG + chr5_1:46139216-46139235 None:intergenic 35.0%
CGTTTGGGGAATTATAAAAC+AGG + chr5_1:46139328-46139347 None:intergenic 35.0%
TACCGTAGTTTATTATTCCG+AGG - chr5_1:46139373-46139392 Msa0733140:intron 35.0%
TCGAACTATATACAGTACCT+CGG + chr5_1:46139393-46139412 None:intergenic 35.0%
!!! GAAATAGTGTAGTTTTGAGC+AGG - chr5_1:46139453-46139472 Msa0733140:intron 35.0%
!!! TGTAGTTTTGAGCAGGATTT+TGG - chr5_1:46139460-46139479 Msa0733140:intron 35.0%
AGCATATGATACCTCATATG+CGG + chr5_1:46139678-46139697 None:intergenic 35.0%
!! GGCACTTATTTCTTTTGAAG+AGG - chr5_1:46139708-46139727 Msa0733140:intron 35.0%
GAGAGGAAAACTCAAGAATA+AGG + chr5_1:46139787-46139806 None:intergenic 35.0%
! ATTTTCTGATGCAAAGGCTT+AGG - chr5_1:46139917-46139936 Msa0733140:CDS 35.0%
! TTTTCTGATGCAAAGGCTTA+GGG - chr5_1:46139918-46139937 Msa0733140:CDS 35.0%
AAAACCACGAGTGACATTTA+CGG - chr5_1:46140010-46140029 Msa0733140:CDS 35.0%
TCCGACACAAATTACAATGA+TGG + chr5_1:46140194-46140213 None:intergenic 35.0%
CATGTGGAATGATTCAAACT+CGG + chr5_1:46140321-46140340 None:intergenic 35.0%
TTTGTGTGAGATGGAAGCAA+AGG + chr5_1:46131215-46131234 None:intergenic 40.0%
TACCGAGTTGTTGAACGTAA+GGG + chr5_1:46131469-46131488 None:intergenic 40.0%
ATACCGAGTTGTTGAACGTA+AGG + chr5_1:46131470-46131489 None:intergenic 40.0%
AACTCGGTATCCCTCATAAA+TGG - chr5_1:46131480-46131499 Msa0733140:three_prime_UTR 40.0%
ACTCGGTATCCCTCATAAAT+GGG - chr5_1:46131481-46131500 Msa0733140:three_prime_UTR 40.0%
TCGCTTAAATGACCGACTAA+TGG + chr5_1:46131554-46131573 None:intergenic 40.0%
CTAAAATAAACGGTCTCCGA+CGG + chr5_1:46131598-46131617 None:intergenic 40.0%
!!! CGGAGACCGTTTATTTTAGT+CGG - chr5_1:46131599-46131618 Msa0733140:three_prime_UTR 40.0%
GTCCTTGCCGTTGTTATAAT+TGG - chr5_1:46131635-46131654 Msa0733140:three_prime_UTR 40.0%
!! TAGTTGGTATGTGCTTTTGG+TGG - chr5_1:46132138-46132157 Msa0733140:intron 40.0%
!! GCTTTTGGTGGATATTAGGT+AGG - chr5_1:46132150-46132169 Msa0733140:intron 40.0%
TGGACCATTGATCATTGTGT+TGG - chr5_1:46132791-46132810 Msa0733140:intron 40.0%
ATATCGGCCATAGCGAATAT+TGG - chr5_1:46132954-46132973 Msa0733140:intron 40.0%
!! GAATATTGGTGGCGGATTTA+AGG - chr5_1:46132968-46132987 Msa0733140:intron 40.0%
GTTGTCATCCTTCACCAAAT+TGG + chr5_1:46133007-46133026 None:intergenic 40.0%
! AACGCCATATGTCGGATTTT+TGG - chr5_1:46133024-46133043 Msa0733140:intron 40.0%
! CTATCATCTGTTGCTTCCTT+TGG - chr5_1:46133331-46133350 Msa0733140:intron 40.0%
CTAAATCATAGGGTTCCCAA+AGG + chr5_1:46133350-46133369 None:intergenic 40.0%
TACAAGTCCTCTTCTCACAA+TGG - chr5_1:46133437-46133456 Msa0733140:intron 40.0%
AGGATAACCATTGTGAGAAG+AGG + chr5_1:46133447-46133466 None:intergenic 40.0%
! GTTCAGTAGGTGTTGCATAA+AGG - chr5_1:46133766-46133785 Msa0733140:intron 40.0%
TTATATCAGAGTGAGTGGGA+TGG - chr5_1:46133964-46133983 Msa0733140:intron 40.0%
ACTAGATGTAATTGGCTGCA+GGG + chr5_1:46134149-46134168 None:intergenic 40.0%
TGGGAGGCAACTTATAGTAT+AGG - chr5_1:46134247-46134266 Msa0733140:intron 40.0%
GGGAGGCAACTTATAGTATA+GGG - chr5_1:46134248-46134267 Msa0733140:intron 40.0%
GGAGGCAACTTATAGTATAG+GGG - chr5_1:46134249-46134268 Msa0733140:intron 40.0%
GAGGCAACTTATAGTATAGG+GGG - chr5_1:46134250-46134269 Msa0733140:intron 40.0%
TCGACCCAATATCTGACTTA+AGG - chr5_1:46134315-46134334 Msa0733140:CDS 40.0%
CGACCCAATATCTGACTTAA+GGG - chr5_1:46134316-46134335 Msa0733140:CDS 40.0%
CTCTCCCTTAAGTCAGATAT+TGG + chr5_1:46134323-46134342 None:intergenic 40.0%
CAATATCTGACTTAAGGGAG+AGG - chr5_1:46134321-46134340 Msa0733140:CDS 40.0%
CCTCACATTGGATATCATGT+TGG + chr5_1:46134524-46134543 None:intergenic 40.0%
CCAACATGATATCCAATGTG+AGG - chr5_1:46134521-46134540 Msa0733140:intron 40.0%
ACTTCAGTTGTTTGGGTCTT+GGG + chr5_1:46134593-46134612 None:intergenic 40.0%
! CATCAAGTACTCCACTCTTT+TGG + chr5_1:46134628-46134647 None:intergenic 40.0%
! GTGGAGTACTTGATGATTCA+TGG - chr5_1:46134633-46134652 Msa0733140:intron 40.0%
! GAGTACTTGATGATTCATGG+AGG - chr5_1:46134636-46134655 Msa0733140:intron 40.0%
CTGTACACCTGATCAGAATT+AGG - chr5_1:46134668-46134687 Msa0733140:intron 40.0%
TACACCTGATCAGAATTAGG+TGG - chr5_1:46134671-46134690 Msa0733140:intron 40.0%
ACACCTGATCAGAATTAGGT+GGG - chr5_1:46134672-46134691 Msa0733140:intron 40.0%
AACTGTCTAGATGGTAGTTC+TGG - chr5_1:46134707-46134726 Msa0733140:intron 40.0%
ACTGTCTAGATGGTAGTTCT+GGG - chr5_1:46134708-46134727 Msa0733140:intron 40.0%
AATAGTAGGGTAGGCTAGAT+TGG - chr5_1:46134795-46134814 Msa0733140:CDS 40.0%
ATAGTAGGGTAGGCTAGATT+GGG - chr5_1:46134796-46134815 Msa0733140:CDS 40.0%
CAAATTACCCAGTCTGCATA+AGG - chr5_1:46134853-46134872 Msa0733140:CDS 40.0%
AATTACCCAGTCTGCATAAG+GGG - chr5_1:46134855-46134874 Msa0733140:CDS 40.0%
! CCTCAACAAAGCATTTCTTC+TGG + chr5_1:46134987-46135006 None:intergenic 40.0%
! CCAGAAGAAATGCTTTGTTG+AGG - chr5_1:46134984-46135003 Msa0733140:CDS 40.0%
GAGGGTTAACTCCAGAATAA+CGG - chr5_1:46135018-46135037 Msa0733140:CDS 40.0%
TCTACAAGGATCCGTTATTC+TGG + chr5_1:46135032-46135051 None:intergenic 40.0%
