Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707040 | XP_013447253.1 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707040 | sp|Q9C723|NADE_ARATH | 79.564 | 734 | 134 | 3 | 1 | 727 | 1 | 725 | 0.0 | 1249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707040 | A0A072U616 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0707040 | 0.824728 | 6.895735e-54 | -8.615850e-47 |
| Msa0012780 | Msa0707040 | -0.864006 | 1.657803e-64 | -8.615850e-47 |
| Msa0012820 | Msa0707040 | -0.815478 | 9.055988e-52 | -8.615850e-47 |
| Msa0017420 | Msa0707040 | 0.803763 | 2.984313e-49 | -8.615850e-47 |
| Msa0026930 | Msa0707040 | 0.802042 | 6.768191e-49 | -8.615850e-47 |
| Msa0029020 | Msa0707040 | -0.814372 | 1.593113e-51 | -8.615850e-47 |
| Msa0035110 | Msa0707040 | 0.806157 | 9.427236e-50 | -8.615850e-47 |
| Msa0053960 | Msa0707040 | 0.810053 | 1.395712e-50 | -8.615850e-47 |
| Msa0061590 | Msa0707040 | -0.818176 | 2.247057e-52 | -8.615850e-47 |
| Msa0061600 | Msa0707040 | -0.827370 | 1.624281e-54 | -8.615850e-47 |
| Msa0064550 | Msa0707040 | 0.807685 | 4.479908e-50 | -8.615850e-47 |
| Msa0072830 | Msa0707040 | 0.803634 | 3.173827e-49 | -8.615850e-47 |
| Msa0072860 | Msa0707040 | 0.807538 | 4.814305e-50 | -8.615850e-47 |
| Msa0096510 | Msa0707040 | 0.822152 | 2.760511e-53 | -8.615850e-47 |
| Msa0104360 | Msa0707040 | 0.815129 | 1.082890e-51 | -8.615850e-47 |
| Msa0106110 | Msa0707040 | -0.854817 | 9.557663e-62 | -8.615850e-47 |
| Msa0106130 | Msa0707040 | -0.812618 | 3.872284e-51 | -8.615850e-47 |
| Msa0109490 | Msa0707040 | 0.808562 | 2.914123e-50 | -8.615850e-47 |
| Msa0627050 | Msa0707040 | 0.801964 | 7.022224e-49 | -8.615850e-47 |
| Msa0629980 | Msa0707040 | 0.800190 | 1.619202e-48 | -8.615850e-47 |
| Msa0646570 | Msa0707040 | 0.809244 | 2.082779e-50 | -8.615850e-47 |
| Msa0650360 | Msa0707040 | 0.822022 | 2.957756e-53 | -8.615850e-47 |
| Msa0651400 | Msa0707040 | 0.803339 | 3.654050e-49 | -8.615850e-47 |
| Msa0668090 | Msa0707040 | 0.812827 | 3.484860e-51 | -8.615850e-47 |
| Msa0675010 | Msa0707040 | 0.842007 | 3.363059e-58 | -8.615850e-47 |
| Msa0707040 | Msa0749150 | 0.804223 | 2.394432e-49 | -8.615850e-47 |
| Msa0707040 | Msa0752580 | 0.810024 | 1.415395e-50 | -8.615850e-47 |
| Msa0707040 | Msa0754500 | 0.805693 | 1.179886e-49 | -8.615850e-47 |
| Msa0707040 | Msa0775580 | 0.811282 | 7.568483e-51 | -8.615850e-47 |
| Msa0707040 | Msa0780140 | 0.802815 | 4.690242e-49 | -8.615850e-47 |
| Msa0707040 | Msa0792510 | 0.815816 | 7.613858e-52 | -8.615850e-47 |
| Msa0707040 | Msa0792880 | 0.804813 | 1.803879e-49 | -8.615850e-47 |
| Msa0707040 | Msa0812970 | 0.805234 | 1.472930e-49 | -8.615850e-47 |
| Msa0707040 | Msa0824140 | 0.800271 | 1.558373e-48 | -8.615850e-47 |
| Msa0707040 | Msa0826650 | 0.801815 | 7.534522e-49 | -8.615850e-47 |
| Msa0707040 | Msa0828570 | 0.802751 | 4.834294e-49 | -8.615850e-47 |
| Msa0707040 | Msa0828900 | 0.808719 | 2.697785e-50 | -8.615850e-47 |
| Msa0707040 | Msa0853480 | 0.800756 | 1.241421e-48 | -8.615850e-47 |
| Msa0707040 | Msa0853500 | 0.809619 | 1.729971e-50 | -8.615850e-47 |
| Msa0707040 | Msa0863250 | 0.805594 | 1.237849e-49 | -8.615850e-47 |
| Msa0707040 | Msa0864690 | 0.802015 | 6.856527e-49 | -8.615850e-47 |
| Msa0707040 | Msa0902980 | 0.807788 | 4.259057e-50 | -8.615850e-47 |
| Msa0707040 | Msa0909710 | 0.807287 | 5.441834e-50 | -8.615850e-47 |
| Msa0707040 | Msa0929400 | 0.816061 | 6.714608e-52 | -8.615850e-47 |
| Msa0707040 | Msa0948050 | -0.832873 | 7.373393e-56 | -8.615850e-47 |
| Msa0707040 | Msa0970050 | 0.817648 | 2.956719e-52 | -8.615850e-47 |
| Msa0707040 | Msa0981740 | 0.824780 | 6.706169e-54 | -8.615850e-47 |
| Msa0707040 | Msa0984460 | -0.814003 | 1.921659e-51 | -8.615850e-47 |
| Msa0707040 | Msa1004210 | 0.834386 | 3.089253e-56 | -8.615850e-47 |
| Msa0707040 | Msa1004260 | 0.827626 | 1.410334e-54 | -8.615850e-47 |
| Msa0707040 | Msa1018020 | -0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0707040 | Msa1036390 | 0.810342 | 1.208682e-50 | -8.615850e-47 |
| Msa0707040 | Msa1046610 | 0.830674 | 2.571648e-55 | -8.615850e-47 |
| Msa0707040 | Msa1064210 | 0.804351 | 2.252334e-49 | -8.615850e-47 |
| Msa0707040 | Msa1076680 | 0.825614 | 4.257786e-54 | -8.615850e-47 |
| Msa0707040 | Msa1080460 | 0.832911 | 7.214211e-56 | -8.615850e-47 |
| Msa0707040 | Msa1093390 | 0.810622 | 1.051609e-50 | -8.615850e-47 |
| Msa0707040 | Msa1102540 | 0.815907 | 7.268605e-52 | -8.615850e-47 |
| Msa0707040 | Msa1126170 | 0.804744 | 1.865202e-49 | -8.615850e-47 |
| Msa0707040 | Msa1133530 | 0.990578 | 2.643715e-183 | -8.615850e-47 |
| Msa0707040 | Msa1138450 | 0.837476 | 5.082491e-57 | -8.615850e-47 |
| Msa0707040 | Msa1138480 | 0.824219 | 9.085645e-54 | -8.615850e-47 |
| Msa0707040 | Msa1151820 | 0.819268 | 1.269899e-52 | -8.615850e-47 |
| Msa0707040 | Msa1167000 | 0.821089 | 4.859342e-53 | -8.615850e-47 |
| Msa0707040 | Msa1173380 | 0.820921 | 5.310973e-53 | -8.615850e-47 |
| Msa0707040 | Msa1182830 | 0.849777 | 2.599990e-60 | -8.615850e-47 |
| Msa0707040 | Msa1191390 | 0.814957 | 1.182306e-51 | -8.615850e-47 |
| Msa0707040 | Msa1199610 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0707040 | Msa1222580 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0707040 | Msa1258280 | 0.824151 | 9.426237e-54 | -8.615850e-47 |
| Msa0707040 | Msa1298290 | 0.803813 | 2.914719e-49 | -8.615850e-47 |
| Msa0707040 | Msa1326000 | 0.815848 | 7.489923e-52 | -8.615850e-47 |
| Msa0707040 | Msa1328750 | 0.848280 | 6.779930e-60 | -8.615850e-47 |
| Msa0707040 | Msa1365120 | 0.819280 | 1.261694e-52 | -8.615850e-47 |
| Msa0707040 | Msa1373950 | 0.820386 | 7.050301e-53 | -8.615850e-47 |
| Msa0707040 | Msa1386020 | 0.800012 | 1.759696e-48 | -8.615850e-47 |
| Msa0707040 | Msa1418200 | 0.802945 | 4.408326e-49 | -8.615850e-47 |
| Msa0707040 | Msa1430760 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
| Msa0707040 | Msa1431240 | 0.827328 | 1.662451e-54 | -8.615850e-47 |
| Msa0707040 | Msa1447160 | -0.800722 | 1.261068e-48 | -8.615850e-47 |
| Msa0707040 | Msa1460310 | -0.851641 | 7.775059e-61 | -8.615850e-47 |
| Msa0152640 | Msa0707040 | -0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa0152740 | Msa0707040 | -0.831361 | 1.743466e-55 | -8.615850e-47 |
| Msa0153440 | Msa0707040 | 0.825833 | 3.778735e-54 | -8.615850e-47 |
| Msa0154240 | Msa0707040 | 0.807905 | 4.023433e-50 | -8.615850e-47 |
| Msa0199740 | Msa0707040 | 0.833847 | 4.215991e-56 | -8.615850e-47 |
| Msa0389060 | Msa0707040 | 0.813642 | 2.308040e-51 | -8.615850e-47 |
| Msa0405250 | Msa0707040 | -0.829930 | 3.906262e-55 | -8.615850e-47 |
| Msa0458790 | Msa0707040 | 0.808754 | 2.651962e-50 | -8.615850e-47 |
| Msa0242290 | Msa0707040 | 0.813134 | 2.985564e-51 | -8.615850e-47 |
| Msa0264940 | Msa0707040 | -0.850132 | 2.068783e-60 | -8.615850e-47 |
| Msa0265980 | Msa0707040 | -0.801250 | 9.837870e-49 | -8.615850e-47 |
| Msa0270840 | Msa0707040 | 0.837849 | 4.077868e-57 | -8.615850e-47 |
| Msa0298940 | Msa0707040 | 0.812648 | 3.814494e-51 | -8.615850e-47 |
| Msa0302990 | Msa0707040 | -0.850888 | 1.268942e-60 | -8.615850e-47 |
| Msa0354390 | Msa0707040 | 0.801639 | 8.188976e-49 | -8.615850e-47 |
| Msa0514330 | Msa0707040 | -0.814487 | 1.502628e-51 | -8.615850e-47 |
| Msa0524050 | Msa0707040 | 0.813196 | 2.892699e-51 | -8.615850e-47 |
| Msa0530340 | Msa0707040 | 0.808145 | 3.576582e-50 | -8.615850e-47 |
| Msa0535020 | Msa0707040 | 0.808816 | 2.571706e-50 | -8.615850e-47 |
| Msa0535050 | Msa0707040 | 0.800521 | 1.386056e-48 | -8.615850e-47 |
| Msa0545230 | Msa0707040 | 0.817883 | 2.617698e-52 | -8.615850e-47 |
| Msa0573000 | Msa0707040 | 0.912024 | 3.124152e-83 | -8.615850e-47 |
| Msa0589600 | Msa0707040 | 0.800092 | 1.694723e-48 | -8.615850e-47 |
| Msa0589640 | Msa0707040 | 0.807260 | 5.512686e-50 | -8.615850e-47 |
| Msa0600820 | Msa0707040 | 0.820417 | 6.936355e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707040 | MtrunA17_Chr8g0388731 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707040 | AT1G55090.1 | 79.564 | 734 | 134 | 3 | 1 | 727 | 1 | 725 | 0.0 | 1249 |
Find 209 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTCTGCTCCCTCTTTC+TGG | 0.065747 | 4_4:+80276301 | Msa0707040:CDS |
| CAACATCATTTAAAGAAAAT+TGG | 0.105248 | 4_4:-80275547 | None:intergenic |
| CATGCTGAGCTTGCATTAAA+TGG | 0.156645 | 4_4:+80275117 | Msa0707040:CDS |
| TACGAGGAACTATCTGTTTA+TGG | 0.202343 | 4_4:+80279137 | Msa0707040:CDS |
| TTGGACCTGGTTGCTGGTTA+TGG | 0.219491 | 4_4:+80276251 | Msa0707040:CDS |
| ATCTTGCATTATAAAGAAAT+TGG | 0.239593 | 4_4:-80280502 | None:intergenic |
| GTTATTCACCAGAGGATAAT+AGG | 0.260783 | 4_4:+80280468 | Msa0707040:CDS |
| TTCAATTAGATTCCGACATT+TGG | 0.271951 | 4_4:-80280668 | None:intergenic |
| GATGACGGCGCCGGCTTGTT+TGG | 0.281693 | 4_4:-80273698 | None:intergenic |
| ATGGAATCTATATATTTGTT+TGG | 0.281745 | 4_4:-80280760 | None:intergenic |
| TGGTCCAGTTTCCATGTTCC+AGG | 0.285193 | 4_4:+80279184 | Msa0707040:CDS |
| CCATCTTGGTTACTCATCTT+TGG | 0.286324 | 4_4:+80278573 | Msa0707040:CDS |
