Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133530 | XP_013447253.1 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133530 | sp|Q9C723|NADE_ARATH | 79.564 | 734 | 134 | 3 | 1 | 727 | 1 | 725 | 0.0 | 1249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133530 | A0A072U616 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1133530 | 0.821952 | 3.070105e-53 | -8.615850e-47 |
| Msa0012780 | Msa1133530 | -0.863127 | 3.106609e-64 | -8.615850e-47 |
| Msa0012820 | Msa1133530 | -0.826801 | 2.222678e-54 | -8.615850e-47 |
| Msa0017420 | Msa1133530 | 0.804894 | 1.735036e-49 | -8.615850e-47 |
| Msa0020630 | Msa1133530 | 0.800857 | 1.183932e-48 | -8.615850e-47 |
| Msa0026930 | Msa1133530 | 0.811491 | 6.817164e-51 | -8.615850e-47 |
| Msa0029020 | Msa1133530 | -0.812921 | 3.323289e-51 | -8.615850e-47 |
| Msa0035110 | Msa1133530 | 0.806839 | 6.767639e-50 | -8.615850e-47 |
| Msa0040550 | Msa1133530 | -0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0053960 | Msa1133530 | 0.808336 | 3.256517e-50 | -8.615850e-47 |
| Msa0061590 | Msa1133530 | -0.819520 | 1.112552e-52 | -8.615850e-47 |
| Msa0061600 | Msa1133530 | -0.836041 | 1.180224e-56 | -8.615850e-47 |
| Msa0064550 | Msa1133530 | 0.813364 | 2.657128e-51 | -8.615850e-47 |
| Msa0072830 | Msa1133530 | 0.811261 | 7.647831e-51 | -8.615850e-47 |
| Msa0072860 | Msa1133530 | 0.815681 | 8.163151e-52 | -8.615850e-47 |
| Msa0074780 | Msa1133530 | 0.807037 | 6.146435e-50 | -8.615850e-47 |
| Msa0096510 | Msa1133530 | 0.817968 | 2.504552e-52 | -8.615850e-47 |
| Msa0104360 | Msa1133530 | 0.818362 | 2.039061e-52 | -8.615850e-47 |
| Msa0106110 | Msa1133530 | -0.855860 | 4.750416e-62 | -8.615850e-47 |
| Msa0106130 | Msa1133530 | -0.820988 | 5.126024e-53 | -8.615850e-47 |
| Msa0109490 | Msa1133530 | 0.809763 | 1.611121e-50 | -8.615850e-47 |
| Msa0627050 | Msa1133530 | 0.801339 | 9.434027e-49 | -8.615850e-47 |
| Msa0629980 | Msa1133530 | 0.808087 | 3.678686e-50 | -8.615850e-47 |
| Msa0646570 | Msa1133530 | 0.808722 | 2.693093e-50 | -8.615850e-47 |
| Msa0650360 | Msa1133530 | 0.820123 | 8.099147e-53 | -8.615850e-47 |
| Msa0651240 | Msa1133530 | 0.800993 | 1.110312e-48 | -8.615850e-47 |
| Msa0651400 | Msa1133530 | 0.810223 | 1.282639e-50 | -8.615850e-47 |
| Msa0668090 | Msa1133530 | 0.819828 | 9.461110e-53 | -8.615850e-47 |
| Msa0672850 | Msa1133530 | 0.805165 | 1.522994e-49 | -8.615850e-47 |
| Msa0675010 | Msa1133530 | 0.840316 | 9.357791e-58 | -8.615850e-47 |
| Msa0679780 | Msa1133530 | 0.807912 | 4.007893e-50 | -8.615850e-47 |
| Msa0707040 | Msa1133530 | 0.990578 | 2.643715e-183 | -8.615850e-47 |
| Msa0749150 | Msa1133530 | 0.800000 | 1.769149e-48 | -8.615850e-47 |
| Msa0752580 | Msa1133530 | 0.815244 | 1.020862e-51 | -8.615850e-47 |
| Msa0754500 | Msa1133530 | 0.808204 | 3.474584e-50 | -8.615850e-47 |
| Msa0775580 | Msa1133530 | 0.806898 | 6.578699e-50 | -8.615850e-47 |
| Msa0777500 | Msa1133530 | -0.804832 | 1.787560e-49 | -8.615850e-47 |
| Msa0792510 | Msa1133530 | 0.813079 | 3.069592e-51 | -8.615850e-47 |
| Msa0812970 | Msa1133530 | 0.810068 | 1.385247e-50 | -8.615850e-47 |
| Msa0826650 | Msa1133530 | 0.804355 | 2.248252e-49 | -8.615850e-47 |
| Msa0828570 | Msa1133530 | 0.809911 | 1.496955e-50 | -8.615850e-47 |
| Msa0828900 | Msa1133530 | 0.802952 | 4.395136e-49 | -8.615850e-47 |
| Msa0829430 | Msa1133530 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0830900 | Msa1133530 | 0.802148 | 6.435574e-49 | -8.615850e-47 |
| Msa0152640 | Msa1133530 | -0.808637 | 2.808658e-50 | -8.615850e-47 |
| Msa0152740 | Msa1133530 | -0.835787 | 1.369237e-56 | -8.615850e-47 |
| Msa0153440 | Msa1133530 | 0.829140 | 6.080191e-55 | -8.615850e-47 |
| Msa0154240 | Msa1133530 | 0.818653 | 1.752085e-52 | -8.615850e-47 |
| Msa0175920 | Msa1133530 | 0.804174 | 2.452030e-49 | -8.615850e-47 |
| Msa0199740 | Msa1133530 | 0.842634 | 2.293935e-58 | -8.615850e-47 |
| Msa0389060 | Msa1133530 | 0.821703 | 3.506600e-53 | -8.615850e-47 |
| Msa0405250 | Msa1133530 | -0.824138 | 9.493170e-54 | -8.615850e-47 |
| Msa0428850 | Msa1133530 | -0.800642 | 1.309730e-48 | -8.615850e-47 |
| Msa0455260 | Msa1133530 | 0.805686 | 1.184049e-49 | -8.615850e-47 |
| Msa0458790 | Msa1133530 | 0.814672 | 1.367349e-51 | -8.615850e-47 |
| Msa0981740 | Msa1133530 | 0.821224 | 4.524746e-53 | -8.615850e-47 |
| Msa0984000 | Msa1133530 | 0.802835 | 4.646570e-49 | -8.615850e-47 |
| Msa0984460 | Msa1133530 | -0.821156 | 4.690265e-53 | -8.615850e-47 |
| Msa1004210 | Msa1133530 | 0.836403 | 9.552782e-57 | -8.615850e-47 |
| Msa1004260 | Msa1133530 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
| Msa1018020 | Msa1133530 | -0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa1036390 | Msa1133530 | 0.810333 | 1.214376e-50 | -8.615850e-47 |
| Msa1046610 | Msa1133530 | 0.832348 | 9.953000e-56 | -8.615850e-47 |
| Msa1064210 | Msa1133530 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
| Msa1076680 | Msa1133530 | 0.824863 | 6.408971e-54 | -8.615850e-47 |
| Msa1080460 | Msa1133530 | 0.828027 | 1.129175e-54 | -8.615850e-47 |
| Msa1093390 | Msa1133530 | 0.811849 | 5.697546e-51 | -8.615850e-47 |
| Msa1102540 | Msa1133530 | 0.808863 | 2.513287e-50 | -8.615850e-47 |
| Msa0242290 | Msa1133530 | 0.811660 | 6.265624e-51 | -8.615850e-47 |
| Msa0264940 | Msa1133530 | -0.855345 | 6.714383e-62 | -8.615850e-47 |
| Msa0265980 | Msa1133530 | -0.812021 | 5.227696e-51 | -8.615850e-47 |
| Msa0270840 | Msa1133530 | 0.836926 | 7.028963e-57 | -8.615850e-47 |
| Msa0272420 | Msa1133530 | 0.810964 | 8.868635e-51 | -8.615850e-47 |
| Msa0298940 | Msa1133530 | 0.810179 | 1.311118e-50 | -8.615850e-47 |
| Msa0302990 | Msa1133530 | -0.856534 | 3.014932e-62 | -8.615850e-47 |
| Msa0363440 | Msa1133530 | 0.803181 | 3.940195e-49 | -8.615850e-47 |
| Msa1126170 | Msa1133530 | 0.805018 | 1.634366e-49 | -8.615850e-47 |
| Msa1133530 | Msa1138450 | 0.839905 | 1.197830e-57 | -8.615850e-47 |
| Msa1133530 | Msa1138480 | 0.830567 | 2.730942e-55 | -8.615850e-47 |
| Msa1133530 | Msa1151820 | 0.818121 | 2.312149e-52 | -8.615850e-47 |
| Msa1133530 | Msa1167000 | 0.817236 | 3.660717e-52 | -8.615850e-47 |
| Msa1133530 | Msa1173380 | 0.825133 | 5.534218e-54 | -8.615850e-47 |
| Msa1133530 | Msa1182800 | 0.808159 | 3.551172e-50 | -8.615850e-47 |
| Msa1133530 | Msa1182830 | 0.852530 | 4.346884e-61 | -8.615850e-47 |
| Msa1133530 | Msa1191390 | 0.819155 | 1.346930e-52 | -8.615850e-47 |
| Msa1133530 | Msa1199610 | 0.820539 | 6.503502e-53 | -8.615850e-47 |
| Msa1133530 | Msa1204430 | 0.801133 | 1.039799e-48 | -8.615850e-47 |
| Msa1133530 | Msa1222580 | 0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa1133530 | Msa1258280 | 0.820605 | 6.279114e-53 | -8.615850e-47 |
| Msa1133530 | Msa1278420 | 0.801374 | 9.279467e-49 | -8.615850e-47 |
| Msa1133530 | Msa1279330 | 0.801677 | 8.042946e-49 | -8.615850e-47 |
| Msa1133530 | Msa1298290 | 0.800592 | 1.340469e-48 | -8.615850e-47 |
| Msa1133530 | Msa1326000 | 0.820947 | 5.239661e-53 | -8.615850e-47 |
| Msa1133530 | Msa1328750 | 0.850740 | 1.396134e-60 | -8.615850e-47 |
| Msa1133530 | Msa1335970 | -0.805467 | 1.316448e-49 | -8.615850e-47 |
| Msa1133530 | Msa1365120 | 0.829562 | 4.801505e-55 | -8.615850e-47 |
| Msa1133530 | Msa1373950 | 0.819950 | 8.870877e-53 | -8.615850e-47 |
| Msa1133530 | Msa1386020 | 0.811501 | 6.784024e-51 | -8.615850e-47 |
| Msa1133530 | Msa1386250 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa1133530 | Msa1412520 | 0.805495 | 1.298683e-49 | -8.615850e-47 |
| Msa1133530 | Msa1418200 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa1133530 | Msa1430760 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa1133530 | Msa1431240 | 0.824512 | 7.755425e-54 | -8.615850e-47 |
| Msa1133530 | Msa1460310 | -0.857102 | 2.051351e-62 | -8.615850e-47 |
| Msa0514330 | Msa1133530 | -0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0524050 | Msa1133530 | 0.820633 | 6.186651e-53 | -8.615850e-47 |
| Msa0530340 | Msa1133530 | 0.815206 | 1.040864e-51 | -8.615850e-47 |
| Msa0535020 | Msa1133530 | 0.816459 | 5.470546e-52 | -8.615850e-47 |
| Msa0535050 | Msa1133530 | 0.807317 | 5.363343e-50 | -8.615850e-47 |
| Msa0545230 | Msa1133530 | 0.826261 | 2.989935e-54 | -8.615850e-47 |
| Msa0573000 | Msa1133530 | 0.909097 | 8.293122e-82 | -8.615850e-47 |
| Msa0589600 | Msa1133530 | 0.814038 | 1.887814e-51 | -8.615850e-47 |
| Msa0589610 | Msa1133530 | 0.800834 | 1.196721e-48 | -8.615850e-47 |
| Msa0589640 | Msa1133530 | 0.823388 | 1.422542e-53 | -8.615850e-47 |
| Msa0591780 | Msa1133530 | 0.804195 | 2.427472e-49 | -8.615850e-47 |
| Msa0600820 | Msa1133530 | 0.828982 | 6.639207e-55 | -8.615850e-47 |
| Msa0853480 | Msa1133530 | 0.813368 | 2.651792e-51 | -8.615850e-47 |
| Msa0853500 | Msa1133530 | 0.808304 | 3.307541e-50 | -8.615850e-47 |
| Msa0862020 | Msa1133530 | 0.800898 | 1.161283e-48 | -8.615850e-47 |
| Msa0863250 | Msa1133530 | 0.800055 | 1.724367e-48 | -8.615850e-47 |
| Msa0864690 | Msa1133530 | 0.805118 | 1.557442e-49 | -8.615850e-47 |
| Msa0902980 | Msa1133530 | 0.803525 | 3.344427e-49 | -8.615850e-47 |
| Msa0909710 | Msa1133530 | 0.807632 | 4.597664e-50 | -8.615850e-47 |
| Msa0929400 | Msa1133530 | 0.825366 | 4.875497e-54 | -8.615850e-47 |
| Msa0948050 | Msa1133530 | -0.835397 | 1.718718e-56 | -8.615850e-47 |