TTGAAGAGGGGAAATTGATG+CGG - chr5_1:46135163-46135182 Msa0733140:CDS 40.0%
CCAGTCGTGATTAGTGAATT+GGG - chr5_1:46135321-46135340 Msa0733140:CDS 40.0%
AAAGTGTAGTCCCCTTCAAA+AGG - chr5_1:46135425-46135444 Msa0733140:CDS 40.0%
AAGATCATTCAGAGAACCTC+TGG + chr5_1:46135503-46135522 None:intergenic 40.0%
!!! TAGCCTGTTTTTTGCACAAG+AGG + chr5_1:46135678-46135697 None:intergenic 40.0%
!! CATTTTGGTGTATTGTACGC+AGG + chr5_1:46135703-46135722 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG - chr5_1:46135701-46135720 Msa0733140:intron 40.0%
CGTACAATACACCAAAATGG+TGG - chr5_1:46135704-46135723 Msa0733140:intron 40.0%
ACGAAATGCTCATTTCCTCA+TGG - chr5_1:46135859-46135878 Msa0733140:intron 40.0%
TGTAATTCACACAGACCATG+AGG + chr5_1:46135877-46135896 None:intergenic 40.0%
!! ATGTGCTTTTATTTGCGAGG+GGG + chr5_1:46135920-46135939 None:intergenic 40.0%
! TGCCTATTTCTCCCTGTTTA+TGG - chr5_1:46136088-46136107 Msa0733140:intron 40.0%
AGCCATAAACAGGGAGAAAT+AGG + chr5_1:46136093-46136112 None:intergenic 40.0%
GTTACCAACAGCCATAAACA+GGG + chr5_1:46136102-46136121 None:intergenic 40.0%
TGTTACCAACAGCCATAAAC+AGG + chr5_1:46136103-46136122 None:intergenic 40.0%
!! ATGGCTGTTGGTAACATTCT+TGG - chr5_1:46136107-46136126 Msa0733140:intron 40.0%
AACATTCTTGGCTATGCAAC+TGG - chr5_1:46136119-46136138 Msa0733140:intron 40.0%
TATGCAACTGGATCATACAG+TGG - chr5_1:46136131-46136150 Msa0733140:intron 40.0%
AAGTGCCTCTAAGTTCAAGT+GGG - chr5_1:46136285-46136304 Msa0733140:intron 40.0%
GCTTTCATGTGGGAATTGTT+TGG - chr5_1:46136356-46136375 Msa0733140:intron 40.0%
ACAGACAGTACTATCCATAC+AGG + chr5_1:46136404-46136423 None:intergenic 40.0%
! GCTCTTTGATACTGATTGGA+TGG - chr5_1:46136460-46136479 Msa0733140:intron 40.0%
! TTGATACTGATTGGATGGGT+CGG - chr5_1:46136465-46136484 Msa0733140:intron 40.0%
! ATTTATGGTGGTGATCCAGA+AGG - chr5_1:46136491-46136510 Msa0733140:intron 40.0%
TCATAAATAAGGCCTCCTTC+TGG + chr5_1:46136509-46136528 None:intergenic 40.0%
!! GGAGGCCTTATTTATGATAC+TGG - chr5_1:46136512-46136531 Msa0733140:intron 40.0%
TGGAGTAACATCATTGCTCA+TGG - chr5_1:46136580-46136599 Msa0733140:intron 40.0%
TTCAACGCATATCGAACCAT+TGG - chr5_1:46137122-46137141 Msa0733140:intron 40.0%
TCAACGCATATCGAACCATT+GGG - chr5_1:46137123-46137142 Msa0733140:intron 40.0%
CCTTTAATAGAAACCCACCT+TGG + chr5_1:46137155-46137174 None:intergenic 40.0%
! CCAAGGTGGGTTTCTATTAA+AGG - chr5_1:46137152-46137171 Msa0733140:intron 40.0%
GTGCTTACAGGGTTATCAAT+GGG - chr5_1:46137230-46137249 Msa0733140:intron 40.0%
TTGCGACAAATGCACTGTAA+GGG + chr5_1:46137544-46137563 None:intergenic 40.0%
ATTGCGACAAATGCACTGTA+AGG + chr5_1:46137545-46137564 None:intergenic 40.0%
GTGCATTTGTCGCAATTAAC+GGG - chr5_1:46137549-46137568 Msa0733140:intron 40.0%
! TCGCAATTAACGGGATTTTC+AGG - chr5_1:46137558-46137577 Msa0733140:intron 40.0%
! TCAGCTTTATACTGCTGACA+AGG - chr5_1:46137734-46137753 Msa0733140:intron 40.0%
! TGGTACAGTTTGGTTCACAA+AGG + chr5_1:46137904-46137923 None:intergenic 40.0%
GAATGGTTCTTGGGTAATGA+TGG + chr5_1:46137996-46138015 None:intergenic 40.0%
CATGTGTGAGAATGGTTCTT+GGG + chr5_1:46138005-46138024 None:intergenic 40.0%
TTGCTCTTTGTTGCTGCATA+AGG + chr5_1:46138174-46138193 None:intergenic 40.0%
TTATGCAGCAACAAAGAGCA+AGG - chr5_1:46138173-46138192 Msa0733140:intron 40.0%
! TTCCAACTAGAGTGTCTGTA+TGG - chr5_1:46138252-46138271 Msa0733140:intron 40.0%
GCAAATTCACCCTTAGACTT+AGG + chr5_1:46138391-46138410 None:intergenic 40.0%
!! CTTCTGGATTTTGTTTGCCA+GGG - chr5_1:46138565-46138584 Msa0733140:intron 40.0%
!!! GAGGACAAGGTATTTTTTCC+AGG + chr5_1:46138613-46138632 None:intergenic 40.0%
AAAATACCTTGTCCTCAAGG+TGG - chr5_1:46138617-46138636 Msa0733140:intron 40.0%
TTATTTCCACCTTGAGGACA+AGG + chr5_1:46138626-46138645 None:intergenic 40.0%
GGTAATAGGGAAAAGTGGTA+TGG - chr5_1:46138747-46138766 Msa0733140:intron 40.0%
AGGGAAAAGTGGTATGGTAT+TGG - chr5_1:46138753-46138772 Msa0733140:intron 40.0%
ATCTTGCTCTGCTCAAAGAT+GGG - chr5_1:46139132-46139151 Msa0733140:intron 40.0%
CCACCAAATAATTGATCCCA+CGG + chr5_1:46139553-46139572 None:intergenic 40.0%
! TGGGATCAATTATTTGGTGG+AGG - chr5_1:46139553-46139572 Msa0733140:intron 40.0%
GAGGGATGATGAAAATGAAC+AGG - chr5_1:46139727-46139746 Msa0733140:intron 40.0%
TTCATTAGAAATCGAGTGGG+AGG + chr5_1:46139823-46139842 None:intergenic 40.0%
AAACCACGAGTGACATTTAC+GGG - chr5_1:46140011-46140030 Msa0733140:CDS 40.0%
TATATTAAGGCTAGATGCCG+CGG - chr5_1:46140217-46140236 Msa0733140:CDS 40.0%
!! GGAGGTGCCAATATTAACTT+TGG + chr5_1:46140273-46140292 None:intergenic 40.0%
CGAGTTTGAATCATTCCACA+TGG - chr5_1:46140319-46140338 Msa0733140:five_prime_UTR 40.0%
TCAGTGCTATCATGATGGTT+TGG - chr5_1:46140378-46140397 Msa0733140:five_prime_UTR 40.0%
GTGATGTGAGAGATGAAGGA+AGG + chr5_1:46131180-46131199 None:intergenic 45.0%
! TGTGGTGATGTGAGAGATGA+AGG + chr5_1:46131184-46131203 None:intergenic 45.0%
! GAATTGGATTCCGCTTGCTA+CGG + chr5_1:46131417-46131436 None:intergenic 45.0%