| TCCTCTGTTGCTGCGATTGT+TGG | 0.297915 | 4_4:+80276337 | Msa0707040:CDS |
| CACCTTGATGTTAGCATTGA+TGG | 0.301302 | 4_4:+80277451 | Msa0707040:CDS |
| TGGACCTGGTTGCTGGTTAT+GGG | 0.301739 | 4_4:+80276252 | Msa0707040:CDS |
| ACGCCTTTCTGTTCCTCTTA+AGG | 0.304612 | 4_4:+80275812 | Msa0707040:CDS |
| TGTTCCAGTGTTGTGGTTAA+TGG | 0.316625 | 4_4:+80275503 | Msa0707040:CDS |
| TCCTCATGTTTCTGAGGCAT+TGG | 0.318545 | 4_4:+80274124 | Msa0707040:CDS |
| GAGTTATTACGAATGGTTAA+TGG | 0.319596 | 4_4:-80273785 | None:intergenic |
| CAAGATGGCCGTATCAATTT+CGG | 0.328849 | 4_4:+80280519 | Msa0707040:CDS |
| AAATCAGTTCCATTTGGTTA+TGG | 0.330419 | 4_4:+80274152 | Msa0707040:CDS |
| GCAGCTTGATGAAGTTGATA+TGG | 0.333483 | 4_4:+80279106 | Msa0707040:intron |
| TGGAGATGGAGTCTTTGATT+TGG | 0.334425 | 4_4:-80273672 | None:intergenic |
| GGAGTTGCTGCCGCAGGTTC+AGG | 0.335423 | 4_4:+80280641 | Msa0707040:CDS |
| GTCTTTGATTTGGAGAAGAT+TGG | 0.335730 | 4_4:-80273662 | None:intergenic |
| TGGTAGGTTGCAAGCCTTAG+AGG | 0.338452 | 4_4:+80275693 | Msa0707040:intron |
| CATCAAGCTTTCTAAGTTGA+TGG | 0.339716 | 4_4:-80275173 | None:intergenic |
| GGCGCCGGCTTGTTTGGATT+TGG | 0.343154 | 4_4:-80273692 | None:intergenic |
| TCAAGTATTATTCGATAAAT+CGG | 0.347943 | 4_4:+80280258 | Msa0707040:CDS |
| CTCTCGGAACCTTTGATAAT+AGG | 0.348000 | 4_4:-80273957 | None:intergenic |
| TGGAATCTATATATTTGTTT+GGG | 0.353804 | 4_4:-80280759 | None:intergenic |
| TAGCATTTGGACCTGGTTGC+TGG | 0.357685 | 4_4:+80276245 | Msa0707040:CDS |
| CACAGTATAAAATACTCTTT+TGG | 0.361951 | 4_4:-80276992 | None:intergenic |
| AGCTCCACCCACAGCTGAAC+TGG | 0.364040 | 4_4:+80278609 | Msa0707040:CDS |
| CATGTGCAAGACTGCAAATC+TGG | 0.364062 | 4_4:+80280736 | Msa0707040:three_prime_UTR |
| CCTTGGGTTCACAACAAACC+TGG | 0.370888 | 4_4:+80278134 | Msa0707040:CDS |
| ATGCTGAGCTTGCATTAAAT+GGG | 0.371833 | 4_4:+80275118 | Msa0707040:CDS |
| ATCATTTGCAAGCCACATCT+TGG | 0.378781 | 4_4:-80274030 | None:intergenic |
| TGTTAGCATCACTCTTGCCT+TGG | 0.378857 | 4_4:+80278117 | Msa0707040:CDS |
| GTGGTCTTCACAGCCATAAC+CGG | 0.383872 | 4_4:-80273746 | None:intergenic |
| TCTTTGTTTCAAACACTTAC+GGG | 0.384485 | 4_4:+80277493 | Msa0707040:CDS |
| GTCTTTGTTTCAAACACTTA+CGG | 0.384605 | 4_4:+80277492 | Msa0707040:CDS |
| GACAATAAACTAACCTTAAG+AGG | 0.386044 | 4_4:-80275825 | None:intergenic |
| GTTAGCATCACTCTTGCCTT+GGG | 0.387419 | 4_4:+80278118 | Msa0707040:CDS |
| AAGAAATATTGATTGGTGAT+TGG | 0.389174 | 4_4:+80273904 | Msa0707040:CDS |
| AACATCATTTAAAGAAAATT+GGG | 0.390775 | 4_4:-80275546 | None:intergenic |
| TTACGAAGAAGTGGAGCATC+TGG | 0.393568 | 4_4:+80276280 | Msa0707040:CDS |
| CCTCATGTTTCTGAGGCATT+GGG | 0.396761 | 4_4:+80274125 | Msa0707040:CDS |
| ATAACCGGGGATTTCGAGTT+CGG | 0.397139 | 4_4:-80273731 | None:intergenic |
| CGGATTGGAAACTATATAGA+TGG | 0.397855 | 4_4:+80276940 | Msa0707040:CDS |
| CTATAACAAACTGAACTTGT+TGG | 0.398444 | 4_4:+80280940 | Msa0707040:three_prime_UTR |
| TTTCCTTCAGAAATTGCAAA+TGG | 0.399802 | 4_4:+80276889 | Msa0707040:intron |
| ACTACATACCTCGGCATGAT+AGG | 0.403171 | 4_4:-80280306 | None:intergenic |
| AAAGGAAGACAAAGACTATA+TGG | 0.406257 | 4_4:-80275777 | None:intergenic |
| CCTGAGGAGGAAATAGCATT+TGG | 0.407961 | 4_4:+80276232 | Msa0707040:CDS |
| CTTTACAACTTGCTTGCTCT+TGG | 0.410098 | 4_4:-80275731 | None:intergenic |
| AGCTACTTAAAGATCCTCTA+AGG | 0.411025 | 4_4:-80275707 | None:intergenic |
| AAGGTACTGGCAGAGGAAAT+TGG | 0.413079 | 4_4:+80277421 | Msa0707040:CDS |
| TATACCTGGAACATGGAAAC+TGG | 0.415696 | 4_4:-80279188 | None:intergenic |
| AACTTCGATGGTTTACTGCT+TGG | 0.416004 | 4_4:+80274066 | Msa0707040:CDS |
| TTTAAATGATGTTGAGGTTG+TGG | 0.424124 | 4_4:+80275556 | Msa0707040:CDS |
| CGATGGGCAGCCAGCCATCT+TGG | 0.433435 | 4_4:+80278559 | Msa0707040:CDS |
| TTAGATGGTGTTGGTGGAAT+GGG | 0.436891 | 4_4:+80280620 | Msa0707040:CDS |
| GTCTCTGTTGTTTGTTGAAG+TGG | 0.441826 | 4_4:-80273553 | None:intergenic |
| GATGGTGGTCGCCTTTACTA+TGG | 0.445130 | 4_4:+80275270 | Msa0707040:CDS |
| GAACTCGAAATCCCCGGTTA+TGG | 0.445759 | 4_4:+80273733 | Msa0707040:CDS |
| ACTTACCTTTCACGACCATC+TGG | 0.449690 | 4_4:-80276369 | None:intergenic |
| TAACCGGGGATTTCGAGTTC+GGG | 0.455865 | 4_4:-80273730 | None:intergenic |
| TTCCTTCAGAAATTGCAAAT+GGG | 0.460972 | 4_4:+80276890 | Msa0707040:intron |
| TTCCGAGAGATACAATTGTC+AGG | 0.462968 | 4_4:+80273971 | Msa0707040:CDS |
| CAATCTCAACCAATGGGCTA+TGG | 0.470887 | 4_4:+80273630 | Msa0707040:CDS |
| TCAGTGGCAGCTTCATTAGA+TGG | 0.472410 | 4_4:+80280605 | Msa0707040:CDS |
| GTGTTTGAAACAAAGACAAA+AGG | 0.472972 | 4_4:-80277486 | None:intergenic |
| TCATTTGCAAGCCACATCTT+GGG | 0.476765 | 4_4:-80274029 | None:intergenic |
| TCTACGAAGTTACTCAATCT+AGG | 0.477408 | 4_4:-80273489 | None:intergenic |
| GCCGGCGCCGTCATCCGTCT+TGG | 0.477437 | 4_4:+80273706 | Msa0707040:CDS |
| CGATGAACTCGTACATGAGC+TGG | 0.481111 | 4_4:+80280547 | Msa0707040:CDS |
| TACACTACACATGGGATGAA+AGG | 0.481794 | 4_4:-80280817 | None:intergenic |
| CTCAGAATCTATGTTACAGA+TGG | 0.482926 | 4_4:+80280186 | Msa0707040:intron |
| GGCTTGTTTGGATTTGGAGA+TGG | 0.485111 | 4_4:-80273686 | None:intergenic |
| GATGGCTGGCTGCCCATCGC+AGG | 0.487074 | 4_4:-80278555 | None:intergenic |
| TGTTTGAAAGAAATATTGAT+TGG | 0.487416 | 4_4:+80273897 | Msa0707040:CDS |
| GGGAGCTCCAACGTGGATGA+AGG | 0.489079 | 4_4:+80278173 | Msa0707040:CDS |
| GATAACATAGTGTGTAGTAT+TGG | 0.489547 | 4_4:+80273930 | Msa0707040:CDS |
| TGTTTATGGGATCTGAAAAC+AGG | 0.489699 | 4_4:+80277013 | Msa0707040:CDS |
| CCAAATGCTATTTCCTCCTC+AGG | 0.490563 | 4_4:-80276232 | None:intergenic |
| ATCTTCGGTCATTCCTGCGA+TGG | 0.492236 | 4_4:+80278542 | Msa0707040:CDS |
| ACACTACACATGGGATGAAA+GGG | 0.496650 | 4_4:-80280816 | None:intergenic |
| AATGGTGATGTTGTTGCTCA+AGG | 0.499320 | 4_4:+80275521 | Msa0707040:CDS |
| TGGCAGAGGAAATTGGTTCA+TGG | 0.503133 | 4_4:+80277428 | Msa0707040:CDS |
| TTAACAAAACCATAACCAAA+TGG | 0.503166 | 4_4:-80274161 | None:intergenic |
| ACTTCCTCCTCATGTTTCTG+AGG | 0.509841 | 4_4:+80274118 | Msa0707040:CDS |
| CTGCTTACTTATACTGCCAA+TGG | 0.510061 | 4_4:-80278518 | None:intergenic |
| GTATAAGTAAGCAGGATCTT+CGG | 0.511899 | 4_4:+80278527 | Msa0707040:CDS |
| ATTAGATGGTGTTGGTGGAA+TGG | 0.513323 | 4_4:+80280619 | Msa0707040:CDS |
| AATCACGATGAGGCTCTTGA+AGG | 0.517734 | 4_4:+80273597 | Msa0707040:exon |
| CATTGGCAGTATAAGTAAGC+AGG | 0.517825 | 4_4:+80278519 | Msa0707040:CDS |
| TCCAAGACGGATGACGGCGC+CGG | 0.522702 | 4_4:-80273707 | None:intergenic |
| AAAGCTGATGCAATACGGAT+TGG | 0.522800 | 4_4:+80276925 | Msa0707040:CDS |
| GGCGACCACCATCACAGCCT+TGG | 0.524751 | 4_4:-80275260 | None:intergenic |
| AATTTCTTTATAATGCAAGA+TGG | 0.525324 | 4_4:+80280504 | Msa0707040:CDS |
| GTTTACTGCTTGGAAACAAA+GGG | 0.526848 | 4_4:+80274076 | Msa0707040:CDS |
| AAGGTCGCGAGCCAAGGTAC+TGG | 0.527618 | 4_4:+80277408 | Msa0707040:CDS |
| TACTTGCAATCTCAACCAAT+GGG | 0.527623 | 4_4:+80273624 | Msa0707040:CDS |
| CTTGGGTTCACAACAAACCT+GGG | 0.529526 | 4_4:+80278135 | Msa0707040:CDS |
| TCCTTCAGAAATTGCAAATG+GGG | 0.529905 | 4_4:+80276891 | Msa0707040:intron |
| TGTTTGAAACAAAGACAAAA+GGG | 0.530094 | 4_4:-80277485 | None:intergenic |
| AACCTGACAATTGTATCTCT+CGG | 0.530713 | 4_4:-80273973 | None:intergenic |
| CTGTCTGCTCCACCAGAAAG+AGG | 0.531787 | 4_4:-80276313 | None:intergenic |
| TGGGATTATTTACGAAGAAG+TGG | 0.532803 | 4_4:+80276271 | Msa0707040:CDS |
| GCAAATTCTGTGCTGTCTGT+AGG | 0.533182 | 4_4:-80276970 | None:intergenic |
| TGGTCTTCACAGCCATAACC+GGG | 0.535392 | 4_4:-80273745 | None:intergenic |
| AAGTTAAAGCTGATGCAATA+CGG | 0.540512 | 4_4:+80276920 | Msa0707040:CDS |
| TGCTTACTTATACTGCCAAT+GGG | 0.542445 | 4_4:-80278517 | None:intergenic |
| AATTTCCTCTGCCAGTACCT+TGG | 0.542921 | 4_4:-80277419 | None:intergenic |
| GCAAGCAAGTTGTAAAGTCA+AGG | 0.543230 | 4_4:+80275737 | Msa0707040:CDS |
| ATTGGAATGCCTATTATCAA+AGG | 0.545628 | 4_4:+80273948 | Msa0707040:CDS |
| TTTCTGCTCCCTCTTTCTGG+TGG | 0.545789 | 4_4:+80276304 | Msa0707040:CDS |
| CAGCTTGATGAAGTTGATAT+GGG | 0.547546 | 4_4:+80279107 | Msa0707040:intron |
| AGATCAAACCTATTATCCTC+TGG | 0.548297 | 4_4:-80280476 | None:intergenic |
| GGTTTACTGCTTGGAAACAA+AGG | 0.548451 | 4_4:+80274075 | Msa0707040:CDS |
| GGCTCCAGTTCAGCTGTGGG+TGG | 0.548598 | 4_4:-80278613 | None:intergenic |
| CTCCATCAATGCTAACATCA+AGG | 0.548950 | 4_4:-80277453 | None:intergenic |
| CTACTTGCAATCTCAACCAA+TGG | 0.551398 | 4_4:+80273623 | Msa0707040:CDS |
| TCAGAATCTATGTTACAGAT+GGG | 0.553971 | 4_4:+80280187 | Msa0707040:intron |
| GCGAGCCAAGGTACTGGCAG+AGG | 0.554709 | 4_4:+80277414 | Msa0707040:CDS |
| GCAGCTTCATTAGATGGTGT+TGG | 0.556086 | 4_4:+80280611 | Msa0707040:CDS |
| TGACTGTAGTTAGAACGTAT+AGG | 0.558038 | 4_4:-80278634 | None:intergenic |
| GGGAAAGCGACCACGCTACA+AGG | 0.558835 | 4_4:+80277513 | Msa0707040:CDS |
| AATCGAATTCCATAGCCCAT+TGG | 0.559414 | 4_4:-80273639 | None:intergenic |
| GAAGTTGAAAATCATCAAGT+TGG | 0.562415 | 4_4:-80274100 | None:intergenic |
| TTCGGGTCCAAGACGGATGA+CGG | 0.562754 | 4_4:-80273713 | None:intergenic |
| GTAATTACAGAGAACTTCGA+TGG | 0.562942 | 4_4:+80274054 | Msa0707040:CDS |
| AGTAATCACCAAGGCTGTGA+TGG | 0.563160 | 4_4:+80275252 | Msa0707040:CDS |
