Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359520 | XP_003588885.1 | 98.387 | 496 | 8 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1008 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359520 | sp|P93338|GAPN_NICPL | 89.315 | 496 | 53 | 0 | 1 | 496 | 1 | 496 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359520 | G7I8A4 | 98.387 | 496 | 8 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1008 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa1359520 | 0.821198 | 4.586625e-53 | -8.615850e-47 |
| Msa0004990 | Msa1359520 | 0.821034 | 5.003505e-53 | -8.615850e-47 |
| Msa0021400 | Msa1359520 | 0.843860 | 1.080464e-58 | -8.615850e-47 |
| Msa0029700 | Msa1359520 | 0.816499 | 5.358395e-52 | -8.615850e-47 |
| Msa0036550 | Msa1359520 | 0.806454 | 8.163197e-50 | -8.615850e-47 |
| Msa0036560 | Msa1359520 | -0.802929 | 4.442547e-49 | -8.615850e-47 |
| Msa0038010 | Msa1359520 | 0.821491 | 3.925813e-53 | -8.615850e-47 |
| Msa0046430 | Msa1359520 | 0.808677 | 2.753228e-50 | -8.615850e-47 |
| Msa0051910 | Msa1359520 | 0.805472 | 1.313430e-49 | -8.615850e-47 |
| Msa0053040 | Msa1359520 | 0.820340 | 7.222271e-53 | -8.615850e-47 |
| Msa0054860 | Msa1359520 | 0.958366 | 2.811833e-116 | -8.615850e-47 |
| Msa0064960 | Msa1359520 | 0.814269 | 1.679113e-51 | -8.615850e-47 |
| Msa0072440 | Msa1359520 | 0.814743 | 1.318745e-51 | -8.615850e-47 |
| Msa0078160 | Msa1359520 | -0.818687 | 1.721175e-52 | -8.615850e-47 |
| Msa0078170 | Msa1359520 | -0.812715 | 3.687873e-51 | -8.615850e-47 |
| Msa0080010 | Msa1359520 | 0.813254 | 2.809054e-51 | -8.615850e-47 |
| Msa0080020 | Msa1359520 | 0.817081 | 3.968037e-52 | -8.615850e-47 |
| Msa0085710 | Msa1359520 | 0.826921 | 2.080587e-54 | -8.615850e-47 |
| Msa0090190 | Msa1359520 | 0.805490 | 1.301945e-49 | -8.615850e-47 |
| Msa0100200 | Msa1359520 | 0.993382 | 2.389702e-199 | -8.615850e-47 |
| Msa0107830 | Msa1359520 | 0.815009 | 1.151185e-51 | -8.615850e-47 |
| Msa0110240 | Msa1359520 | 0.822665 | 2.097419e-53 | -8.615850e-47 |
| Msa1349420 | Msa1359520 | 0.841043 | 6.034297e-58 | -8.615850e-47 |
| Msa1357840 | Msa1359520 | 0.802070 | 6.678803e-49 | -8.615850e-47 |
| Msa1359520 | Msa1362520 | 0.831209 | 1.900608e-55 | -8.615850e-47 |
| Msa1359520 | Msa1364690 | 0.829040 | 6.430695e-55 | -8.615850e-47 |
| Msa1359520 | Msa1375640 | 0.824242 | 8.974159e-54 | -8.615850e-47 |
| Msa1359520 | Msa1376520 | 0.826977 | 2.017510e-54 | -8.615850e-47 |
| Msa1359520 | Msa1377190 | 0.844985 | 5.383736e-59 | -8.615850e-47 |
| Msa1359520 | Msa1377460 | 0.830630 | 2.635445e-55 | -8.615850e-47 |
| Msa1359520 | Msa1378020 | 0.802545 | 5.332533e-49 | -8.615850e-47 |
| Msa1359520 | Msa1393730 | 0.801738 | 7.816149e-49 | -8.615850e-47 |
| Msa1359520 | Msa1395720 | 0.805079 | 1.587496e-49 | -8.615850e-47 |
| Msa1359520 | Msa1407040 | 0.807373 | 5.217693e-50 | -8.615850e-47 |
| Msa1359520 | Msa1408320 | 0.805363 | 1.383780e-49 | -8.615850e-47 |
| Msa1359520 | Msa1409060 | 0.803764 | 2.983373e-49 | -8.615850e-47 |
| Msa1359520 | Msa1414000 | -0.801457 | 8.923900e-49 | -8.615850e-47 |
| Msa1359520 | Msa1417220 | 0.813664 | 2.282276e-51 | -8.615850e-47 |
| Msa1359520 | Msa1429190 | 0.819113 | 1.376988e-52 | -8.615850e-47 |
| Msa1359520 | Msa1434700 | 0.848735 | 5.071821e-60 | -8.615850e-47 |
| Msa1359520 | Msa1437590 | 0.846154 | 2.595133e-59 | -8.615850e-47 |
| Msa1359520 | Msa1453890 | 0.807801 | 4.232853e-50 | -8.615850e-47 |
| Msa1359520 | Msa1463640 | 0.824232 | 9.023076e-54 | -8.615850e-47 |
| Msa0603310 | Msa1359520 | 0.805578 | 1.247475e-49 | -8.615850e-47 |
| Msa0614960 | Msa1359520 | 0.807760 | 4.318431e-50 | -8.615850e-47 |
| Msa0619450 | Msa1359520 | -0.811276 | 7.592236e-51 | -8.615850e-47 |
| Msa0619530 | Msa1359520 | -0.809358 | 1.968629e-50 | -8.615850e-47 |
| Msa0622890 | Msa1359520 | 0.806672 | 7.343335e-50 | -8.615850e-47 |
| Msa0637590 | Msa1359520 | 0.809145 | 2.186366e-50 | -8.615850e-47 |
| Msa0637700 | Msa1359520 | 0.826114 | 3.239891e-54 | -8.615850e-47 |
| Msa0644340 | Msa1359520 | 0.828130 | 1.066427e-54 | -8.615850e-47 |
| Msa0650550 | Msa1359520 | 0.844448 | 7.512972e-59 | -8.615850e-47 |
| Msa0655370 | Msa1359520 | 0.824012 | 1.016271e-53 | -8.615850e-47 |
| Msa0659230 | Msa1359520 | 0.802035 | 6.791263e-49 | -8.615850e-47 |
| Msa0659580 | Msa1359520 | -0.810058 | 1.391704e-50 | -8.615850e-47 |
| Msa0679220 | Msa1359520 | 0.808284 | 3.339642e-50 | -8.615850e-47 |
| Msa0680460 | Msa1359520 | 0.809619 | 1.730577e-50 | -8.615850e-47 |
| Msa0689840 | Msa1359520 | 0.808334 | 3.258936e-50 | -8.615850e-47 |
| Msa0699170 | Msa1359520 | 0.815044 | 1.131082e-51 | -8.615850e-47 |
| Msa0711240 | Msa1359520 | 0.821383 | 4.157733e-53 | -8.615850e-47 |
| Msa0716980 | Msa1359520 | 0.809442 | 1.888578e-50 | -8.615850e-47 |
| Msa0734700 | Msa1359520 | 0.813414 | 2.590584e-51 | -8.615850e-47 |
| Msa0735340 | Msa1359520 | 0.855839 | 4.818715e-62 | -8.615850e-47 |
| Msa0743370 | Msa1359520 | 0.829746 | 4.331169e-55 | -8.615850e-47 |
| Msa0744710 | Msa1359520 | 0.820631 | 6.192360e-53 | -8.615850e-47 |
| Msa0747710 | Msa1359520 | 0.823594 | 1.273314e-53 | -8.615850e-47 |
| Msa0750790 | Msa1359520 | 0.829503 | 4.962523e-55 | -8.615850e-47 |
| Msa0750830 | Msa1359520 | 0.839881 | 1.215599e-57 | -8.615850e-47 |
| Msa0751510 | Msa1359520 | 0.805003 | 1.646594e-49 | -8.615850e-47 |
| Msa0753410 | Msa1359520 | 0.806557 | 7.763414e-50 | -8.615850e-47 |
| Msa0756570 | Msa1359520 | 0.808884 | 2.486834e-50 | -8.615850e-47 |
| Msa0772350 | Msa1359520 | 0.807526 | 4.842977e-50 | -8.615850e-47 |
| Msa0777210 | Msa1359520 | 0.861026 | 1.369908e-63 | -8.615850e-47 |
| Msa0777600 | Msa1359520 | 0.803595 | 3.234098e-49 | -8.615850e-47 |
| Msa0794200 | Msa1359520 | 0.823758 | 1.165558e-53 | -8.615850e-47 |
| Msa0797950 | Msa1359520 | 0.804075 | 2.570995e-49 | -8.615850e-47 |
| Msa0799110 | Msa1359520 | 0.810439 | 1.152058e-50 | -8.615850e-47 |
| Msa0799120 | Msa1359520 | 0.820443 | 6.839325e-53 | -8.615850e-47 |
| Msa0801860 | Msa1359520 | 0.803739 | 3.018955e-49 | -8.615850e-47 |
| Msa0813610 | Msa1359520 | 0.819987 | 8.700790e-53 | -8.615850e-47 |
| Msa0814350 | Msa1359520 | 0.858798 | 6.433453e-63 | -8.615850e-47 |
| Msa0814660 | Msa1359520 | 0.820429 | 6.893485e-53 | -8.615850e-47 |
| Msa0826240 | Msa1359520 | 0.819598 | 1.068010e-52 | -8.615850e-47 |
| Msa0829990 | Msa1359520 | 0.809031 | 2.313382e-50 | -8.615850e-47 |
| Msa0840540 | Msa1359520 | 0.802212 | 6.243683e-49 | -8.615850e-47 |
| Msa0120860 | Msa1359520 | 0.818060 | 2.386352e-52 | -8.615850e-47 |
| Msa0124960 | Msa1359520 | 0.810847 | 9.404876e-51 | -8.615850e-47 |
| Msa0128740 | Msa1359520 | 0.801694 | 7.980484e-49 | -8.615850e-47 |
| Msa0129270 | Msa1359520 | 0.807425 | 5.087456e-50 | -8.615850e-47 |
| Msa0130360 | Msa1359520 | 0.841568 | 4.390470e-58 | -8.615850e-47 |
| Msa0132250 | Msa1359520 | 0.804490 | 2.106880e-49 | -8.615850e-47 |
| Msa0137760 | Msa1359520 | 0.825261 | 5.162717e-54 | -8.615850e-47 |
| Msa0145990 | Msa1359520 | -0.801843 | 7.434774e-49 | -8.615850e-47 |
| Msa0154730 | Msa1359520 | 0.806777 | 6.976212e-50 | -8.615850e-47 |