GTAGCAAGCGGAATCCAATT+CGG - chr5_1:46131416-46131435 Msa0733140:three_prime_UTR 45.0%
AAGCGGAATCCAATTCGGTT+GGG - chr5_1:46131421-46131440 Msa0733140:three_prime_UTR 45.0%
ACCCCTTACGTTCAACAACT+CGG - chr5_1:46131464-46131483 Msa0733140:three_prime_UTR 45.0%
ACCGAGTTGTTGAACGTAAG+GGG + chr5_1:46131468-46131487 None:intergenic 45.0%
TGATGCTCGCCCATTTATGA+GGG + chr5_1:46131493-46131512 None:intergenic 45.0%
ATGATGCTCGCCCATTTATG+AGG + chr5_1:46131494-46131513 None:intergenic 45.0%
ATAAATGGGCGAGCATCATC+TGG - chr5_1:46131495-46131514 Msa0733140:three_prime_UTR 45.0%
!!! ACCGTTTATTTTAGTCGGCG+CGG - chr5_1:46131604-46131623 Msa0733140:three_prime_UTR 45.0%
TCAGCGAGTAAAGCTCTACA+AGG + chr5_1:46131785-46131804 None:intergenic 45.0%
TTGTCTTTCAGACACTCCCT+CGG - chr5_1:46132359-46132378 Msa0733140:intron 45.0%
CTAACTGAGCTAAGCTTACG+AGG - chr5_1:46132489-46132508 Msa0733140:intron 45.0%
ATCCTTCACCAAATTGGCCA+TGG + chr5_1:46133001-46133020 None:intergenic 45.0%
AGGATGACAACGCCATATGT+CGG - chr5_1:46133016-46133035 Msa0733140:intron 45.0%
! AGAGAGAAAGCGTGGTAACT+TGG - chr5_1:46133828-46133847 Msa0733140:intron 45.0%
CGTCAAACACAATGTTTGCC+AGG + chr5_1:46133993-46134012 None:intergenic 45.0%
CATTGTGTTTGACGAGCCTT+TGG - chr5_1:46133999-46134018 Msa0733140:intron 45.0%
TGCAAAGAAAAAGCCGGTGA+AGG + chr5_1:46134037-46134056 None:intergenic 45.0%
CACTAGATGTAATTGGCTGC+AGG + chr5_1:46134150-46134169 None:intergenic 45.0%
AATCTCTCATTGGATGGAGC+AGG - chr5_1:46134283-46134302 Msa0733140:intron 45.0%
ATCTCTCATTGGATGGAGCA+GGG - chr5_1:46134284-46134303 Msa0733140:intron 45.0%
GTCTTGGGTCCAAATCACAT+TGG + chr5_1:46134578-46134597 None:intergenic 45.0%
GACTTCAGTTGTTTGGGTCT+TGG + chr5_1:46134594-46134613 None:intergenic 45.0%
! CTTGATGATTCATGGAGGTC+CGG - chr5_1:46134641-46134660 Msa0733140:intron 45.0%
CACCTGATCAGAATTAGGTG+GGG - chr5_1:46134673-46134692 Msa0733140:intron 45.0%
ATCCCCACCTAATTCTGATC+AGG + chr5_1:46134678-46134697 None:intergenic 45.0%
! CTGTCTAGATGGTAGTTCTG+GGG - chr5_1:46134709-46134728 Msa0733140:intron 45.0%
!! ATGGTAGTTCTGGGGAAAGT+AGG - chr5_1:46134717-46134736 Msa0733140:intron 45.0%
TAAGTAAAAAGGGAGGGGGT+AGG - chr5_1:46134768-46134787 Msa0733140:intron 45.0%
AAGTAAAAAGGGAGGGGGTA+GGG - chr5_1:46134769-46134788 Msa0733140:intron 45.0%
GTAGGGGTAAATAGTAGGGT+AGG - chr5_1:46134786-46134805 Msa0733140:CDS 45.0%
ATTACCCAGTCTGCATAAGG+GGG - chr5_1:46134856-46134875 Msa0733140:CDS 45.0%
TAGCTTCAAGCACTCCATCA+AGG + chr5_1:46134882-46134901 None:intergenic 45.0%
TGTTGAGGCTAGAGTAGTTG+AGG - chr5_1:46134999-46135018 Msa0733140:CDS 45.0%
GTTGAGGCTAGAGTAGTTGA+GGG - chr5_1:46135000-46135019 Msa0733140:CDS 45.0%
! GTGCTTTTGTTCCTTGCACT+GGG - chr5_1:46135077-46135096 Msa0733140:CDS 45.0%
! CCAGTAAAAGGTTTTCCCTC+GGG + chr5_1:46135105-46135124 None:intergenic 45.0%
! GCCAGTAAAAGGTTTTCCCT+CGG + chr5_1:46135106-46135125 None:intergenic 45.0%
CTTCATGCGCATTCACCTAA+GGG - chr5_1:46135128-46135147 Msa0733140:CDS 45.0%
!!! GACGAGGTGAGTTTTGAAGA+GGG - chr5_1:46135150-46135169 Msa0733140:CDS 45.0%
!!! ACGAGGTGAGTTTTGAAGAG+GGG - chr5_1:46135151-46135170 Msa0733140:CDS 45.0%
CTTCAGTGACTTAGGACCTT+GGG + chr5_1:46135190-46135209 None:intergenic 45.0%
ACTTCAGTGACTTAGGACCT+TGG + chr5_1:46135191-46135210 None:intergenic 45.0%
!! CACATCGACTTCAGTGACTT+AGG + chr5_1:46135198-46135217 None:intergenic 45.0%
CTAAGTCACTGAAGTCGATG+TGG - chr5_1:46135196-46135215 Msa0733140:CDS 45.0%
TGGAAGAGGTCCAAAAGAGT+GGG - chr5_1:46135216-46135235 Msa0733140:CDS 45.0%
GTACCTAACCCGACAATTGA+AGG - chr5_1:46135241-46135260 Msa0733140:CDS 45.0%
CTAATCACGACTGGCAACTA+GGG + chr5_1:46135315-46135334 None:intergenic 45.0%
ACTAATCACGACTGGCAACT+AGG + chr5_1:46135316-46135335 None:intergenic 45.0%
GCCAGTCGTGATTAGTGAAT+TGG - chr5_1:46135320-46135339 Msa0733140:CDS 45.0%
CCCAATTCACTAATCACGAC+TGG + chr5_1:46135324-46135343 None:intergenic 45.0%
! TATTTTGTGTGTGCGTGTGG+TGG - chr5_1:46135381-46135400 Msa0733140:CDS 45.0%
! ATTTTGTGTGTGCGTGTGGT+GGG - chr5_1:46135382-46135401 Msa0733140:CDS 45.0%
!! TCTGCATTGATTGCTACCAG+AGG - chr5_1:46135484-46135503 Msa0733140:CDS 45.0%
ATAACTTTGCCTTGGCGCAA+CGG - chr5_1:46135600-46135619 Msa0733140:intron 45.0%
ACGGTAAAGTTGTTGTCACG+TGG - chr5_1:46135619-46135638 Msa0733140:intron 45.0%
AAGGTCATGAGTTCAAGTCC+TGG - chr5_1:46135646-46135665 Msa0733140:intron 45.0%
CAGCCTCTTGTGCAAAAAAC+AGG - chr5_1:46135672-46135691 Msa0733140:intron 45.0%
TGTTAGGCAATGATGCTCGA+AGG - chr5_1:46136051-46136070 Msa0733140:intron 45.0%
TTCTCCCTGTTTATGGCTGT+TGG - chr5_1:46136095-46136114 Msa0733140:intron 45.0%
GCACAACTAATAGAGCAAGC+AGG + chr5_1:46136188-46136207 None:intergenic 45.0%
!! TCTCGACGTTGGTTTCATTG+CGG - chr5_1:46136229-46136248 Msa0733140:intron 45.0%
! GAAGTGCCTCTAAGTTCAAG+TGG - chr5_1:46136284-46136303 Msa0733140:intron 45.0%
AGTGCCTCTAAGTTCAAGTG+GGG - chr5_1:46136286-46136305 Msa0733140:intron 45.0%