| GCTTCATTAGATGGTGTTGG+TGG | 0.563347 | 4_4:+80280614 | Msa0707040:CDS |
| TATACGTTCTAACTACAGTC+AGG | 0.563485 | 4_4:+80278636 | Msa0707040:CDS |
| ATCTCCAAATCCAAACAAGC+CGG | 0.565116 | 4_4:+80273688 | Msa0707040:CDS |
| TATAGGCTCCAGTTCAGCTG+TGG | 0.566047 | 4_4:-80278617 | None:intergenic |
| CCAGGTTTGTTGTGAACCCA+AGG | 0.567416 | 4_4:-80278134 | None:intergenic |
| CATGAGATATACCTGGAACA+TGG | 0.570810 | 4_4:-80279195 | None:intergenic |
| TCTTCGGTCATTCCTGCGAT+GGG | 0.572859 | 4_4:+80278543 | Msa0707040:CDS |
| AATGACAAGGTCGCGAGCCA+AGG | 0.572991 | 4_4:+80277402 | Msa0707040:CDS |
| ATGAAGCTGCCACTGACTCA+TGG | 0.573520 | 4_4:-80280598 | None:intergenic |
| ATTTGGATTGCCTGAACCTG+CGG | 0.574902 | 4_4:-80280651 | None:intergenic |
| AGATGACGATGCAATATGAA+AGG | 0.575590 | 4_4:+80280895 | Msa0707040:three_prime_UTR |
| AGATGAGTAACCAAGATGGC+TGG | 0.577528 | 4_4:-80278569 | None:intergenic |
| TTGTTTATACAGGTAGATGG+TGG | 0.580190 | 4_4:+80278029 | Msa0707040:intron |
| TTTCGAGTTCGGGTCCAAGA+CGG | 0.582536 | 4_4:-80273720 | None:intergenic |
| AAATTGCGAGAGGGTCGGTA+TGG | 0.582929 | 4_4:-80273530 | None:intergenic |
| ATCACCATTAACCACAACAC+TGG | 0.583409 | 4_4:-80275507 | None:intergenic |
| CATACCTCGGCATGATAGGA+AGG | 0.583769 | 4_4:-80280302 | None:intergenic |
| GGAATGGGAGTTGCTGCCGC+AGG | 0.585359 | 4_4:+80280635 | Msa0707040:CDS |
| CATTCAAGCTCGAATCAGAA+TGG | 0.587686 | 4_4:+80278082 | Msa0707040:CDS |
| ATAGGCTCCAGTTCAGCTGT+GGG | 0.591935 | 4_4:-80278616 | None:intergenic |
| AAGATGTGGCTTGCAAATGA+TGG | 0.599672 | 4_4:+80274032 | Msa0707040:CDS |
| CTATATGGTACATCTACTGA+AGG | 0.601918 | 4_4:-80275762 | None:intergenic |
| TAATGCAAGCTCAGCATGAG+GGG | 0.602155 | 4_4:-80275112 | None:intergenic |
| TGGTGTCGAGTTCTAAGAAG+TGG | 0.603974 | 4_4:-80273765 | None:intergenic |
| TAATCCCATAACCAGCAACC+AGG | 0.604169 | 4_4:-80276256 | None:intergenic |
| AGATGGATGTTCCAGTGTTG+TGG | 0.609611 | 4_4:+80275496 | Msa0707040:intron |
| TGTCTGCTCCACCAGAAAGA+GGG | 0.609748 | 4_4:-80276312 | None:intergenic |
| TTTAATGCAAGCTCAGCATG+AGG | 0.609788 | 4_4:-80275114 | None:intergenic |
| GGAGCTCCAACGTGGATGAA+GGG | 0.610939 | 4_4:+80278174 | Msa0707040:CDS |
| AAAATATCACTCTCCTGAGG+AGG | 0.616399 | 4_4:+80276219 | Msa0707040:CDS |
| TTATGATACGACCCAAGATG+TGG | 0.618671 | 4_4:+80274018 | Msa0707040:CDS |
| TCAGCGGATATAAATCCCAT+TGG | 0.619764 | 4_4:+80278502 | Msa0707040:CDS |
| GAGGAAATAGCATTTGGACC+TGG | 0.620903 | 4_4:+80276238 | Msa0707040:CDS |
| TGTTGGATGCATGTGCCAGA+TGG | 0.622175 | 4_4:+80276354 | Msa0707040:CDS |
| TTGAAGTGGAAATTGCGAGA+GGG | 0.624594 | 4_4:-80273539 | None:intergenic |
| TAACCTTAAGAGGAACAGAA+AGG | 0.625303 | 4_4:-80275815 | None:intergenic |
| ATCAGCAAACCATGAGTCAG+TGG | 0.626159 | 4_4:+80280589 | Msa0707040:CDS |
| GGTTCAGGCAATCCAAATGT+CGG | 0.627370 | 4_4:+80280656 | Msa0707040:CDS |
| TTAATGCAAGCTCAGCATGA+GGG | 0.627773 | 4_4:-80275113 | None:intergenic |
| AATCACCAAGGCTGTGATGG+TGG | 0.627776 | 4_4:+80275255 | Msa0707040:CDS |
| ACGCAACCCTTCATCCACGT+TGG | 0.629155 | 4_4:-80278180 | None:intergenic |
| AAAATTGACTCCATCACAAG+TGG | 0.630195 | 4_4:+80280214 | Msa0707040:CDS |
| GAAGTGTTTATGAATGCAAG+CGG | 0.632138 | 4_4:+80275144 | Msa0707040:CDS |
| ATAGGTGCTACTCATACTCG+TGG | 0.632910 | 4_4:+80275213 | Msa0707040:CDS |
| CATTCTTAGAGCTATTGCAG+TGG | 0.633093 | 4_4:+80275059 | Msa0707040:intron |
| TGCTGAGCTTGCATTAAATG+GGG | 0.634241 | 4_4:+80275119 | Msa0707040:CDS |
| CTTGCAGAGTTATTCACCAG+AGG | 0.641776 | 4_4:+80280460 | Msa0707040:intron |
| AACGTGGATGAAGGGTTGCG+TGG | 0.643125 | 4_4:+80278182 | Msa0707040:CDS |
| CCAAAGATGAGTAACCAAGA+TGG | 0.644012 | 4_4:-80278573 | None:intergenic |
| GGACCCGAACTCGAAATCCC+CGG | 0.648427 | 4_4:+80273727 | Msa0707040:CDS |
| GACACCTTCCTATCATGCCG+AGG | 0.650724 | 4_4:+80280298 | Msa0707040:CDS |
| CAGAATCTATGTTACAGATG+GGG | 0.651806 | 4_4:+80280188 | Msa0707040:intron |
| AATTCAGTCACCTTGTAGCG+TGG | 0.653429 | 4_4:-80277523 | None:intergenic |
| GTTGAAGTGGAAATTGCGAG+AGG | 0.654805 | 4_4:-80273540 | None:intergenic |
| AGTGGAAATTGCGAGAGGGT+CGG | 0.660633 | 4_4:-80273535 | None:intergenic |
| TGTCTTGGGGAGCTCCAACG+TGG | 0.667789 | 4_4:+80278166 | Msa0707040:CDS |
| CCCAATGCCTCAGAAACATG+AGG | 0.670620 | 4_4:-80274125 | None:intergenic |
| AATGCAAGCTCAGCATGAGG+GGG | 0.672892 | 4_4:-80275111 | None:intergenic |
| GGCATGATAGGAAGGTGTCA+AGG | 0.674042 | 4_4:-80280294 | None:intergenic |
| GATAAAATATCACTCTCCTG+AGG | 0.674234 | 4_4:+80276216 | Msa0707040:intron |
| CATTCATAATAATCACGATG+AGG | 0.676220 | 4_4:+80273587 | Msa0707040:exon |
| ATGTGCCAGATGGTCGTGAA+AGG | 0.676922 | 4_4:+80276364 | Msa0707040:CDS |
| GTTGCAGTTCGGAAATGACA+AGG | 0.688965 | 4_4:+80277389 | Msa0707040:intron |
| ACATGGAAACTGGACCACAA+CGG | 0.692287 | 4_4:-80279178 | None:intergenic |
| CCCAAGACAAGATAAAACCC+AGG | 0.699587 | 4_4:-80278152 | None:intergenic |
| ACAGTATGATTGCAGCTCAG+CGG | 0.700171 | 4_4:+80278486 | Msa0707040:intron |
| TCCAACAATCGCAGCAACAG+AGG | 0.708792 | 4_4:-80276338 | None:intergenic |
| AATGCCTCAGAAACATGAGG+AGG | 0.716948 | 4_4:-80274122 | None:intergenic |
| GGTGCTACTCATACTCGTGG+AGG | 0.717392 | 4_4:+80275216 | Msa0707040:CDS |
| ATGATAGGAAGGTGTCAAGG+TGG | 0.717838 | 4_4:-80280291 | None:intergenic |
| TGCTCAGATAGATCTTGACG+TGG | 0.724663 | 4_4:+80275580 | Msa0707040:CDS |
| GTTGCGTGGCTACTTGACGA+AGG | 0.727374 | 4_4:+80278196 | Msa0707040:CDS |
| TATATGTACAGTAATCACCA+AGG | 0.733738 | 4_4:+80275243 | Msa0707040:CDS |
| GGTCTTCACAGCCATAACCG+GGG | 0.753301 | 4_4:-80273744 | None:intergenic |
| TGATATGGGAATGACTTACG+AGG | 0.757080 | 4_4:+80279121 | Msa0707040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATTTTTCATATTAAAA+TGG | + | chr4_4:80279272-80279291 | Msa0707040:intron | 10.0% |
| !! | AAATTAAAAAAAAAAAGGTT+AGG | - | chr4_4:80280161-80280180 | None:intergenic | 10.0% |
| !!! | TACTTTATTTTGTTTTATTA+GGG | - | chr4_4:80280703-80280722 | None:intergenic | 10.0% |
| !!! | TTACTTTATTTTGTTTTATT+AGG | - | chr4_4:80280704-80280723 | None:intergenic | 10.0% |
| !!! | TTGTTATAGAAATTTTGTAT+TGG | - | chr4_4:80274532-80274551 | None:intergenic | 15.0% |
| !! | TTTCTATTATTATTGTTTGA+CGG | + | chr4_4:80274778-80274797 | Msa0707040:intron | 15.0% |
| !! | TGTTTAAATGTCAATTATAT+AGG | + | chr4_4:80275424-80275443 | Msa0707040:intron | 15.0% |
| !! | AACATCATTTAAAGAAAATT+GGG | - | chr4_4:80275549-80275568 | None:intergenic | 15.0% |
| !!! | CATATAAAGATTAAAACTTT+TGG | - | chr4_4:80275970-80275989 | None:intergenic | 15.0% |
| !! | ATTATTGTGTATACTATTAT+AGG | + | chr4_4:80276478-80276497 | Msa0707040:intron | 15.0% |
| !! | TTGGATTGAAAAAATATTAA+CGG | - | chr4_4:80277151-80277170 | None:intergenic | 15.0% |
| !! | ATGTTGATATTAATGAAAAA+TGG | + | chr4_4:80277640-80277659 | Msa0707040:intron | 15.0% |
| !!! | TTTATTTTCACTTTGTTTTT+TGG | + | chr4_4:80278305-80278324 | Msa0707040:intron | 15.0% |
| !! | GATCAAAAATATATTACTAA+TGG | - | chr4_4:80279042-80279061 | None:intergenic | 15.0% |
| !! | ATGGCAAATTAAAAAAAAAA+AGG | - | chr4_4:80280166-80280185 | None:intergenic | 15.0% |
| !!! | ACTTTATTTTGTTTTATTAG+GGG | - | chr4_4:80280702-80280721 | None:intergenic | 15.0% |
| !! | TGTTTGAAAGAAATATTGAT+TGG | + | chr4_4:80273897-80273916 | Msa0707040:CDS | 20.0% |
| !! | TTAAACTAAAAAAGTTAGTG+CGG | - | chr4_4:80274421-80274440 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTACATTATGTCA+TGG | - | chr4_4:80274642-80274661 | None:intergenic | 20.0% |
| !! | TGACATAATGTAAAAAGAAA+TGG | + | chr4_4:80274642-80274661 | Msa0707040:intron | 20.0% |
| !!! | ATGTGTTTCATTTATGTTTT+TGG | + | chr4_4:80274978-80274997 | Msa0707040:intron | 20.0% |
| !!! | TGTGTTTCATTTATGTTTTT+GGG | + | chr4_4:80274979-80274998 | Msa0707040:intron | 20.0% |
| !! | GGAAAATAAATATCCTTATA+CGG | - | chr4_4:80275396-80275415 | None:intergenic | 20.0% |
| !! | TGACATTTAAACAATCTAAA+TGG | - | chr4_4:80275417-80275436 | None:intergenic | 20.0% |
| !! | CAACATCATTTAAAGAAAAT+TGG | - | chr4_4:80275550-80275569 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAAATGATGTTG+AGG | + | chr4_4:80275550-80275569 | Msa0707040:CDS | 20.0% |
| !!! | ATTTTGACCATAAACATTAA+AGG | + | chr4_4:80275645-80275664 | Msa0707040:intron | 20.0% |
| !! | TGTAAATCCTTTAATGTTTA+TGG | - | chr4_4:80275655-80275674 | None:intergenic | 20.0% |
| !! | AATTGTAAATGAAAGAGAAA+AGG | - | chr4_4:80276778-80276797 | None:intergenic | 20.0% |
| !!! | AGTATTTTATACTGTGTTTA+TGG | + | chr4_4:80276999-80277018 | Msa0707040:CDS | 20.0% |
| !!! | GTATTTTATACTGTGTTTAT+GGG | + | chr4_4:80277000-80277019 | Msa0707040:CDS | 20.0% |
| !!! | ATATGTTATTTGAAATCAAC+TGG | + | chr4_4:80277321-80277340 | Msa0707040:intron | 20.0% |
| !! | ATGTTAAAAGAAATACTGAA+GGG | + | chr4_4:80277793-80277812 | Msa0707040:intron | 20.0% |
| !! | CATACAAAAAATATCATTTG+AGG | - | chr4_4:80278006-80278025 | None:intergenic | 20.0% |
| !!! | TTGTATGATTTTGTTTATAC+AGG | + | chr4_4:80278019-80278038 | Msa0707040:intron | 20.0% |
| !!! | TTAGATTACACGTTTTTATA+GGG | + | chr4_4:80278234-80278253 | Msa0707040:intron | 20.0% |