| Msa0154750 | Msa1359520 | 0.817485 | 3.218235e-52 | -8.615850e-47 |
| Msa0171740 | Msa1359520 | 0.805571 | 1.251612e-49 | -8.615850e-47 |
| Msa0175060 | Msa1359520 | 0.829267 | 5.663068e-55 | -8.615850e-47 |
| Msa0176600 | Msa1359520 | 0.800484 | 1.410167e-48 | -8.615850e-47 |
| Msa0182840 | Msa1359520 | 0.804375 | 2.226729e-49 | -8.615850e-47 |
| Msa0186200 | Msa1359520 | 0.824640 | 7.234334e-54 | -8.615850e-47 |
| Msa0200090 | Msa1359520 | 0.807916 | 4.000610e-50 | -8.615850e-47 |
| Msa0227790 | Msa1359520 | 0.823017 | 1.736672e-53 | -8.615850e-47 |
| Msa0238140 | Msa1359520 | 0.806841 | 6.760946e-50 | -8.615850e-47 |
| Msa1225280 | Msa1359520 | -0.808785 | 2.611498e-50 | -8.615850e-47 |
| Msa1239190 | Msa1359520 | 0.804834 | 1.786002e-49 | -8.615850e-47 |
| Msa1254870 | Msa1359520 | 0.812248 | 4.663914e-51 | -8.615850e-47 |
| Msa1259570 | Msa1359520 | 0.831548 | 1.568594e-55 | -8.615850e-47 |
| Msa1263370 | Msa1359520 | 0.838370 | 2.993606e-57 | -8.615850e-47 |
| Msa1269200 | Msa1359520 | 0.800991 | 1.111431e-48 | -8.615850e-47 |
| Msa1296490 | Msa1359520 | 0.810238 | 1.272771e-50 | -8.615850e-47 |
| Msa1299310 | Msa1359520 | 0.814010 | 1.915067e-51 | -8.615850e-47 |
| Msa1300570 | Msa1359520 | 0.806408 | 8.345457e-50 | -8.615850e-47 |
| Msa1302630 | Msa1359520 | 0.810885 | 9.227947e-51 | -8.615850e-47 |
| Msa1317740 | Msa1359520 | 0.802612 | 5.165722e-49 | -8.615850e-47 |
| Msa1320160 | Msa1359520 | 0.800208 | 1.605213e-48 | -8.615850e-47 |
| Msa1328430 | Msa1359520 | 0.811665 | 6.249674e-51 | -8.615850e-47 |
| Msa1329770 | Msa1359520 | 0.806284 | 8.865025e-50 | -8.615850e-47 |
| Msa1335500 | Msa1359520 | 0.811687 | 6.181912e-51 | -8.615850e-47 |
| Msa0372100 | Msa1359520 | 0.812446 | 4.221482e-51 | -8.615850e-47 |
| Msa0375550 | Msa1359520 | 0.836641 | 8.307957e-57 | -8.615850e-47 |
| Msa0390200 | Msa1359520 | 0.807166 | 5.771982e-50 | -8.615850e-47 |
| Msa0405200 | Msa1359520 | 0.823759 | 1.165137e-53 | -8.615850e-47 |
| Msa0417060 | Msa1359520 | 0.804172 | 2.453772e-49 | -8.615850e-47 |
| Msa0433090 | Msa1359520 | 0.853555 | 2.212291e-61 | -8.615850e-47 |
| Msa0434140 | Msa1359520 | 0.817425 | 3.320351e-52 | -8.615850e-47 |
| Msa0449500 | Msa1359520 | 0.822239 | 2.635339e-53 | -8.615850e-47 |
| Msa0459930 | Msa1359520 | 0.817154 | 3.820904e-52 | -8.615850e-47 |
| Msa0465420 | Msa1359520 | 0.810064 | 1.387555e-50 | -8.615850e-47 |
| Msa0474290 | Msa1359520 | -0.809210 | 2.118123e-50 | -8.615850e-47 |
| Msa0985380 | Msa1359520 | 0.819179 | 1.330504e-52 | -8.615850e-47 |
| Msa0985980 | Msa1359520 | -0.805370 | 1.379711e-49 | -8.615850e-47 |
| Msa0987020 | Msa1359520 | 0.810699 | 1.012054e-50 | -8.615850e-47 |
| Msa0987550 | Msa1359520 | 0.820639 | 6.166454e-53 | -8.615850e-47 |
| Msa0996990 | Msa1359520 | 0.800033 | 1.742336e-48 | -8.615850e-47 |
| Msa1003730 | Msa1359520 | 0.815078 | 1.111544e-51 | -8.615850e-47 |
| Msa1026970 | Msa1359520 | 0.833881 | 4.133087e-56 | -8.615850e-47 |
| Msa1031060 | Msa1359520 | 0.802399 | 5.714067e-49 | -8.615850e-47 |
| Msa1035050 | Msa1359520 | 0.805332 | 1.405226e-49 | -8.615850e-47 |
| Msa1036590 | Msa1359520 | 0.836619 | 8.414555e-57 | -8.615850e-47 |
| Msa1037360 | Msa1359520 | 0.813444 | 2.551598e-51 | -8.615850e-47 |
| Msa1040330 | Msa1359520 | 0.809844 | 1.548106e-50 | -8.615850e-47 |
| Msa1075090 | Msa1359520 | 0.809745 | 1.625602e-50 | -8.615850e-47 |
| Msa1076900 | Msa1359520 | 0.838457 | 2.843645e-57 | -8.615850e-47 |
| Msa1085560 | Msa1359520 | 0.850403 | 1.736384e-60 | -8.615850e-47 |
| Msa1085820 | Msa1359520 | 0.860279 | 2.307758e-63 | -8.615850e-47 |
| Msa1094810 | Msa1359520 | 0.801167 | 1.023187e-48 | -8.615850e-47 |
| Msa0242720 | Msa1359520 | 0.809351 | 1.975391e-50 | -8.615850e-47 |
| Msa0244310 | Msa1359520 | 0.803230 | 3.849516e-49 | -8.615850e-47 |
| Msa0261020 | Msa1359520 | -0.825791 | 3.866032e-54 | -8.615850e-47 |
| Msa0264220 | Msa1359520 | 0.800857 | 1.183897e-48 | -8.615850e-47 |
| Msa0269710 | Msa1359520 | 0.803585 | 3.250162e-49 | -8.615850e-47 |
| Msa0276780 | Msa1359520 | 0.837416 | 5.265833e-57 | -8.615850e-47 |
| Msa0308740 | Msa1359520 | 0.832420 | 9.550612e-56 | -8.615850e-47 |
| Msa0320170 | Msa1359520 | 0.813591 | 2.369288e-51 | -8.615850e-47 |
| Msa0336640 | Msa1359520 | 0.830502 | 2.832022e-55 | -8.615850e-47 |
| Msa0343520 | Msa1359520 | 0.803536 | 3.326859e-49 | -8.615850e-47 |
| Msa0346170 | Msa1359520 | 0.817056 | 4.019360e-52 | -8.615850e-47 |
| Msa0350180 | Msa1359520 | 0.825865 | 3.712435e-54 | -8.615850e-47 |
| Msa0357470 | Msa1359520 | 0.819790 | 9.652788e-53 | -8.615850e-47 |
| Msa0357510 | Msa1359520 | 0.819907 | 9.075482e-53 | -8.615850e-47 |
| Msa0357530 | Msa1359520 | 0.814808 | 1.275933e-51 | -8.615850e-47 |
| Msa1107220 | Msa1359520 | 0.834025 | 3.804998e-56 | -8.615850e-47 |
| Msa1107250 | Msa1359520 | 0.819209 | 1.309940e-52 | -8.615850e-47 |
| Msa1111900 | Msa1359520 | 0.819390 | 1.191062e-52 | -8.615850e-47 |
| Msa1119670 | Msa1359520 | 0.803310 | 3.705773e-49 | -8.615850e-47 |
| Msa1123000 | Msa1359520 | 0.808286 | 3.337797e-50 | -8.615850e-47 |
| Msa1124220 | Msa1359520 | 0.808069 | 3.711978e-50 | -8.615850e-47 |
| Msa1146980 | Msa1359520 | 0.801392 | 9.202666e-49 | -8.615850e-47 |
| Msa1150740 | Msa1359520 | 0.805908 | 1.063750e-49 | -8.615850e-47 |
| Msa1150760 | Msa1359520 | 0.827986 | 1.155455e-54 | -8.615850e-47 |
| Msa1154310 | Msa1359520 | 0.838963 | 2.103647e-57 | -8.615850e-47 |
| Msa1163710 | Msa1359520 | 0.809675 | 1.682880e-50 | -8.615850e-47 |
| Msa1191270 | Msa1359520 | 0.833945 | 3.982910e-56 | -8.615850e-47 |
| Msa1202110 | Msa1359520 | 0.811120 | 8.206967e-51 | -8.615850e-47 |
| Msa1211160 | Msa1359520 | 0.808236 | 3.419929e-50 | -8.615850e-47 |
| Msa1211320 | Msa1359520 | 0.840538 | 8.188103e-58 | -8.615850e-47 |
| Msa1223710 | Msa1359520 | 0.825613 | 4.260728e-54 | -8.615850e-47 |
| Msa0497680 | Msa1359520 | 0.836025 | 1.191786e-56 | -8.615850e-47 |
| Msa0511280 | Msa1359520 | 0.804295 | 2.313927e-49 | -8.615850e-47 |
| Msa0511380 | Msa1359520 | 0.828058 | 1.109970e-54 | -8.615850e-47 |
| Msa0517200 | Msa1359520 | 0.802724 | 4.898362e-49 | -8.615850e-47 |
| Msa0518720 | Msa1359520 | -0.811926 | 5.482944e-51 | -8.615850e-47 |
| Msa0521720 | Msa1359520 | 0.802084 | 6.634405e-49 | -8.615850e-47 |
| Msa0522280 | Msa1359520 | 0.800446 | 1.435737e-48 | -8.615850e-47 |
| Msa0524710 | Msa1359520 | 0.846480 | 2.115353e-59 | -8.615850e-47 |
| Msa0548420 | Msa1359520 | 0.810160 | 1.323548e-50 | -8.615850e-47 |
| Msa0561830 | Msa1359520 | 0.817352 | 3.448737e-52 | -8.615850e-47 |
| Msa0568920 | Msa1359520 | 0.805660 | 1.198861e-49 | -8.615850e-47 |
| Msa0572700 | Msa1359520 | 0.808112 | 3.634607e-50 | -8.615850e-47 |
| Msa0575950 | Msa1359520 | 0.846477 | 2.118989e-59 | -8.615850e-47 |
| Msa0579520 | Msa1359520 | 0.842853 | 2.006016e-58 | -8.615850e-47 |
| Msa0587730 | Msa1359520 | 0.814091 | 1.838195e-51 | -8.615850e-47 |
| Msa0587930 | Msa1359520 | 0.801278 | 9.709446e-49 | -8.615850e-47 |
| Msa0597800 | Msa1359520 | 0.853949 | 1.703796e-61 | -8.615850e-47 |
| Msa0597820 | Msa1359520 | 0.859127 | 5.126316e-63 | -8.615850e-47 |