| Msa0970050 | Msa1133530 | 0.818794 | 1.627204e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133530 | MtrunA17_Chr8g0388731 | 97.811 | 731 | 12 | 1 | 1 | 727 | 1 | 731 | 0.0 | 1486 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133530 | AT1G55090.1 | 79.564 | 734 | 134 | 3 | 1 | 727 | 1 | 725 | 0.0 | 1249 |
Find 209 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTCTGCTCCCTCTTTC+TGG | 0.065747 | 7_3:-87058608 | Msa1133530:CDS |
| CAACATCATTTAAAGAAAAT+TGG | 0.105248 | 7_3:+87059362 | None:intergenic |
| CATGCTGAGCTTGCATTAAA+TGG | 0.156645 | 7_3:-87059792 | Msa1133530:CDS |
| TACGAGGAACTATCTGTTTA+TGG | 0.202343 | 7_3:-87055772 | Msa1133530:CDS |
| TTGGACCTGGTTGCTGGTTA+TGG | 0.219491 | 7_3:-87058658 | Msa1133530:CDS |
| ATCTTGCATTATAAAGAAAT+TGG | 0.239593 | 7_3:+87054407 | None:intergenic |
| GTTATTCACCAGAGGATAAT+AGG | 0.260783 | 7_3:-87054441 | Msa1133530:CDS |
| TTCAATTAGATTCCGACATT+TGG | 0.271951 | 7_3:+87054241 | None:intergenic |
| GATGACGGCGCCGGCTTGTT+TGG | 0.281693 | 7_3:+87061211 | None:intergenic |
| ATGGAATCTATATATTTGTT+TGG | 0.281745 | 7_3:+87054149 | None:intergenic |
| TGGTCCAGTTTCCATGTTCC+AGG | 0.285193 | 7_3:-87055725 | Msa1133530:intron |
| CCATCTTGGTTACTCATCTT+TGG | 0.286324 | 7_3:-87056336 | Msa1133530:CDS |
| TCCTCTGTTGCTGCGATTGT+TGG | 0.297915 | 7_3:-87058572 | Msa1133530:CDS |
| CACCTTGATGTTAGCATTGA+TGG | 0.301302 | 7_3:-87057458 | Msa1133530:CDS |
| TGGACCTGGTTGCTGGTTAT+GGG | 0.301739 | 7_3:-87058657 | Msa1133530:CDS |
| ACGCCTTTCTGTTCCTCTTA+AGG | 0.304612 | 7_3:-87059097 | Msa1133530:intron |
| TGTTCCAGTGTTGTGGTTAA+TGG | 0.316625 | 7_3:-87059406 | Msa1133530:CDS |
| TCCTCATGTTTCTGAGGCAT+TGG | 0.318545 | 7_3:-87060785 | Msa1133530:CDS |
| GAGTTATTACGAATGGTTAA+TGG | 0.319596 | 7_3:+87061124 | None:intergenic |
| CAAGATGGCCGTATCAATTT+CGG | 0.328849 | 7_3:-87054390 | Msa1133530:CDS |
| AAATCAGTTCCATTTGGTTA+TGG | 0.330419 | 7_3:-87060757 | Msa1133530:CDS |
| GCAGCTTGATGAAGTTGATA+TGG | 0.333483 | 7_3:-87055803 | Msa1133530:intron |
| TGGAGATGGAGTCTTTGATT+TGG | 0.334425 | 7_3:+87061237 | None:intergenic |
| GGAGTTGCTGCCGCAGGTTC+AGG | 0.335423 | 7_3:-87054268 | Msa1133530:CDS |
| GTCTTTGATTTGGAGAAGAT+TGG | 0.335730 | 7_3:+87061247 | None:intergenic |
| TGGTAGGTTGCAAGCCTTAG+AGG | 0.338452 | 7_3:-87059216 | Msa1133530:intron |
| CATCAAGCTTTCTAAGTTGA+TGG | 0.339716 | 7_3:+87059736 | None:intergenic |
| GGCGCCGGCTTGTTTGGATT+TGG | 0.343154 | 7_3:+87061217 | None:intergenic |
| TCAAGTATTATTCGATAAAT+CGG | 0.347943 | 7_3:-87054651 | Msa1133530:CDS |
| CTCTCGGAACCTTTGATAAT+AGG | 0.348000 | 7_3:+87060952 | None:intergenic |
| TGGAATCTATATATTTGTTT+GGG | 0.353804 | 7_3:+87054150 | None:intergenic |
| TAGCATTTGGACCTGGTTGC+TGG | 0.357685 | 7_3:-87058664 | Msa1133530:CDS |
| CACAGTATAAAATACTCTTT+TGG | 0.361951 | 7_3:+87057917 | None:intergenic |
| AGCTCCACCCACAGCTGAAC+TGG | 0.364040 | 7_3:-87056300 | Msa1133530:CDS |
| CATGTGCAAGACTGCAAATC+TGG | 0.364062 | 7_3:-87054173 | Msa1133530:three_prime_UTR |
| CCTTGGGTTCACAACAAACC+TGG | 0.370888 | 7_3:-87056775 | Msa1133530:CDS |
| ATGCTGAGCTTGCATTAAAT+GGG | 0.371833 | 7_3:-87059791 | Msa1133530:CDS |
| ATCATTTGCAAGCCACATCT+TGG | 0.378781 | 7_3:+87060879 | None:intergenic |
| TGTTAGCATCACTCTTGCCT+TGG | 0.378857 | 7_3:-87056792 | Msa1133530:CDS |
| GTGGTCTTCACAGCCATAAC+CGG | 0.383872 | 7_3:+87061163 | None:intergenic |
| TCTTTGTTTCAAACACTTAC+GGG | 0.384485 | 7_3:-87057416 | Msa1133530:CDS |
| GTCTTTGTTTCAAACACTTA+CGG | 0.384605 | 7_3:-87057417 | Msa1133530:CDS |
| GACAATAAACTAACCTTAAG+AGG | 0.386044 | 7_3:+87059084 | None:intergenic |
| GTTAGCATCACTCTTGCCTT+GGG | 0.387419 | 7_3:-87056791 | Msa1133530:CDS |
| AAGAAATATTGATTGGTGAT+TGG | 0.389174 | 7_3:-87061005 | Msa1133530:CDS |
| AACATCATTTAAAGAAAATT+GGG | 0.390775 | 7_3:+87059363 | None:intergenic |
| TTACGAAGAAGTGGAGCATC+TGG | 0.393568 | 7_3:-87058629 | Msa1133530:CDS |
| CCTCATGTTTCTGAGGCATT+GGG | 0.396761 | 7_3:-87060784 | Msa1133530:CDS |
| ATAACCGGGGATTTCGAGTT+CGG | 0.397139 | 7_3:+87061178 | None:intergenic |
| CGGATTGGAAACTATATAGA+TGG | 0.397855 | 7_3:-87057969 | Msa1133530:CDS |
| CTATAACAAACTGAACTTGT+TGG | 0.398444 | 7_3:-87053969 | Msa1133530:three_prime_UTR |
| TTTCCTTCAGAAATTGCAAA+TGG | 0.399802 | 7_3:-87058020 | Msa1133530:intron |
| ACTACATACCTCGGCATGAT+AGG | 0.403171 | 7_3:+87054603 | None:intergenic |
| AAAGGAAGACAAAGACTATA+TGG | 0.406257 | 7_3:+87059132 | None:intergenic |
| CCTGAGGAGGAAATAGCATT+TGG | 0.407961 | 7_3:-87058677 | Msa1133530:CDS |
| CTTTACAACTTGCTTGCTCT+TGG | 0.410098 | 7_3:+87059178 | None:intergenic |
| AGCTACTTAAAGATCCTCTA+AGG | 0.411025 | 7_3:+87059202 | None:intergenic |
| AAGGTACTGGCAGAGGAAAT+TGG | 0.413079 | 7_3:-87057488 | Msa1133530:CDS |
| TATACCTGGAACATGGAAAC+TGG | 0.415696 | 7_3:+87055721 | None:intergenic |
| AACTTCGATGGTTTACTGCT+TGG | 0.416004 | 7_3:-87060843 | Msa1133530:CDS |
| TTTAAATGATGTTGAGGTTG+TGG | 0.424124 | 7_3:-87059353 | Msa1133530:CDS |
| CGATGGGCAGCCAGCCATCT+TGG | 0.433435 | 7_3:-87056350 | Msa1133530:CDS |
| TTAGATGGTGTTGGTGGAAT+GGG | 0.436891 | 7_3:-87054289 | Msa1133530:CDS |
| GTCTCTGTTGTTTGTTGAAG+TGG | 0.441826 | 7_3:+87061356 | None:intergenic |
| GATGGTGGTCGCCTTTACTA+TGG | 0.445130 | 7_3:-87059639 | Msa1133530:intron |
| GAACTCGAAATCCCCGGTTA+TGG | 0.445759 | 7_3:-87061176 | Msa1133530:CDS |
| ACTTACCTTTCACGACCATC+TGG | 0.449690 | 7_3:+87058540 | None:intergenic |
| TAACCGGGGATTTCGAGTTC+GGG | 0.455865 | 7_3:+87061179 | None:intergenic |
| TTCCTTCAGAAATTGCAAAT+GGG | 0.460972 | 7_3:-87058019 | Msa1133530:intron |
| TTCCGAGAGATACAATTGTC+AGG | 0.462968 | 7_3:-87060938 | Msa1133530:CDS |
| CAATCTCAACCAATGGGCTA+TGG | 0.470887 | 7_3:-87061279 | Msa1133530:CDS |
| TCAGTGGCAGCTTCATTAGA+TGG | 0.472410 | 7_3:-87054304 | Msa1133530:CDS |
| GTGTTTGAAACAAAGACAAA+AGG | 0.472972 | 7_3:+87057423 | None:intergenic |
| TCATTTGCAAGCCACATCTT+GGG | 0.476765 | 7_3:+87060880 | None:intergenic |
| TCTACGAAGTTACTCAATCT+AGG | 0.477408 | 7_3:+87061420 | None:intergenic |
| GCCGGCGCCGTCATCCGTCT+TGG | 0.477437 | 7_3:-87061203 | Msa1133530:CDS |
| CGATGAACTCGTACATGAGC+TGG | 0.481111 | 7_3:-87054362 | Msa1133530:CDS |
| TACACTACACATGGGATGAA+AGG | 0.481794 | 7_3:+87054092 | None:intergenic |
| CTCAGAATCTATGTTACAGA+TGG | 0.482926 | 7_3:-87054723 | Msa1133530:intron |
| GGCTTGTTTGGATTTGGAGA+TGG | 0.485111 | 7_3:+87061223 | None:intergenic |
| GATGGCTGGCTGCCCATCGC+AGG | 0.487074 | 7_3:+87056354 | None:intergenic |
| TGTTTGAAAGAAATATTGAT+TGG | 0.487416 | 7_3:-87061012 | Msa1133530:CDS |
| GGGAGCTCCAACGTGGATGA+AGG | 0.489079 | 7_3:-87056736 | Msa1133530:CDS |
| GATAACATAGTGTGTAGTAT+TGG | 0.489547 | 7_3:-87060979 | Msa1133530:CDS |
| TGTTTATGGGATCTGAAAAC+AGG | 0.489699 | 7_3:-87057896 | Msa1133530:intron |
| CCAAATGCTATTTCCTCCTC+AGG | 0.490563 | 7_3:+87058677 | None:intergenic |
| ATCTTCGGTCATTCCTGCGA+TGG | 0.492236 | 7_3:-87056367 | Msa1133530:CDS |
| ACACTACACATGGGATGAAA+GGG | 0.496650 | 7_3:+87054093 | None:intergenic |
| AATGGTGATGTTGTTGCTCA+AGG | 0.499320 | 7_3:-87059388 | Msa1133530:CDS |
| TGGCAGAGGAAATTGGTTCA+TGG | 0.503133 | 7_3:-87057481 | Msa1133530:CDS |
| TTAACAAAACCATAACCAAA+TGG | 0.503166 | 7_3:+87060748 | None:intergenic |
| ACTTCCTCCTCATGTTTCTG+AGG | 0.509841 | 7_3:-87060791 | Msa1133530:CDS |
| CTGCTTACTTATACTGCCAA+TGG | 0.510061 | 7_3:+87056391 | None:intergenic |
| GTATAAGTAAGCAGGATCTT+CGG | 0.511899 | 7_3:-87056382 | Msa1133530:CDS |
| ATTAGATGGTGTTGGTGGAA+TGG | 0.513323 | 7_3:-87054290 | Msa1133530:CDS |
| AATCACGATGAGGCTCTTGA+AGG | 0.517734 | 7_3:-87061312 | Msa1133530:exon |
| CATTGGCAGTATAAGTAAGC+AGG | 0.517825 | 7_3:-87056390 | Msa1133530:CDS |
| TCCAAGACGGATGACGGCGC+CGG | 0.522702 | 7_3:+87061202 | None:intergenic |
| AAAGCTGATGCAATACGGAT+TGG | 0.522800 | 7_3:-87057984 | Msa1133530:CDS |
| GGCGACCACCATCACAGCCT+TGG | 0.524751 | 7_3:+87059649 | None:intergenic |
| AATTTCTTTATAATGCAAGA+TGG | 0.525324 | 7_3:-87054405 | Msa1133530:CDS |
| GTTTACTGCTTGGAAACAAA+GGG | 0.526848 | 7_3:-87060833 | Msa1133530:CDS |
| AAGGTCGCGAGCCAAGGTAC+TGG | 0.527618 | 7_3:-87057501 | Msa1133530:CDS |
| TACTTGCAATCTCAACCAAT+GGG | 0.527623 | 7_3:-87061285 | Msa1133530:CDS |
| CTTGGGTTCACAACAAACCT+GGG | 0.529526 | 7_3:-87056774 | Msa1133530:CDS |
| TCCTTCAGAAATTGCAAATG+GGG | 0.529905 | 7_3:-87058018 | Msa1133530:intron |
| TGTTTGAAACAAAGACAAAA+GGG | 0.530094 | 7_3:+87057424 | None:intergenic |
| AACCTGACAATTGTATCTCT+CGG | 0.530713 | 7_3:+87060936 | None:intergenic |
| CTGTCTGCTCCACCAGAAAG+AGG | 0.531787 | 7_3:+87058596 | None:intergenic |
| TGGGATTATTTACGAAGAAG+TGG | 0.532803 | 7_3:-87058638 | Msa1133530:CDS |
| GCAAATTCTGTGCTGTCTGT+AGG | 0.533182 | 7_3:+87057939 | None:intergenic |
| TGGTCTTCACAGCCATAACC+GGG | 0.535392 | 7_3:+87061164 | None:intergenic |
| AAGTTAAAGCTGATGCAATA+CGG | 0.540512 | 7_3:-87057989 | Msa1133530:CDS |
| TGCTTACTTATACTGCCAAT+GGG | 0.542445 | 7_3:+87056392 | None:intergenic |
| AATTTCCTCTGCCAGTACCT+TGG | 0.542921 | 7_3:+87057490 | None:intergenic |
| GCAAGCAAGTTGTAAAGTCA+AGG | 0.543230 | 7_3:-87059172 | Msa1133530:CDS |
| ATTGGAATGCCTATTATCAA+AGG | 0.545628 | 7_3:-87060961 | Msa1133530:CDS |
| TTTCTGCTCCCTCTTTCTGG+TGG | 0.545789 | 7_3:-87058605 | Msa1133530:CDS |
| CAGCTTGATGAAGTTGATAT+GGG | 0.547546 | 7_3:-87055802 | Msa1133530:CDS |