TGCGGAAGAAGCTTTCATGT+GGG - chr5_1:46136346-46136365 Msa0733140:intron 45.0%
TGTCTGTAACTGCTCTGACA+TGG - chr5_1:46136417-46136436 Msa0733140:intron 45.0%
GTAACTGCTCTGACATGGAT+TGG - chr5_1:46136422-46136441 Msa0733140:intron 45.0%
! TGATACTGATTGGATGGGTC+GGG - chr5_1:46136466-46136485 Msa0733140:intron 45.0%
TGGATGGGTCGGGAAATTTA+TGG - chr5_1:46136476-46136495 Msa0733140:intron 45.0%
ATGGGTCGGGAAATTTATGG+TGG - chr5_1:46136479-46136498 Msa0733140:intron 45.0%
AAAGGCTATGCAGAAAGCGA+GGG - chr5_1:46136603-46136622 Msa0733140:intron 45.0%
ACCTATGCGGCAAATAGCAT+TGG - chr5_1:46136692-46136711 Msa0733140:intron 45.0%
TAAAGCTCAACCACCACCAA+CGG - chr5_1:46136724-46136743 Msa0733140:intron 45.0%
TACCGTTCTTGGGTTTCCAA+TGG - chr5_1:46136775-46136794 Msa0733140:intron 45.0%
TGCCATTGGAAACCCAAGAA+CGG + chr5_1:46136780-46136799 None:intergenic 45.0%
CATATCGAACCATTGGGACT+TGG - chr5_1:46137129-46137148 Msa0733140:intron 45.0%
!! TTTGGATTCTCGGTGCTTAC+AGG - chr5_1:46137218-46137237 Msa0733140:intron 45.0%
!! TTGGATTCTCGGTGCTTACA+GGG - chr5_1:46137219-46137238 Msa0733140:intron 45.0%
GGTGCTTACAGGGTTATCAA+TGG - chr5_1:46137229-46137248 Msa0733140:intron 45.0%
ATCAATGGGTGTCCTGAATC+TGG - chr5_1:46137244-46137263 Msa0733140:intron 45.0%
TGTCCTGAATCTGGCAATAG+TGG - chr5_1:46137253-46137272 Msa0733140:intron 45.0%
! ATGCCTATTGATGGCATGAC+TGG - chr5_1:46137487-46137506 Msa0733140:intron 45.0%
TTGCCAGTCATGCCATCAAT+AGG + chr5_1:46137493-46137512 None:intergenic 45.0%
!!! AACGGGATTTTCAGGTCACA+TGG - chr5_1:46137566-46137585 Msa0733140:intron 45.0%
!!! ACGGGATTTTCAGGTCACAT+GGG - chr5_1:46137567-46137586 Msa0733140:intron 45.0%
GACAAGGACAGTTCATGGTT+CGG - chr5_1:46137750-46137769 Msa0733140:intron 45.0%
AACTGAACCGTCACAACAGT+TGG - chr5_1:46137785-46137804 Msa0733140:intron 45.0%
! GATATGAAGGTTCGGTACAC+CGG - chr5_1:46137825-46137844 Msa0733140:intron 45.0%
TTCTGTGGTTCCTAACCGAA+TGG - chr5_1:46137848-46137867 Msa0733140:intron 45.0%
TCTGTGGTTCCTAACCGAAT+GGG - chr5_1:46137849-46137868 Msa0733140:intron 45.0%
TTGTTAAGGGGTTCCCCATT+CGG + chr5_1:46137866-46137885 None:intergenic 45.0%
GCATGTGTGAGAATGGTTCT+TGG + chr5_1:46138006-46138025 None:intergenic 45.0%
CACCATACAGACACTCTAGT+TGG + chr5_1:46138257-46138276 None:intergenic 45.0%
AGTGTCTGTATGGTGTGAAC+TGG - chr5_1:46138262-46138281 Msa0733140:intron 45.0%
CCTGGCAAACAAAATCCAGA+AGG + chr5_1:46138567-46138586 None:intergenic 45.0%
!! CCTTCTGGATTTTGTTTGCC+AGG - chr5_1:46138564-46138583 Msa0733140:intron 45.0%
GTAATGAAACAACAGCTCCC+TGG + chr5_1:46138585-46138604 None:intergenic 45.0%
! GTTGTTTCATTACTCGTCCC+TGG - chr5_1:46138592-46138611 Msa0733140:intron 45.0%
AGCACAACCTCTCTGTGAAA+CGG - chr5_1:46138968-46138987 Msa0733140:intron 45.0%
TCAATCACCGTTTCACAGAG+AGG + chr5_1:46138978-46138997 None:intergenic 45.0%
CATCTTGCTCTGCTCAAAGA+TGG - chr5_1:46139131-46139150 Msa0733140:intron 45.0%
GCGCACACAACTGACAAAAA+GGG - chr5_1:46139283-46139302 Msa0733140:intron 45.0%
TAAACAGATTGTGGTGTCCC+TGG - chr5_1:46139519-46139538 Msa0733140:intron 45.0%
AAACAGATTGTGGTGTCCCT+GGG - chr5_1:46139520-46139539 Msa0733140:intron 45.0%
GGACCGTGGGATCAATTATT+TGG - chr5_1:46139547-46139566 Msa0733140:intron 45.0%
CCGTGGGATCAATTATTTGG+TGG - chr5_1:46139550-46139569 Msa0733140:intron 45.0%
! TAGGCTTTTGCGTACGAGTT+CGG + chr5_1:46139651-46139670 None:intergenic 45.0%
ATACCTCATATGCGGACTCT+AGG + chr5_1:46139670-46139689 None:intergenic 45.0%
TTAGAAATCGAGTGGGAGGT+TGG + chr5_1:46139819-46139838 None:intergenic 45.0%
! AGTGACATTTACGGGCTGTA+AGG - chr5_1:46140019-46140038 Msa0733140:CDS 45.0%
! ACATTTACGGGCTGTAAGGA+AGG - chr5_1:46140023-46140042 Msa0733140:CDS 45.0%
! CATTTACGGGCTGTAAGGAA+GGG - chr5_1:46140024-46140043 Msa0733140:CDS 45.0%
! ATTTACGGGCTGTAAGGAAG+GGG - chr5_1:46140025-46140044 Msa0733140:CDS 45.0%
ATATTAAGGCTAGATGCCGC+GGG - chr5_1:46140218-46140237 Msa0733140:CDS 45.0%
AACTCGTCTTTGGTGGGAAA+AGG + chr5_1:46140294-46140313 None:intergenic 45.0%
GGCAATAACTCGTCTTTGGT+GGG + chr5_1:46140300-46140319 None:intergenic 45.0%
ACTCGGCAATAACTCGTCTT+TGG + chr5_1:46140304-46140323 None:intergenic 45.0%
GATGCACAATCAGAATTGCC+TGG + chr5_1:46140360-46140379 None:intergenic 45.0%
GTGCATCAGTGCTATCATGA+TGG - chr5_1:46140373-46140392 Msa0733140:five_prime_UTR 45.0%
!! AAATTTAAATGAAATAATTA+AGG - chr5_1:46132270-46132289 Msa0733140:intron 5.0%
!!! AAAATGTAATTAATATTTTA+TGG + chr5_1:46132618-46132637 None:intergenic 5.0%
!! TAATTTAACAAAATAAAAAT+TGG + chr5_1:46133923-46133942 None:intergenic 5.0%
!!! AATTAAATTTGAATTTTTAA+AGG - chr5_1:46135550-46135569 Msa0733140:intron 5.0%
!! AGTTAATAATAATAATAATT+TGG + chr5_1:46137924-46137943 None:intergenic 5.0%
AGATGGAAGCAAAGGTGGTG+CGG + chr5_1:46131207-46131226 None:intergenic 50.0%
GTGTGAGATGGAAGCAAAGG+TGG + chr5_1:46131212-46131231 None:intergenic 50.0%
! TGGAAGAAATGGGGGGGTAT+GGG + chr5_1:46131241-46131260 None:intergenic 50.0%
! AGGTGTGGTGGAAGAAATGG+GGG + chr5_1:46131249-46131268 None:intergenic 50.0%