| !!! | ACATAAATTTTGTCTTCAAA+TGG | + | chr4_4:80278404-80278423 | Msa0707040:intron | 20.0% |
| !! | AACTAATAGATACTGTTAAA+GGG | - | chr4_4:80278953-80278972 | None:intergenic | 20.0% |
| !! | AAACTAATAGATACTGTTAA+AGG | - | chr4_4:80278954-80278973 | None:intergenic | 20.0% |
| !!! | TAACAGTATCTATTAGTTTT+TGG | + | chr4_4:80278955-80278974 | Msa0707040:intron | 20.0% |
| !! | CAAAAAAATAAAAAATACCC+AGG | - | chr4_4:80279016-80279035 | None:intergenic | 20.0% |
| !! | TTTCATATTAAAATGGTTGA+AGG | + | chr4_4:80279279-80279298 | Msa0707040:intron | 20.0% |
| !!! | TACTGATATTGAACTTATTT+TGG | - | chr4_4:80279497-80279516 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTCAAAAAAGC+AGG | - | chr4_4:80279838-80279857 | None:intergenic | 20.0% |
| !!! | TGCTTTTTTGAAAATAAAAG+AGG | + | chr4_4:80279837-80279856 | Msa0707040:intron | 20.0% |
| !!! | AGTTAGCATTTTTTTTCTTT+AGG | + | chr4_4:80279915-80279934 | Msa0707040:intron | 20.0% |
| !! | TCAAGTATTATTCGATAAAT+CGG | + | chr4_4:80280258-80280277 | Msa0707040:CDS | 20.0% |
| !! | ATCTTGCATTATAAAGAAAT+TGG | - | chr4_4:80280505-80280524 | None:intergenic | 20.0% |
| !! | AATTTCTTTATAATGCAAGA+TGG | + | chr4_4:80280504-80280523 | Msa0707040:CDS | 20.0% |
| !! | TGGAATCTATATATTTGTTT+GGG | - | chr4_4:80280762-80280781 | None:intergenic | 20.0% |
| !! | ATGGAATCTATATATTTGTT+TGG | - | chr4_4:80280763-80280782 | None:intergenic | 20.0% |
| !! | GTCTTATGCTAAAAAATTTA+TGG | + | chr4_4:80280976-80280995 | Msa0707040:three_prime_UTR | 20.0% |
| !! | AAGAAATATTGATTGGTGAT+TGG | + | chr4_4:80273904-80273923 | Msa0707040:CDS | 25.0% |
| ! | TTAACAAAACCATAACCAAA+TGG | - | chr4_4:80274164-80274183 | None:intergenic | 25.0% |
| ! | ACAAAAATAACGTGTGAATA+TGG | - | chr4_4:80274206-80274225 | None:intergenic | 25.0% |
| ! | GTAATTTCTCAAATCATTAC+TGG | - | chr4_4:80274303-80274322 | None:intergenic | 25.0% |
| ! | TTTCTATAACAAGTGTCATA+AGG | + | chr4_4:80274540-80274559 | Msa0707040:intron | 25.0% |
| ! | TTCTATAACAAGTGTCATAA+GGG | + | chr4_4:80274541-80274560 | Msa0707040:intron | 25.0% |
| !!! | TTGTGTCATATTTTAACCTA+GGG | - | chr4_4:80274582-80274601 | None:intergenic | 25.0% |
| !!! | ATTGTGTCATATTTTAACCT+AGG | - | chr4_4:80274583-80274602 | None:intergenic | 25.0% |
| !!! | GTGTTTCATTTATGTTTTTG+GGG | + | chr4_4:80274980-80274999 | Msa0707040:intron | 25.0% |
| ! | ATAAACATCTGAGTATAAGT+TGG | - | chr4_4:80275010-80275029 | None:intergenic | 25.0% |
| !! | ATATTTTCCTACCATAGTAA+AGG | - | chr4_4:80275284-80275303 | None:intergenic | 25.0% |
| ! | TAAATGTGAAAAAAGACGAA+CGG | - | chr4_4:80275323-80275342 | None:intergenic | 25.0% |
| ! | TTTAATATCCATTGTGTGTT+TGG | + | chr4_4:80275339-80275358 | Msa0707040:intron | 25.0% |
| ! | TTAATATCCATTGTGTGTTT+GGG | + | chr4_4:80275340-80275359 | Msa0707040:intron | 25.0% |
| ! | TTCATTTCATTTGTAACAGA+TGG | + | chr4_4:80275479-80275498 | Msa0707040:intron | 25.0% |
| ! | TTAAAGGATTTACATCAGAT+TGG | + | chr4_4:80275661-80275680 | Msa0707040:intron | 25.0% |
| !! | CTAAACATTATGAGCTTTAA+AGG | + | chr4_4:80275873-80275892 | Msa0707040:intron | 25.0% |
| !!! | AATACTCTTTTAAGGGAATA+CGG | - | chr4_4:80275924-80275943 | None:intergenic | 25.0% |
| !!! | TATTCCCTTAAAAGAGTATT+TGG | + | chr4_4:80275924-80275943 | Msa0707040:intron | 25.0% |
| ! | TTTGGTGAAAAATAAAACCT+TGG | - | chr4_4:80275952-80275971 | None:intergenic | 25.0% |
| ! | AATCTTTATATGTGCTTGTT+TGG | + | chr4_4:80275978-80275997 | Msa0707040:intron | 25.0% |
| ! | AAAATTTAGAAGCTGCTATT+TGG | + | chr4_4:80276058-80276077 | Msa0707040:intron | 25.0% |
| ! | GAAAGGAAATATAAACATTC+AGG | - | chr4_4:80276621-80276640 | None:intergenic | 25.0% |
| !! | TCATTTACAATTTTTGAACG+TGG | + | chr4_4:80276786-80276805 | Msa0707040:intron | 25.0% |
| ! | TTAATGATATCCAAACTACA+AGG | - | chr4_4:80276855-80276874 | None:intergenic | 25.0% |
| !! | CACAGTATAAAATACTCTTT+TGG | - | chr4_4:80276995-80277014 | None:intergenic | 25.0% |
| !! | TTCTAGTGTTTTACAATCAT+TGG | + | chr4_4:80277054-80277073 | Msa0707040:intron | 25.0% |
| !!! | TATCATTGATGAAGTATTGA+AGG | - | chr4_4:80277114-80277133 | None:intergenic | 25.0% |
| !!! | TTCAATCCAATGTGTTTTAA+TGG | + | chr4_4:80277161-80277180 | Msa0707040:intron | 25.0% |
| !!! | TCAATCCAATGTGTTTTAAT+GGG | + | chr4_4:80277162-80277181 | Msa0707040:intron | 25.0% |
| ! | CAAAATAAAAGGATTTCTTC+AGG | - | chr4_4:80277264-80277283 | None:intergenic | 25.0% |
| ! | AAACTGATCGACAAAATAAA+AGG | - | chr4_4:80277275-80277294 | None:intergenic | 25.0% |
| !! | TGTTTGAAACAAAGACAAAA+GGG | - | chr4_4:80277488-80277507 | None:intergenic | 25.0% |
| ! | TCATTAATATCAACATACTC+CGG | - | chr4_4:80277636-80277655 | None:intergenic | 25.0% |
| ! | GATGTTAAAAGAAATACTGA+AGG | + | chr4_4:80277792-80277811 | Msa0707040:intron | 25.0% |
| ! | AACACAAAGGAAAATACAAT+AGG | - | chr4_4:80277845-80277864 | None:intergenic | 25.0% |
| !!! | CTGTTATTTCATAAACACAA+AGG | - | chr4_4:80277858-80277877 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTATACAGGTAGA+TGG | + | chr4_4:80278026-80278045 | Msa0707040:intron | 25.0% |
| !! | GTTAGATTACACGTTTTTAT+AGG | + | chr4_4:80278233-80278252 | Msa0707040:intron | 25.0% |
| !! | TAGATTACACGTTTTTATAG+GGG | + | chr4_4:80278235-80278254 | Msa0707040:intron | 25.0% |
| !! | GAAGTCAAGACATTTTTAAA+AGG | - | chr4_4:80278846-80278865 | None:intergenic | 25.0% |
| ! | ACAAAAACGACAAAAATCAA+GGG | - | chr4_4:80279256-80279275 | None:intergenic | 25.0% |
| ! | TACAAAAACGACAAAAATCA+AGG | - | chr4_4:80279257-80279276 | None:intergenic | 25.0% |
| ! | TCACAATATCAATCTTTGTT+AGG | + | chr4_4:80279340-80279359 | Msa0707040:intron | 25.0% |
| !!! | TATTGACTCATTTTTTCTGT+TGG | + | chr4_4:80279520-80279539 | Msa0707040:intron | 25.0% |
| ! | TGATTAACAAAAGACACATT+TGG | - | chr4_4:80279637-80279656 | None:intergenic | 25.0% |
| !! | GTGTCTTTTGTTAATCATTT+TGG | + | chr4_4:80279640-80279659 | Msa0707040:intron | 25.0% |
| ! | ATGTCTTACGTTAATCAATT+TGG | + | chr4_4:80279672-80279691 | Msa0707040:intron | 25.0% |
| !! | CTCTTTTGCTAGTAATATTA+TGG | - | chr4_4:80279699-80279718 | None:intergenic | 25.0% |
| ! | TTCAATATATAGACAAGATC+TGG | - | chr4_4:80279778-80279797 | None:intergenic | 25.0% |
| ! | TTGTCTATATATTGAACAGA+CGG | + | chr4_4:80279782-80279801 | Msa0707040:intron | 25.0% |
| ! | AAGGCTATTTATCTGAAAAA+TGG | + | chr4_4:80279887-80279906 | Msa0707040:intron | 25.0% |
| ! | AAATCAATCTAATGTGACTT+AGG | - | chr4_4:80280018-80280037 | None:intergenic | 25.0% |
| !! | AGTTCTTATGATTTAAAGTC+AGG | + | chr4_4:80280326-80280345 | Msa0707040:intron | 25.0% |
| !! | GTTCTTATGATTTAAAGTCA+GGG | + | chr4_4:80280327-80280346 | Msa0707040:intron | 25.0% |
| !!! | TTATTTTGTTTTATTAGGGG+AGG | - | chr4_4:80280699-80280718 | None:intergenic | 25.0% |
| ! | CATAGTGTGCTATAAAAATA+TGG | - | chr4_4:80280782-80280801 | None:intergenic | 25.0% |
| !!! | AATGTTTTTACACTACACAT+GGG | - | chr4_4:80280828-80280847 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTACACTACACA+TGG | - | chr4_4:80280829-80280848 | None:intergenic | 25.0% |
| ! | TGCTAAAAAATTTATGGTGA+AGG | + | chr4_4:80280982-80281001 | Msa0707040:three_prime_UTR | 25.0% |
| CATTCATAATAATCACGATG+AGG | + | chr4_4:80273587-80273606 | Msa0707040:exon | 30.0% | |
| GAGTTATTACGAATGGTTAA+TGG | - | chr4_4:80273788-80273807 | None:intergenic | 30.0% | |
| AAAGAGAGAGTTATTACGAA+TGG | - | chr4_4:80273795-80273814 | None:intergenic | 30.0% | |
| ! | TCAGTTTTTGTCACTGAAAT+TGG | + | chr4_4:80273853-80273872 | Msa0707040:intron | 30.0% |
| GATAACATAGTGTGTAGTAT+TGG | + | chr4_4:80273930-80273949 | Msa0707040:CDS | 30.0% | |
| ATTGGAATGCCTATTATCAA+AGG | + | chr4_4:80273948-80273967 | Msa0707040:CDS | 30.0% | |
| GAAGTTGAAAATCATCAAGT+TGG | - | chr4_4:80274103-80274122 | None:intergenic | 30.0% | |
| AAATCAGTTCCATTTGGTTA+TGG | + | chr4_4:80274152-80274171 | Msa0707040:CDS | 30.0% | |
| TTACAAGTGTCAATGTCATT+TGG | + | chr4_4:80274319-80274338 | Msa0707040:intron | 30.0% | |
| TTGAAGGAAAATTTGAGCAT+CGG | - | chr4_4:80274348-80274367 | None:intergenic | 30.0% | |
| ! | ATGCTCAAATTTTCCTTCAA+CGG | + | chr4_4:80274348-80274367 | Msa0707040:intron | 30.0% |
| ! | TAGTTTAAGAGCACATGTTA+AGG | + | chr4_4:80274433-80274452 | Msa0707040:intron | 30.0% |
| TGTAAAAAGAAATGGTACAC+TGG | + | chr4_4:80274650-80274669 | Msa0707040:intron | 30.0% | |
| !!! | GTATTTTGTTTTGCTATCTC+TGG | - | chr4_4:80274688-80274707 | None:intergenic | 30.0% |
| ATAATAGAAAAAGAGAGCCA+GGG | - | chr4_4:80274768-80274787 | None:intergenic | 30.0% | |
| AATAATAGAAAAAGAGAGCC+AGG | - | chr4_4:80274769-80274788 | None:intergenic | 30.0% | |
| ATAGTTTGAACACACTACTT+AGG | - | chr4_4:80274949-80274968 | None:intergenic | 30.0% | |
| TATATGTACAGTAATCACCA+AGG | + | chr4_4:80275243-80275262 | Msa0707040:CDS | 30.0% | |
| TTTAAATGATGTTGAGGTTG+TGG | + | chr4_4:80275556-80275575 | Msa0707040:CDS | 30.0% | |
| GCATTGCAAGCATTTAAATA+TGG | - | chr4_4:80275619-80275638 | None:intergenic | 30.0% | |
| AAAGGAAGACAAAGACTATA+TGG | - | chr4_4:80275780-80275799 | None:intergenic | 30.0% | |
| GACAATAAACTAACCTTAAG+AGG | - | chr4_4:80275828-80275847 | None:intergenic | 30.0% | |