| AGATCAAACCTATTATCCTC+TGG | 0.548297 | 7_3:+87054433 | None:intergenic |
| GGTTTACTGCTTGGAAACAA+AGG | 0.548451 | 7_3:-87060834 | Msa1133530:CDS |
| GGCTCCAGTTCAGCTGTGGG+TGG | 0.548598 | 7_3:+87056296 | None:intergenic |
| CTCCATCAATGCTAACATCA+AGG | 0.548950 | 7_3:+87057456 | None:intergenic |
| CTACTTGCAATCTCAACCAA+TGG | 0.551398 | 7_3:-87061286 | Msa1133530:CDS |
| TCAGAATCTATGTTACAGAT+GGG | 0.553971 | 7_3:-87054722 | Msa1133530:intron |
| GCGAGCCAAGGTACTGGCAG+AGG | 0.554709 | 7_3:-87057495 | Msa1133530:CDS |
| GCAGCTTCATTAGATGGTGT+TGG | 0.556086 | 7_3:-87054298 | Msa1133530:CDS |
| TGACTGTAGTTAGAACGTAT+AGG | 0.558038 | 7_3:+87056275 | None:intergenic |
| GGGAAAGCGACCACGCTACA+AGG | 0.558835 | 7_3:-87057396 | Msa1133530:intron |
| AATCGAATTCCATAGCCCAT+TGG | 0.559414 | 7_3:+87061270 | None:intergenic |
| GAAGTTGAAAATCATCAAGT+TGG | 0.562415 | 7_3:+87060809 | None:intergenic |
| TTCGGGTCCAAGACGGATGA+CGG | 0.562754 | 7_3:+87061196 | None:intergenic |
| GTAATTACAGAGAACTTCGA+TGG | 0.562942 | 7_3:-87060855 | Msa1133530:CDS |
| AGTAATCACCAAGGCTGTGA+TGG | 0.563160 | 7_3:-87059657 | Msa1133530:CDS |
| GCTTCATTAGATGGTGTTGG+TGG | 0.563347 | 7_3:-87054295 | Msa1133530:CDS |
| TATACGTTCTAACTACAGTC+AGG | 0.563485 | 7_3:-87056273 | Msa1133530:intron |
| ATCTCCAAATCCAAACAAGC+CGG | 0.565116 | 7_3:-87061221 | Msa1133530:CDS |
| TATAGGCTCCAGTTCAGCTG+TGG | 0.566047 | 7_3:+87056292 | None:intergenic |
| CCAGGTTTGTTGTGAACCCA+AGG | 0.567416 | 7_3:+87056775 | None:intergenic |
| CATGAGATATACCTGGAACA+TGG | 0.570810 | 7_3:+87055714 | None:intergenic |
| TCTTCGGTCATTCCTGCGAT+GGG | 0.572859 | 7_3:-87056366 | Msa1133530:CDS |
| AATGACAAGGTCGCGAGCCA+AGG | 0.572991 | 7_3:-87057507 | Msa1133530:CDS |
| ATGAAGCTGCCACTGACTCA+TGG | 0.573520 | 7_3:+87054311 | None:intergenic |
| ATTTGGATTGCCTGAACCTG+CGG | 0.574902 | 7_3:+87054258 | None:intergenic |
| AGATGACGATGCAATATGAA+AGG | 0.575590 | 7_3:-87054014 | Msa1133530:three_prime_UTR |
| AGATGAGTAACCAAGATGGC+TGG | 0.577528 | 7_3:+87056340 | None:intergenic |
| TTGTTTATACAGGTAGATGG+TGG | 0.580190 | 7_3:-87056880 | Msa1133530:intron |
| TTTCGAGTTCGGGTCCAAGA+CGG | 0.582536 | 7_3:+87061189 | None:intergenic |
| AAATTGCGAGAGGGTCGGTA+TGG | 0.582929 | 7_3:+87061379 | None:intergenic |
| ATCACCATTAACCACAACAC+TGG | 0.583409 | 7_3:+87059402 | None:intergenic |
| CATACCTCGGCATGATAGGA+AGG | 0.583769 | 7_3:+87054607 | None:intergenic |
| GGAATGGGAGTTGCTGCCGC+AGG | 0.585359 | 7_3:-87054274 | Msa1133530:CDS |
| CATTCAAGCTCGAATCAGAA+TGG | 0.587686 | 7_3:-87056827 | Msa1133530:CDS |
| ATAGGCTCCAGTTCAGCTGT+GGG | 0.591935 | 7_3:+87056293 | None:intergenic |
| AAGATGTGGCTTGCAAATGA+TGG | 0.599672 | 7_3:-87060877 | Msa1133530:CDS |
| CTATATGGTACATCTACTGA+AGG | 0.601918 | 7_3:+87059147 | None:intergenic |
| TAATGCAAGCTCAGCATGAG+GGG | 0.602155 | 7_3:+87059797 | None:intergenic |
| TGGTGTCGAGTTCTAAGAAG+TGG | 0.603974 | 7_3:+87061144 | None:intergenic |
| TAATCCCATAACCAGCAACC+AGG | 0.604169 | 7_3:+87058653 | None:intergenic |
| AGATGGATGTTCCAGTGTTG+TGG | 0.609611 | 7_3:-87059413 | Msa1133530:CDS |
| TGTCTGCTCCACCAGAAAGA+GGG | 0.609748 | 7_3:+87058597 | None:intergenic |
| TTTAATGCAAGCTCAGCATG+AGG | 0.609788 | 7_3:+87059795 | None:intergenic |
| GGAGCTCCAACGTGGATGAA+GGG | 0.610939 | 7_3:-87056735 | Msa1133530:CDS |
| AAAATATCACTCTCCTGAGG+AGG | 0.616399 | 7_3:-87058690 | Msa1133530:CDS |
| TTATGATACGACCCAAGATG+TGG | 0.618671 | 7_3:-87060891 | Msa1133530:CDS |
| TCAGCGGATATAAATCCCAT+TGG | 0.619764 | 7_3:-87056407 | Msa1133530:CDS |
| GAGGAAATAGCATTTGGACC+TGG | 0.620903 | 7_3:-87058671 | Msa1133530:CDS |
| TGTTGGATGCATGTGCCAGA+TGG | 0.622175 | 7_3:-87058555 | Msa1133530:CDS |
| TTGAAGTGGAAATTGCGAGA+GGG | 0.624594 | 7_3:+87061370 | None:intergenic |
| TAACCTTAAGAGGAACAGAA+AGG | 0.625303 | 7_3:+87059094 | None:intergenic |
| ATCAGCAAACCATGAGTCAG+TGG | 0.626159 | 7_3:-87054320 | Msa1133530:CDS |
| GGTTCAGGCAATCCAAATGT+CGG | 0.627370 | 7_3:-87054253 | Msa1133530:CDS |
| TTAATGCAAGCTCAGCATGA+GGG | 0.627773 | 7_3:+87059796 | None:intergenic |
| AATCACCAAGGCTGTGATGG+TGG | 0.627776 | 7_3:-87059654 | Msa1133530:CDS |
| ACGCAACCCTTCATCCACGT+TGG | 0.629155 | 7_3:+87056729 | None:intergenic |
| AAAATTGACTCCATCACAAG+TGG | 0.630195 | 7_3:-87054695 | Msa1133530:CDS |
| GAAGTGTTTATGAATGCAAG+CGG | 0.632138 | 7_3:-87059765 | Msa1133530:CDS |
| ATAGGTGCTACTCATACTCG+TGG | 0.632910 | 7_3:-87059696 | Msa1133530:CDS |
| CATTCTTAGAGCTATTGCAG+TGG | 0.633093 | 7_3:-87059850 | Msa1133530:intron |
| TGCTGAGCTTGCATTAAATG+GGG | 0.634241 | 7_3:-87059790 | Msa1133530:CDS |
| CTTGCAGAGTTATTCACCAG+AGG | 0.641776 | 7_3:-87054449 | Msa1133530:intron |
| AACGTGGATGAAGGGTTGCG+TGG | 0.643125 | 7_3:-87056727 | Msa1133530:CDS |
| CCAAAGATGAGTAACCAAGA+TGG | 0.644012 | 7_3:+87056336 | None:intergenic |
| GGACCCGAACTCGAAATCCC+CGG | 0.648427 | 7_3:-87061182 | Msa1133530:CDS |
| GACACCTTCCTATCATGCCG+AGG | 0.650724 | 7_3:-87054611 | Msa1133530:intron |
| CAGAATCTATGTTACAGATG+GGG | 0.651806 | 7_3:-87054721 | Msa1133530:CDS |
| AATTCAGTCACCTTGTAGCG+TGG | 0.653429 | 7_3:+87057386 | None:intergenic |
| GTTGAAGTGGAAATTGCGAG+AGG | 0.654805 | 7_3:+87061369 | None:intergenic |
| AGTGGAAATTGCGAGAGGGT+CGG | 0.660633 | 7_3:+87061374 | None:intergenic |
| TGTCTTGGGGAGCTCCAACG+TGG | 0.667789 | 7_3:-87056743 | Msa1133530:CDS |
| CCCAATGCCTCAGAAACATG+AGG | 0.670620 | 7_3:+87060784 | None:intergenic |
| AATGCAAGCTCAGCATGAGG+GGG | 0.672892 | 7_3:+87059798 | None:intergenic |
| GGCATGATAGGAAGGTGTCA+AGG | 0.674042 | 7_3:+87054615 | None:intergenic |
| GATAAAATATCACTCTCCTG+AGG | 0.674234 | 7_3:-87058693 | Msa1133530:CDS |
| CATTCATAATAATCACGATG+AGG | 0.676220 | 7_3:-87061322 | Msa1133530:exon |
| ATGTGCCAGATGGTCGTGAA+AGG | 0.676922 | 7_3:-87058545 | Msa1133530:intron |
| GTTGCAGTTCGGAAATGACA+AGG | 0.688965 | 7_3:-87057520 | Msa1133530:intron |
| ACATGGAAACTGGACCACAA+CGG | 0.692287 | 7_3:+87055731 | None:intergenic |
| CCCAAGACAAGATAAAACCC+AGG | 0.699587 | 7_3:+87056757 | None:intergenic |
| ACAGTATGATTGCAGCTCAG+CGG | 0.700171 | 7_3:-87056423 | Msa1133530:intron |
| TCCAACAATCGCAGCAACAG+AGG | 0.708792 | 7_3:+87058571 | None:intergenic |
| AATGCCTCAGAAACATGAGG+AGG | 0.716948 | 7_3:+87060787 | None:intergenic |
| GGTGCTACTCATACTCGTGG+AGG | 0.717392 | 7_3:-87059693 | Msa1133530:CDS |
| ATGATAGGAAGGTGTCAAGG+TGG | 0.717838 | 7_3:+87054618 | None:intergenic |
| TGCTCAGATAGATCTTGACG+TGG | 0.724663 | 7_3:-87059329 | Msa1133530:intron |
| GTTGCGTGGCTACTTGACGA+AGG | 0.727374 | 7_3:-87056713 | Msa1133530:intron |
| TATATGTACAGTAATCACCA+AGG | 0.733738 | 7_3:-87059666 | Msa1133530:CDS |
| GGTCTTCACAGCCATAACCG+GGG | 0.753301 | 7_3:+87061165 | None:intergenic |
| TGATATGGGAATGACTTACG+AGG | 0.757080 | 7_3:-87055788 | Msa1133530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATTTTTCATATTAAAA+TGG | - | chr7_3:87059678-87059697 | Msa1133530:CDS | 10.0% |
| !! | AAATTAAAAAAAAAAAGGTT+AGG | + | chr7_3:87060567-87060586 | None:intergenic | 10.0% |
| !!! | TACTTTATTTTGTTTTATTA+GGG | + | chr7_3:87061109-87061128 | None:intergenic | 10.0% |
| !!! | TTACTTTATTTTGTTTTATT+AGG | + | chr7_3:87061110-87061129 | None:intergenic | 10.0% |
| !!! | TTGTTATAGAAATTTTGTAT+TGG | + | chr7_3:87054938-87054957 | None:intergenic | 15.0% |
| !! | TTTCTATTATTATTGTTTGA+CGG | - | chr7_3:87055184-87055203 | Msa1133530:intron | 15.0% |
| !! | TGTTTAAATGTCAATTATAT+AGG | - | chr7_3:87055830-87055849 | Msa1133530:intron | 15.0% |
| !! | AACATCATTTAAAGAAAATT+GGG | + | chr7_3:87055955-87055974 | None:intergenic | 15.0% |
| !!! | CATATAAAGATTAAAACTTT+TGG | + | chr7_3:87056376-87056395 | None:intergenic | 15.0% |
| !! | ATTATTGTGTATACTATTAT+AGG | - | chr7_3:87056884-87056903 | Msa1133530:intron | 15.0% |
| !! | TTGGATTGAAAAAATATTAA+CGG | + | chr7_3:87057557-87057576 | None:intergenic | 15.0% |
| !! | ATGTTGATATTAATGAAAAA+TGG | - | chr7_3:87058046-87058065 | Msa1133530:intron | 15.0% |
| !!! | TTTATTTTCACTTTGTTTTT+TGG | - | chr7_3:87058711-87058730 | Msa1133530:intron | 15.0% |
| !! | GATCAAAAATATATTACTAA+TGG | + | chr7_3:87059448-87059467 | None:intergenic | 15.0% |
| !! | ATGGCAAATTAAAAAAAAAA+AGG | + | chr7_3:87060572-87060591 | None:intergenic | 15.0% |
| !!! | ACTTTATTTTGTTTTATTAG+GGG | + | chr7_3:87061108-87061127 | None:intergenic | 15.0% |
| !! | TGTTTGAAAGAAATATTGAT+TGG | - | chr7_3:87054303-87054322 | Msa1133530:CDS | 20.0% |
| !! | TTAAACTAAAAAAGTTAGTG+CGG | + | chr7_3:87054827-87054846 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTACATTATGTCA+TGG | + | chr7_3:87055048-87055067 | None:intergenic | 20.0% |
| !! | TGACATAATGTAAAAAGAAA+TGG | - | chr7_3:87055048-87055067 | Msa1133530:intron | 20.0% |
| !!! | ATGTGTTTCATTTATGTTTT+TGG | - | chr7_3:87055384-87055403 | Msa1133530:intron | 20.0% |
| !!! | TGTGTTTCATTTATGTTTTT+GGG | - | chr7_3:87055385-87055404 | Msa1133530:intron | 20.0% |
| !! | GGAAAATAAATATCCTTATA+CGG | + | chr7_3:87055802-87055821 | None:intergenic | 20.0% |
| !! | TGACATTTAAACAATCTAAA+TGG | + | chr7_3:87055823-87055842 | None:intergenic | 20.0% |
| !! | CAACATCATTTAAAGAAAAT+TGG | + | chr7_3:87055956-87055975 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAAATGATGTTG+AGG | - | chr7_3:87055956-87055975 | Msa1133530:intron | 20.0% |
| !!! | ATTTTGACCATAAACATTAA+AGG | - | chr7_3:87056051-87056070 | Msa1133530:intron | 20.0% |