| Msa0847140 | Msa1359520 | 0.811780 | 5.900203e-51 | -8.615850e-47 |
| Msa0854230 | Msa1359520 | 0.815608 | 8.471550e-52 | -8.615850e-47 |
| Msa0854860 | Msa1359520 | 0.807231 | 5.590760e-50 | -8.615850e-47 |
| Msa0855260 | Msa1359520 | 0.805005 | 1.644615e-49 | -8.615850e-47 |
| Msa0871420 | Msa1359520 | 0.804685 | 1.918392e-49 | -8.615850e-47 |
| Msa0874750 | Msa1359520 | 0.829194 | 5.900865e-55 | -8.615850e-47 |
| Msa0886370 | Msa1359520 | 0.818419 | 1.980081e-52 | -8.615850e-47 |
| Msa0904590 | Msa1359520 | 0.815072 | 1.114598e-51 | -8.615850e-47 |
| Msa0910560 | Msa1359520 | 0.814184 | 1.752953e-51 | -8.615850e-47 |
| Msa0910590 | Msa1359520 | 0.844961 | 5.463974e-59 | -8.615850e-47 |
| Msa0913500 | Msa1359520 | 0.823210 | 1.566047e-53 | -8.615850e-47 |
| Msa0921860 | Msa1359520 | 0.817535 | 3.135771e-52 | -8.615850e-47 |
| Msa0936630 | Msa1359520 | 0.823736 | 1.179386e-53 | -8.615850e-47 |
| Msa0937160 | Msa1359520 | -0.811463 | 6.912775e-51 | -8.615850e-47 |
| Msa0947420 | Msa1359520 | 0.814028 | 1.897786e-51 | -8.615850e-47 |
| Msa0948430 | Msa1359520 | 0.840592 | 7.923445e-58 | -8.615850e-47 |
| Msa0973850 | Msa1359520 | 0.813495 | 2.486447e-51 | -8.615850e-47 |
| Msa0974410 | Msa1359520 | -0.817367 | 3.420687e-52 | -8.615850e-47 |
| Msa0976400 | Msa1359520 | 0.808573 | 2.897779e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359520 | MtrunA17_Chr1g0149961 | 98.387 | 496 | 8 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1008 |
| Msa1359520 | MtrunA17_Chr4g0074171 | 90.121 | 496 | 49 | 0 | 1 | 496 | 1 | 496 | 0.0 | 940 |
| Msa1359520 | MtrunA17_Chr2g0310091 | 32.272 | 471 | 298 | 7 | 22 | 482 | 68 | 527 | 1.31e-71 | 237 |
| Msa1359520 | MtrunA17_Chr8g0365221 | 31.762 | 488 | 305 | 10 | 21 | 493 | 66 | 540 | 1.09e-60 | 208 |
| Msa1359520 | MtrunA17_Chr3g0118081 | 33.761 | 468 | 285 | 9 | 19 | 469 | 41 | 500 | 2.09e-60 | 207 |
| Msa1359520 | MtrunA17_Chr3g0118121 | 33.830 | 470 | 282 | 11 | 19 | 469 | 11 | 470 | 3.09e-59 | 203 |
| Msa1359520 | MtrunA17_Chr8g0390631 | 29.218 | 486 | 320 | 10 | 19 | 493 | 17 | 489 | 1.97e-57 | 198 |
| Msa1359520 | MtrunA17_Chr4g0059221 | 29.817 | 493 | 308 | 10 | 21 | 493 | 69 | 543 | 8.83e-55 | 192 |
| Msa1359520 | MtrunA17_Chr8g0390651 | 28.049 | 492 | 320 | 9 | 19 | 494 | 26 | 499 | 1.82e-54 | 190 |
| Msa1359520 | MtrunA17_Chr3g0117861 | 29.918 | 488 | 314 | 11 | 21 | 493 | 67 | 541 | 2.42e-53 | 188 |
| Msa1359520 | MtrunA17_Chr4g0059521 | 31.381 | 478 | 303 | 10 | 19 | 477 | 11 | 482 | 3.44e-53 | 187 |
| Msa1359520 | MtrunA17_Chr6g0485301 | 28.889 | 495 | 312 | 11 | 19 | 494 | 25 | 498 | 1.04e-52 | 186 |
| Msa1359520 | MtrunA17_Chr6g0485311 | 28.827 | 503 | 325 | 11 | 11 | 493 | 6 | 495 | 1.90e-52 | 185 |
| Msa1359520 | MtrunA17_Chr2g0279751 | 29.522 | 481 | 313 | 11 | 22 | 487 | 21 | 490 | 3.51e-47 | 171 |
| Msa1359520 | MtrunA17_Chr2g0294411 | 28.601 | 486 | 319 | 12 | 19 | 485 | 52 | 528 | 6.82e-46 | 169 |
| Msa1359520 | MtrunA17_Chr4g0049641 | 28.211 | 475 | 319 | 9 | 22 | 483 | 48 | 513 | 3.32e-44 | 163 |
| Msa1359520 | MtrunA17_Chr2g0300801 | 24.431 | 483 | 339 | 14 | 19 | 487 | 25 | 495 | 8.54e-30 | 122 |
| Msa1359520 | MtrunA17_Chr2g0328781 | 28.615 | 325 | 208 | 10 | 158 | 467 | 120 | 435 | 1.86e-24 | 106 |
| Msa1359520 | MtrunA17_Chr3g0124811 | 24.891 | 458 | 317 | 12 | 39 | 485 | 7 | 448 | 1.87e-23 | 103 |
| Msa1359520 | MtrunA17_Chr8g0384741 | 25.408 | 429 | 285 | 13 | 53 | 467 | 74 | 481 | 5.45e-23 | 102 |
| Msa1359520 | MtrunA17_Chr8g0372381 | 28.797 | 316 | 216 | 6 | 158 | 467 | 109 | 421 | 1.37e-21 | 97.8 |
| Msa1359520 | MtrunA17_Chr1g0159811 | 25.505 | 396 | 276 | 10 | 75 | 461 | 37 | 422 | 2.73e-19 | 90.5 |
| Msa1359520 | MtrunA17_Chr4g0032441 | 25.581 | 301 | 209 | 7 | 158 | 448 | 105 | 400 | 1.51e-12 | 69.7 |
| Msa1359520 | MtrunA17_Chr4g0060261 | 25.836 | 329 | 209 | 13 | 22 | 329 | 57 | 371 | 1.21e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359520 | AT2G24270.2 | 86.492 | 496 | 67 | 0 | 1 | 496 | 41 | 536 | 0.0 | 912 |
| Msa1359520 | AT2G24270.3 | 86.492 | 496 | 67 | 0 | 1 | 496 | 1 | 496 | 0.0 | 912 |
| Msa1359520 | AT2G24270.1 | 86.492 | 496 | 67 | 0 | 1 | 496 | 1 | 496 | 0.0 | 912 |
| Msa1359520 | AT2G24270.4 | 86.492 | 496 | 67 | 0 | 1 | 496 | 1 | 496 | 0.0 | 911 |
| Msa1359520 | AT1G74920.1 | 35.135 | 481 | 281 | 12 | 19 | 477 | 11 | 482 | 4.31e-69 | 229 |
| Msa1359520 | AT1G74920.2 | 34.927 | 481 | 277 | 13 | 19 | 477 | 11 | 477 | 1.27e-66 | 223 |
| Msa1359520 | AT1G79440.1 | 31.983 | 469 | 302 | 6 | 22 | 482 | 59 | 518 | 4.82e-66 | 222 |
| Msa1359520 | AT3G48170.1 | 31.667 | 480 | 299 | 11 | 19 | 477 | 11 | 482 | 2.37e-62 | 212 |
| Msa1359520 | AT3G48000.1 | 30.470 | 489 | 310 | 10 | 21 | 493 | 63 | 537 | 1.27e-58 | 202 |
| Msa1359520 | AT1G23800.1 | 30.435 | 483 | 316 | 9 | 22 | 493 | 60 | 533 | 3.34e-57 | 199 |
| Msa1359520 | AT3G24503.1 | 28.482 | 481 | 325 | 8 | 19 | 488 | 23 | 495 | 2.78e-53 | 187 |
| Msa1359520 | AT3G66658.1 | 28.016 | 489 | 311 | 13 | 11 | 467 | 31 | 510 | 4.61e-44 | 163 |
| Msa1359520 | AT2G14170.2 | 28.931 | 477 | 313 | 11 | 22 | 483 | 11 | 476 | 4.87e-44 | 162 |
| Msa1359520 | AT3G66658.2 | 28.016 | 489 | 311 | 13 | 11 | 467 | 31 | 510 | 1.00e-43 | 163 |
| Msa1359520 | AT2G14170.3 | 29.114 | 474 | 312 | 10 | 22 | 482 | 120 | 582 | 4.01e-43 | 161 |
| Msa1359520 | AT2G14170.1 | 28.931 | 477 | 313 | 11 | 22 | 483 | 120 | 585 | 4.26e-43 | 161 |
| Msa1359520 | AT1G23800.2 | 31.013 | 316 | 203 | 6 | 22 | 330 | 60 | 367 | 4.98e-34 | 133 |
| Msa1359520 | AT1G54100.2 | 24.224 | 483 | 340 | 12 | 19 | 487 | 24 | 494 | 1.86e-32 | 130 |
| Msa1359520 | AT1G54100.1 | 24.224 | 483 | 340 | 12 | 19 | 487 | 24 | 494 | 1.86e-32 | 130 |
| Msa1359520 | AT1G44170.3 | 27.044 | 318 | 221 | 8 | 158 | 468 | 49 | 362 | 2.29e-22 | 99.8 |
| Msa1359520 | AT1G44170.1 | 27.044 | 318 | 221 | 8 | 158 | 468 | 112 | 425 | 2.97e-22 | 100 |
| Msa1359520 | AT1G44170.2 | 27.044 | 318 | 221 | 8 | 158 | 468 | 112 | 425 | 2.97e-22 | 100 |
| Msa1359520 | AT4G34240.4 | 23.973 | 438 | 296 | 11 | 46 | 468 | 58 | 473 | 9.69e-20 | 92.8 |
| Msa1359520 | AT4G34240.1 | 23.973 | 438 | 296 | 11 | 46 | 468 | 73 | 488 | 1.27e-19 | 92.4 |
| Msa1359520 | AT4G34240.3 | 26.183 | 317 | 225 | 6 | 158 | 468 | 33 | 346 | 9.27e-19 | 89.0 |
| Msa1359520 | AT4G36250.1 | 26.935 | 323 | 216 | 10 | 158 | 467 | 108 | 423 | 8.60e-18 | 86.3 |
| Msa1359520 | AT5G62530.1 | 24.425 | 348 | 231 | 15 | 19 | 351 | 56 | 386 | 1.33e-12 | 70.5 |
| Msa1359520 | AT4G34240.2 | 26.415 | 265 | 166 | 9 | 71 | 322 | 92 | 340 | 7.74e-12 | 67.4 |
Find 133 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTAATGCAAGCAATTT+TGG | 0.134284 | tig0016715:+236089 | Msa1359520:CDS |
| ATACCTGGGTTGGTGGTTTA+AGG | 0.181685 | tig0016715:-234510 | None:intergenic |
| TTCCTTCCCTTCTGTATTCT+TGG | 0.223634 | tig0016715:-235947 | None:intergenic |
| TCTCGGAGAAGGAAAGTTTC+TGG | 0.263915 | tig0016715:+234249 | Msa1359520:CDS |
| TTTGAAACAGCTAGATTAAC+AGG | 0.291774 | tig0016715:-234451 | None:intergenic |
| ACGGAATTTATTCTGATAAC+AGG | 0.316059 | tig0016715:-236050 | None:intergenic |
| GGTTGTTAGATCAGGGGATT+TGG | 0.337868 | tig0016715:+234195 | Msa1359520:intron |