| ! | TTTTCACAATTTCACTGCTT+TGG | - | chr4_4:80276042-80276061 | None:intergenic | 30.0% |
| ! | AAATCAATAAAGTGCTTGTG+TGG | - | chr4_4:80276128-80276147 | None:intergenic | 30.0% |
| TGTTACTGCTGAAATTAATC+AGG | + | chr4_4:80276153-80276172 | Msa0707040:intron | 30.0% | |
| CATGTTTCAACTTAGTAACT+TGG | - | chr4_4:80276182-80276201 | None:intergenic | 30.0% | |
| !! | CTTCTTTGAGATCTTTATAG+TGG | - | chr4_4:80276540-80276559 | None:intergenic | 30.0% |
| ! | CTCAAAGAAGATTAGTTAAG+AGG | + | chr4_4:80276550-80276569 | Msa0707040:intron | 30.0% |
| !! | TTTTGCAAGACTTTTGAGAA+AGG | - | chr4_4:80276638-80276657 | None:intergenic | 30.0% |
| TTTCTGTAAGAAGTAAAGCA+CGG | - | chr4_4:80276700-80276719 | None:intergenic | 30.0% | |
| AAAACTGAGTTGTGTAATCA+TGG | + | chr4_4:80276718-80276737 | Msa0707040:intron | 30.0% | |
| TAAATGAAAGAGAAAAGGAG+AGG | - | chr4_4:80276773-80276792 | None:intergenic | 30.0% | |
| TTTCCTTCAGAAATTGCAAA+TGG | + | chr4_4:80276889-80276908 | Msa0707040:intron | 30.0% | |
| TTCCTTCAGAAATTGCAAAT+GGG | + | chr4_4:80276890-80276909 | Msa0707040:intron | 30.0% | |
| AAGTTAAAGCTGATGCAATA+CGG | + | chr4_4:80276920-80276939 | Msa0707040:CDS | 30.0% | |
| GTCTATCTAAGTTTCCATAT+CGG | + | chr4_4:80277081-80277100 | Msa0707040:intron | 30.0% | |
| !!! | CAATCCAATGTGTTTTAATG+GGG | + | chr4_4:80277163-80277182 | Msa0707040:intron | 30.0% |
| AAAACCCTCTTTAGATGTTA+TGG | + | chr4_4:80277348-80277367 | Msa0707040:intron | 30.0% | |
| ! | GTGTTTGAAACAAAGACAAA+AGG | - | chr4_4:80277489-80277508 | None:intergenic | 30.0% |
| ! | GTCTTTGTTTCAAACACTTA+CGG | + | chr4_4:80277492-80277511 | Msa0707040:CDS | 30.0% |
| ! | TCTTTGTTTCAAACACTTAC+GGG | + | chr4_4:80277493-80277512 | Msa0707040:CDS | 30.0% |
| ! | ATCAAATATCCACAGACTTT+TGG | - | chr4_4:80277775-80277794 | None:intergenic | 30.0% |
| AGAAGAAAACAGAGCAATAA+TGG | - | chr4_4:80277891-80277910 | None:intergenic | 30.0% | |
| ACATGAACTTAATCTTAGTC+CGG | - | chr4_4:80277949-80277968 | None:intergenic | 30.0% | |
| GACCTATAGTTGAACTTATA+GGG | + | chr4_4:80278257-80278276 | Msa0707040:intron | 30.0% | |
| TACCCTATAAGTTCAACTAT+AGG | - | chr4_4:80278262-80278281 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTGGCTGAATCTA+TGG | + | chr4_4:80278317-80278336 | Msa0707040:intron | 30.0% |
| CACAATAATGAGAAACTAAG+TGG | - | chr4_4:80278430-80278449 | None:intergenic | 30.0% | |
| CACTTAGTTTCTCATTATTG+TGG | + | chr4_4:80278428-80278447 | Msa0707040:intron | 30.0% | |
| !! | TTTTCTGGCAATCTGTTATA+AGG | + | chr4_4:80278880-80278899 | Msa0707040:intron | 30.0% |
| ! | TTTCTGGCAATCTGTTATAA+GGG | + | chr4_4:80278881-80278900 | Msa0707040:intron | 30.0% |
| !! | TTGTGTATTTGACTTTTCAG+TGG | + | chr4_4:80278981-80279000 | Msa0707040:intron | 30.0% |
| AAAGAAGTCAATAGATAGGA+TGG | - | chr4_4:80279226-80279245 | None:intergenic | 30.0% | |
| GGTTAAAGAAGTCAATAGAT+AGG | - | chr4_4:80279230-80279249 | None:intergenic | 30.0% | |
| CAAAGATTGATATTGTGAGA+TGG | - | chr4_4:80279338-80279357 | None:intergenic | 30.0% | |
| !!! | AAATTGGTTTTATTGTTCGC+TGG | + | chr4_4:80279461-80279480 | Msa0707040:intron | 30.0% |
| ATTAACGTAAGACATATTCG+AGG | - | chr4_4:80279667-80279686 | None:intergenic | 30.0% | |
| CTGTAGAAGCTTGTAATTTA+AGG | + | chr4_4:80280114-80280133 | Msa0707040:intron | 30.0% | |
| TCAGAATCTATGTTACAGAT+GGG | + | chr4_4:80280187-80280206 | Msa0707040:intron | 30.0% | |
| ATCATAAGAACTACATACCT+CGG | - | chr4_4:80280318-80280337 | None:intergenic | 30.0% | |
| ! | TCGATTTTCCGAAATTGATA+CGG | - | chr4_4:80280530-80280549 | None:intergenic | 30.0% |
| TTCAATTAGATTCCGACATT+TGG | - | chr4_4:80280671-80280690 | None:intergenic | 30.0% | |
| CTATAACAAACTGAACTTGT+TGG | + | chr4_4:80280940-80280959 | Msa0707040:three_prime_UTR | 30.0% | |
| TCTACGAAGTTACTCAATCT+AGG | - | chr4_4:80273492-80273511 | None:intergenic | 35.0% | |
| TACTTGCAATCTCAACCAAT+GGG | + | chr4_4:80273624-80273643 | Msa0707040:CDS | 35.0% | |
| !! | GTCTTTGATTTGGAGAAGAT+TGG | - | chr4_4:80273665-80273684 | None:intergenic | 35.0% |
| AACCTGACAATTGTATCTCT+CGG | - | chr4_4:80273976-80273995 | None:intergenic | 35.0% | |
| GTAATTACAGAGAACTTCGA+TGG | + | chr4_4:80274054-80274073 | Msa0707040:CDS | 35.0% | |
| GTTTACTGCTTGGAAACAAA+GGG | + | chr4_4:80274076-80274095 | Msa0707040:CDS | 35.0% | |
| GGACAAAAATCAGTTCCATT+TGG | + | chr4_4:80274146-80274165 | Msa0707040:CDS | 35.0% | |
| !! | TGTTGGTGATATGTAGTGTT+TGG | + | chr4_4:80274374-80274393 | Msa0707040:intron | 35.0% |
| !! | GTTGGTGATATGTAGTGTTT+GGG | + | chr4_4:80274375-80274394 | Msa0707040:intron | 35.0% |
| ! | GGCTGAGTTGAATTATTTGT+TGG | + | chr4_4:80274821-80274840 | Msa0707040:intron | 35.0% |
| TTAGAATGCATGAGCGTAAA+AGG | - | chr4_4:80274856-80274875 | None:intergenic | 35.0% | |
| !! | ACTGCAATAGCTCTAAGAAT+GGG | - | chr4_4:80275060-80275079 | None:intergenic | 35.0% |
| ATGCTGAGCTTGCATTAAAT+GGG | + | chr4_4:80275118-80275137 | Msa0707040:CDS | 35.0% | |
| ! | GAAGTGTTTATGAATGCAAG+CGG | + | chr4_4:80275144-80275163 | Msa0707040:CDS | 35.0% |
| ! | CATCAAGCTTTCTAAGTTGA+TGG | - | chr4_4:80275176-80275195 | None:intergenic | 35.0% |
| ACATTCAGGAAATCCGTATA+AGG | + | chr4_4:80275380-80275399 | Msa0707040:intron | 35.0% | |
| AGCTACTTAAAGATCCTCTA+AGG | - | chr4_4:80275710-80275729 | None:intergenic | 35.0% | |
| CTATATGGTACATCTACTGA+AGG | - | chr4_4:80275765-80275784 | None:intergenic | 35.0% | |
| !!! | AGGCGTATTTTAAGGTCAAA+AGG | - | chr4_4:80275798-80275817 | None:intergenic | 35.0% |
| !! | GAACAGAAAGGCGTATTTTA+AGG | - | chr4_4:80275806-80275825 | None:intergenic | 35.0% |
| TAACCTTAAGAGGAACAGAA+AGG | - | chr4_4:80275818-80275837 | None:intergenic | 35.0% | |
| TTAAGGGAATACGGTATTCA+TGG | - | chr4_4:80275915-80275934 | None:intergenic | 35.0% | |
| ! | GGAGCCAAATACTCTTTTAA+GGG | - | chr4_4:80275931-80275950 | None:intergenic | 35.0% |
| ! | TGGAGCCAAATACTCTTTTA+AGG | - | chr4_4:80275932-80275951 | None:intergenic | 35.0% |
| !! | TAAAAGAGTATTTGGCTCCA+AGG | + | chr4_4:80275932-80275951 | Msa0707040:intron | 35.0% |
| AAATGTGCGACAAAAAGTCA+CGG | - | chr4_4:80276097-80276116 | None:intergenic | 35.0% | |
| GTTTCAACTTAGTAACTTGG+AGG | - | chr4_4:80276179-80276198 | None:intergenic | 35.0% | |
| GATAAAATATCACTCTCCTG+AGG | + | chr4_4:80276216-80276235 | Msa0707040:intron | 35.0% | |
| TGGGATTATTTACGAAGAAG+TGG | + | chr4_4:80276271-80276290 | Msa0707040:CDS | 35.0% | |
| AATGACAACTGCAGTTAGAT+TGG | + | chr4_4:80276400-80276419 | Msa0707040:intron | 35.0% | |
| TCTCCAATTAATTCAGCTGT+CGG | - | chr4_4:80276592-80276611 | None:intergenic | 35.0% | |
| GATATCCAAACTACAAGGTT+CGG | - | chr4_4:80276850-80276869 | None:intergenic | 35.0% | |
| TCCTTCAGAAATTGCAAATG+GGG | + | chr4_4:80276891-80276910 | Msa0707040:intron | 35.0% | |
| ! | CGGATTGGAAACTATATAGA+TGG | + | chr4_4:80276940-80276959 | Msa0707040:CDS | 35.0% |
| TGTTTATGGGATCTGAAAAC+AGG | + | chr4_4:80277013-80277032 | Msa0707040:CDS | 35.0% | |
| TTGAAGGAATATAGCCGATA+TGG | - | chr4_4:80277098-80277117 | None:intergenic | 35.0% | |
| TCAACCCCATTAAAACACAT+TGG | - | chr4_4:80277170-80277189 | None:intergenic | 35.0% | |
| TGCACCATAACATCTAAAGA+GGG | - | chr4_4:80277355-80277374 | None:intergenic | 35.0% | |
| TTAATATCAACATACTCCGG+TGG | - | chr4_4:80277633-80277652 | None:intergenic | 35.0% | |
| !!! | TATCCACAGACTTTTGGTTT+GGG | - | chr4_4:80277769-80277788 | None:intergenic | 35.0% |
| !! | ATATCCACAGACTTTTGGTT+TGG | - | chr4_4:80277770-80277789 | None:intergenic | 35.0% |
| TTGTTTATACAGGTAGATGG+TGG | + | chr4_4:80278029-80278048 | Msa0707040:intron | 35.0% | |
| GGACCTATAGTTGAACTTAT+AGG | + | chr4_4:80278256-80278275 | Msa0707040:intron | 35.0% | |
| !! | GCGACATGTTTTGAACTTAT+AGG | - | chr4_4:80278285-80278304 | None:intergenic | 35.0% |
| TGCTTACTTATACTGCCAAT+GGG | - | chr4_4:80278520-80278539 | None:intergenic | 35.0% | |
| GTATAAGTAAGCAGGATCTT+CGG | + | chr4_4:80278527-80278546 | Msa0707040:CDS | 35.0% | |
| TGACTGTAGTTAGAACGTAT+AGG | - | chr4_4:80278637-80278656 | None:intergenic | 35.0% | |
| TATACGTTCTAACTACAGTC+AGG | + | chr4_4:80278636-80278655 | Msa0707040:CDS | 35.0% | |
| ! | TTACACTTTTCAGTACTCAC+CGG | + | chr4_4:80278674-80278693 | Msa0707040:intron | 35.0% |
| TCATTGAGATGTTTCAAGAC+CGG | - | chr4_4:80278696-80278715 | None:intergenic | 35.0% | |
| CCAACACATATGCAAATGAA+AGG | - | chr4_4:80278721-80278740 | None:intergenic | 35.0% | |
| CCTTTCATTTGCATATGTGT+TGG | + | chr4_4:80278718-80278737 | Msa0707040:intron | 35.0% | |
| ! | ATGTGTTGGCATACTGTATT+TGG | + | chr4_4:80278732-80278751 | Msa0707040:intron | 35.0% |
| ! | TGTGTTGGCATACTGTATTT+GGG | + | chr4_4:80278733-80278752 | Msa0707040:intron | 35.0% |
| GTCTATGCTACAATGTTAGA+TGG | + | chr4_4:80278767-80278786 | Msa0707040:intron | 35.0% | |
| ! | CTATCTATCCAGACATTTTC+TGG | + | chr4_4:80278865-80278884 | Msa0707040:intron | 35.0% |
| !! | TGTTATAAGGGTGATGGTTT+TGG | + | chr4_4:80278893-80278912 | Msa0707040:intron | 35.0% |
| !! | GTTATAAGGGTGATGGTTTT+GGG | + | chr4_4:80278894-80278913 | Msa0707040:intron | 35.0% |
| AAAAAATACCCAGGAGAACA+AGG | - | chr4_4:80279007-80279026 | None:intergenic | 35.0% | |