| !! | TGTAAATCCTTTAATGTTTA+TGG | + | chr7_3:87056061-87056080 | None:intergenic | 20.0% |
| !! | AATTGTAAATGAAAGAGAAA+AGG | + | chr7_3:87057184-87057203 | None:intergenic | 20.0% |
| !!! | AGTATTTTATACTGTGTTTA+TGG | - | chr7_3:87057405-87057424 | Msa1133530:CDS | 20.0% |
| !!! | GTATTTTATACTGTGTTTAT+GGG | - | chr7_3:87057406-87057425 | Msa1133530:CDS | 20.0% |
| !!! | ATATGTTATTTGAAATCAAC+TGG | - | chr7_3:87057727-87057746 | Msa1133530:intron | 20.0% |
| !! | ATGTTAAAAGAAATACTGAA+GGG | - | chr7_3:87058199-87058218 | Msa1133530:intron | 20.0% |
| !! | CATACAAAAAATATCATTTG+AGG | + | chr7_3:87058412-87058431 | None:intergenic | 20.0% |
| !!! | TTGTATGATTTTGTTTATAC+AGG | - | chr7_3:87058425-87058444 | Msa1133530:intron | 20.0% |
| !!! | TTAGATTACACGTTTTTATA+GGG | - | chr7_3:87058640-87058659 | Msa1133530:CDS | 20.0% |
| !!! | ACATAAATTTTGTCTTCAAA+TGG | - | chr7_3:87058810-87058829 | Msa1133530:intron | 20.0% |
| !! | AACTAATAGATACTGTTAAA+GGG | + | chr7_3:87059359-87059378 | None:intergenic | 20.0% |
| !! | AAACTAATAGATACTGTTAA+AGG | + | chr7_3:87059360-87059379 | None:intergenic | 20.0% |
| !!! | TAACAGTATCTATTAGTTTT+TGG | - | chr7_3:87059361-87059380 | Msa1133530:CDS | 20.0% |
| !! | CAAAAAAATAAAAAATACCC+AGG | + | chr7_3:87059422-87059441 | None:intergenic | 20.0% |
| !! | TTTCATATTAAAATGGTTGA+AGG | - | chr7_3:87059685-87059704 | Msa1133530:CDS | 20.0% |
| !!! | TACTGATATTGAACTTATTT+TGG | + | chr7_3:87059903-87059922 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTCAAAAAAGC+AGG | + | chr7_3:87060244-87060263 | None:intergenic | 20.0% |
| !!! | TGCTTTTTTGAAAATAAAAG+AGG | - | chr7_3:87060243-87060262 | Msa1133530:intron | 20.0% |
| !!! | AGTTAGCATTTTTTTTCTTT+AGG | - | chr7_3:87060321-87060340 | Msa1133530:intron | 20.0% |
| !! | TCAAGTATTATTCGATAAAT+CGG | - | chr7_3:87060664-87060683 | Msa1133530:intron | 20.0% |
| !! | ATCTTGCATTATAAAGAAAT+TGG | + | chr7_3:87060911-87060930 | None:intergenic | 20.0% |
| !! | AATTTCTTTATAATGCAAGA+TGG | - | chr7_3:87060910-87060929 | Msa1133530:CDS | 20.0% |
| !! | TGGAATCTATATATTTGTTT+GGG | + | chr7_3:87061168-87061187 | None:intergenic | 20.0% |
| !! | ATGGAATCTATATATTTGTT+TGG | + | chr7_3:87061169-87061188 | None:intergenic | 20.0% |
| !! | GTCTTATGCTAAAAAATTTA+TGG | - | chr7_3:87061382-87061401 | Msa1133530:five_prime_UTR | 20.0% |
| !! | AAGAAATATTGATTGGTGAT+TGG | - | chr7_3:87054310-87054329 | Msa1133530:CDS | 25.0% |
| ! | TTAACAAAACCATAACCAAA+TGG | + | chr7_3:87054570-87054589 | None:intergenic | 25.0% |
| ! | ACAAAAATAACGTGTGAATA+TGG | + | chr7_3:87054612-87054631 | None:intergenic | 25.0% |
| ! | GTAATTTCTCAAATCATTAC+TGG | + | chr7_3:87054709-87054728 | None:intergenic | 25.0% |
| ! | TTTCTATAACAAGTGTCATA+AGG | - | chr7_3:87054946-87054965 | Msa1133530:intron | 25.0% |
| ! | TTCTATAACAAGTGTCATAA+GGG | - | chr7_3:87054947-87054966 | Msa1133530:intron | 25.0% |
| !!! | TTGTGTCATATTTTAACCTA+GGG | + | chr7_3:87054988-87055007 | None:intergenic | 25.0% |
| !!! | ATTGTGTCATATTTTAACCT+AGG | + | chr7_3:87054989-87055008 | None:intergenic | 25.0% |
| !!! | GTGTTTCATTTATGTTTTTG+GGG | - | chr7_3:87055386-87055405 | Msa1133530:intron | 25.0% |
| ! | ATAAACATCTGAGTATAAGT+TGG | + | chr7_3:87055416-87055435 | None:intergenic | 25.0% |
| !! | ATATTTTCCTACCATAGTAA+AGG | + | chr7_3:87055690-87055709 | None:intergenic | 25.0% |
| ! | TAAATGTGAAAAAAGACGAA+CGG | + | chr7_3:87055729-87055748 | None:intergenic | 25.0% |
| ! | TTTAATATCCATTGTGTGTT+TGG | - | chr7_3:87055745-87055764 | Msa1133530:CDS | 25.0% |
| ! | TTAATATCCATTGTGTGTTT+GGG | - | chr7_3:87055746-87055765 | Msa1133530:CDS | 25.0% |
| ! | TTCATTTCATTTGTAACAGA+TGG | - | chr7_3:87055885-87055904 | Msa1133530:intron | 25.0% |
| ! | TTAAAGGATTTACATCAGAT+TGG | - | chr7_3:87056067-87056086 | Msa1133530:intron | 25.0% |
| !! | CTAAACATTATGAGCTTTAA+AGG | - | chr7_3:87056279-87056298 | Msa1133530:CDS | 25.0% |
| !!! | AATACTCTTTTAAGGGAATA+CGG | + | chr7_3:87056330-87056349 | None:intergenic | 25.0% |
| !!! | TATTCCCTTAAAAGAGTATT+TGG | - | chr7_3:87056330-87056349 | Msa1133530:CDS | 25.0% |
| ! | TTTGGTGAAAAATAAAACCT+TGG | + | chr7_3:87056358-87056377 | None:intergenic | 25.0% |
| ! | AATCTTTATATGTGCTTGTT+TGG | - | chr7_3:87056384-87056403 | Msa1133530:CDS | 25.0% |
| ! | AAAATTTAGAAGCTGCTATT+TGG | - | chr7_3:87056464-87056483 | Msa1133530:intron | 25.0% |
| ! | GAAAGGAAATATAAACATTC+AGG | + | chr7_3:87057027-87057046 | None:intergenic | 25.0% |
| !! | TCATTTACAATTTTTGAACG+TGG | - | chr7_3:87057192-87057211 | Msa1133530:intron | 25.0% |
| ! | TTAATGATATCCAAACTACA+AGG | + | chr7_3:87057261-87057280 | None:intergenic | 25.0% |
| !! | CACAGTATAAAATACTCTTT+TGG | + | chr7_3:87057401-87057420 | None:intergenic | 25.0% |
| !! | TTCTAGTGTTTTACAATCAT+TGG | - | chr7_3:87057460-87057479 | Msa1133530:CDS | 25.0% |
| !!! | TATCATTGATGAAGTATTGA+AGG | + | chr7_3:87057520-87057539 | None:intergenic | 25.0% |
| !!! | TTCAATCCAATGTGTTTTAA+TGG | - | chr7_3:87057567-87057586 | Msa1133530:intron | 25.0% |
| !!! | TCAATCCAATGTGTTTTAAT+GGG | - | chr7_3:87057568-87057587 | Msa1133530:intron | 25.0% |
| ! | CAAAATAAAAGGATTTCTTC+AGG | + | chr7_3:87057670-87057689 | None:intergenic | 25.0% |
| ! | AAACTGATCGACAAAATAAA+AGG | + | chr7_3:87057681-87057700 | None:intergenic | 25.0% |
| !! | TGTTTGAAACAAAGACAAAA+GGG | + | chr7_3:87057894-87057913 | None:intergenic | 25.0% |
| ! | TCATTAATATCAACATACTC+CGG | + | chr7_3:87058042-87058061 | None:intergenic | 25.0% |
| ! | GATGTTAAAAGAAATACTGA+AGG | - | chr7_3:87058198-87058217 | Msa1133530:intron | 25.0% |
| ! | AACACAAAGGAAAATACAAT+AGG | + | chr7_3:87058251-87058270 | None:intergenic | 25.0% |
| !!! | CTGTTATTTCATAAACACAA+AGG | + | chr7_3:87058264-87058283 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTATACAGGTAGA+TGG | - | chr7_3:87058432-87058451 | Msa1133530:intron | 25.0% |
| !! | GTTAGATTACACGTTTTTAT+AGG | - | chr7_3:87058639-87058658 | Msa1133530:CDS | 25.0% |
| !! | TAGATTACACGTTTTTATAG+GGG | - | chr7_3:87058641-87058660 | Msa1133530:CDS | 25.0% |
| !! | GAAGTCAAGACATTTTTAAA+AGG | + | chr7_3:87059252-87059271 | None:intergenic | 25.0% |
| ! | ACAAAAACGACAAAAATCAA+GGG | + | chr7_3:87059662-87059681 | None:intergenic | 25.0% |
| ! | TACAAAAACGACAAAAATCA+AGG | + | chr7_3:87059663-87059682 | None:intergenic | 25.0% |
| ! | TCACAATATCAATCTTTGTT+AGG | - | chr7_3:87059746-87059765 | Msa1133530:CDS | 25.0% |
| !!! | TATTGACTCATTTTTTCTGT+TGG | - | chr7_3:87059926-87059945 | Msa1133530:intron | 25.0% |
| ! | TGATTAACAAAAGACACATT+TGG | + | chr7_3:87060043-87060062 | None:intergenic | 25.0% |
| !! | GTGTCTTTTGTTAATCATTT+TGG | - | chr7_3:87060046-87060065 | Msa1133530:intron | 25.0% |
| ! | ATGTCTTACGTTAATCAATT+TGG | - | chr7_3:87060078-87060097 | Msa1133530:intron | 25.0% |
| !! | CTCTTTTGCTAGTAATATTA+TGG | + | chr7_3:87060105-87060124 | None:intergenic | 25.0% |
| ! | TTCAATATATAGACAAGATC+TGG | + | chr7_3:87060184-87060203 | None:intergenic | 25.0% |
| ! | TTGTCTATATATTGAACAGA+CGG | - | chr7_3:87060188-87060207 | Msa1133530:intron | 25.0% |
| ! | AAGGCTATTTATCTGAAAAA+TGG | - | chr7_3:87060293-87060312 | Msa1133530:intron | 25.0% |
| ! | AAATCAATCTAATGTGACTT+AGG | + | chr7_3:87060424-87060443 | None:intergenic | 25.0% |
| !! | AGTTCTTATGATTTAAAGTC+AGG | - | chr7_3:87060732-87060751 | Msa1133530:intron | 25.0% |
| !! | GTTCTTATGATTTAAAGTCA+GGG | - | chr7_3:87060733-87060752 | Msa1133530:intron | 25.0% |
| !!! | TTATTTTGTTTTATTAGGGG+AGG | + | chr7_3:87061105-87061124 | None:intergenic | 25.0% |
| ! | CATAGTGTGCTATAAAAATA+TGG | + | chr7_3:87061188-87061207 | None:intergenic | 25.0% |
| !!! | AATGTTTTTACACTACACAT+GGG | + | chr7_3:87061234-87061253 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTACACTACACA+TGG | + | chr7_3:87061235-87061254 | None:intergenic | 25.0% |
| ! | TGCTAAAAAATTTATGGTGA+AGG | - | chr7_3:87061388-87061407 | Msa1133530:five_prime_UTR | 25.0% |
| CATTCATAATAATCACGATG+AGG | - | chr7_3:87053993-87054012 | Msa1133530:three_prime_UTR | 30.0% | |
| GAGTTATTACGAATGGTTAA+TGG | + | chr7_3:87054194-87054213 | None:intergenic | 30.0% | |
| AAAGAGAGAGTTATTACGAA+TGG | + | chr7_3:87054201-87054220 | None:intergenic | 30.0% | |
| ! | TCAGTTTTTGTCACTGAAAT+TGG | - | chr7_3:87054259-87054278 | Msa1133530:CDS | 30.0% |
| GATAACATAGTGTGTAGTAT+TGG | - | chr7_3:87054336-87054355 | Msa1133530:CDS | 30.0% | |
| ATTGGAATGCCTATTATCAA+AGG | - | chr7_3:87054354-87054373 | Msa1133530:CDS | 30.0% | |
| GAAGTTGAAAATCATCAAGT+TGG | + | chr7_3:87054509-87054528 | None:intergenic | 30.0% | |
| AAATCAGTTCCATTTGGTTA+TGG | - | chr7_3:87054558-87054577 | Msa1133530:intron | 30.0% | |
| TTACAAGTGTCAATGTCATT+TGG | - | chr7_3:87054725-87054744 | Msa1133530:intron | 30.0% | |
| TTGAAGGAAAATTTGAGCAT+CGG | + | chr7_3:87054754-87054773 | None:intergenic | 30.0% | |
| ! | ATGCTCAAATTTTCCTTCAA+CGG | - | chr7_3:87054754-87054773 | Msa1133530:intron | 30.0% |
| ! | TAGTTTAAGAGCACATGTTA+AGG | - | chr7_3:87054839-87054858 | Msa1133530:intron | 30.0% |
| TGTAAAAAGAAATGGTACAC+TGG | - | chr7_3:87055056-87055075 | Msa1133530:intron | 30.0% | |
| !!! | GTATTTTGTTTTGCTATCTC+TGG | + | chr7_3:87055094-87055113 | None:intergenic | 30.0% |
| ATAATAGAAAAAGAGAGCCA+GGG | + | chr7_3:87055174-87055193 | None:intergenic | 30.0% | |