! GAGGTGTGGTGGAAGAAATG+GGG + chr5_1:46131250-46131269 None:intergenic 50.0%
! GGAGGTGTGGTGGAAGAAAT+GGG + chr5_1:46131251-46131270 None:intergenic 50.0%
ACACCTCCCCAATCCAGATT+CGG - chr5_1:46131263-46131282 Msa0733140:three_prime_UTR 50.0%
GTGATGCCGAATCTGGATTG+GGG + chr5_1:46131272-46131291 None:intergenic 50.0%
CGTGATGCCGAATCTGGATT+GGG + chr5_1:46131273-46131292 None:intergenic 50.0%
TCGTGATGCCGAATCTGGAT+TGG + chr5_1:46131274-46131293 None:intergenic 50.0%
!! GGGTTTGTTGGAGTGGGATT+CGG + chr5_1:46131299-46131318 None:intergenic 50.0%
CAAGCGGAATCCAATTCGGT+TGG - chr5_1:46131420-46131439 Msa0733140:three_prime_UTR 50.0%
GCTGTAAAGCCCAACCGAAT+TGG + chr5_1:46131433-46131452 None:intergenic 50.0%
TGGACGAATAAACCGGAGAC+CGG + chr5_1:46131530-46131549 None:intergenic 50.0%
!! GCCGCGCCGACTAAAATAAA+CGG + chr5_1:46131608-46131627 None:intergenic 50.0%
ATGCCACGTGTCAAAGGATG+CGG - chr5_1:46132315-46132334 Msa0733140:intron 50.0%
CAGCATGTATTGTGGACCGA+GGG + chr5_1:46132378-46132397 None:intergenic 50.0%
ACAGCATGTATTGTGGACCG+AGG + chr5_1:46132379-46132398 None:intergenic 50.0%
TCGGCCATAGCGAATATTGG+TGG - chr5_1:46132957-46132976 Msa0733140:intron 50.0%
GCCATAGCGAATATTGGTGG+CGG - chr5_1:46132960-46132979 Msa0733140:intron 50.0%
TCCGCCACCAATATTCGCTA+TGG + chr5_1:46132964-46132983 None:intergenic 50.0%
! GGATTTAAGGCTTTCCGCCA+TGG - chr5_1:46132981-46133000 Msa0733140:intron 50.0%
CTTCACCAAATTGGCCATGG+CGG + chr5_1:46132998-46133017 None:intergenic 50.0%
!!! GGATTTTTGGCTTTCCGCCA+TGG - chr5_1:46133037-46133056 Msa0733140:intron 50.0%
ATGTTGTCGATGGCAGACCA+TGG + chr5_1:46133057-46133076 None:intergenic 50.0%
TGGTCTGCCATCGACAACAT+TGG - chr5_1:46133057-46133076 Msa0733140:intron 50.0%
TACATGATGAGGGGGAAGCA+AGG + chr5_1:46133735-46133754 None:intergenic 50.0%
TGGATGAGAGAGAGAAAGCG+TGG - chr5_1:46133820-46133839 Msa0733140:intron 50.0%
CTTAGGCTTCGAAGGTCTCT+TGG - chr5_1:46134085-46134104 Msa0733140:intron 50.0%
TGATCAGGTGTACAGTGCAC+CGG + chr5_1:46134663-46134682 None:intergenic 50.0%
AGTAAAAAGGGAGGGGGTAG+GGG - chr5_1:46134770-46134789 Msa0733140:intron 50.0%
AGGGGGTAGGGGTAAATAGT+AGG - chr5_1:46134781-46134800 Msa0733140:intron 50.0%
GGGGGTAGGGGTAAATAGTA+GGG - chr5_1:46134782-46134801 Msa0733140:CDS 50.0%
! GGTGCTTTTGTTCCTTGCAC+TGG - chr5_1:46135076-46135095 Msa0733140:CDS 50.0%
! CCCGAGGGAAAACCTTTTAC+TGG - chr5_1:46135102-46135121 Msa0733140:CDS 50.0%
CGCATGAAGCAGCCAGTAAA+AGG + chr5_1:46135117-46135136 None:intergenic 50.0%
GCTTCATGCGCATTCACCTA+AGG - chr5_1:46135127-46135146 Msa0733140:CDS 50.0%
CAAAACTCACCTCGTCCCTT+AGG + chr5_1:46135146-46135165 None:intergenic 50.0%
!!! GGACGAGGTGAGTTTTGAAG+AGG - chr5_1:46135149-46135168 Msa0733140:CDS 50.0%
CACTGAAGTCGATGTGGAAG+AGG - chr5_1:46135202-46135221 Msa0733140:CDS 50.0%
GTGGAAGAGGTCCAAAAGAG+TGG - chr5_1:46135215-46135234 Msa0733140:CDS 50.0%
GGAAGAGGTCCAAAAGAGTG+GGG - chr5_1:46135217-46135236 Msa0733140:CDS 50.0%
GAAGAGGTCCAAAAGAGTGG+GGG - chr5_1:46135218-46135237 Msa0733140:CDS 50.0%
AAGAGGTCCAAAAGAGTGGG+GGG - chr5_1:46135219-46135238 Msa0733140:CDS 50.0%
! TTAGGTACCCCCCACTCTTT+TGG + chr5_1:46135229-46135248 None:intergenic 50.0%
CCTCCTTCAATTGTCGGGTT+AGG + chr5_1:46135247-46135266 None:intergenic 50.0%
CCTAACCCGACAATTGAAGG+AGG - chr5_1:46135244-46135263 Msa0733140:CDS 50.0%
ACCGCACCTCCTTCAATTGT+CGG + chr5_1:46135253-46135272 None:intergenic 50.0%
! TTTTGTGTGTGCGTGTGGTG+GGG - chr5_1:46135383-46135402 Msa0733140:CDS 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr5_1:46135612-46135631 None:intergenic 50.0%
GTTGTTGTCACGTGGCTGAA+AGG - chr5_1:46135627-46135646 Msa0733140:intron 50.0%
! TTGCACAAGAGGCTGTTTCC+AGG + chr5_1:46135667-46135686 None:intergenic 50.0%
!! CTTTTATTTGCGAGGGGGTG+AGG + chr5_1:46135915-46135934 None:intergenic 50.0%
CAACTGGATCATACAGTGGC+TGG - chr5_1:46136135-46136154 Msa0733140:intron 50.0%
TCTGCGTTCTTTCTCGACGT+TGG - chr5_1:46136218-46136237 Msa0733140:intron 50.0%
GTGCGGAAGAAGCTTTCATG+TGG - chr5_1:46136345-46136364 Msa0733140:intron 50.0%
!! CTGCTCTGACATGGATTGGA+TGG - chr5_1:46136426-46136445 Msa0733140:intron 50.0%
! TATGGTGGTGATCCAGAAGG+AGG - chr5_1:46136494-46136513 Msa0733140:intron 50.0%
GAAAGGCTATGCAGAAAGCG+AGG - chr5_1:46136602-46136621 Msa0733140:intron 50.0%
AAGGCTATGCAGAAAGCGAG+GGG - chr5_1:46136604-46136623 Msa0733140:intron 50.0%
! GCCAATGCTATTTGCCGCAT+AGG + chr5_1:46136696-46136715 None:intergenic 50.0%
AAAGCTCAACCACCACCAAC+GGG - chr5_1:46136725-46136744 Msa0733140:intron 50.0%
GGACCACTATTGCCAGATTC+AGG + chr5_1:46137259-46137278 None:intergenic 50.0%
! TTGATGGCATGACTGGCAAG+AGG - chr5_1:46137494-46137513 Msa0733140:intron 50.0%
CTGCTGACAAGGACAGTTCA+TGG - chr5_1:46137745-46137764 Msa0733140:intron 50.0%
!! GACAGTTCATGGTTCGGTTC+TGG - chr5_1:46137756-46137775 Msa0733140:intron 50.0%
!! GTTCATGGTTCGGTTCTGGT+AGG - chr5_1:46137760-46137779 Msa0733140:intron 50.0%