| !! | CAGCTTGATGAAGTTGATAT+GGG | + | chr4_4:80279107-80279126 | Msa0707040:intron | 35.0% |
| TACGAGGAACTATCTGTTTA+TGG | + | chr4_4:80279137-80279156 | Msa0707040:CDS | 35.0% | |
| AACGACAAAAATCAAGGGAA+AGG | - | chr4_4:80279251-80279270 | None:intergenic | 35.0% | |
| GCATCATTCTTCATTGTATC+TGG | - | chr4_4:80279366-80279385 | None:intergenic | 35.0% | |
| TTATAGGCTTATAGCCTATG+GGG | - | chr4_4:80279407-80279426 | None:intergenic | 35.0% | |
| GTTATAGGCTTATAGCCTAT+GGG | - | chr4_4:80279408-80279427 | None:intergenic | 35.0% | |
| AGTTATAGGCTTATAGCCTA+TGG | - | chr4_4:80279409-80279428 | None:intergenic | 35.0% | |
| CATGCAGGTAAGTTAGTTAT+AGG | - | chr4_4:80279423-80279442 | None:intergenic | 35.0% | |
| ATTTGACAGGTCGATGAAAT+TGG | + | chr4_4:80279445-80279464 | Msa0707040:intron | 35.0% | |
| TGGACGTATCAACATTACAA+AGG | + | chr4_4:80279607-80279626 | Msa0707040:intron | 35.0% | |
| TACTAGCAAAAGAGACACTT+AGG | + | chr4_4:80279705-80279724 | Msa0707040:intron | 35.0% | |
| ACTAGCAAAAGAGACACTTA+GGG | + | chr4_4:80279706-80279725 | Msa0707040:intron | 35.0% | |
| !! | GTGTTTTTACAGACAGTTGT+AGG | - | chr4_4:80279751-80279770 | None:intergenic | 35.0% |
| !! | AGCAGGTAAAGTTTTGTAAC+TGG | - | chr4_4:80279821-80279840 | None:intergenic | 35.0% |
| TTGCAATAAAAGCTCACACA+AGG | - | chr4_4:80279867-80279886 | None:intergenic | 35.0% | |
| ! | GTGTGAGCTTTTATTGCAAA+AGG | + | chr4_4:80279868-80279887 | Msa0707040:intron | 35.0% |
| CTAATGTGACTTAGGATACA+TGG | - | chr4_4:80280010-80280029 | None:intergenic | 35.0% | |
| ! | TGCCATGTTTTCAATCGATA+CGG | + | chr4_4:80280044-80280063 | Msa0707040:intron | 35.0% |
| GTTAGGACTGAACTTAAAGA+TGG | - | chr4_4:80280144-80280163 | None:intergenic | 35.0% | |
| ! | CTGTAACATAGATTCTGAGA+TGG | - | chr4_4:80280185-80280204 | None:intergenic | 35.0% |
| CTCAGAATCTATGTTACAGA+TGG | + | chr4_4:80280186-80280205 | Msa0707040:intron | 35.0% | |
| CAGAATCTATGTTACAGATG+GGG | + | chr4_4:80280188-80280207 | Msa0707040:intron | 35.0% | |
| ! | AAAATTGACTCCATCACAAG+TGG | + | chr4_4:80280214-80280233 | Msa0707040:CDS | 35.0% |
| ! | ATTCACGCTCCTAAAGATTT+TGG | + | chr4_4:80280368-80280387 | Msa0707040:intron | 35.0% |
| GTTATTCACCAGAGGATAAT+AGG | + | chr4_4:80280468-80280487 | Msa0707040:CDS | 35.0% | |
| AGATCAAACCTATTATCCTC+TGG | - | chr4_4:80280479-80280498 | None:intergenic | 35.0% | |
| AGATGACGATGCAATATGAA+AGG | + | chr4_4:80280895-80280914 | Msa0707040:three_prime_UTR | 35.0% | |
| TTGAAGTGGAAATTGCGAGA+GGG | - | chr4_4:80273542-80273561 | None:intergenic | 40.0% | |
| ! | GTCTCTGTTGTTTGTTGAAG+TGG | - | chr4_4:80273556-80273575 | None:intergenic | 40.0% |
| CTACTTGCAATCTCAACCAA+TGG | + | chr4_4:80273623-80273642 | Msa0707040:CDS | 40.0% | |
| AATCGAATTCCATAGCCCAT+TGG | - | chr4_4:80273642-80273661 | None:intergenic | 40.0% | |
| TGGAGATGGAGTCTTTGATT+TGG | - | chr4_4:80273675-80273694 | None:intergenic | 40.0% | |
| ATCTCCAAATCCAAACAAGC+CGG | + | chr4_4:80273688-80273707 | Msa0707040:CDS | 40.0% | |
| !!! | ATTGGTTTTGTTGCTGCAGA+TGG | + | chr4_4:80273871-80273890 | Msa0707040:intron | 40.0% |
| !!! | TTGGTTTTGTTGCTGCAGAT+GGG | + | chr4_4:80273872-80273891 | Msa0707040:intron | 40.0% |
| ! | CTCTCGGAACCTTTGATAAT+AGG | - | chr4_4:80273960-80273979 | None:intergenic | 40.0% |
| TTCCGAGAGATACAATTGTC+AGG | + | chr4_4:80273971-80273990 | Msa0707040:CDS | 40.0% | |
| TTATGATACGACCCAAGATG+TGG | + | chr4_4:80274018-80274037 | Msa0707040:CDS | 40.0% | |
| TCATTTGCAAGCCACATCTT+GGG | - | chr4_4:80274032-80274051 | None:intergenic | 40.0% | |
| ATCATTTGCAAGCCACATCT+TGG | - | chr4_4:80274033-80274052 | None:intergenic | 40.0% | |
| ! | AAGATGTGGCTTGCAAATGA+TGG | + | chr4_4:80274032-80274051 | Msa0707040:CDS | 40.0% |
| AACTTCGATGGTTTACTGCT+TGG | + | chr4_4:80274066-80274085 | Msa0707040:CDS | 40.0% | |
| GGTTTACTGCTTGGAAACAA+AGG | + | chr4_4:80274075-80274094 | Msa0707040:CDS | 40.0% | |
| CATTACTGGTGTCTACATGT+CGG | - | chr4_4:80274289-80274308 | None:intergenic | 40.0% | |
| !! | TTTTCCTTCAACGGAAGTGT+TGG | + | chr4_4:80274357-80274376 | Msa0707040:intron | 40.0% |
| !! | TAGTGTTTGGGTTGATGCAT+AGG | + | chr4_4:80274387-80274406 | Msa0707040:intron | 40.0% |
| GTACATGTTAGCATTTCCCT+AGG | + | chr4_4:80274563-80274582 | Msa0707040:intron | 40.0% | |
| ! | AGAAATGGTACACTGGTTGT+AGG | + | chr4_4:80274657-80274676 | Msa0707040:intron | 40.0% |
| GACGTAACATTAGTGTCTGA+TGG | - | chr4_4:80274737-80274756 | None:intergenic | 40.0% | |
| !! | CACTGCAATAGCTCTAAGAA+TGG | - | chr4_4:80275061-80275080 | None:intergenic | 40.0% |
| CATTCTTAGAGCTATTGCAG+TGG | + | chr4_4:80275059-80275078 | Msa0707040:intron | 40.0% | |
| TTAATGCAAGCTCAGCATGA+GGG | - | chr4_4:80275116-80275135 | None:intergenic | 40.0% | |
| TTTAATGCAAGCTCAGCATG+AGG | - | chr4_4:80275117-80275136 | None:intergenic | 40.0% | |
| CATGCTGAGCTTGCATTAAA+TGG | + | chr4_4:80275117-80275136 | Msa0707040:CDS | 40.0% | |
| TGCTGAGCTTGCATTAAATG+GGG | + | chr4_4:80275119-80275138 | Msa0707040:CDS | 40.0% | |
| ! | GTTCGTCTTCGTGCTTTTAT+AGG | + | chr4_4:80275195-80275214 | Msa0707040:CDS | 40.0% |
| GACGAACGGAATTCTGTTAA+GGG | - | chr4_4:80275309-80275328 | None:intergenic | 40.0% | |
| AGACGAACGGAATTCTGTTA+AGG | - | chr4_4:80275310-80275329 | None:intergenic | 40.0% | |
| ATATCCATTGTGTGTTTGGG+AGG | + | chr4_4:80275343-80275362 | Msa0707040:intron | 40.0% | |
| TATCCATTGTGTGTTTGGGA+GGG | + | chr4_4:80275344-80275363 | Msa0707040:intron | 40.0% | |
| GCGAGGTAAATTCAACATTC+AGG | + | chr4_4:80275366-80275385 | Msa0707040:intron | 40.0% | |
| TGTTCCAGTGTTGTGGTTAA+TGG | + | chr4_4:80275503-80275522 | Msa0707040:CDS | 40.0% | |
| ATCACCATTAACCACAACAC+TGG | - | chr4_4:80275510-80275529 | None:intergenic | 40.0% | |
| ! | AATGGTGATGTTGTTGCTCA+AGG | + | chr4_4:80275521-80275540 | Msa0707040:CDS | 40.0% |
| ! | CATCAGATTGGTTCCTTTAC+TGG | + | chr4_4:80275673-80275692 | Msa0707040:intron | 40.0% |
| ! | AGATTGGTTCCTTTACTGGT+AGG | + | chr4_4:80275677-80275696 | Msa0707040:intron | 40.0% |
| ! | CTTTACAACTTGCTTGCTCT+TGG | - | chr4_4:80275734-80275753 | None:intergenic | 40.0% |
| GCAAGCAAGTTGTAAAGTCA+AGG | + | chr4_4:80275737-80275756 | Msa0707040:CDS | 40.0% | |
| ! | CAATTTCACTGCTTTGGATG+CGG | - | chr4_4:80276036-80276055 | None:intergenic | 40.0% |
| AAAATATCACTCTCCTGAGG+AGG | + | chr4_4:80276219-80276238 | Msa0707040:CDS | 40.0% | |
| ACTGCAGTTAGATTGGATTG+TGG | + | chr4_4:80276407-80276426 | Msa0707040:intron | 40.0% | |
| !! | CTGTCGCAAGTTGATAAGAA+AGG | - | chr4_4:80276444-80276463 | None:intergenic | 40.0% |
| TGACCGACAGCTGAATTAAT+TGG | + | chr4_4:80276586-80276605 | Msa0707040:intron | 40.0% | |
| AAGCACGGTGAACTACTAAA+AGG | - | chr4_4:80276685-80276704 | None:intergenic | 40.0% | |
| ! | ACAATTTTTGAACGTGGCAG+AGG | + | chr4_4:80276792-80276811 | Msa0707040:intron | 40.0% |
| CTACAAGGTTCGGATTTGTA+AGG | - | chr4_4:80276840-80276859 | None:intergenic | 40.0% | |
| CAAATCCGAACCTTGTAGTT+TGG | + | chr4_4:80276842-80276861 | Msa0707040:intron | 40.0% | |
| TCCCCATTTGCAATTTCTGA+AGG | - | chr4_4:80276895-80276914 | None:intergenic | 40.0% | |
| AAAGCTGATGCAATACGGAT+TGG | + | chr4_4:80276925-80276944 | Msa0707040:CDS | 40.0% | |
| AATGGGGTTGAGACTTGATA+AGG | + | chr4_4:80277179-80277198 | Msa0707040:intron | 40.0% | |
| GTGCACCATAACATCTAAAG+AGG | - | chr4_4:80277356-80277375 | None:intergenic | 40.0% | |
| ACAGTATTCACGTTGCAGTT+CGG | + | chr4_4:80277378-80277397 | Msa0707040:intron | 40.0% | |
| ! | CACCTTGATGTTAGCATTGA+TGG | + | chr4_4:80277451-80277470 | Msa0707040:CDS | 40.0% |
| CTCCATCAATGCTAACATCA+AGG | - | chr4_4:80277456-80277475 | None:intergenic | 40.0% | |
| GCTACAAGGTGACTGAATTA+TGG | + | chr4_4:80277527-80277546 | Msa0707040:intron | 40.0% | |
| CATCATAGACTACACAGTTC+TGG | - | chr4_4:80277585-80277604 | None:intergenic | 40.0% | |
| GAACTGTGTAGTCTATGATG+TGG | + | chr4_4:80277585-80277604 | Msa0707040:intron | 40.0% | |
| ! | GTCACACTTGATTTTTCCAC+CGG | + | chr4_4:80277614-80277633 | Msa0707040:intron | 40.0% |
| ! | AGAAATACTGAAGGGCATGA+TGG | + | chr4_4:80277801-80277820 | Msa0707040:intron | 40.0% |
| ! | GAAATACTGAAGGGCATGAT+GGG | + | chr4_4:80277802-80277821 | Msa0707040:intron | 40.0% |
| ATCCAGATTCGTATCAATGC+CGG | + | chr4_4:80277927-80277946 | Msa0707040:intron | 40.0% | |
| CATTCAAGCTCGAATCAGAA+TGG | + | chr4_4:80278082-80278101 | Msa0707040:CDS | 40.0% | |
| !! | ACCTGGGTTTTATCTTGTCT+TGG | + | chr4_4:80278151-80278170 | Msa0707040:CDS | 40.0% |
| !! | CCTGGGTTTTATCTTGTCTT+GGG | + | chr4_4:80278152-80278171 | Msa0707040:CDS | 40.0% |
| !! | CTGGGTTTTATCTTGTCTTG+GGG | + | chr4_4:80278153-80278172 | Msa0707040:CDS | 40.0% |
| TCAGCGGATATAAATCCCAT+TGG | + | chr4_4:80278502-80278521 | Msa0707040:CDS | 40.0% | |
| CTGCTTACTTATACTGCCAA+TGG | - | chr4_4:80278521-80278540 | None:intergenic | 40.0% | |
| CATTGGCAGTATAAGTAAGC+AGG | + | chr4_4:80278519-80278538 | Msa0707040:CDS | 40.0% | |
| CCAAAGATGAGTAACCAAGA+TGG | - | chr4_4:80278576-80278595 | None:intergenic | 40.0% | |
| CCATCTTGGTTACTCATCTT+TGG | + | chr4_4:80278573-80278592 | Msa0707040:CDS | 40.0% | |
| ACAGATTGCCAGAAAATGTC+TGG | - | chr4_4:80278876-80278895 | None:intergenic | 40.0% | |