| GATTACTGTGGTCTTAATCT+TGG | 0.346129 | tig0016715:-237172 | None:intergenic |
| GGAAAATATTGCACCTGAAA+AGG | 0.346437 | tig0016715:-236774 | None:intergenic |
| TATATGTAGGTTGTTAGATC+AGG | 0.348615 | tig0016715:+234187 | Msa1359520:intron |
| AGGAGGACCGACAGTTAGTT+TGG | 0.359188 | tig0016715:-235826 | None:intergenic |
| TGAAGATGCTGACTTGGATT+TGG | 0.367579 | tig0016715:+235506 | Msa1359520:CDS |
| TTGCAGGGTTTGAAGGATAG+TGG | 0.372922 | tig0016715:+237108 | Msa1359520:intron |
| CACACAGCTTATAAGACCTT+TGG | 0.374357 | tig0016715:-234832 | None:intergenic |
| ACACAGCTTATAAGACCTTT+GGG | 0.375552 | tig0016715:-234831 | None:intergenic |
| ATTGCTCCAGCTCTTATTGC+TGG | 0.384524 | tig0016715:+234475 | Msa1359520:CDS |
| GAGGAAGGAGTTAGAATTCT+CGG | 0.389121 | tig0016715:+234232 | Msa1359520:CDS |
| TATGGTACATTGCTTTCATA+TGG | 0.390165 | tig0016715:+234800 | Msa1359520:CDS |
| AGATTAACAGGATAGTTAAA+AGG | 0.392708 | tig0016715:-234439 | None:intergenic |
| GTACATTGCTTTCATATGGC+TGG | 0.398669 | tig0016715:+234804 | Msa1359520:CDS |
| TATTTAGTTCTTTCATTGCC+TGG | 0.403493 | tig0016715:-234286 | None:intergenic |
| CTTTATTGAAGGGTTGGTAA+TGG | 0.403798 | tig0016715:+235896 | Msa1359520:CDS |
| GCCAACACCTTCTTATACAA+TGG | 0.407521 | tig0016715:+237200 | Msa1359520:CDS |
| TCCACTCCCTGCCATTTGCT+TGG | 0.418783 | tig0016715:-232983 | Msa1359510:intron |
| GGTTTGAAGGATAGTGGAAT+TGG | 0.422091 | tig0016715:+237114 | Msa1359520:CDS |
| TTAACAAGACACTCAGCAAT+AGG | 0.426100 | tig0016715:-233666 | Msa1359510:intron |
| ATGTACCTTGGACCTTGAAA+TGG | 0.428401 | tig0016715:-233119 | Msa1359510:intron |
| TATTGCTGAGTGTCTTGTTA+AGG | 0.430949 | tig0016715:+233668 | Msa1359520:CDS |
| ACATTAATCCTTAGTTTCAC+TGG | 0.432236 | tig0016715:+235396 | Msa1359520:intron |
| TGCAATGGTTCCTCTTCAAA+TGG | 0.433244 | tig0016715:+235452 | Msa1359520:CDS |
| TGATTTGTTGCAGGGTTTGA+AGG | 0.434669 | tig0016715:+237101 | Msa1359520:intron |
| TGCTAACTTTATTGAAGGGT+TGG | 0.434842 | tig0016715:+235890 | Msa1359520:CDS |
| CTGGTGGTTGGATTGATGAT+AGG | 0.435909 | tig0016715:-233090 | Msa1359510:intron |
| CCAACACCTTCTTATACAAT+GGG | 0.438581 | tig0016715:+237201 | Msa1359520:CDS |
| ATATTTGCAGAGATTATAGA+TGG | 0.438746 | tig0016715:+233006 | Msa1359520:CDS |
| GAAAATATTGCACCTGAAAA+GGG | 0.439932 | tig0016715:-236773 | None:intergenic |
| TCCTCTGCTAACTTTATTGA+AGG | 0.440983 | tig0016715:+235885 | Msa1359520:CDS |
| TACCTTATGCAGTTCACCCC+TGG | 0.448155 | tig0016715:-234897 | None:intergenic |
| TGAAAGGAGGGTTCTCCTAC+AGG | 0.449738 | tig0016715:+235544 | Msa1359520:CDS |
| TCAATTCAATTCCAAGCAAA+TGG | 0.450231 | tig0016715:+232972 | Msa1359520:exon |
| GACTTTCTTACAATGCATCC+AGG | 0.452616 | tig0016715:+234879 | Msa1359520:CDS |
| TACTTCAGTGACAGCATCCT+TGG | 0.455558 | tig0016715:-233706 | Msa1359510:intron |
| TTCAATTCCAAGCAAATGGC+AGG | 0.458328 | tig0016715:+232976 | Msa1359520:exon |
| ATTGAATTGATTATACACTT+TGG | 0.459555 | tig0016715:-232959 | Msa1359510:intron |
| ATAATGTTCGTTCCGATATG+AGG | 0.461487 | tig0016715:+235994 | Msa1359520:CDS |
| GTTCCGATATGAGGATATCA+TGG | 0.465033 | tig0016715:+236003 | Msa1359520:CDS |
| TGTTCTTGAAGATGCTGACT+TGG | 0.468639 | tig0016715:+235500 | Msa1359520:CDS |
| ATAAGCTGTGTGACAGGAAA+GGG | 0.469137 | tig0016715:+234843 | Msa1359520:CDS |
| TCAGTGACAGCATCCTTGGC+TGG | 0.470757 | tig0016715:-233702 | Msa1359510:intron |
| ATTCTGATAACAGGCAAAAC+CGG | 0.474825 | tig0016715:-236041 | None:intergenic |
| TGCTGTAGCTGCACTACATA+TGG | 0.475429 | tig0016715:+234782 | Msa1359520:CDS |
| AGAATAAATTCCGTCGAAGA+AGG | 0.485859 | tig0016715:+236059 | Msa1359520:CDS |
| ACCTGAAAAGGGAAGTGATC+AGG | 0.486864 | tig0016715:-236762 | None:intergenic |
| TTCCCATGATATCCTCATAT+CGG | 0.487401 | tig0016715:-236006 | None:intergenic |
| AAGTGGAACAAATCCTCCTC+TGG | 0.487476 | tig0016715:+233057 | Msa1359520:CDS |
| ATATGTAGGTTGTTAGATCA+GGG | 0.488532 | tig0016715:+234188 | Msa1359520:intron |
| TATGGGCTAAAACTCCACTT+TGG | 0.488875 | tig0016715:+233589 | Msa1359520:CDS |
| GGTTGCTTTAGTCATGGAAT+CGG | 0.489106 | tig0016715:+235764 | Msa1359520:CDS |
| ATCCAGGGGTGAACTGCATA+AGG | 0.490005 | tig0016715:+234895 | Msa1359520:CDS |
| ATATCATGGGAAGAACCATT+TGG | 0.490103 | tig0016715:+236017 | Msa1359520:CDS |
| ACAGGCAAAACCGGTCCAAA+TGG | 0.493625 | tig0016715:-236032 | None:intergenic |
| AGTTTCACTGGTGGGGACAC+TGG | 0.494684 | tig0016715:+235408 | Msa1359520:intron |
| GGTCTTATAAGCTGTGTGAC+AGG | 0.497203 | tig0016715:+234837 | Msa1359520:CDS |
| TCAAAGATGCACAGCAGTAA+AGG | 0.504769 | tig0016715:+235743 | Msa1359520:CDS |
| TCCAAGCAAATGGCAGGGAG+TGG | 0.506297 | tig0016715:+232982 | Msa1359520:exon |
| ACAGGAAAGGGTTCTGAGAT+TGG | 0.507660 | tig0016715:+234855 | Msa1359520:CDS |
| CCACCAAGCTCCATTTGAAG+AGG | 0.508608 | tig0016715:-235462 | None:intergenic |
| GTTCCTCTTCAAATGGAGCT+TGG | 0.511297 | tig0016715:+235459 | Msa1359520:CDS |
| GTGATGTCGCAGTCATCCTC+AGG | 0.511676 | tig0016715:-235846 | None:intergenic |
| CAAGGCTGCAGCAATATTGA+AGG | 0.514089 | tig0016715:+233632 | Msa1359520:CDS |
| ATAAGCGATGCAATGGAGAC+AGG | 0.514767 | tig0016715:+236705 | Msa1359520:CDS |
| CCTCTTCAAATGGAGCTTGG+TGG | 0.517151 | tig0016715:+235462 | Msa1359520:CDS |
| ACTACTATGCAGATGGGAAG+TGG | 0.523545 | tig0016715:+233040 | Msa1359520:CDS |
| AAGTGATCAGGTCCGCGAGC+TGG | 0.523854 | tig0016715:-236750 | None:intergenic |
| AACAGCTTGTACACAGGAAG+AGG | 0.524957 | tig0016715:+233527 | Msa1359520:intron |
| GCTTTCAACTACTATGCAGA+TGG | 0.527011 | tig0016715:+233033 | Msa1359520:CDS |
| GGTCATCATGTTAATACTGT+TGG | 0.527504 | tig0016715:-237151 | None:intergenic |
| TAAATACTGTCTCACTTCAA+AGG | 0.527755 | tig0016715:+234303 | Msa1359520:CDS |
| AATCCTTAGTTTCACTGGTG+GGG | 0.528272 | tig0016715:+235401 | Msa1359520:intron |
| AAAGAAAATCAAGGATAAAG+TGG | 0.530683 | tig0016715:+235803 | Msa1359520:CDS |
| TGCCAAGAATACAGAAGGGA+AGG | 0.531745 | tig0016715:+235945 | Msa1359520:CDS |
| ATGGGAAGAACCATTTGGAC+CGG | 0.532169 | tig0016715:+236022 | Msa1359520:CDS |
| GTAATGGATGCTAAGAAGAA+AGG | 0.533888 | tig0016715:+235912 | Msa1359520:CDS |
| CATACTTGTAAAGAAAATCA+AGG | 0.535139 | tig0016715:+235794 | Msa1359520:CDS |
| GAAGGGAAGGAAATCTCATA+TGG | 0.535932 | tig0016715:+235958 | Msa1359520:CDS |
| TAATCCTTAGTTTCACTGGT+GGG | 0.536871 | tig0016715:+235400 | Msa1359520:intron |
| CCTCTGCTAACTTTATTGAA+GGG | 0.538814 | tig0016715:+235886 | Msa1359520:CDS |
| ACTTTCTTACAATGCATCCA+GGG | 0.540072 | tig0016715:+234880 | Msa1359520:CDS |
| TCTTATCCCATTGTATAAGA+AGG | 0.542086 | tig0016715:-237207 | None:intergenic |
| CATATGGCTGGCTTCCCCAA+AGG | 0.543018 | tig0016715:+234816 | Msa1359520:CDS |
| TAGTTGTATACCTGGGTTGG+TGG | 0.543473 | tig0016715:-234517 | None:intergenic |
| GAGTTTCCAGCAATAAGAGC+TGG | 0.549640 | tig0016715:-234481 | None:intergenic |
| CAAAATTGCTTGCATTACAA+TGG | 0.559581 | tig0016715:-236088 | None:intergenic |
| GTGTCATATTGTGCAGAGGA+AGG | 0.561191 | tig0016715:+234217 | Msa1359520:CDS |
| CCCATTGTATAAGAAGGTGT+TGG | 0.561818 | tig0016715:-237201 | None:intergenic |
| TATAAGCTGTGTGACAGGAA+AGG | 0.564453 | tig0016715:+234842 | Msa1359520:CDS |
| TAACAGGATAGTTAAAAGGC+GGG | 0.565103 | tig0016715:-234435 | None:intergenic |