| AATAATAGAAAAAGAGAGCC+AGG | + | chr7_3:87055175-87055194 | None:intergenic | 30.0% | |
| ATAGTTTGAACACACTACTT+AGG | + | chr7_3:87055355-87055374 | None:intergenic | 30.0% | |
| TATATGTACAGTAATCACCA+AGG | - | chr7_3:87055649-87055668 | Msa1133530:intron | 30.0% | |
| TTTAAATGATGTTGAGGTTG+TGG | - | chr7_3:87055962-87055981 | Msa1133530:intron | 30.0% | |
| GCATTGCAAGCATTTAAATA+TGG | + | chr7_3:87056025-87056044 | None:intergenic | 30.0% | |
| AAAGGAAGACAAAGACTATA+TGG | + | chr7_3:87056186-87056205 | None:intergenic | 30.0% | |
| GACAATAAACTAACCTTAAG+AGG | + | chr7_3:87056234-87056253 | None:intergenic | 30.0% | |
| ! | TTTTCACAATTTCACTGCTT+TGG | + | chr7_3:87056448-87056467 | None:intergenic | 30.0% |
| ! | AAATCAATAAAGTGCTTGTG+TGG | + | chr7_3:87056534-87056553 | None:intergenic | 30.0% |
| TGTTACTGCTGAAATTAATC+AGG | - | chr7_3:87056559-87056578 | Msa1133530:intron | 30.0% | |
| CATGTTTCAACTTAGTAACT+TGG | + | chr7_3:87056588-87056607 | None:intergenic | 30.0% | |
| !! | CTTCTTTGAGATCTTTATAG+TGG | + | chr7_3:87056946-87056965 | None:intergenic | 30.0% |
| ! | CTCAAAGAAGATTAGTTAAG+AGG | - | chr7_3:87056956-87056975 | Msa1133530:intron | 30.0% |
| !! | TTTTGCAAGACTTTTGAGAA+AGG | + | chr7_3:87057044-87057063 | None:intergenic | 30.0% |
| TTTCTGTAAGAAGTAAAGCA+CGG | + | chr7_3:87057106-87057125 | None:intergenic | 30.0% | |
| AAAACTGAGTTGTGTAATCA+TGG | - | chr7_3:87057124-87057143 | Msa1133530:intron | 30.0% | |
| TAAATGAAAGAGAAAAGGAG+AGG | + | chr7_3:87057179-87057198 | None:intergenic | 30.0% | |
| TTTCCTTCAGAAATTGCAAA+TGG | - | chr7_3:87057295-87057314 | Msa1133530:intron | 30.0% | |
| TTCCTTCAGAAATTGCAAAT+GGG | - | chr7_3:87057296-87057315 | Msa1133530:intron | 30.0% | |
| AAGTTAAAGCTGATGCAATA+CGG | - | chr7_3:87057326-87057345 | Msa1133530:intron | 30.0% | |
| GTCTATCTAAGTTTCCATAT+CGG | - | chr7_3:87057487-87057506 | Msa1133530:CDS | 30.0% | |
| !!! | CAATCCAATGTGTTTTAATG+GGG | - | chr7_3:87057569-87057588 | Msa1133530:intron | 30.0% |
| AAAACCCTCTTTAGATGTTA+TGG | - | chr7_3:87057754-87057773 | Msa1133530:intron | 30.0% | |
| ! | GTGTTTGAAACAAAGACAAA+AGG | + | chr7_3:87057895-87057914 | None:intergenic | 30.0% |
| ! | GTCTTTGTTTCAAACACTTA+CGG | - | chr7_3:87057898-87057917 | Msa1133530:CDS | 30.0% |
| ! | TCTTTGTTTCAAACACTTAC+GGG | - | chr7_3:87057899-87057918 | Msa1133530:CDS | 30.0% |
| ! | ATCAAATATCCACAGACTTT+TGG | + | chr7_3:87058181-87058200 | None:intergenic | 30.0% |
| AGAAGAAAACAGAGCAATAA+TGG | + | chr7_3:87058297-87058316 | None:intergenic | 30.0% | |
| ACATGAACTTAATCTTAGTC+CGG | + | chr7_3:87058355-87058374 | None:intergenic | 30.0% | |
| GACCTATAGTTGAACTTATA+GGG | - | chr7_3:87058663-87058682 | Msa1133530:CDS | 30.0% | |
| TACCCTATAAGTTCAACTAT+AGG | + | chr7_3:87058668-87058687 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTGGCTGAATCTA+TGG | - | chr7_3:87058723-87058742 | Msa1133530:intron | 30.0% |
| CACAATAATGAGAAACTAAG+TGG | + | chr7_3:87058836-87058855 | None:intergenic | 30.0% | |
| CACTTAGTTTCTCATTATTG+TGG | - | chr7_3:87058834-87058853 | Msa1133530:intron | 30.0% | |
| !! | TTTTCTGGCAATCTGTTATA+AGG | - | chr7_3:87059286-87059305 | Msa1133530:intron | 30.0% |
| ! | TTTCTGGCAATCTGTTATAA+GGG | - | chr7_3:87059287-87059306 | Msa1133530:intron | 30.0% |
| !! | TTGTGTATTTGACTTTTCAG+TGG | - | chr7_3:87059387-87059406 | Msa1133530:CDS | 30.0% |
| AAAGAAGTCAATAGATAGGA+TGG | + | chr7_3:87059632-87059651 | None:intergenic | 30.0% | |
| GGTTAAAGAAGTCAATAGAT+AGG | + | chr7_3:87059636-87059655 | None:intergenic | 30.0% | |
| CAAAGATTGATATTGTGAGA+TGG | + | chr7_3:87059744-87059763 | None:intergenic | 30.0% | |
| !!! | AAATTGGTTTTATTGTTCGC+TGG | - | chr7_3:87059867-87059886 | Msa1133530:intron | 30.0% |
| ATTAACGTAAGACATATTCG+AGG | + | chr7_3:87060073-87060092 | None:intergenic | 30.0% | |
| CTGTAGAAGCTTGTAATTTA+AGG | - | chr7_3:87060520-87060539 | Msa1133530:intron | 30.0% | |
| TCAGAATCTATGTTACAGAT+GGG | - | chr7_3:87060593-87060612 | Msa1133530:intron | 30.0% | |
| ATCATAAGAACTACATACCT+CGG | + | chr7_3:87060724-87060743 | None:intergenic | 30.0% | |
| ! | TCGATTTTCCGAAATTGATA+CGG | + | chr7_3:87060936-87060955 | None:intergenic | 30.0% |
| TTCAATTAGATTCCGACATT+TGG | + | chr7_3:87061077-87061096 | None:intergenic | 30.0% | |
| CTATAACAAACTGAACTTGT+TGG | - | chr7_3:87061346-87061365 | Msa1133530:five_prime_UTR | 30.0% | |
| TCTACGAAGTTACTCAATCT+AGG | + | chr7_3:87053898-87053917 | None:intergenic | 35.0% | |
| TACTTGCAATCTCAACCAAT+GGG | - | chr7_3:87054030-87054049 | Msa1133530:three_prime_UTR | 35.0% | |
| !! | GTCTTTGATTTGGAGAAGAT+TGG | + | chr7_3:87054071-87054090 | None:intergenic | 35.0% |
| AACCTGACAATTGTATCTCT+CGG | + | chr7_3:87054382-87054401 | None:intergenic | 35.0% | |
| GTAATTACAGAGAACTTCGA+TGG | - | chr7_3:87054460-87054479 | Msa1133530:intron | 35.0% | |
| GTTTACTGCTTGGAAACAAA+GGG | - | chr7_3:87054482-87054501 | Msa1133530:intron | 35.0% | |
| GGACAAAAATCAGTTCCATT+TGG | - | chr7_3:87054552-87054571 | Msa1133530:intron | 35.0% | |
| !! | TGTTGGTGATATGTAGTGTT+TGG | - | chr7_3:87054780-87054799 | Msa1133530:intron | 35.0% |
| !! | GTTGGTGATATGTAGTGTTT+GGG | - | chr7_3:87054781-87054800 | Msa1133530:intron | 35.0% |
| ! | GGCTGAGTTGAATTATTTGT+TGG | - | chr7_3:87055227-87055246 | Msa1133530:intron | 35.0% |
| TTAGAATGCATGAGCGTAAA+AGG | + | chr7_3:87055262-87055281 | None:intergenic | 35.0% | |
| !! | ACTGCAATAGCTCTAAGAAT+GGG | + | chr7_3:87055466-87055485 | None:intergenic | 35.0% |
| ATGCTGAGCTTGCATTAAAT+GGG | - | chr7_3:87055524-87055543 | Msa1133530:intron | 35.0% | |
| ! | GAAGTGTTTATGAATGCAAG+CGG | - | chr7_3:87055550-87055569 | Msa1133530:intron | 35.0% |
| ! | CATCAAGCTTTCTAAGTTGA+TGG | + | chr7_3:87055582-87055601 | None:intergenic | 35.0% |
| ACATTCAGGAAATCCGTATA+AGG | - | chr7_3:87055786-87055805 | Msa1133530:CDS | 35.0% | |
| AGCTACTTAAAGATCCTCTA+AGG | + | chr7_3:87056116-87056135 | None:intergenic | 35.0% | |
| CTATATGGTACATCTACTGA+AGG | + | chr7_3:87056171-87056190 | None:intergenic | 35.0% | |
| !!! | AGGCGTATTTTAAGGTCAAA+AGG | + | chr7_3:87056204-87056223 | None:intergenic | 35.0% |
| !! | GAACAGAAAGGCGTATTTTA+AGG | + | chr7_3:87056212-87056231 | None:intergenic | 35.0% |
| TAACCTTAAGAGGAACAGAA+AGG | + | chr7_3:87056224-87056243 | None:intergenic | 35.0% | |
| TTAAGGGAATACGGTATTCA+TGG | + | chr7_3:87056321-87056340 | None:intergenic | 35.0% | |
| ! | GGAGCCAAATACTCTTTTAA+GGG | + | chr7_3:87056337-87056356 | None:intergenic | 35.0% |
| ! | TGGAGCCAAATACTCTTTTA+AGG | + | chr7_3:87056338-87056357 | None:intergenic | 35.0% |
| !! | TAAAAGAGTATTTGGCTCCA+AGG | - | chr7_3:87056338-87056357 | Msa1133530:CDS | 35.0% |
| AAATGTGCGACAAAAAGTCA+CGG | + | chr7_3:87056503-87056522 | None:intergenic | 35.0% | |
| GTTTCAACTTAGTAACTTGG+AGG | + | chr7_3:87056585-87056604 | None:intergenic | 35.0% | |
| GATAAAATATCACTCTCCTG+AGG | - | chr7_3:87056622-87056641 | Msa1133530:intron | 35.0% | |
| TGGGATTATTTACGAAGAAG+TGG | - | chr7_3:87056677-87056696 | Msa1133530:intron | 35.0% | |
| AATGACAACTGCAGTTAGAT+TGG | - | chr7_3:87056806-87056825 | Msa1133530:CDS | 35.0% | |
| TCTCCAATTAATTCAGCTGT+CGG | + | chr7_3:87056998-87057017 | None:intergenic | 35.0% | |
| GATATCCAAACTACAAGGTT+CGG | + | chr7_3:87057256-87057275 | None:intergenic | 35.0% | |
| TCCTTCAGAAATTGCAAATG+GGG | - | chr7_3:87057297-87057316 | Msa1133530:intron | 35.0% | |
| ! | CGGATTGGAAACTATATAGA+TGG | - | chr7_3:87057346-87057365 | Msa1133530:intron | 35.0% |
| TGTTTATGGGATCTGAAAAC+AGG | - | chr7_3:87057419-87057438 | Msa1133530:CDS | 35.0% | |
| TTGAAGGAATATAGCCGATA+TGG | + | chr7_3:87057504-87057523 | None:intergenic | 35.0% | |
| TCAACCCCATTAAAACACAT+TGG | + | chr7_3:87057576-87057595 | None:intergenic | 35.0% | |
| TGCACCATAACATCTAAAGA+GGG | + | chr7_3:87057761-87057780 | None:intergenic | 35.0% | |
| TTAATATCAACATACTCCGG+TGG | + | chr7_3:87058039-87058058 | None:intergenic | 35.0% | |
| !!! | TATCCACAGACTTTTGGTTT+GGG | + | chr7_3:87058175-87058194 | None:intergenic | 35.0% |
| !! | ATATCCACAGACTTTTGGTT+TGG | + | chr7_3:87058176-87058195 | None:intergenic | 35.0% |
| TTGTTTATACAGGTAGATGG+TGG | - | chr7_3:87058435-87058454 | Msa1133530:intron | 35.0% | |
| GGACCTATAGTTGAACTTAT+AGG | - | chr7_3:87058662-87058681 | Msa1133530:CDS | 35.0% | |
| !! | GCGACATGTTTTGAACTTAT+AGG | + | chr7_3:87058691-87058710 | None:intergenic | 35.0% |
| TGCTTACTTATACTGCCAAT+GGG | + | chr7_3:87058926-87058945 | None:intergenic | 35.0% | |
| GTATAAGTAAGCAGGATCTT+CGG | - | chr7_3:87058933-87058952 | Msa1133530:intron | 35.0% | |
| TGACTGTAGTTAGAACGTAT+AGG | + | chr7_3:87059043-87059062 | None:intergenic | 35.0% | |
| TATACGTTCTAACTACAGTC+AGG | - | chr7_3:87059042-87059061 | Msa1133530:intron | 35.0% | |
| ! | TTACACTTTTCAGTACTCAC+CGG | - | chr7_3:87059080-87059099 | Msa1133530:intron | 35.0% |
| TCATTGAGATGTTTCAAGAC+CGG | + | chr7_3:87059102-87059121 | None:intergenic | 35.0% | |
| CCAACACATATGCAAATGAA+AGG | + | chr7_3:87059127-87059146 | None:intergenic | 35.0% | |
| CCTTTCATTTGCATATGTGT+TGG | - | chr7_3:87059124-87059143 | Msa1133530:CDS | 35.0% | |
| ! | ATGTGTTGGCATACTGTATT+TGG | - | chr7_3:87059138-87059157 | Msa1133530:CDS | 35.0% |
| ! | TGTGTTGGCATACTGTATTT+GGG | - | chr7_3:87059139-87059158 | Msa1133530:CDS | 35.0% |