| GCAATCTGTTATAAGGGTGA+TGG | + | chr4_4:80278887-80278906 | Msa0707040:intron | 40.0% | |
| TGCTCAATTAAGAACGAGTG+AGG | - | chr4_4:80279089-80279108 | None:intergenic | 40.0% | |
| !! | GCAGCTTGATGAAGTTGATA+TGG | + | chr4_4:80279106-80279125 | Msa0707040:intron | 40.0% |
| TGATATGGGAATGACTTACG+AGG | + | chr4_4:80279121-80279140 | Msa0707040:CDS | 40.0% | |
| ! | CTACGCAAAATTTTCCGTTG+TGG | + | chr4_4:80279164-80279183 | Msa0707040:CDS | 40.0% |
| TATACCTGGAACATGGAAAC+TGG | - | chr4_4:80279191-80279210 | None:intergenic | 40.0% | |
| CATGAGATATACCTGGAACA+TGG | - | chr4_4:80279198-80279217 | None:intergenic | 40.0% | |
| GGACAAACATGAGATATACC+TGG | - | chr4_4:80279205-80279224 | None:intergenic | 40.0% | |
| CCTATGGGGTTTATCTTTCT+CGG | - | chr4_4:80279393-80279412 | None:intergenic | 40.0% | |
| ! | TTACCTGCATGTCATTTGAC+AGG | + | chr4_4:80279432-80279451 | Msa0707040:intron | 40.0% |
| !!! | TGAACTTATTTTGGCCTTGC+AGG | - | chr4_4:80279488-80279507 | None:intergenic | 40.0% |
| GTGACTTAGGATACATGGTA+AGG | - | chr4_4:80280005-80280024 | None:intergenic | 40.0% | |
| !! | CTCCGTATCGATTGAAAACA+TGG | - | chr4_4:80280049-80280068 | None:intergenic | 40.0% |
| !!! | ACTTTTTCAGCCACTTGTGA+TGG | - | chr4_4:80280227-80280246 | None:intergenic | 40.0% |
| AAAGTCAGGGTTGAATTGCT+AGG | + | chr4_4:80280340-80280359 | Msa0707040:intron | 40.0% | |
| AAAACAGAGAGAGAGAGAAC+CGG | - | chr4_4:80280394-80280413 | None:intergenic | 40.0% | |
| CAAGATGGCCGTATCAATTT+CGG | + | chr4_4:80280519-80280538 | Msa0707040:CDS | 40.0% | |
| !! | ATTAGATGGTGTTGGTGGAA+TGG | + | chr4_4:80280619-80280638 | Msa0707040:CDS | 40.0% |
| !! | TTAGATGGTGTTGGTGGAAT+GGG | + | chr4_4:80280620-80280639 | Msa0707040:CDS | 40.0% |
| ACACTACACATGGGATGAAA+GGG | - | chr4_4:80280819-80280838 | None:intergenic | 40.0% | |
| TACACTACACATGGGATGAA+AGG | - | chr4_4:80280820-80280839 | None:intergenic | 40.0% | |
| GTTGAAGTGGAAATTGCGAG+AGG | - | chr4_4:80273543-80273562 | None:intergenic | 45.0% | |
| AATCACGATGAGGCTCTTGA+AGG | + | chr4_4:80273597-80273616 | Msa0707040:exon | 45.0% | |
| !! | CAATCTCAACCAATGGGCTA+TGG | + | chr4_4:80273630-80273649 | Msa0707040:CDS | 45.0% |
| ! | GGCTTGTTTGGATTTGGAGA+TGG | - | chr4_4:80273689-80273708 | None:intergenic | 45.0% |
| !! | ATAACCGGGGATTTCGAGTT+CGG | - | chr4_4:80273734-80273753 | None:intergenic | 45.0% |
| !! | TGGTGTCGAGTTCTAAGAAG+TGG | - | chr4_4:80273768-80273787 | None:intergenic | 45.0% |
| ! | ACTTCCTCCTCATGTTTCTG+AGG | + | chr4_4:80274118-80274137 | Msa0707040:CDS | 45.0% |
| AATGCCTCAGAAACATGAGG+AGG | - | chr4_4:80274125-80274144 | None:intergenic | 45.0% | |
| !! | TCCTCATGTTTCTGAGGCAT+TGG | + | chr4_4:80274124-80274143 | Msa0707040:CDS | 45.0% |
| !! | CCTCATGTTTCTGAGGCATT+GGG | + | chr4_4:80274125-80274144 | Msa0707040:CDS | 45.0% |
| ATCACCAACACTTCCGTTGA+AGG | - | chr4_4:80274364-80274383 | None:intergenic | 45.0% | |
| GTGTCTGATGGAGAACAGAA+CGG | - | chr4_4:80274725-80274744 | None:intergenic | 45.0% | |
| TGTTACGTCCTTACTTTCCC+TGG | + | chr4_4:80274748-80274767 | Msa0707040:intron | 45.0% | |
| AAAGAGAGCCAGGGAAAGTA+AGG | - | chr4_4:80274759-80274778 | None:intergenic | 45.0% | |
| ! | GTGTCGACGATGTGTTTACT+CGG | + | chr4_4:80274800-80274819 | Msa0707040:intron | 45.0% |
| TCAATCACAAGATTGCCGCA+TGG | - | chr4_4:80274902-80274921 | None:intergenic | 45.0% | |
| TAATGCAAGCTCAGCATGAG+GGG | - | chr4_4:80275115-80275134 | None:intergenic | 45.0% | |
| !! | ATAGGTGCTACTCATACTCG+TGG | + | chr4_4:80275213-80275232 | Msa0707040:CDS | 45.0% |
| AGTAATCACCAAGGCTGTGA+TGG | + | chr4_4:80275252-80275271 | Msa0707040:CDS | 45.0% | |
| AGATGGATGTTCCAGTGTTG+TGG | + | chr4_4:80275496-80275515 | Msa0707040:intron | 45.0% | |
| TGCTCAGATAGATCTTGACG+TGG | + | chr4_4:80275580-80275599 | Msa0707040:CDS | 45.0% | |
| ACGCCTTTCTGTTCCTCTTA+AGG | + | chr4_4:80275812-80275831 | Msa0707040:CDS | 45.0% | |
| GGTATTCATGGCGACATCAT+AGG | - | chr4_4:80275903-80275922 | None:intergenic | 45.0% | |
| !! | CCAAATGCTATTTCCTCCTC+AGG | - | chr4_4:80276235-80276254 | None:intergenic | 45.0% |
| CCTGAGGAGGAAATAGCATT+TGG | + | chr4_4:80276232-80276251 | Msa0707040:CDS | 45.0% | |
| GAGGAAATAGCATTTGGACC+TGG | + | chr4_4:80276238-80276257 | Msa0707040:CDS | 45.0% | |
| TAATCCCATAACCAGCAACC+AGG | - | chr4_4:80276259-80276278 | None:intergenic | 45.0% | |
| ! | TTACGAAGAAGTGGAGCATC+TGG | + | chr4_4:80276280-80276299 | Msa0707040:CDS | 45.0% |
| ACTTACCTTTCACGACCATC+TGG | - | chr4_4:80276372-80276391 | None:intergenic | 45.0% | |
| GCAAATTCTGTGCTGTCTGT+AGG | - | chr4_4:80276973-80276992 | None:intergenic | 45.0% | |
| GTTGCAGTTCGGAAATGACA+AGG | + | chr4_4:80277389-80277408 | Msa0707040:intron | 45.0% | |
| AATTTCCTCTGCCAGTACCT+TGG | - | chr4_4:80277422-80277441 | None:intergenic | 45.0% | |
| !! | AAGGTACTGGCAGAGGAAAT+TGG | + | chr4_4:80277421-80277440 | Msa0707040:CDS | 45.0% |
| ! | TGGCAGAGGAAATTGGTTCA+TGG | + | chr4_4:80277428-80277447 | Msa0707040:CDS | 45.0% |
| AATTCAGTCACCTTGTAGCG+TGG | - | chr4_4:80277526-80277545 | None:intergenic | 45.0% | |
| TCAACATAGAACTCCACCTC+AGG | + | chr4_4:80277683-80277702 | Msa0707040:intron | 45.0% | |
| TAGGACACCGAATGAGAAAG+TGG | + | chr4_4:80277714-80277733 | Msa0707040:intron | 45.0% | |
| AGGACACCGAATGAGAAAGT+GGG | + | chr4_4:80277715-80277734 | Msa0707040:intron | 45.0% | |
| TTGCCCAAACCAAAAGTCTG+TGG | + | chr4_4:80277763-80277782 | Msa0707040:intron | 45.0% | |
| TGTTAGCATCACTCTTGCCT+TGG | + | chr4_4:80278117-80278136 | Msa0707040:CDS | 45.0% | |
| GTTAGCATCACTCTTGCCTT+GGG | + | chr4_4:80278118-80278137 | Msa0707040:CDS | 45.0% | |
| CTTGGGTTCACAACAAACCT+GGG | + | chr4_4:80278135-80278154 | Msa0707040:CDS | 45.0% | |
| CCCAAGACAAGATAAAACCC+AGG | - | chr4_4:80278155-80278174 | None:intergenic | 45.0% | |
| AGATGAGTAACCAAGATGGC+TGG | - | chr4_4:80278572-80278591 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTGGGTGAAGTCT+TGG | + | chr4_4:80278905-80278924 | Msa0707040:intron | 45.0% |
| ACATGGAAACTGGACCACAA+CGG | - | chr4_4:80279181-80279200 | None:intergenic | 45.0% | |
| ! | GAAGGAACAGTGAAAGCATG+TGG | + | chr4_4:80279297-80279316 | Msa0707040:intron | 45.0% |
| CCGAGAAAGATAAACCCCAT+AGG | + | chr4_4:80279390-80279409 | Msa0707040:intron | 45.0% | |
| GTCACTGTCACAGTAGTCTT+TGG | + | chr4_4:80279587-80279606 | Msa0707040:intron | 45.0% | |
| !! | ATGATAGGAAGGTGTCAAGG+TGG | - | chr4_4:80280294-80280313 | None:intergenic | 45.0% |
| ACTACATACCTCGGCATGAT+AGG | - | chr4_4:80280309-80280328 | None:intergenic | 45.0% | |
| !! | ACGCTCCTAAAGATTTTGGC+CGG | + | chr4_4:80280372-80280391 | Msa0707040:intron | 45.0% |
| GAGAACCGGCCAAAATCTTT+AGG | - | chr4_4:80280380-80280399 | None:intergenic | 45.0% | |
| CTTGCAGAGTTATTCACCAG+AGG | + | chr4_4:80280460-80280479 | Msa0707040:intron | 45.0% | |
| ATCAGCAAACCATGAGTCAG+TGG | + | chr4_4:80280589-80280608 | Msa0707040:CDS | 45.0% | |
| TCAGTGGCAGCTTCATTAGA+TGG | + | chr4_4:80280605-80280624 | Msa0707040:CDS | 45.0% | |
| GCAGCTTCATTAGATGGTGT+TGG | + | chr4_4:80280611-80280630 | Msa0707040:CDS | 45.0% | |
| ! | GCTTCATTAGATGGTGTTGG+TGG | + | chr4_4:80280614-80280633 | Msa0707040:CDS | 45.0% |
| ATTTGGATTGCCTGAACCTG+CGG | - | chr4_4:80280654-80280673 | None:intergenic | 45.0% | |
| GGTTCAGGCAATCCAAATGT+CGG | + | chr4_4:80280656-80280675 | Msa0707040:CDS | 45.0% | |
| CATGTGCAAGACTGCAAATC+TGG | + | chr4_4:80280736-80280755 | Msa0707040:three_prime_UTR | 45.0% | |
| AAATTGCGAGAGGGTCGGTA+TGG | - | chr4_4:80273533-80273552 | None:intergenic | 50.0% | |
| AGTGGAAATTGCGAGAGGGT+CGG | - | chr4_4:80273538-80273557 | None:intergenic | 50.0% | |
| !! | TTTCGAGTTCGGGTCCAAGA+CGG | - | chr4_4:80273723-80273742 | None:intergenic | 50.0% |
| !! | TAACCGGGGATTTCGAGTTC+GGG | - | chr4_4:80273733-80273752 | None:intergenic | 50.0% |
| GAACTCGAAATCCCCGGTTA+TGG | + | chr4_4:80273733-80273752 | Msa0707040:CDS | 50.0% | |
| TGGTCTTCACAGCCATAACC+GGG | - | chr4_4:80273748-80273767 | None:intergenic | 50.0% | |
| GTGGTCTTCACAGCCATAAC+CGG | - | chr4_4:80273749-80273768 | None:intergenic | 50.0% | |
| CCCAATGCCTCAGAAACATG+AGG | - | chr4_4:80274128-80274147 | None:intergenic | 50.0% | |
| CACTTACACCGACACGAACA+CGG | + | chr4_4:80274254-80274273 | Msa0707040:intron | 50.0% | |
| ACTTACACCGACACGAACAC+GGG | + | chr4_4:80274255-80274274 | Msa0707040:intron | 50.0% | |
| GGAGAACAGAACGGTACAAC+AGG | - | chr4_4:80274716-80274735 | None:intergenic | 50.0% | |
| GCATCAGCATTGCATCCATG+CGG | + | chr4_4:80274884-80274903 | Msa0707040:intron | 50.0% | |
| AATGCAAGCTCAGCATGAGG+GGG | - | chr4_4:80275114-80275133 | None:intergenic | 50.0% | |
| AATCACCAAGGCTGTGATGG+TGG | + | chr4_4:80275255-80275274 | Msa0707040:CDS | 50.0% | |
| ! | GATGGTGGTCGCCTTTACTA+TGG | + | chr4_4:80275270-80275289 | Msa0707040:CDS | 50.0% |
| GTGGTCGCCTTTACTATGGT+AGG | + | chr4_4:80275274-80275293 | Msa0707040:intron | 50.0% | |
| GGCTTGCAACCTACCAGTAA+AGG | - | chr4_4:80275689-80275708 | None:intergenic | 50.0% | |
| TGGTAGGTTGCAAGCCTTAG+AGG | + | chr4_4:80275693-80275712 | Msa0707040:intron | 50.0% | |