TCGGTTAGGAACCACAGAAC+CGG + chr5_1:46137847-46137866 None:intergenic 50.0%
CTGTGGTTCCTAACCGAATG+GGG - chr5_1:46137850-46137869 Msa0733140:intron 50.0%
ACACACAGGGCCTAAGTCTA+AGG - chr5_1:46138378-46138397 Msa0733140:intron 50.0%
CACACAGGGCCTAAGTCTAA+GGG - chr5_1:46138379-46138398 Msa0733140:intron 50.0%
AGATCCTGTGACCTGAGCAT+CGG + chr5_1:46138515-46138534 None:intergenic 50.0%
CGCGCACACAACTGACAAAA+AGG - chr5_1:46139282-46139301 Msa0733140:intron 50.0%
AGCCAGGAGTCCACTCAAAA+GGG + chr5_1:46139614-46139633 None:intergenic 50.0%
GGGGAATAGCTAATAGAGCC+AGG + chr5_1:46139630-46139649 None:intergenic 50.0%
! AGGCTTTTGCGTACGAGTTC+GGG + chr5_1:46139650-46139669 None:intergenic 50.0%
AAGCCTAGAGTCCGCATATG+AGG - chr5_1:46139664-46139683 Msa0733140:intron 50.0%
GAGGTTGGAATCTTGAGGAG+AGG + chr5_1:46139804-46139823 None:intergenic 50.0%
AGTGGGAGGTTGGAATCTTG+AGG + chr5_1:46139809-46139828 None:intergenic 50.0%
! TTTACGGGCTGTAAGGAAGG+GGG - chr5_1:46140026-46140045 Msa0733140:CDS 50.0%
ATGCCGCGGGAATGTATGTT+GGG - chr5_1:46140231-46140250 Msa0733140:CDS 50.0%
TCGTCTTTGGTGGGAAAAGG+AGG + chr5_1:46140291-46140310 None:intergenic 50.0%
CGGCAATAACTCGTCTTTGG+TGG + chr5_1:46140301-46140320 None:intergenic 50.0%
GTGGAAGAAATGGGGGGGTA+TGG + chr5_1:46131242-46131261 None:intergenic 55.0%
! GTGTGGTGGAAGAAATGGGG+GGG + chr5_1:46131247-46131266 None:intergenic 55.0%
! GGTGTGGTGGAAGAAATGGG+GGG + chr5_1:46131248-46131267 None:intergenic 55.0%
! GGGAGGTGTGGTGGAAGAAA+TGG + chr5_1:46131252-46131271 None:intergenic 55.0%
! GAATCTGGATTGGGGAGGTG+TGG + chr5_1:46131264-46131283 None:intergenic 55.0%
! ATGCCGAATCTGGATTGGGG+AGG + chr5_1:46131269-46131288 None:intergenic 55.0%
TGATGTGGATGGTCGGGTTC+TGG + chr5_1:46131330-46131349 None:intergenic 55.0%
!! GGAGGTTGATGTGGATGGTC+GGG + chr5_1:46131336-46131355 None:intergenic 55.0%
!! GGGAGGTTGATGTGGATGGT+CGG + chr5_1:46131337-46131356 None:intergenic 55.0%
ATCCACATCAACCTCCCGTC+CGG - chr5_1:46131340-46131359 Msa0733140:three_prime_UTR 55.0%
AAGGGGGTTCGTGGTTGAAC+CGG + chr5_1:46131371-46131390 None:intergenic 55.0%
ACTCGGAGGAGTTGGCGTAA+GGG + chr5_1:46131389-46131408 None:intergenic 55.0%
!! CATCATCTGGCTCTGTGGAC+CGG - chr5_1:46131508-46131527 Msa0733140:three_prime_UTR 55.0%
TAGCCGCATCCTTTGACACG+TGG + chr5_1:46132321-46132340 None:intergenic 55.0%
AAGGTCCGGGGTTCAAATCC+CGG + chr5_1:46132445-46132464 None:intergenic 55.0%
GCTTTCCGCCATGGCCAATT+TGG - chr5_1:46132990-46133009 Msa0733140:intron 55.0%
! CGCCATGGCCAATTTGGTGA+AGG - chr5_1:46132996-46133015 Msa0733140:intron 55.0%
TTGTCGATGGCAGACCATGG+CGG + chr5_1:46133054-46133073 None:intergenic 55.0%
GAGTGAGTGGGATGGTAACC+TGG - chr5_1:46133972-46133991 Msa0733140:intron 55.0%
AAGGCCCCCTTATGCAGACT+GGG + chr5_1:46134863-46134882 None:intergenic 55.0%
TCTGCATAAGGGGGCCTTGA+TGG - chr5_1:46134865-46134884 Msa0733140:CDS 55.0%
GGGAAATTGATGCGGACCCA+AGG - chr5_1:46135171-46135190 Msa0733140:CDS 55.0%
CCGCACCTCCTTCAATTGTC+GGG + chr5_1:46135252-46135271 None:intergenic 55.0%
CCCGACAATTGAAGGAGGTG+CGG - chr5_1:46135249-46135268 Msa0733140:CDS 55.0%
TTTGTGTGTGCGTGTGGTGG+GGG - chr5_1:46135384-46135403 Msa0733140:CDS 55.0%
! ATGCGGGAGCTTTAGTGGAC+TGG - chr5_1:46135749-46135768 Msa0733140:intron 55.0%
GCTGCCCCACTTGAACTTAG+AGG + chr5_1:46136293-46136312 None:intergenic 55.0%
!! GGGGTTAGAATGGGAGCACT+TGG - chr5_1:46136533-46136552 Msa0733140:intron 55.0%
GAACCATTGGGACTTGGCCA+AGG - chr5_1:46137135-46137154 Msa0733140:intron 55.0%
CATTGGGACTTGGCCAAGGT+GGG - chr5_1:46137139-46137158 Msa0733140:intron 55.0%
AAGGGGTTCCCCATTCGGTT+AGG + chr5_1:46137861-46137880 None:intergenic 55.0%
TAGGATGGTTGCCGATGCTC+AGG - chr5_1:46138501-46138520 Msa0733140:intron 55.0%
ATTGTGGTGTCCCTGGGAAG+TGG - chr5_1:46139526-46139545 Msa0733140:intron 55.0%
AAACTCTCCAGCCTTTGCCG+TGG - chr5_1:46139576-46139595 Msa0733140:intron 55.0%
! GCTGTTGCAGCCCTTTTGAG+TGG - chr5_1:46139601-46139620 Msa0733140:intron 55.0%
!! AGCCCTTTTGAGTGGACTCC+TGG - chr5_1:46139609-46139628 Msa0733140:intron 55.0%
GAGCCAGGAGTCCACTCAAA+AGG + chr5_1:46139615-46139634 None:intergenic 55.0%
! GGCTTTTGCGTACGAGTTCG+GGG + chr5_1:46139649-46139668 None:intergenic 55.0%
CAGCCCGTAAATGTCACTCG+TGG + chr5_1:46140017-46140036 None:intergenic 55.0%
GATGCCGCGGGAATGTATGT+TGG - chr5_1:46140230-46140249 Msa0733140:CDS 55.0%
TGCCGCGGGAATGTATGTTG+GGG - chr5_1:46140232-46140251 Msa0733140:CDS 55.0%
TGCCCCAACATACATTCCCG+CGG + chr5_1:46140237-46140256 None:intergenic 55.0%
GAAGCAAAGGTGGTGCGGTG+TGG + chr5_1:46131202-46131221 None:intergenic 60.0%
! TCTGGATTGGGGAGGTGTGG+TGG + chr5_1:46131261-46131280 None:intergenic 60.0%
CGGCATCGTGATGCCGAATC+TGG + chr5_1:46131279-46131298 None:intergenic 60.0%
!! CGGTGGGGGTTTGTTGGAGT+GGG + chr5_1:46131305-46131324 None:intergenic 60.0%
CCACTCCAACAAACCCCCAC+CGG - chr5_1:46131303-46131322 Msa0733140:three_prime_UTR 60.0%
!! TGGATGGTCGGGTTCTGGAC+CGG + chr5_1:46131325-46131344 None:intergenic 60.0%