| GTCTATGCTACAATGTTAGA+TGG | - | chr7_3:87059173-87059192 | Msa1133530:CDS | 35.0% | |
| ! | CTATCTATCCAGACATTTTC+TGG | - | chr7_3:87059271-87059290 | Msa1133530:intron | 35.0% |
| !! | TGTTATAAGGGTGATGGTTT+TGG | - | chr7_3:87059299-87059318 | Msa1133530:intron | 35.0% |
| !! | GTTATAAGGGTGATGGTTTT+GGG | - | chr7_3:87059300-87059319 | Msa1133530:intron | 35.0% |
| AAAAAATACCCAGGAGAACA+AGG | + | chr7_3:87059413-87059432 | None:intergenic | 35.0% | |
| !! | CAGCTTGATGAAGTTGATAT+GGG | - | chr7_3:87059513-87059532 | Msa1133530:intron | 35.0% |
| TACGAGGAACTATCTGTTTA+TGG | - | chr7_3:87059543-87059562 | Msa1133530:intron | 35.0% | |
| AACGACAAAAATCAAGGGAA+AGG | + | chr7_3:87059657-87059676 | None:intergenic | 35.0% | |
| GCATCATTCTTCATTGTATC+TGG | + | chr7_3:87059772-87059791 | None:intergenic | 35.0% | |
| TTATAGGCTTATAGCCTATG+GGG | + | chr7_3:87059813-87059832 | None:intergenic | 35.0% | |
| GTTATAGGCTTATAGCCTAT+GGG | + | chr7_3:87059814-87059833 | None:intergenic | 35.0% | |
| AGTTATAGGCTTATAGCCTA+TGG | + | chr7_3:87059815-87059834 | None:intergenic | 35.0% | |
| CATGCAGGTAAGTTAGTTAT+AGG | + | chr7_3:87059829-87059848 | None:intergenic | 35.0% | |
| ATTTGACAGGTCGATGAAAT+TGG | - | chr7_3:87059851-87059870 | Msa1133530:intron | 35.0% | |
| TGGACGTATCAACATTACAA+AGG | - | chr7_3:87060013-87060032 | Msa1133530:intron | 35.0% | |
| TACTAGCAAAAGAGACACTT+AGG | - | chr7_3:87060111-87060130 | Msa1133530:intron | 35.0% | |
| ACTAGCAAAAGAGACACTTA+GGG | - | chr7_3:87060112-87060131 | Msa1133530:intron | 35.0% | |
| !! | GTGTTTTTACAGACAGTTGT+AGG | + | chr7_3:87060157-87060176 | None:intergenic | 35.0% |
| !! | AGCAGGTAAAGTTTTGTAAC+TGG | + | chr7_3:87060227-87060246 | None:intergenic | 35.0% |
| TTGCAATAAAAGCTCACACA+AGG | + | chr7_3:87060273-87060292 | None:intergenic | 35.0% | |
| ! | GTGTGAGCTTTTATTGCAAA+AGG | - | chr7_3:87060274-87060293 | Msa1133530:intron | 35.0% |
| CTAATGTGACTTAGGATACA+TGG | + | chr7_3:87060416-87060435 | None:intergenic | 35.0% | |
| ! | TGCCATGTTTTCAATCGATA+CGG | - | chr7_3:87060450-87060469 | Msa1133530:intron | 35.0% |
| GTTAGGACTGAACTTAAAGA+TGG | + | chr7_3:87060550-87060569 | None:intergenic | 35.0% | |
| ! | CTGTAACATAGATTCTGAGA+TGG | + | chr7_3:87060591-87060610 | None:intergenic | 35.0% |
| CTCAGAATCTATGTTACAGA+TGG | - | chr7_3:87060592-87060611 | Msa1133530:intron | 35.0% | |
| CAGAATCTATGTTACAGATG+GGG | - | chr7_3:87060594-87060613 | Msa1133530:intron | 35.0% | |
| ! | AAAATTGACTCCATCACAAG+TGG | - | chr7_3:87060620-87060639 | Msa1133530:intron | 35.0% |
| ! | ATTCACGCTCCTAAAGATTT+TGG | - | chr7_3:87060774-87060793 | Msa1133530:CDS | 35.0% |
| GTTATTCACCAGAGGATAAT+AGG | - | chr7_3:87060874-87060893 | Msa1133530:CDS | 35.0% | |
| AGATCAAACCTATTATCCTC+TGG | + | chr7_3:87060885-87060904 | None:intergenic | 35.0% | |
| AGATGACGATGCAATATGAA+AGG | - | chr7_3:87061301-87061320 | Msa1133530:CDS | 35.0% | |
| TTGAAGTGGAAATTGCGAGA+GGG | + | chr7_3:87053948-87053967 | None:intergenic | 40.0% | |
| ! | GTCTCTGTTGTTTGTTGAAG+TGG | + | chr7_3:87053962-87053981 | None:intergenic | 40.0% |
| CTACTTGCAATCTCAACCAA+TGG | - | chr7_3:87054029-87054048 | Msa1133530:three_prime_UTR | 40.0% | |
| AATCGAATTCCATAGCCCAT+TGG | + | chr7_3:87054048-87054067 | None:intergenic | 40.0% | |
| TGGAGATGGAGTCTTTGATT+TGG | + | chr7_3:87054081-87054100 | None:intergenic | 40.0% | |
| ATCTCCAAATCCAAACAAGC+CGG | - | chr7_3:87054094-87054113 | Msa1133530:three_prime_UTR | 40.0% | |
| !!! | ATTGGTTTTGTTGCTGCAGA+TGG | - | chr7_3:87054277-87054296 | Msa1133530:CDS | 40.0% |
| !!! | TTGGTTTTGTTGCTGCAGAT+GGG | - | chr7_3:87054278-87054297 | Msa1133530:CDS | 40.0% |
| ! | CTCTCGGAACCTTTGATAAT+AGG | + | chr7_3:87054366-87054385 | None:intergenic | 40.0% |
| TTCCGAGAGATACAATTGTC+AGG | - | chr7_3:87054377-87054396 | Msa1133530:CDS | 40.0% | |
| TTATGATACGACCCAAGATG+TGG | - | chr7_3:87054424-87054443 | Msa1133530:CDS | 40.0% | |
| TCATTTGCAAGCCACATCTT+GGG | + | chr7_3:87054438-87054457 | None:intergenic | 40.0% | |
| ATCATTTGCAAGCCACATCT+TGG | + | chr7_3:87054439-87054458 | None:intergenic | 40.0% | |
| ! | AAGATGTGGCTTGCAAATGA+TGG | - | chr7_3:87054438-87054457 | Msa1133530:CDS | 40.0% |
| AACTTCGATGGTTTACTGCT+TGG | - | chr7_3:87054472-87054491 | Msa1133530:intron | 40.0% | |
| GGTTTACTGCTTGGAAACAA+AGG | - | chr7_3:87054481-87054500 | Msa1133530:intron | 40.0% | |
| CATTACTGGTGTCTACATGT+CGG | + | chr7_3:87054695-87054714 | None:intergenic | 40.0% | |
| !! | TTTTCCTTCAACGGAAGTGT+TGG | - | chr7_3:87054763-87054782 | Msa1133530:intron | 40.0% |
| !! | TAGTGTTTGGGTTGATGCAT+AGG | - | chr7_3:87054793-87054812 | Msa1133530:intron | 40.0% |
| GTACATGTTAGCATTTCCCT+AGG | - | chr7_3:87054969-87054988 | Msa1133530:intron | 40.0% | |
| ! | AGAAATGGTACACTGGTTGT+AGG | - | chr7_3:87055063-87055082 | Msa1133530:intron | 40.0% |
| GACGTAACATTAGTGTCTGA+TGG | + | chr7_3:87055143-87055162 | None:intergenic | 40.0% | |
| !! | CACTGCAATAGCTCTAAGAA+TGG | + | chr7_3:87055467-87055486 | None:intergenic | 40.0% |
| CATTCTTAGAGCTATTGCAG+TGG | - | chr7_3:87055465-87055484 | Msa1133530:intron | 40.0% | |
| TTAATGCAAGCTCAGCATGA+GGG | + | chr7_3:87055522-87055541 | None:intergenic | 40.0% | |
| TTTAATGCAAGCTCAGCATG+AGG | + | chr7_3:87055523-87055542 | None:intergenic | 40.0% | |
| CATGCTGAGCTTGCATTAAA+TGG | - | chr7_3:87055523-87055542 | Msa1133530:intron | 40.0% | |
| TGCTGAGCTTGCATTAAATG+GGG | - | chr7_3:87055525-87055544 | Msa1133530:intron | 40.0% | |
| ! | GTTCGTCTTCGTGCTTTTAT+AGG | - | chr7_3:87055601-87055620 | Msa1133530:intron | 40.0% |
| GACGAACGGAATTCTGTTAA+GGG | + | chr7_3:87055715-87055734 | None:intergenic | 40.0% | |
| AGACGAACGGAATTCTGTTA+AGG | + | chr7_3:87055716-87055735 | None:intergenic | 40.0% | |
| ATATCCATTGTGTGTTTGGG+AGG | - | chr7_3:87055749-87055768 | Msa1133530:CDS | 40.0% | |
| TATCCATTGTGTGTTTGGGA+GGG | - | chr7_3:87055750-87055769 | Msa1133530:CDS | 40.0% | |
| GCGAGGTAAATTCAACATTC+AGG | - | chr7_3:87055772-87055791 | Msa1133530:CDS | 40.0% | |
| TGTTCCAGTGTTGTGGTTAA+TGG | - | chr7_3:87055909-87055928 | Msa1133530:intron | 40.0% | |
| ATCACCATTAACCACAACAC+TGG | + | chr7_3:87055916-87055935 | None:intergenic | 40.0% | |
| ! | AATGGTGATGTTGTTGCTCA+AGG | - | chr7_3:87055927-87055946 | Msa1133530:intron | 40.0% |
| ! | CATCAGATTGGTTCCTTTAC+TGG | - | chr7_3:87056079-87056098 | Msa1133530:intron | 40.0% |
| ! | AGATTGGTTCCTTTACTGGT+AGG | - | chr7_3:87056083-87056102 | Msa1133530:intron | 40.0% |
| ! | CTTTACAACTTGCTTGCTCT+TGG | + | chr7_3:87056140-87056159 | None:intergenic | 40.0% |
| GCAAGCAAGTTGTAAAGTCA+AGG | - | chr7_3:87056143-87056162 | Msa1133530:intron | 40.0% | |
| ! | CAATTTCACTGCTTTGGATG+CGG | + | chr7_3:87056442-87056461 | None:intergenic | 40.0% |
| AAAATATCACTCTCCTGAGG+AGG | - | chr7_3:87056625-87056644 | Msa1133530:intron | 40.0% | |
| ACTGCAGTTAGATTGGATTG+TGG | - | chr7_3:87056813-87056832 | Msa1133530:CDS | 40.0% | |
| !! | CTGTCGCAAGTTGATAAGAA+AGG | + | chr7_3:87056850-87056869 | None:intergenic | 40.0% |
| TGACCGACAGCTGAATTAAT+TGG | - | chr7_3:87056992-87057011 | Msa1133530:intron | 40.0% | |
| AAGCACGGTGAACTACTAAA+AGG | + | chr7_3:87057091-87057110 | None:intergenic | 40.0% | |
| ! | ACAATTTTTGAACGTGGCAG+AGG | - | chr7_3:87057198-87057217 | Msa1133530:intron | 40.0% |
| CTACAAGGTTCGGATTTGTA+AGG | + | chr7_3:87057246-87057265 | None:intergenic | 40.0% | |
| CAAATCCGAACCTTGTAGTT+TGG | - | chr7_3:87057248-87057267 | Msa1133530:intron | 40.0% | |
| TCCCCATTTGCAATTTCTGA+AGG | + | chr7_3:87057301-87057320 | None:intergenic | 40.0% | |
| AAAGCTGATGCAATACGGAT+TGG | - | chr7_3:87057331-87057350 | Msa1133530:intron | 40.0% | |
| AATGGGGTTGAGACTTGATA+AGG | - | chr7_3:87057585-87057604 | Msa1133530:intron | 40.0% | |
| GTGCACCATAACATCTAAAG+AGG | + | chr7_3:87057762-87057781 | None:intergenic | 40.0% | |
| ACAGTATTCACGTTGCAGTT+CGG | - | chr7_3:87057784-87057803 | Msa1133530:intron | 40.0% | |
| ! | CACCTTGATGTTAGCATTGA+TGG | - | chr7_3:87057857-87057876 | Msa1133530:intron | 40.0% |
| CTCCATCAATGCTAACATCA+AGG | + | chr7_3:87057862-87057881 | None:intergenic | 40.0% | |
| GCTACAAGGTGACTGAATTA+TGG | - | chr7_3:87057933-87057952 | Msa1133530:CDS | 40.0% | |
| CATCATAGACTACACAGTTC+TGG | + | chr7_3:87057991-87058010 | None:intergenic | 40.0% | |
| GAACTGTGTAGTCTATGATG+TGG | - | chr7_3:87057991-87058010 | Msa1133530:CDS | 40.0% | |
| ! | GTCACACTTGATTTTTCCAC+CGG | - | chr7_3:87058020-87058039 | Msa1133530:intron | 40.0% |
| ! | AGAAATACTGAAGGGCATGA+TGG | - | chr7_3:87058207-87058226 | Msa1133530:intron | 40.0% |
| ! | GAAATACTGAAGGGCATGAT+GGG | - | chr7_3:87058208-87058227 | Msa1133530:intron | 40.0% |
| ATCCAGATTCGTATCAATGC+CGG | - | chr7_3:87058333-87058352 | Msa1133530:intron | 40.0% | |
| CATTCAAGCTCGAATCAGAA+TGG | - | chr7_3:87058488-87058507 | Msa1133530:intron | 40.0% | |
| !! | ACCTGGGTTTTATCTTGTCT+TGG | - | chr7_3:87058557-87058576 | Msa1133530:CDS | 40.0% |
| !! | CCTGGGTTTTATCTTGTCTT+GGG | - | chr7_3:87058558-87058577 | Msa1133530:CDS | 40.0% |
| !! | CTGGGTTTTATCTTGTCTTG+GGG | - | chr7_3:87058559-87058578 | Msa1133530:CDS | 40.0% |
| TCAGCGGATATAAATCCCAT+TGG | - | chr7_3:87058908-87058927 | Msa1133530:intron | 40.0% | |
| CTGCTTACTTATACTGCCAA+TGG | + | chr7_3:87058927-87058946 | None:intergenic | 40.0% | |