| GATAGTGGAATTGGTTCTCA+AGG | 0.566426 | tig0016715:+237123 | Msa1359520:CDS |
| GTAGCTGCTAACATTGTGAA+AGG | 0.567909 | tig0016715:+235528 | Msa1359520:CDS |
| AAAATCCATTTCAAGGTCCA+AGG | 0.568430 | tig0016715:+233114 | Msa1359520:CDS |
| GGTTGGTGGTTTAAGGACAA+TGG | 0.570050 | tig0016715:-234503 | None:intergenic |
| CGAACATTATCCAACAAAAG+TGG | 0.572392 | tig0016715:-235981 | None:intergenic |
| CTTTCAACTACTATGCAGAT+GGG | 0.575718 | tig0016715:+233034 | Msa1359520:CDS |
| GGAGTTAGAATTCTCGGAGA+AGG | 0.577933 | tig0016715:+234238 | Msa1359520:CDS |
| TTGTGTGTGCAGATTCCACT+CGG | 0.578498 | tig0016715:+234397 | Msa1359520:intron |
| AGTAAAGGTTGCTTTAGTCA+TGG | 0.579116 | tig0016715:+235758 | Msa1359520:CDS |
| GCAGAGGATTCTGTGATGAC+CGG | 0.579247 | tig0016715:-235870 | None:intergenic |
| ATGGCGAATTCCTTCTTCGA+CGG | 0.589654 | tig0016715:-236069 | None:intergenic |
| CTGCTAACATTGTGAAAGGA+GGG | 0.598823 | tig0016715:+235532 | Msa1359520:CDS |
| TTAATCCTTAGTTTCACTGG+TGG | 0.600395 | tig0016715:+235399 | Msa1359520:intron |
| CCCTTCAATAAAGTTAGCAG+AGG | 0.600576 | tig0016715:-235886 | None:intergenic |
| GGAGATTGCAAAACCAGCCA+AGG | 0.600790 | tig0016715:+233689 | Msa1359520:CDS |
| AATATCAAAGAAGTCTGCAA+TGG | 0.609417 | tig0016715:+235437 | Msa1359520:CDS |
| GCTGCTAACATTGTGAAAGG+AGG | 0.613573 | tig0016715:+235531 | Msa1359520:CDS |
| TGTCCTTAAACCACCAACCC+AGG | 0.614373 | tig0016715:+234507 | Msa1359520:CDS |
| TTCCGATATGAGGATATCAT+GGG | 0.614684 | tig0016715:+236004 | Msa1359520:CDS |
| GAATAGTTGTATACCTGGGT+TGG | 0.619472 | tig0016715:-234520 | None:intergenic |
| TATGTAGGTTGTTAGATCAG+GGG | 0.620747 | tig0016715:+234189 | Msa1359520:intron |
| AATGTTGATAAGCGATGCAA+TGG | 0.626313 | tig0016715:+236698 | Msa1359520:CDS |
| AGGATAGTTAAAAGGCGGGA+TGG | 0.627333 | tig0016715:-234431 | None:intergenic |
| ATCAATTCAGCACCAGCTCG+CGG | 0.632640 | tig0016715:+236738 | Msa1359520:CDS |
| AAGAGCAGAGTTGCTTCACA+AGG | 0.641127 | tig0016715:+233614 | Msa1359520:CDS |
| TTAACAGGATAGTTAAAAGG+CGG | 0.641435 | tig0016715:-234436 | None:intergenic |
| ACTAACTGTCGGTCCTCCTG+AGG | 0.641509 | tig0016715:+235830 | Msa1359520:CDS |
| TTTGGTGTCATATTGTGCAG+AGG | 0.648388 | tig0016715:+234213 | Msa1359520:CDS |
| TCAATTCCAAGCAAATGGCA+GGG | 0.650436 | tig0016715:+232977 | Msa1359520:exon |
| CTTTCTTACAATGCATCCAG+GGG | 0.660682 | tig0016715:+234881 | Msa1359520:CDS |
| AAAGTGGCCAAACTAACTGT+CGG | 0.661745 | tig0016715:+235819 | Msa1359520:CDS |
| CACAGCTTATAAGACCTTTG+GGG | 0.662828 | tig0016715:-234830 | None:intergenic |
| ATGTCGCAGTCATCCTCAGG+AGG | 0.676524 | tig0016715:-235843 | None:intergenic |
| ATGGCTAAAACAACTCCGAG+TGG | 0.678221 | tig0016715:-234412 | None:intergenic |
| GGATGACTGCGACATCACAC+CGG | 0.698931 | tig0016715:+235851 | Msa1359520:CDS |
| TGTTGGCAAGTTGATTACTG+TGG | 0.718041 | tig0016715:-237184 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAATAATATATATCA+TGG | + | tig0016715:233423-233442 | Msa1359520:intron | 10.0% |
| !!! | TTAACTTTTCATTTATTTAA+TGG | + | tig0016715:233741-233760 | Msa1359520:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | tig0016715:236382-236401 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | tig0016715:236383-236402 | None:intergenic | 10.0% |
| !!! | TAAAATCATATTTTTTGTTT+TGG | - | tig0016715:236526-236545 | None:intergenic | 10.0% |
| !! | TAAGGAATATATATATAATT+AGG | - | tig0016715:236848-236867 | None:intergenic | 10.0% |
| !!! | ATTGAAAGTAAATTTTGATT+GGG | - | tig0016715:233176-233195 | Msa1359510:intron | 15.0% |
| !!! | TTACAATTTTTTTTACTATC+TGG | + | tig0016715:233475-233494 | Msa1359520:intron | 15.0% |
| !!! | AATTTATAATTTGTTGTGTT+CGG | + | tig0016715:233829-233848 | Msa1359520:intron | 15.0% |
| !! | TATAGTTATTATGATGTATA+TGG | - | tig0016715:234551-234570 | None:intergenic | 15.0% |
| !! | AATCTAACTAATCTAATTAA+TGG | + | tig0016715:234654-234673 | Msa1359520:intron | 15.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | tig0016715:236317-236336 | None:intergenic | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | tig0016715:236318-236337 | None:intergenic | 15.0% |
| !! | AAAATGGAATATATTGAATT+GGG | - | tig0016715:236358-236377 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | tig0016715:236381-236400 | None:intergenic | 15.0% |
| !! | ATTGAATTGATTATACACTT+TGG | - | tig0016715:232962-232981 | Msa1359510:intron | 20.0% |
| !!! | GATTGAAAGTAAATTTTGAT+TGG | - | tig0016715:233177-233196 | Msa1359510:intron | 20.0% |
| !!! | TGTTGCTGATTTTTTTTTAA+AGG | + | tig0016715:233450-233469 | Msa1359520:intron | 20.0% |
| !! | AAAAGTTGCTCAAAAATTAT+GGG | + | tig0016715:233572-233591 | Msa1359520:CDS | 20.0% |
| !! | TAATATGTAACAATTGCATT+CGG | - | tig0016715:234681-234700 | None:intergenic | 20.0% |
| !! | TACCAAATGTATTATGAATA+GGG | + | tig0016715:234759-234778 | Msa1359520:intron | 20.0% |
| !! | TAATAAAACCAAAACAAAAG+TGG | - | tig0016715:234960-234979 | None:intergenic | 20.0% |
| !! | TTAAAAAATTCTTACTAGAG+AGG | + | tig0016715:235334-235353 | Msa1359520:intron | 20.0% |
| !!! | GACACTTTTTTTTAGTAAAT+GGG | - | tig0016715:236248-236267 | None:intergenic | 20.0% |
| !! | GAAAATGGAATATATTGAAT+TGG | - | tig0016715:236359-236378 | None:intergenic | 20.0% |
| !! | TAGGAAGAAAAAAAATTCAA+AGG | + | tig0016715:236877-236896 | Msa1359520:intron | 20.0% |
| !! | TTTCATATCTATTCTTAACA+AGG | - | tig0016715:237005-237024 | None:intergenic | 20.0% |
| ! | ATATTTGCAGAGATTATAGA+TGG | + | tig0016715:233006-233025 | Msa1359520:CDS | 25.0% |
| ! | ATATAATATGTCATGTACCT+TGG | - | tig0016715:233134-233153 | Msa1359510:intron | 25.0% |
| ! | TTTCAATCTTTACTCTTTAC+CGG | + | tig0016715:233189-233208 | Msa1359520:intron | 25.0% |
| ! | TAGACTTATTGATCAAATAG+TGG | - | tig0016715:233269-233288 | Msa1359510:intron | 25.0% |
| ! | TTGATCAATAAGTCTAACTA+TGG | + | tig0016715:233273-233292 | Msa1359520:intron | 25.0% |
| !! | AACATGATATCAATTAGTCT+TGG | - | tig0016715:233359-233378 | Msa1359510:intron | 25.0% |
| ! | CAAAAGTTGCTCAAAAATTA+TGG | + | tig0016715:233571-233590 | Msa1359520:CDS | 25.0% |
| !! | CATCAATATTTTGTATTCGA+TGG | + | tig0016715:233905-233924 | Msa1359520:intron | 25.0% |
| ! | TTTCAATATTCTTGATGTTG+CGG | + | tig0016715:233962-233981 | Msa1359520:intron | 25.0% |
| ! | AGATTAACAGGATAGTTAAA+AGG | - | tig0016715:234442-234461 | None:intergenic | 25.0% |
| ! | GTACCAAATGTATTATGAAT+AGG | + | tig0016715:234758-234777 | Msa1359520:intron | 25.0% |
| ! | TAAGGTAATATTCACTTCTT+CGG | + | tig0016715:234913-234932 | Msa1359520:intron | 25.0% |
| !!! | ATTATTGTCCACTTTTGTTT+TGG | + | tig0016715:234949-234968 | Msa1359520:intron | 25.0% |
| !! | GTCTTTTGTTAGCAATTTTA+CGG | + | tig0016715:235083-235102 | Msa1359520:intron | 25.0% |
| !! | TTTTGTAAGTTTGATACACT+CGG | + | tig0016715:235175-235194 | Msa1359520:intron | 25.0% |
| ! | TACCATCATTATTATCTACT+CGG | + | tig0016715:235587-235606 | Msa1359520:intron | 25.0% |
| ! | GTTATGAAATCAAGAAAATG+TGG | - | tig0016715:235655-235674 | None:intergenic | 25.0% |
| !! | ATTTTCTTTTGATATGTCAG+TGG | + | tig0016715:235720-235739 | Msa1359520:intron | 25.0% |
| ! | CATACTTGTAAAGAAAATCA+AGG | + | tig0016715:235794-235813 | Msa1359520:CDS | 25.0% |