!! GGACGGGAGGTTGATGTGGA+TGG + chr5_1:46131341-46131360 None:intergenic 60.0%
TTGAACCGGTTGGACCGGAC+GGG + chr5_1:46131357-46131376 None:intergenic 60.0%
GTTGAACCGGTTGGACCGGA+CGG + chr5_1:46131358-46131377 None:intergenic 60.0%
CGTGGTTGAACCGGTTGGAC+CGG + chr5_1:46131362-46131381 None:intergenic 60.0%
GGGTTCGTGGTTGAACCGGT+TGG + chr5_1:46131367-46131386 None:intergenic 60.0%
AGTTGGCGTAAGGGGGTTCG+TGG + chr5_1:46131380-46131399 None:intergenic 60.0%
TCGGAGGAGTTGGCGTAAGG+GGG + chr5_1:46131387-46131406 None:intergenic 60.0%
CTCGGAGGAGTTGGCGTAAG+GGG + chr5_1:46131388-46131407 None:intergenic 60.0%
GACTCGGAGGAGTTGGCGTA+AGG + chr5_1:46131390-46131409 None:intergenic 60.0%
! TTGCTACGGATGCGACTCGG+AGG + chr5_1:46131403-46131422 None:intergenic 60.0%
! CGCTTGCTACGGATGCGACT+CGG + chr5_1:46131406-46131425 None:intergenic 60.0%
CGAGTCGCATCCGTAGCAAG+CGG - chr5_1:46131404-46131423 Msa0733140:three_prime_UTR 60.0%
!! GCGAGCATCATCTGGCTCTG+TGG - chr5_1:46131503-46131522 Msa0733140:three_prime_UTR 60.0%
TAAGCGACCGATGCTCCAGC+CGG - chr5_1:46131567-46131586 Msa0733140:three_prime_UTR 60.0%
CAAGGCCCCCTTATGCAGAC+TGG + chr5_1:46134864-46134883 None:intergenic 60.0%
TTCCTTGCACTGGGATCCCG+AGG - chr5_1:46135086-46135105 Msa0733140:CDS 60.0%
TCCTTGCACTGGGATCCCGA+GGG - chr5_1:46135087-46135106 Msa0733140:CDS 60.0%
GCGCATTCACCTAAGGGACG+AGG - chr5_1:46135134-46135153 Msa0733140:CDS 60.0%
! TTGTGTGTGCGTGTGGTGGG+GGG - chr5_1:46135385-46135404 Msa0733140:CDS 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr5_1:46135718-46135737 None:intergenic 60.0%
CATGCGCATGGTCTGGGAAG+GGG + chr5_1:46135732-46135751 None:intergenic 60.0%
GCATGCGCATGGTCTGGGAA+GGG + chr5_1:46135733-46135752 None:intergenic 60.0%
CTTCCCAGACCATGCGCATG+CGG - chr5_1:46135732-46135751 Msa0733140:intron 60.0%
TTCCCAGACCATGCGCATGC+GGG - chr5_1:46135733-46135752 Msa0733140:intron 60.0%
CTAAAGCTCCCGCATGCGCA+TGG + chr5_1:46135744-46135763 None:intergenic 60.0%
! TGCGCATGCGGGAGCTTTAG+TGG - chr5_1:46135744-46135763 Msa0733140:intron 60.0%
TCAAGTGGGGCAGCACATGC+TGG - chr5_1:46136299-46136318 Msa0733140:intron 60.0%
GGGCAGCACATGCTGGAGAA+GGG - chr5_1:46136306-46136325 Msa0733140:intron 60.0%
GGCAGCACATGCTGGAGAAG+GGG - chr5_1:46136307-46136326 Msa0733140:intron 60.0%
TGGAGAAGGGGCAGGAGAGT+CGG - chr5_1:46136319-46136338 Msa0733140:intron 60.0%
CTATGCAGAAAGCGAGGGGC+TGG - chr5_1:46136608-46136627 Msa0733140:intron 60.0%
!!! AGCGAGGGGCTGGTTTTGTG+TGG - chr5_1:46136618-46136637 Msa0733140:intron 60.0%
!!! GCGAGGGGCTGGTTTTGTGT+GGG - chr5_1:46136619-46136638 Msa0733140:intron 60.0%
!!! CGAGGGGCTGGTTTTGTGTG+GGG - chr5_1:46136620-46136639 Msa0733140:intron 60.0%
! ATCACAACGCCCGTTGGTGG+TGG + chr5_1:46136737-46136756 None:intergenic 60.0%
CCACCTTGGCCAAGTCCCAA+TGG + chr5_1:46137141-46137160 None:intergenic 60.0%
CCATTGGGACTTGGCCAAGG+TGG - chr5_1:46137138-46137157 Msa0733140:intron 60.0%
TCTGGCAATAGTGGTCCCGC+AGG - chr5_1:46137262-46137281 Msa0733140:intron 60.0%
!! GGTTCGGTACACCGGTTCTG+TGG - chr5_1:46137833-46137852 Msa0733140:intron 60.0%
GTTGCCGATGCTCAGGTCAC+AGG - chr5_1:46138508-46138527 Msa0733140:intron 60.0%
ATCCCACGGTCCACTTCCCA+GGG + chr5_1:46139539-46139558 None:intergenic 60.0%
TGCAACAGCTGCCACGGCAA+AGG + chr5_1:46139590-46139609 None:intergenic 60.0%
AAGGGCTGCAACAGCTGCCA+CGG + chr5_1:46139596-46139615 None:intergenic 60.0%
!! CCGGTGGGGGTTTGTTGGAG+TGG + chr5_1:46131306-46131325 None:intergenic 65.0%
CTGGACCGGTGGGGGTTTGT+TGG + chr5_1:46131311-46131330 None:intergenic 65.0%
!! TGGTCGGGTTCTGGACCGGT+GGG + chr5_1:46131321-46131340 None:intergenic 65.0%
!! ATGGTCGGGTTCTGGACCGG+TGG + chr5_1:46131322-46131341 None:intergenic 65.0%
!! GACCGGACGGGAGGTTGATG+TGG + chr5_1:46131345-46131364 None:intergenic 65.0%
AACCTCCCGTCCGGTCCAAC+CGG - chr5_1:46131349-46131368 Msa0733140:three_prime_UTR 65.0%
! CGGATGCGACTCGGAGGAGT+TGG + chr5_1:46131397-46131416 None:intergenic 65.0%
! TGGCTCTGTGGACCGGTCTC+CGG - chr5_1:46131515-46131534 Msa0733140:three_prime_UTR 65.0%
GACCGATGCTCCAGCCGGTT+CGG - chr5_1:46131572-46131591 Msa0733140:three_prime_UTR 65.0%
GGTGGCCGGGATTTGAACCC+CGG - chr5_1:46132437-46132456 Msa0733140:intron 65.0%
TCCCTCGGGATCCCAGTGCA+AGG + chr5_1:46135091-46135110 None:intergenic 65.0%
! TGTGTGTGCGTGTGGTGGGG+GGG - chr5_1:46135386-46135405 Msa0733140:CDS 65.0%
CGCATGCGCATGGTCTGGGA+AGG + chr5_1:46135734-46135753 None:intergenic 65.0%
CTCCCGCATGCGCATGGTCT+GGG + chr5_1:46135738-46135757 None:intergenic 65.0%
GGGGCAGCACATGCTGGAGA+AGG - chr5_1:46136305-46136324 Msa0733140:intron 65.0%
GCACATGCTGGAGAAGGGGC+AGG - chr5_1:46136311-46136330 Msa0733140:intron 65.0%
GGAGAAGGGGCAGGAGAGTC+GGG - chr5_1:46136320-46136339 Msa0733140:intron 65.0%
GGCAGGAGAGTCGGGTAGTG+CGG - chr5_1:46136328-46136347 Msa0733140:intron 65.0%
GCGATCACAACGCCCGTTGG+TGG + chr5_1:46136740-46136759 None:intergenic 65.0%
GCTGCGATCACAACGCCCGT+TGG + chr5_1:46136743-46136762 None:intergenic 65.0%