| TAGCATTTGGACCTGGTTGC+TGG | + | chr4_4:80276245-80276264 | Msa0707040:CDS | 50.0% | |
| ! | TTGGACCTGGTTGCTGGTTA+TGG | + | chr4_4:80276251-80276270 | Msa0707040:CDS | 50.0% |
| ! | TGGACCTGGTTGCTGGTTAT+GGG | + | chr4_4:80276252-80276271 | Msa0707040:CDS | 50.0% |
| TTTCTGCTCCCTCTTTCTGG+TGG | + | chr4_4:80276304-80276323 | Msa0707040:CDS | 50.0% | |
| TGTCTGCTCCACCAGAAAGA+GGG | - | chr4_4:80276315-80276334 | None:intergenic | 50.0% | |
| TCCTCTGTTGCTGCGATTGT+TGG | + | chr4_4:80276337-80276356 | Msa0707040:CDS | 50.0% | |
| TCCAACAATCGCAGCAACAG+AGG | - | chr4_4:80276341-80276360 | None:intergenic | 50.0% | |
| TGTTGGATGCATGTGCCAGA+TGG | + | chr4_4:80276354-80276373 | Msa0707040:CDS | 50.0% | |
| ATGTGCCAGATGGTCGTGAA+AGG | + | chr4_4:80276364-80276383 | Msa0707040:CDS | 50.0% | |
| !! | CTCATTCGGTGTCCTATCAG+AGG | - | chr4_4:80277710-80277729 | None:intergenic | 50.0% |
| GCTGAGCCCACTTTCTCATT+CGG | - | chr4_4:80277724-80277743 | None:intergenic | 50.0% | |
| ! | GAATGAGAAAGTGGGCTCAG+CGG | + | chr4_4:80277723-80277742 | Msa0707040:intron | 50.0% |
| ! | AATGAGAAAGTGGGCTCAGC+GGG | + | chr4_4:80277724-80277743 | Msa0707040:intron | 50.0% |
| !! | GTCCGGCATTGATACGAATC+TGG | - | chr4_4:80277932-80277951 | None:intergenic | 50.0% |
| !! | CCAGGTTTGTTGTGAACCCA+AGG | - | chr4_4:80278137-80278156 | None:intergenic | 50.0% |
| CCTTGGGTTCACAACAAACC+TGG | + | chr4_4:80278134-80278153 | Msa0707040:CDS | 50.0% | |
| ATCTTCGGTCATTCCTGCGA+TGG | + | chr4_4:80278542-80278561 | Msa0707040:CDS | 50.0% | |
| TCTTCGGTCATTCCTGCGAT+GGG | + | chr4_4:80278543-80278562 | Msa0707040:CDS | 50.0% | |
| ATAGGCTCCAGTTCAGCTGT+GGG | - | chr4_4:80278619-80278638 | None:intergenic | 50.0% | |
| TATAGGCTCCAGTTCAGCTG+TGG | - | chr4_4:80278620-80278639 | None:intergenic | 50.0% | |
| !! | TTTCAGTGGCCTTGTTCTCC+TGG | + | chr4_4:80278995-80279014 | Msa0707040:intron | 50.0% |
| !! | TTCAGTGGCCTTGTTCTCCT+GGG | + | chr4_4:80278996-80279015 | Msa0707040:intron | 50.0% |
| TGGTCCAGTTTCCATGTTCC+AGG | + | chr4_4:80279184-80279203 | Msa0707040:CDS | 50.0% | |
| CGACCTGTCAAATGACATGC+AGG | - | chr4_4:80279438-80279457 | None:intergenic | 50.0% | |
| TATTGTTCGCTGGTCCTGCA+AGG | + | chr4_4:80279471-80279490 | Msa0707040:intron | 50.0% | |
| TCGATACGGAGAGCTCTACT+TGG | + | chr4_4:80280058-80280077 | Msa0707040:intron | 50.0% | |
| !! | GGCATGATAGGAAGGTGTCA+AGG | - | chr4_4:80280297-80280316 | None:intergenic | 50.0% |
| CATACCTCGGCATGATAGGA+AGG | - | chr4_4:80280305-80280324 | None:intergenic | 50.0% | |
| CGATGAACTCGTACATGAGC+TGG | + | chr4_4:80280547-80280566 | Msa0707040:CDS | 50.0% | |
| !! | ATGAAGCTGCCACTGACTCA+TGG | - | chr4_4:80280601-80280620 | None:intergenic | 50.0% |
| TTCGGGTCCAAGACGGATGA+CGG | - | chr4_4:80273716-80273735 | None:intergenic | 55.0% | |
| GGTCTTCACAGCCATAACCG+GGG | - | chr4_4:80273747-80273766 | None:intergenic | 55.0% | |
| GTCATGACCCGTGTTCGTGT+CGG | - | chr4_4:80274265-80274284 | None:intergenic | 55.0% | |
| !! | GGTGCTACTCATACTCGTGG+AGG | + | chr4_4:80275216-80275235 | Msa0707040:CDS | 55.0% |
| TCGCCCTCCCAAACACACAA+TGG | - | chr4_4:80275350-80275369 | None:intergenic | 55.0% | |
| ATTGTGTGTTTGGGAGGGCG+AGG | + | chr4_4:80275349-80275368 | Msa0707040:intron | 55.0% | |
| GGCTTTCTGCTCCCTCTTTC+TGG | + | chr4_4:80276301-80276320 | Msa0707040:CDS | 55.0% | |
| CTGTCTGCTCCACCAGAAAG+AGG | - | chr4_4:80276316-80276335 | None:intergenic | 55.0% | |
| AATGACAAGGTCGCGAGCCA+AGG | + | chr4_4:80277402-80277421 | Msa0707040:CDS | 55.0% | |
| TCCACCTCAGGACCTCTGAT+AGG | + | chr4_4:80277695-80277714 | Msa0707040:intron | 55.0% | |
| TCCTATCAGAGGTCCTGAGG+TGG | - | chr4_4:80277699-80277718 | None:intergenic | 55.0% | |
| GTGTCCTATCAGAGGTCCTG+AGG | - | chr4_4:80277702-80277721 | None:intergenic | 55.0% | |
| GGAGCTCCAACGTGGATGAA+GGG | + | chr4_4:80278174-80278193 | Msa0707040:CDS | 55.0% | |
| ACGCAACCCTTCATCCACGT+TGG | - | chr4_4:80278183-80278202 | None:intergenic | 55.0% | |
| AACGTGGATGAAGGGTTGCG+TGG | + | chr4_4:80278182-80278201 | Msa0707040:CDS | 55.0% | |
| GTTGCGTGGCTACTTGACGA+AGG | + | chr4_4:80278196-80278215 | Msa0707040:CDS | 55.0% | |
| GACACCTTCCTATCATGCCG+AGG | + | chr4_4:80280298-80280317 | Msa0707040:CDS | 55.0% | |
| !! | GGCGCCGGCTTGTTTGGATT+TGG | - | chr4_4:80273695-80273714 | None:intergenic | 60.0% |
| GGACCCGAACTCGAAATCCC+CGG | + | chr4_4:80273727-80273746 | Msa0707040:CDS | 60.0% | |
| AGCTCAGCATGAGGGGGAGA+TGG | - | chr4_4:80275108-80275127 | None:intergenic | 60.0% | |
| AAGGTCGCGAGCCAAGGTAC+TGG | + | chr4_4:80277408-80277427 | Msa0707040:CDS | 60.0% | |
| GGGAAAGCGACCACGCTACA+AGG | + | chr4_4:80277513-80277532 | Msa0707040:CDS | 60.0% | |
| TGTCTTGGGGAGCTCCAACG+TGG | + | chr4_4:80278166-80278185 | Msa0707040:CDS | 60.0% | |
| GGGAGCTCCAACGTGGATGA+AGG | + | chr4_4:80278173-80278192 | Msa0707040:CDS | 60.0% | |
| AGCTCCACCCACAGCTGAAC+TGG | + | chr4_4:80278609-80278628 | Msa0707040:CDS | 60.0% | |
| !! | GATGACGGCGCCGGCTTGTT+TGG | - | chr4_4:80273701-80273720 | None:intergenic | 65.0% |
| ! | TCCAAGACGGATGACGGCGC+CGG | - | chr4_4:80273710-80273729 | None:intergenic | 65.0% |
| GGCGACCACCATCACAGCCT+TGG | - | chr4_4:80275263-80275282 | None:intergenic | 65.0% | |
| !! | GCGAGCCAAGGTACTGGCAG+AGG | + | chr4_4:80277414-80277433 | Msa0707040:CDS | 65.0% |
| CGATGGGCAGCCAGCCATCT+TGG | + | chr4_4:80278559-80278578 | Msa0707040:CDS | 65.0% | |
| GGCTCCAGTTCAGCTGTGGG+TGG | - | chr4_4:80278616-80278635 | None:intergenic | 65.0% | |
| GGAATGGGAGTTGCTGCCGC+AGG | + | chr4_4:80280635-80280654 | Msa0707040:CDS | 65.0% | |
| GGAGTTGCTGCCGCAGGTTC+AGG | + | chr4_4:80280641-80280660 | Msa0707040:CDS | 65.0% | |
| ! | GATGGCTGGCTGCCCATCGC+AGG | - | chr4_4:80278558-80278577 | None:intergenic | 70.0% |
| GCCGGCGCCGTCATCCGTCT+TGG | + | chr4_4:80273706-80273725 | Msa0707040:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80273488 | 80281037 | 80273488 | ID=Msa0707040;Name=Msa0707040 |
| chr4_4 | mRNA | 80273488 | 80281037 | 80273488 | ID=Msa0707040-mRNA-1;Parent=Msa0707040;Name=Msa0707040-mRNA-1;_AED=0.11;_eAED=0.11;_QI=116|0.91|0.92|1|1|1|13|352|727 |
| chr4_4 | exon | 80273488 | 80273797 | 80273488 | ID=Msa0707040-mRNA-1:exon:26001;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80273890 | 80274183 | 80273890 | ID=Msa0707040-mRNA-1:exon:26002;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80275068 | 80275291 | 80275068 | ID=Msa0707040-mRNA-1:exon:26003;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80275498 | 80275601 | 80275498 | ID=Msa0707040-mRNA-1:exon:26004;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80275699 | 80275833 | 80275699 | ID=Msa0707040-mRNA-1:exon:26005;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80276217 | 80276385 | 80276217 | ID=Msa0707040-mRNA-1:exon:26006;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80276899 | 80277034 | 80276899 | ID=Msa0707040-mRNA-1:exon:26007;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80277396 | 80277534 | 80277396 | ID=Msa0707040-mRNA-1:exon:26008;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80278041 | 80278217 | 80278041 | ID=Msa0707040-mRNA-1:exon:26009;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80278490 | 80278657 | 80278490 | ID=Msa0707040-mRNA-1:exon:26010;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80279110 | 80279205 | 80279110 | ID=Msa0707040-mRNA-1:exon:26011;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80280191 | 80280319 | 80280191 | ID=Msa0707040-mRNA-1:exon:26012;Parent=Msa0707040-mRNA-1 |
| chr4_4 | exon | 80280467 | 80281037 | 80280467 | ID=Msa0707040-mRNA-1:exon:26013;Parent=Msa0707040-mRNA-1 |
| chr4_4 | five_prime_UTR | 80273488 | 80273603 | 80273488 | ID=Msa0707040-mRNA-1:five_prime_utr;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80273604 | 80273797 | 80273604 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80273890 | 80274183 | 80273890 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80275068 | 80275291 | 80275068 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80275498 | 80275601 | 80275498 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80275699 | 80275833 | 80275699 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80276217 | 80276385 | 80276217 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80276899 | 80277034 | 80276899 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80277396 | 80277534 | 80277396 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80278041 | 80278217 | 80278041 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80278490 | 80278657 | 80278490 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80279110 | 80279205 | 80279110 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80280191 | 80280319 | 80280191 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | CDS | 80280467 | 80280685 | 80280467 | ID=Msa0707040-mRNA-1:cds;Parent=Msa0707040-mRNA-1 |
| chr4_4 | three_prime_UTR | 80280686 | 80281037 | 80280686 | ID=Msa0707040-mRNA-1:three_prime_utr;Parent=Msa0707040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