| ! | AAAGAAAATCAAGGATAAAG+TGG | + | tig0016715:235803-235822 | Msa1359520:CDS | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | - | tig0016715:236249-236268 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | tig0016715:236270-236289 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | tig0016715:236271-236290 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | tig0016715:236374-236393 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTGGAGAGAA+TGG | - | tig0016715:236517-236536 | None:intergenic | 25.0% |
| !! | AACGGCATTAATATTTTTCA+GGG | + | tig0016715:236600-236619 | Msa1359520:intron | 25.0% |
| !!! | TATTTTATTTTGCATGACAC+AGG | + | tig0016715:236644-236663 | Msa1359520:intron | 25.0% |
| !!! | ATTTTATTTTGCATGACACA+GGG | + | tig0016715:236645-236664 | Msa1359520:intron | 25.0% |
| !!! | TTCGAAGGTATGAAATTTTA+TGG | - | tig0016715:236818-236837 | None:intergenic | 25.0% |
| !! | ATATTCCTTAAGTTGTTCTT+AGG | + | tig0016715:236858-236877 | Msa1359520:intron | 25.0% |
| ! | AATATGTTCATAAATCTGCA+TGG | - | tig0016715:237028-237047 | None:intergenic | 25.0% |
| TCAATTCAATTCCAAGCAAA+TGG | + | tig0016715:232972-232991 | Msa1359520:exon | 30.0% | |
| !!! | AGTAAATTTTGATTGGGTGA+GGG | - | tig0016715:233170-233189 | Msa1359510:intron | 30.0% |
| !!! | AAGTAAATTTTGATTGGGTG+AGG | - | tig0016715:233171-233190 | Msa1359510:intron | 30.0% |
| TCACTTGTGCATTATAGAAT+TGG | - | tig0016715:233215-233234 | Msa1359510:intron | 30.0% | |
| TGTGTGAGTTATTGATCTAA+TGG | + | tig0016715:233310-233329 | Msa1359520:intron | 30.0% | |
| !!! | TGTACAAGCTGTTTTTCATT+TGG | - | tig0016715:233520-233539 | Msa1359510:intron | 30.0% |
| !!! | TGCACAAGGTTTTGAAATTT+CGG | + | tig0016715:233936-233955 | Msa1359520:intron | 30.0% |
| TAAATATGTTCACGACGTAA+AGG | - | tig0016715:234046-234065 | None:intergenic | 30.0% | |
| CCAAATCTAAGAAACAATAG+AGG | - | tig0016715:234092-234111 | None:intergenic | 30.0% | |
| ! | CCTCTATTGTTTCTTAGATT+TGG | + | tig0016715:234089-234108 | Msa1359520:intron | 30.0% |
| ! | GCTACGACTTTTATATATGT+AGG | + | tig0016715:234174-234193 | Msa1359520:intron | 30.0% |
| TATATGTAGGTTGTTAGATC+AGG | + | tig0016715:234187-234206 | Msa1359520:intron | 30.0% | |
| ATATGTAGGTTGTTAGATCA+GGG | + | tig0016715:234188-234207 | Msa1359520:intron | 30.0% | |
| !! | TATTTAGTTCTTTCATTGCC+TGG | - | tig0016715:234289-234308 | None:intergenic | 30.0% |
| TAAATACTGTCTCACTTCAA+AGG | + | tig0016715:234303-234322 | Msa1359520:CDS | 30.0% | |
| ATAACTATGTAAGAACAGAC+AGG | - | tig0016715:234339-234358 | None:intergenic | 30.0% | |
| TTAACAGGATAGTTAAAAGG+CGG | - | tig0016715:234439-234458 | None:intergenic | 30.0% | |
| ! | TTTGAAACAGCTAGATTAAC+AGG | - | tig0016715:234454-234473 | None:intergenic | 30.0% |
| CTATGAATAGTTGTATACCT+GGG | - | tig0016715:234527-234546 | None:intergenic | 30.0% | |
| TCTATGAATAGTTGTATACC+TGG | - | tig0016715:234528-234547 | None:intergenic | 30.0% | |
| CACCCTATTCATAATACATT+TGG | - | tig0016715:234764-234783 | None:intergenic | 30.0% | |
| TATGGTACATTGCTTTCATA+TGG | + | tig0016715:234800-234819 | Msa1359520:CDS | 30.0% | |
| ! | TTCAGAGTAAACCATCATTT+TGG | + | tig0016715:234988-235007 | Msa1359520:intron | 30.0% |
| ACCAACAAAAGACAAATATG+AGG | + | tig0016715:235147-235166 | Msa1359520:intron | 30.0% | |
| ! | ACCTCATATTTGTCTTTTGT+TGG | - | tig0016715:235151-235170 | None:intergenic | 30.0% |
| TTTGTAAGTTTGATACACTC+GGG | + | tig0016715:235176-235195 | Msa1359520:intron | 30.0% | |
| ACATTAATCCTTAGTTTCAC+TGG | + | tig0016715:235396-235415 | Msa1359520:intron | 30.0% | |
| AATATCAAAGAAGTCTGCAA+TGG | + | tig0016715:235437-235456 | Msa1359520:CDS | 30.0% | |
| ACCATCATTATTATCTACTC+GGG | + | tig0016715:235588-235607 | Msa1359520:intron | 30.0% | |
| ! | ATTTTGCCAAGAATACAGAA+GGG | + | tig0016715:235941-235960 | Msa1359520:CDS | 30.0% |
| ACGGAATTTATTCTGATAAC+AGG | - | tig0016715:236053-236072 | None:intergenic | 30.0% | |
| CAAAATTGCTTGCATTACAA+TGG | - | tig0016715:236091-236110 | None:intergenic | 30.0% | |
| ! | CATTGTAATGCAAGCAATTT+TGG | + | tig0016715:236089-236108 | Msa1359520:CDS | 30.0% |
| AAAACAATTAGCACCATCAT+AGG | + | tig0016715:236168-236187 | Msa1359520:intron | 30.0% | |
| ! | GAACGGCATTAATATTTTTC+AGG | + | tig0016715:236599-236618 | Msa1359520:intron | 30.0% |
| !!! | TTTTATTTTGCATGACACAG+GGG | + | tig0016715:236646-236665 | Msa1359520:intron | 30.0% |
| GAAAATATTGCACCTGAAAA+GGG | - | tig0016715:236776-236795 | None:intergenic | 30.0% | |
| TAATTAGGATTGAAGTTCGA+AGG | - | tig0016715:236833-236852 | None:intergenic | 30.0% | |
| TTCTTCCTAAGAACAACTTA+AGG | - | tig0016715:236866-236885 | None:intergenic | 30.0% | |
| GTAGCTGCAATTTAATATCT+TGG | - | tig0016715:236953-236972 | None:intergenic | 30.0% | |
| CTTTCAACTACTATGCAGAT+GGG | + | tig0016715:233034-233053 | Msa1359520:CDS | 35.0% | |
| ! | GATAGGAACAAATTTTCCAG+AGG | - | tig0016715:233076-233095 | Msa1359510:intron | 35.0% |
| !! | AAATGGATTTTTCTGGTGGT+TGG | - | tig0016715:233105-233124 | Msa1359510:intron | 35.0% |
| !! | CTTGAAATGGATTTTTCTGG+TGG | - | tig0016715:233109-233128 | Msa1359510:intron | 35.0% |
| CACCAGAAAAATCCATTTCA+AGG | + | tig0016715:233107-233126 | Msa1359520:CDS | 35.0% | |
| !! | GACCTTGAAATGGATTTTTC+TGG | - | tig0016715:233112-233131 | Msa1359510:intron | 35.0% |
| AAAATCCATTTCAAGGTCCA+AGG | + | tig0016715:233114-233133 | Msa1359520:CDS | 35.0% | |
| TTGTGCATTATAGAATTGGC+CGG | - | tig0016715:233211-233230 | Msa1359510:intron | 35.0% | |
| ATGAAAAACAGCTTGTACAC+AGG | + | tig0016715:233521-233540 | Msa1359520:intron | 35.0% | |
| !!! | AGCAACTTTTGCTGATTCTA+TGG | - | tig0016715:233562-233581 | Msa1359510:intron | 35.0% |
| TTAACAAGACACTCAGCAAT+AGG | - | tig0016715:233669-233688 | Msa1359510:intron | 35.0% | |
| ! | TATTGCTGAGTGTCTTGTTA+AGG | + | tig0016715:233668-233687 | Msa1359520:CDS | 35.0% |
| CTTGATGTTGCGGAAAATTA+TGG | + | tig0016715:233972-233991 | Msa1359520:intron | 35.0% | |
| CGTGAACATATTTACAGTTG+CGG | + | tig0016715:234052-234071 | Msa1359520:intron | 35.0% | |
| TATGTAGGTTGTTAGATCAG+GGG | + | tig0016715:234189-234208 | Msa1359520:intron | 35.0% | |
| TAACAGGATAGTTAAAAGGC+GGG | - | tig0016715:234438-234457 | None:intergenic | 35.0% | |
| ACACAGCTTATAAGACCTTT+GGG | - | tig0016715:234834-234853 | None:intergenic | 35.0% | |
| ACTTTCTTACAATGCATCCA+GGG | + | tig0016715:234880-234899 | Msa1359520:CDS | 35.0% | |
| !! | CATTTTAGGGACCAAAATGA+TGG | - | tig0016715:235002-235021 | None:intergenic | 35.0% |
| TTGTAAGTTTGATACACTCG+GGG | + | tig0016715:235177-235196 | Msa1359520:intron | 35.0% | |
| !!! | TTTTAGTTCTTGAGTGTGTG+AGG | - | tig0016715:235218-235237 | None:intergenic | 35.0% |
| TAGTTACAACTTCCAACAAG+AGG | + | tig0016715:235247-235266 | Msa1359520:intron | 35.0% | |
| TTAATCCTTAGTTTCACTGG+TGG | + | tig0016715:235399-235418 | Msa1359520:intron | 35.0% | |
| TAATCCTTAGTTTCACTGGT+GGG | + | tig0016715:235400-235419 | Msa1359520:intron | 35.0% | |
| ACCCGAGTAGATAATAATGA+TGG | - | tig0016715:235592-235611 | None:intergenic | 35.0% | |
| ! | AGTAAAGGTTGCTTTAGTCA+TGG | + | tig0016715:235758-235777 | Msa1359520:CDS | 35.0% |
| TCCTCTGCTAACTTTATTGA+AGG | + | tig0016715:235885-235904 | Msa1359520:CDS | 35.0% | |