TGTCCCTGGGAAGTGGACCG+TGG - chr5_1:46139533-46139552 Msa0733140:intron 65.0%
GTCCCTGGGAAGTGGACCGT+GGG - chr5_1:46139534-46139553 Msa0733140:intron 65.0%
GATCCCACGGTCCACTTCCC+AGG + chr5_1:46139540-46139559 None:intergenic 65.0%
ACAGCTGCCACGGCAAAGGC+TGG + chr5_1:46139586-46139605 None:intergenic 65.0%
!! GTCGGGTTCTGGACCGGTGG+GGG + chr5_1:46131319-46131338 None:intergenic 70.0%
!! GGTCGGGTTCTGGACCGGTG+GGG + chr5_1:46131320-46131339 None:intergenic 70.0%
AACCGGTTGGACCGGACGGG+AGG + chr5_1:46131354-46131373 None:intergenic 70.0%
GGCCGAACCGGCTGGAGCAT+CGG + chr5_1:46131577-46131596 None:intergenic 70.0%
ACGGTCTCCGACGGCCGAAC+CGG + chr5_1:46131589-46131608 None:intergenic 70.0%
GCTCCCGCATGCGCATGGTC+TGG + chr5_1:46135739-46135758 None:intergenic 70.0%
!! GCTCCAGCCGGTTCGGCCGT+CGG - chr5_1:46131579-46131598 Msa0733140:three_prime_UTR 75.0%
TCTCCGACGGCCGAACCGGC+TGG + chr5_1:46131585-46131604 None:intergenic 75.0%
! GTGTGCGTGTGGTGGGGGGG+TGG - chr5_1:46135389-46135408 Msa0733140:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 46131147 46140434 46131147 ID=Msa0733140;Name=Msa0733140
chr5_1 mRNA 46131147 46140434 46131147 ID=Msa0733140-mRNA-1;Parent=Msa0733140;Name=Msa0733140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=146|1|1|1|0.8|0.66|6|729|509
chr5_1 exon 46131147 46131199 46131147 ID=Msa0733140-mRNA-1:exon:13178;Parent=Msa0733140-mRNA-1
chr5_1 exon 46131221 46132055 46131221 ID=Msa0733140-mRNA-1:exon:13177;Parent=Msa0733140-mRNA-1
chr5_1 exon 46134298 46134341 46134298 ID=Msa0733140-mRNA-1:exon:13176;Parent=Msa0733140-mRNA-1
chr5_1 exon 46134425 46134488 46134425 ID=Msa0733140-mRNA-1:exon:13175;Parent=Msa0733140-mRNA-1
chr5_1 exon 46134782 46135524 46134782 ID=Msa0733140-mRNA-1:exon:13174;Parent=Msa0733140-mRNA-1
chr5_1 exon 46139769 46140434 46139769 ID=Msa0733140-mRNA-1:exon:13173;Parent=Msa0733140-mRNA-1
chr5_1 five_prime_UTR 46140289 46140434 46140289 ID=Msa0733140-mRNA-1:five_prime_utr;Parent=Msa0733140-mRNA-1
chr5_1 CDS 46139769 46140288 46139769 ID=Msa0733140-mRNA-1:cds;Parent=Msa0733140-mRNA-1
chr5_1 CDS 46134782 46135524 46134782 ID=Msa0733140-mRNA-1:cds;Parent=Msa0733140-mRNA-1
chr5_1 CDS 46134425 46134488 46134425 ID=Msa0733140-mRNA-1:cds;Parent=Msa0733140-mRNA-1
chr5_1 CDS 46134298 46134341 46134298 ID=Msa0733140-mRNA-1:cds;Parent=Msa0733140-mRNA-1
chr5_1 CDS 46131897 46132055 46131897 ID=Msa0733140-mRNA-1:cds;Parent=Msa0733140-mRNA-1
chr5_1 three_prime_UTR 46131221 46131896 46131221 ID=Msa0733140-mRNA-1:three_prime_utr;Parent=Msa0733140-mRNA-1
chr5_1 three_prime_UTR 46131147 46131199 46131147 ID=Msa0733140-mRNA-1:three_prime_utr;Parent=Msa0733140-mRNA-1
Gene Sequence

>Msa0733140

ATGCCGAATCCCACTCCAACAAACCCCCACCGGTCCAGAACCCGACCATCCACATCAACCTCCCGTCCGGTCCAACCGGTTCAACCACGAACCCCCTTACGCCAACTCCTCCGAGTCGCATCCGTAGCAAGCGGAATCCAATTCGGTTGGGCTTTACAGCTCTCTCTCTTAACCCCTTACGTTCAACAACTCGGTATCCCTCATAAATGGGCGAGCATCATCTGGCTCTGTGGACCGGTCTCCGGTTTATTCGTCCAACCATTAGTCGGTCATTTAAGCGACCGATGCTCCAGCCGGTTCGGCCGTCGGAGACCGTTTATTTTAGTCGGCGCGGCGTCGATCGTCCTTGCCGTTGTTATAATTGGTTATGCTGCTGATATTGGTTACTTGATCGGTGATGATATAACGCAGAATTATCGTCCTTTTGCTATAGTTGTTTTTGTGATTGGGTTTTGGATTCTTGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCTTTACTCGCTGATCTTACTTGCAATGATGCTCGAAGGACGCGTGTTGCAAATGCCTATTTCTCCCTGTTTATGGCTGTTGGTAACATTCTTGGCTATGCAACTGGATCATACAGTGGCTGGTACAAGATTTTTACTTTCACACTTACTCCTGCTTGCTCTATTAGTTGTGCAAATCTCAAGTCTGCGTTCTTTCTCGACGTTGGTTTCATTGCGGTAACGACATATCTCAGTATTGTGTCAGCTAATGAAGTGCCTCTAAGTTCAAGTGGGGCAGCACATGCTGGAGAAGGGGCAGGAGAGTCGGGTAGTGCGGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTTAAATATTTTTCAATGCCTGTATGGATAGTACTGTCTGTAACTGCTCTGACATGGATTGGATGGTTCCCATTTATGCTCTTTGATACTGATTGGATGGGTCGGGAAATTTATGGTGGTGATCCAGAAGGAGGCCTTATTTATGATACTGGGGTTAGAATGGGAGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTGCTCATGGAAAGGCTATGCAGAAAGCGAGGGGCTGGTTTTGTGTGGGGACTCTCAAATATCTTTATGGCTATTTGCTTTATTGCAATGTTAGTATTAACCTATGCGGCAAATAGCATTGGCTACGTAAGTAAAGCTCAACCACCACCAACGGGCGTTGTGATCGCAGCAATAGCAATCTTTACCGTTCTTGGGTTTCCAATGGCAATCACTTATAGTGTTCCATATGCCTTAATTTCAACGCATATCGAACCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATAGTGGTCCCGCAGATTGTGGTGTCCCTGGGAAGTGGACCGTGGGATCAATTATTTGGTGGAGGAAACTCTCCAGCCTTTGCCGTGGCAGCTGTTGCAGCCCTTTTGAGTGGACTCCTGGCTCTATTAGCTATTCCCCGAACTCGTACGCAAAAGCCTAGAGTCCGCATATGA
Protein sequence

>Msa0733140

MPNPTPTNPHRSRTRPSTSTSRPVQPVQPRTPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHKWASIIWLCGPVSGLFVQPLVGHLSDRCSSRFGRRRPFILVGAASIVLAVVIIGYAADIGYLIGDDITQNYRPFAIVVFVIGFWILDVANNVTQGPCRALLADLTCNDARRTRVANAYFSLFMAVGNILGYATGSYSGWYKIFTFTLTPACSISCANLKSAFFLDVGFIAVTTYLSIVSANEVPLSSSGAAHAGEGAGESGSAEEAFMWELFGTFKYFSMPVWIVLSVTALTWIGWFPFMLFDTDWMGREIYGGDPEGGLIYDTGVRMGALGLLLNSVVLGVTSLLMERLCRKRGAGFVWGLSNIFMAICFIAMLVLTYAANSIGYVSKAQPPPTGVVIAAIAIFTVLGFPMAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIVVSLGSGPWDQLFGGGNSPAFAVAAVAALLSGLLALLAIPRTRTQKPRVRI*