| CATTGGCAGTATAAGTAAGC+AGG | - | chr7_3:87058925-87058944 | Msa1133530:intron | 40.0% | |
| CCAAAGATGAGTAACCAAGA+TGG | + | chr7_3:87058982-87059001 | None:intergenic | 40.0% | |
| CCATCTTGGTTACTCATCTT+TGG | - | chr7_3:87058979-87058998 | Msa1133530:intron | 40.0% | |
| ACAGATTGCCAGAAAATGTC+TGG | + | chr7_3:87059282-87059301 | None:intergenic | 40.0% | |
| GCAATCTGTTATAAGGGTGA+TGG | - | chr7_3:87059293-87059312 | Msa1133530:intron | 40.0% | |
| TGCTCAATTAAGAACGAGTG+AGG | + | chr7_3:87059495-87059514 | None:intergenic | 40.0% | |
| !! | GCAGCTTGATGAAGTTGATA+TGG | - | chr7_3:87059512-87059531 | Msa1133530:intron | 40.0% |
| TGATATGGGAATGACTTACG+AGG | - | chr7_3:87059527-87059546 | Msa1133530:intron | 40.0% | |
| ! | CTACGCAAAATTTTCCGTTG+TGG | - | chr7_3:87059570-87059589 | Msa1133530:intron | 40.0% |
| TATACCTGGAACATGGAAAC+TGG | + | chr7_3:87059597-87059616 | None:intergenic | 40.0% | |
| CATGAGATATACCTGGAACA+TGG | + | chr7_3:87059604-87059623 | None:intergenic | 40.0% | |
| GGACAAACATGAGATATACC+TGG | + | chr7_3:87059611-87059630 | None:intergenic | 40.0% | |
| CCTATGGGGTTTATCTTTCT+CGG | + | chr7_3:87059799-87059818 | None:intergenic | 40.0% | |
| ! | TTACCTGCATGTCATTTGAC+AGG | - | chr7_3:87059838-87059857 | Msa1133530:CDS | 40.0% |
| !!! | TGAACTTATTTTGGCCTTGC+AGG | + | chr7_3:87059894-87059913 | None:intergenic | 40.0% |
| GTGACTTAGGATACATGGTA+AGG | + | chr7_3:87060411-87060430 | None:intergenic | 40.0% | |
| !! | CTCCGTATCGATTGAAAACA+TGG | + | chr7_3:87060455-87060474 | None:intergenic | 40.0% |
| !!! | ACTTTTTCAGCCACTTGTGA+TGG | + | chr7_3:87060633-87060652 | None:intergenic | 40.0% |
| AAAGTCAGGGTTGAATTGCT+AGG | - | chr7_3:87060746-87060765 | Msa1133530:intron | 40.0% | |
| AAAACAGAGAGAGAGAGAAC+CGG | + | chr7_3:87060800-87060819 | None:intergenic | 40.0% | |
| CAAGATGGCCGTATCAATTT+CGG | - | chr7_3:87060925-87060944 | Msa1133530:CDS | 40.0% | |
| !! | ATTAGATGGTGTTGGTGGAA+TGG | - | chr7_3:87061025-87061044 | Msa1133530:intron | 40.0% |
| !! | TTAGATGGTGTTGGTGGAAT+GGG | - | chr7_3:87061026-87061045 | Msa1133530:intron | 40.0% |
| ACACTACACATGGGATGAAA+GGG | + | chr7_3:87061225-87061244 | None:intergenic | 40.0% | |
| TACACTACACATGGGATGAA+AGG | + | chr7_3:87061226-87061245 | None:intergenic | 40.0% | |
| GTTGAAGTGGAAATTGCGAG+AGG | + | chr7_3:87053949-87053968 | None:intergenic | 45.0% | |
| AATCACGATGAGGCTCTTGA+AGG | - | chr7_3:87054003-87054022 | Msa1133530:three_prime_UTR | 45.0% | |
| !! | CAATCTCAACCAATGGGCTA+TGG | - | chr7_3:87054036-87054055 | Msa1133530:three_prime_UTR | 45.0% |
| ! | GGCTTGTTTGGATTTGGAGA+TGG | + | chr7_3:87054095-87054114 | None:intergenic | 45.0% |
| !! | ATAACCGGGGATTTCGAGTT+CGG | + | chr7_3:87054140-87054159 | None:intergenic | 45.0% |
| !! | TGGTGTCGAGTTCTAAGAAG+TGG | + | chr7_3:87054174-87054193 | None:intergenic | 45.0% |
| ! | ACTTCCTCCTCATGTTTCTG+AGG | - | chr7_3:87054524-87054543 | Msa1133530:intron | 45.0% |
| AATGCCTCAGAAACATGAGG+AGG | + | chr7_3:87054531-87054550 | None:intergenic | 45.0% | |
| !! | TCCTCATGTTTCTGAGGCAT+TGG | - | chr7_3:87054530-87054549 | Msa1133530:intron | 45.0% |
| !! | CCTCATGTTTCTGAGGCATT+GGG | - | chr7_3:87054531-87054550 | Msa1133530:intron | 45.0% |
| ATCACCAACACTTCCGTTGA+AGG | + | chr7_3:87054770-87054789 | None:intergenic | 45.0% | |
| GTGTCTGATGGAGAACAGAA+CGG | + | chr7_3:87055131-87055150 | None:intergenic | 45.0% | |
| TGTTACGTCCTTACTTTCCC+TGG | - | chr7_3:87055154-87055173 | Msa1133530:intron | 45.0% | |
| AAAGAGAGCCAGGGAAAGTA+AGG | + | chr7_3:87055165-87055184 | None:intergenic | 45.0% | |
| ! | GTGTCGACGATGTGTTTACT+CGG | - | chr7_3:87055206-87055225 | Msa1133530:intron | 45.0% |
| TCAATCACAAGATTGCCGCA+TGG | + | chr7_3:87055308-87055327 | None:intergenic | 45.0% | |
| TAATGCAAGCTCAGCATGAG+GGG | + | chr7_3:87055521-87055540 | None:intergenic | 45.0% | |
| !! | ATAGGTGCTACTCATACTCG+TGG | - | chr7_3:87055619-87055638 | Msa1133530:intron | 45.0% |
| AGTAATCACCAAGGCTGTGA+TGG | - | chr7_3:87055658-87055677 | Msa1133530:intron | 45.0% | |
| AGATGGATGTTCCAGTGTTG+TGG | - | chr7_3:87055902-87055921 | Msa1133530:intron | 45.0% | |
| TGCTCAGATAGATCTTGACG+TGG | - | chr7_3:87055986-87056005 | Msa1133530:intron | 45.0% | |
| ACGCCTTTCTGTTCCTCTTA+AGG | - | chr7_3:87056218-87056237 | Msa1133530:intron | 45.0% | |
| GGTATTCATGGCGACATCAT+AGG | + | chr7_3:87056309-87056328 | None:intergenic | 45.0% | |
| !! | CCAAATGCTATTTCCTCCTC+AGG | + | chr7_3:87056641-87056660 | None:intergenic | 45.0% |
| CCTGAGGAGGAAATAGCATT+TGG | - | chr7_3:87056638-87056657 | Msa1133530:intron | 45.0% | |
| GAGGAAATAGCATTTGGACC+TGG | - | chr7_3:87056644-87056663 | Msa1133530:intron | 45.0% | |
| TAATCCCATAACCAGCAACC+AGG | + | chr7_3:87056665-87056684 | None:intergenic | 45.0% | |
| ! | TTACGAAGAAGTGGAGCATC+TGG | - | chr7_3:87056686-87056705 | Msa1133530:intron | 45.0% |
| ACTTACCTTTCACGACCATC+TGG | + | chr7_3:87056778-87056797 | None:intergenic | 45.0% | |
| GCAAATTCTGTGCTGTCTGT+AGG | + | chr7_3:87057379-87057398 | None:intergenic | 45.0% | |
| GTTGCAGTTCGGAAATGACA+AGG | - | chr7_3:87057795-87057814 | Msa1133530:intron | 45.0% | |
| AATTTCCTCTGCCAGTACCT+TGG | + | chr7_3:87057828-87057847 | None:intergenic | 45.0% | |
| !! | AAGGTACTGGCAGAGGAAAT+TGG | - | chr7_3:87057827-87057846 | Msa1133530:intron | 45.0% |
| ! | TGGCAGAGGAAATTGGTTCA+TGG | - | chr7_3:87057834-87057853 | Msa1133530:intron | 45.0% |
| AATTCAGTCACCTTGTAGCG+TGG | + | chr7_3:87057932-87057951 | None:intergenic | 45.0% | |
| TCAACATAGAACTCCACCTC+AGG | - | chr7_3:87058089-87058108 | Msa1133530:intron | 45.0% | |
| TAGGACACCGAATGAGAAAG+TGG | - | chr7_3:87058120-87058139 | Msa1133530:intron | 45.0% | |
| AGGACACCGAATGAGAAAGT+GGG | - | chr7_3:87058121-87058140 | Msa1133530:intron | 45.0% | |
| TTGCCCAAACCAAAAGTCTG+TGG | - | chr7_3:87058169-87058188 | Msa1133530:intron | 45.0% | |
| TGTTAGCATCACTCTTGCCT+TGG | - | chr7_3:87058523-87058542 | Msa1133530:intron | 45.0% | |
| GTTAGCATCACTCTTGCCTT+GGG | - | chr7_3:87058524-87058543 | Msa1133530:intron | 45.0% | |
| CTTGGGTTCACAACAAACCT+GGG | - | chr7_3:87058541-87058560 | Msa1133530:intron | 45.0% | |
| CCCAAGACAAGATAAAACCC+AGG | + | chr7_3:87058561-87058580 | None:intergenic | 45.0% | |
| AGATGAGTAACCAAGATGGC+TGG | + | chr7_3:87058978-87058997 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTGGGTGAAGTCT+TGG | - | chr7_3:87059311-87059330 | Msa1133530:intron | 45.0% |
| ACATGGAAACTGGACCACAA+CGG | + | chr7_3:87059587-87059606 | None:intergenic | 45.0% | |
| ! | GAAGGAACAGTGAAAGCATG+TGG | - | chr7_3:87059703-87059722 | Msa1133530:CDS | 45.0% |
| CCGAGAAAGATAAACCCCAT+AGG | - | chr7_3:87059796-87059815 | Msa1133530:CDS | 45.0% | |
| GTCACTGTCACAGTAGTCTT+TGG | - | chr7_3:87059993-87060012 | Msa1133530:intron | 45.0% | |
| !! | ATGATAGGAAGGTGTCAAGG+TGG | + | chr7_3:87060700-87060719 | None:intergenic | 45.0% |
| ACTACATACCTCGGCATGAT+AGG | + | chr7_3:87060715-87060734 | None:intergenic | 45.0% | |
| !! | ACGCTCCTAAAGATTTTGGC+CGG | - | chr7_3:87060778-87060797 | Msa1133530:CDS | 45.0% |
| GAGAACCGGCCAAAATCTTT+AGG | + | chr7_3:87060786-87060805 | None:intergenic | 45.0% | |
| CTTGCAGAGTTATTCACCAG+AGG | - | chr7_3:87060866-87060885 | Msa1133530:CDS | 45.0% | |
| ATCAGCAAACCATGAGTCAG+TGG | - | chr7_3:87060995-87061014 | Msa1133530:CDS | 45.0% | |
| TCAGTGGCAGCTTCATTAGA+TGG | - | chr7_3:87061011-87061030 | Msa1133530:CDS | 45.0% | |
| GCAGCTTCATTAGATGGTGT+TGG | - | chr7_3:87061017-87061036 | Msa1133530:CDS | 45.0% | |
| ! | GCTTCATTAGATGGTGTTGG+TGG | - | chr7_3:87061020-87061039 | Msa1133530:CDS | 45.0% |
| ATTTGGATTGCCTGAACCTG+CGG | + | chr7_3:87061060-87061079 | None:intergenic | 45.0% | |
| GGTTCAGGCAATCCAAATGT+CGG | - | chr7_3:87061062-87061081 | Msa1133530:intron | 45.0% | |
| CATGTGCAAGACTGCAAATC+TGG | - | chr7_3:87061142-87061161 | Msa1133530:CDS | 45.0% | |
| AAATTGCGAGAGGGTCGGTA+TGG | + | chr7_3:87053939-87053958 | None:intergenic | 50.0% | |
| AGTGGAAATTGCGAGAGGGT+CGG | + | chr7_3:87053944-87053963 | None:intergenic | 50.0% | |
| !! | TTTCGAGTTCGGGTCCAAGA+CGG | + | chr7_3:87054129-87054148 | None:intergenic | 50.0% |
| !! | TAACCGGGGATTTCGAGTTC+GGG | + | chr7_3:87054139-87054158 | None:intergenic | 50.0% |
| GAACTCGAAATCCCCGGTTA+TGG | - | chr7_3:87054139-87054158 | Msa1133530:three_prime_UTR | 50.0% | |
| TGGTCTTCACAGCCATAACC+GGG | + | chr7_3:87054154-87054173 | None:intergenic | 50.0% | |
| GTGGTCTTCACAGCCATAAC+CGG | + | chr7_3:87054155-87054174 | None:intergenic | 50.0% | |
| CCCAATGCCTCAGAAACATG+AGG | + | chr7_3:87054534-87054553 | None:intergenic | 50.0% | |
| CACTTACACCGACACGAACA+CGG | - | chr7_3:87054660-87054679 | Msa1133530:CDS | 50.0% | |
| ACTTACACCGACACGAACAC+GGG | - | chr7_3:87054661-87054680 | Msa1133530:CDS | 50.0% | |
| GGAGAACAGAACGGTACAAC+AGG | + | chr7_3:87055122-87055141 | None:intergenic | 50.0% | |
| GCATCAGCATTGCATCCATG+CGG | - | chr7_3:87055290-87055309 | Msa1133530:intron | 50.0% | |
| AATGCAAGCTCAGCATGAGG+GGG | + | chr7_3:87055520-87055539 | None:intergenic | 50.0% | |
| AATCACCAAGGCTGTGATGG+TGG | - | chr7_3:87055661-87055680 | Msa1133530:intron | 50.0% | |
| ! | GATGGTGGTCGCCTTTACTA+TGG | - | chr7_3:87055676-87055695 | Msa1133530:intron | 50.0% |
| GTGGTCGCCTTTACTATGGT+AGG | - | chr7_3:87055680-87055699 | Msa1133530:intron | 50.0% | |