| CCTCTGCTAACTTTATTGAA+GGG | + | tig0016715:235886-235905 | Msa1359520:CDS | 35.0% | |
| TGCTAACTTTATTGAAGGGT+TGG | + | tig0016715:235890-235909 | Msa1359520:CDS | 35.0% | |
| !! | CTTTATTGAAGGGTTGGTAA+TGG | + | tig0016715:235896-235915 | Msa1359520:CDS | 35.0% |
| !! | GTAATGGATGCTAAGAAGAA+AGG | + | tig0016715:235912-235931 | Msa1359520:CDS | 35.0% |
| ! | CATTTTGCCAAGAATACAGA+AGG | + | tig0016715:235940-235959 | Msa1359520:CDS | 35.0% |
| CGAACATTATCCAACAAAAG+TGG | - | tig0016715:235984-236003 | None:intergenic | 35.0% | |
| ATAATGTTCGTTCCGATATG+AGG | + | tig0016715:235994-236013 | Msa1359520:CDS | 35.0% | |
| TTCCGATATGAGGATATCAT+GGG | + | tig0016715:236004-236023 | Msa1359520:CDS | 35.0% | |
| TTCCCATGATATCCTCATAT+CGG | - | tig0016715:236009-236028 | None:intergenic | 35.0% | |
| ATATCATGGGAAGAACCATT+TGG | + | tig0016715:236017-236036 | Msa1359520:CDS | 35.0% | |
| ATTCTGATAACAGGCAAAAC+CGG | - | tig0016715:236044-236063 | None:intergenic | 35.0% | |
| AGAATAAATTCCGTCGAAGA+AGG | + | tig0016715:236059-236078 | Msa1359520:CDS | 35.0% | |
| TTAGCACCATCATAGGAAAA+AGG | + | tig0016715:236175-236194 | Msa1359520:intron | 35.0% | |
| AGTAAATGGGTCAGATATTC+CGG | - | tig0016715:236235-236254 | None:intergenic | 35.0% | |
| CCAAACTAGCTCATATATTC+CGG | + | tig0016715:236417-236436 | Msa1359520:intron | 35.0% | |
| CAAACTAGCTCATATATTCC+GGG | + | tig0016715:236418-236437 | Msa1359520:intron | 35.0% | |
| ! | AATGTTGATAAGCGATGCAA+TGG | + | tig0016715:236698-236717 | Msa1359520:CDS | 35.0% |
| GGAAAATATTGCACCTGAAA+AGG | - | tig0016715:236777-236796 | None:intergenic | 35.0% | |
| TTTATGGCAACTTAGCAAGA+TGG | - | tig0016715:236802-236821 | None:intergenic | 35.0% | |
| GCTGCAATTTAATATCTTGG+TGG | - | tig0016715:236950-236969 | None:intergenic | 35.0% | |
| ATACTTTGGCAGTTTAGACA+TGG | - | tig0016715:237082-237101 | None:intergenic | 35.0% | |
| !! | CCAAAGTATGATTTGTTGCA+GGG | + | tig0016715:237093-237112 | Msa1359520:intron | 35.0% |
| GGTCATCATGTTAATACTGT+TGG | - | tig0016715:237154-237173 | None:intergenic | 35.0% | |
| ! | GATTACTGTGGTCTTAATCT+TGG | - | tig0016715:237175-237194 | None:intergenic | 35.0% |
| CCAACACCTTCTTATACAAT+GGG | + | tig0016715:237201-237220 | Msa1359520:CDS | 35.0% | |
| TTCAATTCCAAGCAAATGGC+AGG | + | tig0016715:232976-232995 | Msa1359520:exon | 40.0% | |
| TCAATTCCAAGCAAATGGCA+GGG | + | tig0016715:232977-232996 | Msa1359520:exon | 40.0% | |
| GCTTTCAACTACTATGCAGA+TGG | + | tig0016715:233033-233052 | Msa1359520:CDS | 40.0% | |
| ! | AGGAACAAATTTTCCAGAGG+AGG | - | tig0016715:233073-233092 | Msa1359510:intron | 40.0% |
| ATGTACCTTGGACCTTGAAA+TGG | - | tig0016715:233122-233141 | Msa1359510:intron | 40.0% | |
| TTGATTGGGTGAGGGAAAAA+GGG | - | tig0016715:233162-233181 | Msa1359510:intron | 40.0% | |
| TTTGATTGGGTGAGGGAAAA+AGG | - | tig0016715:233163-233182 | Msa1359510:intron | 40.0% | |
| ! | TATGGGCTAAAACTCCACTT+TGG | + | tig0016715:233589-233608 | Msa1359520:CDS | 40.0% |
| ! | AACTCTGCTCTTTTCCAAAG+TGG | - | tig0016715:233606-233625 | Msa1359510:intron | 40.0% |
| !! | TTTGGTGTCATATTGTGCAG+AGG | + | tig0016715:234213-234232 | Msa1359520:CDS | 40.0% |
| GAGGAAGGAGTTAGAATTCT+CGG | + | tig0016715:234232-234251 | Msa1359520:CDS | 40.0% | |
| GAATAGTTGTATACCTGGGT+TGG | - | tig0016715:234523-234542 | None:intergenic | 40.0% | |
| GTACATTGCTTTCATATGGC+TGG | + | tig0016715:234804-234823 | Msa1359520:CDS | 40.0% | |
| CACAGCTTATAAGACCTTTG+GGG | - | tig0016715:234833-234852 | None:intergenic | 40.0% | |
| CACACAGCTTATAAGACCTT+TGG | - | tig0016715:234835-234854 | None:intergenic | 40.0% | |
| TATAAGCTGTGTGACAGGAA+AGG | + | tig0016715:234842-234861 | Msa1359520:CDS | 40.0% | |
| ATAAGCTGTGTGACAGGAAA+GGG | + | tig0016715:234843-234862 | Msa1359520:CDS | 40.0% | |
| GACTTTCTTACAATGCATCC+AGG | + | tig0016715:234879-234898 | Msa1359520:CDS | 40.0% | |
| CTTTCTTACAATGCATCCAG+GGG | + | tig0016715:234881-234900 | Msa1359520:CDS | 40.0% | |
| TTTGGTCCCTAAAATGTGTG+AGG | + | tig0016715:235006-235025 | Msa1359520:intron | 40.0% | |
| ! | ACACTGCCTCACACATTTTA+GGG | - | tig0016715:235015-235034 | None:intergenic | 40.0% |
| GCTAACAAAAGACACACTCA+AGG | - | tig0016715:235076-235095 | None:intergenic | 40.0% | |
| AATCCTTAGTTTCACTGGTG+GGG | + | tig0016715:235401-235420 | Msa1359520:intron | 40.0% | |
| TGCAATGGTTCCTCTTCAAA+TGG | + | tig0016715:235452-235471 | Msa1359520:CDS | 40.0% | |
| ! | TGTTCTTGAAGATGCTGACT+TGG | + | tig0016715:235500-235519 | Msa1359520:CDS | 40.0% |
| !! | TGAAGATGCTGACTTGGATT+TGG | + | tig0016715:235506-235525 | Msa1359520:CDS | 40.0% |
| GTAGCTGCTAACATTGTGAA+AGG | + | tig0016715:235528-235547 | Msa1359520:CDS | 40.0% | |
| CTGCTAACATTGTGAAAGGA+GGG | + | tig0016715:235532-235551 | Msa1359520:CDS | 40.0% | |
| ! | TATGTGCTACTGTTACCTGT+AGG | - | tig0016715:235562-235581 | None:intergenic | 40.0% |
| TCAAAGATGCACAGCAGTAA+AGG | + | tig0016715:235743-235762 | Msa1359520:CDS | 40.0% | |
| ! | GGTTGCTTTAGTCATGGAAT+CGG | + | tig0016715:235764-235783 | Msa1359520:CDS | 40.0% |
| AAAGTGGCCAAACTAACTGT+CGG | + | tig0016715:235819-235838 | Msa1359520:CDS | 40.0% | |
| CCCTTCAATAAAGTTAGCAG+AGG | - | tig0016715:235889-235908 | None:intergenic | 40.0% | |
| TTCCTTCCCTTCTGTATTCT+TGG | - | tig0016715:235950-235969 | None:intergenic | 40.0% | |
| GAAGGGAAGGAAATCTCATA+TGG | + | tig0016715:235958-235977 | Msa1359520:CDS | 40.0% | |
| !!! | TCTCATATGGCCACTTTTGT+TGG | + | tig0016715:235971-235990 | Msa1359520:CDS | 40.0% |
| GTTCCGATATGAGGATATCA+TGG | + | tig0016715:236003-236022 | Msa1359520:CDS | 40.0% | |
| GACACTCATACTATACCTGA+AGG | - | tig0016715:236115-236134 | None:intergenic | 40.0% | |
| ! | GTGCATCCTTTTTCCTATGA+TGG | - | tig0016715:236184-236203 | None:intergenic | 40.0% |
| CCGGAATATATGAGCTAGTT+TGG | - | tig0016715:236420-236439 | None:intergenic | 40.0% | |
| CAGCTACATACTTACAGTCA+TGG | + | tig0016715:236966-236985 | Msa1359520:intron | 40.0% | |
| !! | GCCAAAGTATGATTTGTTGC+AGG | + | tig0016715:237092-237111 | Msa1359520:intron | 40.0% |
| CCCTGCAACAAATCATACTT+TGG | - | tig0016715:237096-237115 | None:intergenic | 40.0% | |
| !! | TGATTTGTTGCAGGGTTTGA+AGG | + | tig0016715:237101-237120 | Msa1359520:intron | 40.0% |
| !! | GGTTTGAAGGATAGTGGAAT+TGG | + | tig0016715:237114-237133 | Msa1359520:CDS | 40.0% |
| !! | GATAGTGGAATTGGTTCTCA+AGG | + | tig0016715:237123-237142 | Msa1359520:CDS | 40.0% |
| !! | TGTTGGCAAGTTGATTACTG+TGG | - | tig0016715:237187-237206 | None:intergenic | 40.0% |
| GCCAACACCTTCTTATACAA+TGG | + | tig0016715:237200-237219 | Msa1359520:CDS | 40.0% | |
| ! | CCCATTGTATAAGAAGGTGT+TGG | - | tig0016715:237204-237223 | None:intergenic | 40.0% |
| ACTACTATGCAGATGGGAAG+TGG | + | tig0016715:233040-233059 | Msa1359520:CDS | 45.0% | |
| AAGTGGAACAAATCCTCCTC+TGG | + | tig0016715:233057-233076 | Msa1359520:CDS | 45.0% | |
| ! | CTGGTGGTTGGATTGATGAT+AGG | - | tig0016715:233093-233112 | Msa1359510:intron | 45.0% |
| AGTGGAAATAAGCTTGTGCG+CGG | - | tig0016715:233251-233270 | Msa1359510:intron | 45.0% | |
| AACAGCTTGTACACAGGAAG+AGG | + | tig0016715:233527-233546 | Msa1359520:intron | 45.0% | |
| AAGAGCAGAGTTGCTTCACA+AGG | + | tig0016715:233614-233633 | Msa1359520:CDS | 45.0% | |