| GGCTTGCAACCTACCAGTAA+AGG | + | chr7_3:87056095-87056114 | None:intergenic | 50.0% | |
| TGGTAGGTTGCAAGCCTTAG+AGG | - | chr7_3:87056099-87056118 | Msa1133530:intron | 50.0% | |
| TAGCATTTGGACCTGGTTGC+TGG | - | chr7_3:87056651-87056670 | Msa1133530:intron | 50.0% | |
| ! | TTGGACCTGGTTGCTGGTTA+TGG | - | chr7_3:87056657-87056676 | Msa1133530:intron | 50.0% |
| ! | TGGACCTGGTTGCTGGTTAT+GGG | - | chr7_3:87056658-87056677 | Msa1133530:intron | 50.0% |
| TTTCTGCTCCCTCTTTCTGG+TGG | - | chr7_3:87056710-87056729 | Msa1133530:intron | 50.0% | |
| TGTCTGCTCCACCAGAAAGA+GGG | + | chr7_3:87056721-87056740 | None:intergenic | 50.0% | |
| TCCTCTGTTGCTGCGATTGT+TGG | - | chr7_3:87056743-87056762 | Msa1133530:CDS | 50.0% | |
| TCCAACAATCGCAGCAACAG+AGG | + | chr7_3:87056747-87056766 | None:intergenic | 50.0% | |
| TGTTGGATGCATGTGCCAGA+TGG | - | chr7_3:87056760-87056779 | Msa1133530:CDS | 50.0% | |
| ATGTGCCAGATGGTCGTGAA+AGG | - | chr7_3:87056770-87056789 | Msa1133530:CDS | 50.0% | |
| !! | CTCATTCGGTGTCCTATCAG+AGG | + | chr7_3:87058116-87058135 | None:intergenic | 50.0% |
| GCTGAGCCCACTTTCTCATT+CGG | + | chr7_3:87058130-87058149 | None:intergenic | 50.0% | |
| ! | GAATGAGAAAGTGGGCTCAG+CGG | - | chr7_3:87058129-87058148 | Msa1133530:intron | 50.0% |
| ! | AATGAGAAAGTGGGCTCAGC+GGG | - | chr7_3:87058130-87058149 | Msa1133530:intron | 50.0% |
| !! | GTCCGGCATTGATACGAATC+TGG | + | chr7_3:87058338-87058357 | None:intergenic | 50.0% |
| !! | CCAGGTTTGTTGTGAACCCA+AGG | + | chr7_3:87058543-87058562 | None:intergenic | 50.0% |
| CCTTGGGTTCACAACAAACC+TGG | - | chr7_3:87058540-87058559 | Msa1133530:intron | 50.0% | |
| ATCTTCGGTCATTCCTGCGA+TGG | - | chr7_3:87058948-87058967 | Msa1133530:intron | 50.0% | |
| TCTTCGGTCATTCCTGCGAT+GGG | - | chr7_3:87058949-87058968 | Msa1133530:intron | 50.0% | |
| ATAGGCTCCAGTTCAGCTGT+GGG | + | chr7_3:87059025-87059044 | None:intergenic | 50.0% | |
| TATAGGCTCCAGTTCAGCTG+TGG | + | chr7_3:87059026-87059045 | None:intergenic | 50.0% | |
| !! | TTTCAGTGGCCTTGTTCTCC+TGG | - | chr7_3:87059401-87059420 | Msa1133530:CDS | 50.0% |
| !! | TTCAGTGGCCTTGTTCTCCT+GGG | - | chr7_3:87059402-87059421 | Msa1133530:CDS | 50.0% |
| TGGTCCAGTTTCCATGTTCC+AGG | - | chr7_3:87059590-87059609 | Msa1133530:intron | 50.0% | |
| CGACCTGTCAAATGACATGC+AGG | + | chr7_3:87059844-87059863 | None:intergenic | 50.0% | |
| TATTGTTCGCTGGTCCTGCA+AGG | - | chr7_3:87059877-87059896 | Msa1133530:intron | 50.0% | |
| TCGATACGGAGAGCTCTACT+TGG | - | chr7_3:87060464-87060483 | Msa1133530:intron | 50.0% | |
| !! | GGCATGATAGGAAGGTGTCA+AGG | + | chr7_3:87060703-87060722 | None:intergenic | 50.0% |
| CATACCTCGGCATGATAGGA+AGG | + | chr7_3:87060711-87060730 | None:intergenic | 50.0% | |
| CGATGAACTCGTACATGAGC+TGG | - | chr7_3:87060953-87060972 | Msa1133530:CDS | 50.0% | |
| !! | ATGAAGCTGCCACTGACTCA+TGG | + | chr7_3:87061007-87061026 | None:intergenic | 50.0% |
| TTCGGGTCCAAGACGGATGA+CGG | + | chr7_3:87054122-87054141 | None:intergenic | 55.0% | |
| GGTCTTCACAGCCATAACCG+GGG | + | chr7_3:87054153-87054172 | None:intergenic | 55.0% | |
| GTCATGACCCGTGTTCGTGT+CGG | + | chr7_3:87054671-87054690 | None:intergenic | 55.0% | |
| !! | GGTGCTACTCATACTCGTGG+AGG | - | chr7_3:87055622-87055641 | Msa1133530:intron | 55.0% |
| TCGCCCTCCCAAACACACAA+TGG | + | chr7_3:87055756-87055775 | None:intergenic | 55.0% | |
| ATTGTGTGTTTGGGAGGGCG+AGG | - | chr7_3:87055755-87055774 | Msa1133530:CDS | 55.0% | |
| GGCTTTCTGCTCCCTCTTTC+TGG | - | chr7_3:87056707-87056726 | Msa1133530:intron | 55.0% | |
| CTGTCTGCTCCACCAGAAAG+AGG | + | chr7_3:87056722-87056741 | None:intergenic | 55.0% | |
| AATGACAAGGTCGCGAGCCA+AGG | - | chr7_3:87057808-87057827 | Msa1133530:intron | 55.0% | |
| TCCACCTCAGGACCTCTGAT+AGG | - | chr7_3:87058101-87058120 | Msa1133530:intron | 55.0% | |
| TCCTATCAGAGGTCCTGAGG+TGG | + | chr7_3:87058105-87058124 | None:intergenic | 55.0% | |
| GTGTCCTATCAGAGGTCCTG+AGG | + | chr7_3:87058108-87058127 | None:intergenic | 55.0% | |
| GGAGCTCCAACGTGGATGAA+GGG | - | chr7_3:87058580-87058599 | Msa1133530:CDS | 55.0% | |
| ACGCAACCCTTCATCCACGT+TGG | + | chr7_3:87058589-87058608 | None:intergenic | 55.0% | |
| AACGTGGATGAAGGGTTGCG+TGG | - | chr7_3:87058588-87058607 | Msa1133530:CDS | 55.0% | |
| GTTGCGTGGCTACTTGACGA+AGG | - | chr7_3:87058602-87058621 | Msa1133530:CDS | 55.0% | |
| GACACCTTCCTATCATGCCG+AGG | - | chr7_3:87060704-87060723 | Msa1133530:intron | 55.0% | |
| !! | GGCGCCGGCTTGTTTGGATT+TGG | + | chr7_3:87054101-87054120 | None:intergenic | 60.0% |
| GGACCCGAACTCGAAATCCC+CGG | - | chr7_3:87054133-87054152 | Msa1133530:three_prime_UTR | 60.0% | |
| AGCTCAGCATGAGGGGGAGA+TGG | + | chr7_3:87055514-87055533 | None:intergenic | 60.0% | |
| AAGGTCGCGAGCCAAGGTAC+TGG | - | chr7_3:87057814-87057833 | Msa1133530:intron | 60.0% | |
| GGGAAAGCGACCACGCTACA+AGG | - | chr7_3:87057919-87057938 | Msa1133530:CDS | 60.0% | |
| TGTCTTGGGGAGCTCCAACG+TGG | - | chr7_3:87058572-87058591 | Msa1133530:CDS | 60.0% | |
| GGGAGCTCCAACGTGGATGA+AGG | - | chr7_3:87058579-87058598 | Msa1133530:CDS | 60.0% | |
| AGCTCCACCCACAGCTGAAC+TGG | - | chr7_3:87059015-87059034 | Msa1133530:intron | 60.0% | |
| !! | GATGACGGCGCCGGCTTGTT+TGG | + | chr7_3:87054107-87054126 | None:intergenic | 65.0% |
| ! | TCCAAGACGGATGACGGCGC+CGG | + | chr7_3:87054116-87054135 | None:intergenic | 65.0% |
| GGCGACCACCATCACAGCCT+TGG | + | chr7_3:87055669-87055688 | None:intergenic | 65.0% | |
| !! | GCGAGCCAAGGTACTGGCAG+AGG | - | chr7_3:87057820-87057839 | Msa1133530:intron | 65.0% |
| CGATGGGCAGCCAGCCATCT+TGG | - | chr7_3:87058965-87058984 | Msa1133530:intron | 65.0% | |
| GGCTCCAGTTCAGCTGTGGG+TGG | + | chr7_3:87059022-87059041 | None:intergenic | 65.0% | |
| GGAATGGGAGTTGCTGCCGC+AGG | - | chr7_3:87061041-87061060 | Msa1133530:intron | 65.0% | |
| GGAGTTGCTGCCGCAGGTTC+AGG | - | chr7_3:87061047-87061066 | Msa1133530:intron | 65.0% | |
| ! | GATGGCTGGCTGCCCATCGC+AGG | + | chr7_3:87058964-87058983 | None:intergenic | 70.0% |
| GCCGGCGCCGTCATCCGTCT+TGG | - | chr7_3:87054112-87054131 | Msa1133530:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 87053894 | 87061443 | 87053894 | ID=Msa1133530;Name=Msa1133530 |
| chr7_3 | mRNA | 87053894 | 87061443 | 87053894 | ID=Msa1133530-mRNA-1;Parent=Msa1133530;Name=Msa1133530-mRNA-1;_AED=0.11;_eAED=0.11;_QI=116|0.91|0.92|1|1|1|13|352|727 |
| chr7_3 | exon | 87053894 | 87054464 | 87053894 | ID=Msa1133530-mRNA-1:exon:26177;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87054612 | 87054740 | 87054612 | ID=Msa1133530-mRNA-1:exon:26176;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87055726 | 87055821 | 87055726 | ID=Msa1133530-mRNA-1:exon:26175;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87056274 | 87056441 | 87056274 | ID=Msa1133530-mRNA-1:exon:26174;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87056714 | 87056890 | 87056714 | ID=Msa1133530-mRNA-1:exon:26173;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87057397 | 87057535 | 87057397 | ID=Msa1133530-mRNA-1:exon:26172;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87057897 | 87058032 | 87057897 | ID=Msa1133530-mRNA-1:exon:26171;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87058546 | 87058714 | 87058546 | ID=Msa1133530-mRNA-1:exon:26170;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87059098 | 87059232 | 87059098 | ID=Msa1133530-mRNA-1:exon:26169;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87059330 | 87059433 | 87059330 | ID=Msa1133530-mRNA-1:exon:26168;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87059640 | 87059863 | 87059640 | ID=Msa1133530-mRNA-1:exon:26167;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87060748 | 87061041 | 87060748 | ID=Msa1133530-mRNA-1:exon:26166;Parent=Msa1133530-mRNA-1 |
| chr7_3 | exon | 87061134 | 87061443 | 87061134 | ID=Msa1133530-mRNA-1:exon:26165;Parent=Msa1133530-mRNA-1 |
| chr7_3 | five_prime_UTR | 87061328 | 87061443 | 87061328 | ID=Msa1133530-mRNA-1:five_prime_utr;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87061134 | 87061327 | 87061134 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87060748 | 87061041 | 87060748 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87059640 | 87059863 | 87059640 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87059330 | 87059433 | 87059330 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87059098 | 87059232 | 87059098 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87058546 | 87058714 | 87058546 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87057897 | 87058032 | 87057897 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87057397 | 87057535 | 87057397 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87056714 | 87056890 | 87056714 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87056274 | 87056441 | 87056274 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87055726 | 87055821 | 87055726 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87054612 | 87054740 | 87054612 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | CDS | 87054246 | 87054464 | 87054246 | ID=Msa1133530-mRNA-1:cds;Parent=Msa1133530-mRNA-1 |
| chr7_3 | three_prime_UTR | 87053894 | 87054245 | 87053894 | ID=Msa1133530-mRNA-1:three_prime_utr;Parent=Msa1133530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