| CAAGGCTGCAGCAATATTGA+AGG | + | tig0016715:233632-233651 | Msa1359520:CDS | 45.0% | |
| TACTTCAGTGACAGCATCCT+TGG | - | tig0016715:233709-233728 | Msa1359510:intron | 45.0% | |
| GGTTGTTAGATCAGGGGATT+TGG | + | tig0016715:234195-234214 | Msa1359520:intron | 45.0% | |
| GTGTCATATTGTGCAGAGGA+AGG | + | tig0016715:234217-234236 | Msa1359520:CDS | 45.0% | |
| GGAGTTAGAATTCTCGGAGA+AGG | + | tig0016715:234238-234257 | Msa1359520:CDS | 45.0% | |
| TCTCGGAGAAGGAAAGTTTC+TGG | + | tig0016715:234249-234268 | Msa1359520:CDS | 45.0% | |
| ! | CTGGTCTCTGATAGTTTTCC+AGG | + | tig0016715:234268-234287 | Msa1359520:CDS | 45.0% |
| TTGTGTGTGCAGATTCCACT+CGG | + | tig0016715:234397-234416 | Msa1359520:intron | 45.0% | |
| ATGGCTAAAACAACTCCGAG+TGG | - | tig0016715:234415-234434 | None:intergenic | 45.0% | |
| AGGATAGTTAAAAGGCGGGA+TGG | - | tig0016715:234434-234453 | None:intergenic | 45.0% | |
| ATTGCTCCAGCTCTTATTGC+TGG | + | tig0016715:234475-234494 | Msa1359520:CDS | 45.0% | |
| GAGTTTCCAGCAATAAGAGC+TGG | - | tig0016715:234484-234503 | None:intergenic | 45.0% | |
| !! | GGTTGGTGGTTTAAGGACAA+TGG | - | tig0016715:234506-234525 | None:intergenic | 45.0% |
| !! | ATACCTGGGTTGGTGGTTTA+AGG | - | tig0016715:234513-234532 | None:intergenic | 45.0% |
| ! | TAGTTGTATACCTGGGTTGG+TGG | - | tig0016715:234520-234539 | None:intergenic | 45.0% |
| TGCTGTAGCTGCACTACATA+TGG | + | tig0016715:234782-234801 | Msa1359520:CDS | 45.0% | |
| ! | GGTCTTATAAGCTGTGTGAC+AGG | + | tig0016715:234837-234856 | Msa1359520:CDS | 45.0% |
| !! | ACAGGAAAGGGTTCTGAGAT+TGG | + | tig0016715:234855-234874 | Msa1359520:CDS | 45.0% |
| ! | GACACTGCCTCACACATTTT+AGG | - | tig0016715:235016-235035 | None:intergenic | 45.0% |
| TAGTTCTTGAGTGTGTGAGG+CGG | - | tig0016715:235215-235234 | None:intergenic | 45.0% | |
| ATCTTGCTTGAGCCTCTTGT+TGG | - | tig0016715:235262-235281 | None:intergenic | 45.0% | |
| GTTCCTCTTCAAATGGAGCT+TGG | + | tig0016715:235459-235478 | Msa1359520:CDS | 45.0% | |
| GCTGCTAACATTGTGAAAGG+AGG | + | tig0016715:235531-235550 | Msa1359520:CDS | 45.0% | |
| TGCCAAGAATACAGAAGGGA+AGG | + | tig0016715:235945-235964 | Msa1359520:CDS | 45.0% | |
| ATGGGAAGAACCATTTGGAC+CGG | + | tig0016715:236022-236041 | Msa1359520:CDS | 45.0% | |
| ATGGCGAATTCCTTCTTCGA+CGG | - | tig0016715:236072-236091 | None:intergenic | 45.0% | |
| !! | TGCAAGCAATTTTGGCCTTC+AGG | + | tig0016715:236097-236116 | Msa1359520:CDS | 45.0% |
| ATGGGTCAGATATTCCGGTA+CGG | - | tig0016715:236230-236249 | None:intergenic | 45.0% | |
| CTAGCTCATATATTCCGGGA+CGG | + | tig0016715:236422-236441 | Msa1359520:intron | 45.0% | |
| TCACTGCATTCTCTGTCGAA+CGG | + | tig0016715:236582-236601 | Msa1359520:intron | 45.0% | |
| ATAAGCGATGCAATGGAGAC+AGG | + | tig0016715:236705-236724 | Msa1359520:CDS | 45.0% | |
| ! | ACCTGATCACTTCCCTTTTC+AGG | + | tig0016715:236761-236780 | Msa1359520:CDS | 45.0% |
| ACCTGAAAAGGGAAGTGATC+AGG | - | tig0016715:236765-236784 | None:intergenic | 45.0% | |
| TGGCAACTTAGCAAGATGGA+GGG | - | tig0016715:236798-236817 | None:intergenic | 45.0% | |
| ATGGCAACTTAGCAAGATGG+AGG | - | tig0016715:236799-236818 | None:intergenic | 45.0% | |
| TTGCAGGGTTTGAAGGATAG+TGG | + | tig0016715:237108-237127 | Msa1359520:intron | 45.0% | |
| GGAGATTGCAAAACCAGCCA+AGG | + | tig0016715:233689-233708 | Msa1359520:CDS | 50.0% | |
| CGATGGCTATGTTGTGCACA+AGG | + | tig0016715:233922-233941 | Msa1359520:intron | 50.0% | |
| TGTCCTTAAACCACCAACCC+AGG | + | tig0016715:234507-234526 | Msa1359520:CDS | 50.0% | |
| ATCCAGGGGTGAACTGCATA+AGG | + | tig0016715:234895-234914 | Msa1359520:CDS | 50.0% | |
| TACCTTATGCAGTTCACCCC+TGG | - | tig0016715:234900-234919 | None:intergenic | 50.0% | |
| TGTCCCCACCAGTGAAACTA+AGG | - | tig0016715:235407-235426 | None:intergenic | 50.0% | |
| CCACCAAGCTCCATTTGAAG+AGG | - | tig0016715:235465-235484 | None:intergenic | 50.0% | |
| CCTCTTCAAATGGAGCTTGG+TGG | + | tig0016715:235462-235481 | Msa1359520:CDS | 50.0% | |
| TGAAAGGAGGGTTCTCCTAC+AGG | + | tig0016715:235544-235563 | Msa1359520:CDS | 50.0% | |
| AGGAGGACCGACAGTTAGTT+TGG | - | tig0016715:235829-235848 | None:intergenic | 50.0% | |
| GCAGAGGATTCTGTGATGAC+CGG | - | tig0016715:235873-235892 | None:intergenic | 50.0% | |
| ACAGGCAAAACCGGTCCAAA+TGG | - | tig0016715:236035-236054 | None:intergenic | 50.0% | |
| CTCTAATACTCCCTCCGTAC+CGG | + | tig0016715:236213-236232 | Msa1359520:intron | 50.0% | |
| GTCAGATATTCCGGTACGGA+GGG | - | tig0016715:236226-236245 | None:intergenic | 50.0% | |
| CTCATATATTCCGGGACGGA+GGG | + | tig0016715:236426-236445 | Msa1359520:intron | 50.0% | |
| ATAGAATACTCCCTCCGTCC+CGG | - | tig0016715:236439-236458 | None:intergenic | 50.0% | |
| ATCAATTCAGCACCAGCTCG+CGG | + | tig0016715:236738-236757 | Msa1359520:CDS | 50.0% | |
| TCCAAGCAAATGGCAGGGAG+TGG | + | tig0016715:232982-233001 | Msa1359520:exon | 55.0% | |
| ! | TCCACTCCCTGCCATTTGCT+TGG | - | tig0016715:232986-233005 | Msa1359510:intron | 55.0% |
| TCAGTGACAGCATCCTTGGC+TGG | - | tig0016715:233705-233724 | Msa1359510:intron | 55.0% | |
| ATGTCTGTGCGAGCGCATTG+TGG | - | tig0016715:234017-234036 | None:intergenic | 55.0% | |
| !! | CATATGGCTGGCTTCCCCAA+AGG | + | tig0016715:234816-234835 | Msa1359520:CDS | 55.0% |
| AGTTTCACTGGTGGGGACAC+TGG | + | tig0016715:235408-235427 | Msa1359520:intron | 55.0% | |
| ACTAACTGTCGGTCCTCCTG+AGG | + | tig0016715:235830-235849 | Msa1359520:CDS | 55.0% | |
| ATGTCGCAGTCATCCTCAGG+AGG | - | tig0016715:235846-235865 | None:intergenic | 55.0% | |
| GTGATGTCGCAGTCATCCTC+AGG | - | tig0016715:235849-235868 | None:intergenic | 55.0% | |
| GGATGACTGCGACATCACAC+CGG | + | tig0016715:235851-235870 | Msa1359520:CDS | 55.0% | |
| GGTCAGATATTCCGGTACGG+AGG | - | tig0016715:236227-236246 | None:intergenic | 55.0% | |
| GCTCATATATTCCGGGACGG+AGG | + | tig0016715:236425-236444 | Msa1359520:intron | 55.0% | |
| GCGCATTGTGGCTGCATCGT+CGG | - | tig0016715:234005-234024 | None:intergenic | 60.0% | |
| AAGTGATCAGGTCCGCGAGC+TGG | - | tig0016715:236753-236772 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016715 | gene | 232924 | 237227 | 232924 | ID=Msa1359520;Name=Msa1359520 |
| tig0016715 | mRNA | 232924 | 237227 | 232924 | ID=Msa1359520-mRNA-1;Parent=Msa1359520;Name=Msa1359520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=67|0.75|0.66|1|1|1|9|0|496 |
| tig0016715 | exon | 232924 | 233135 | 232924 | ID=Msa1359520-mRNA-1:exon:11396;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 233532 | 233725 | 233532 | ID=Msa1359520-mRNA-1:exon:11397;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 234196 | 234324 | 234196 | ID=Msa1359520-mRNA-1:exon:11398;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 234409 | 234528 | 234409 | ID=Msa1359520-mRNA-1:exon:11399;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 234780 | 234916 | 234780 | ID=Msa1359520-mRNA-1:exon:11400;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 235410 | 235565 | 235410 | ID=Msa1359520-mRNA-1:exon:11401;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 235740 | 236118 | 235740 | ID=Msa1359520-mRNA-1:exon:11402;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 236666 | 236782 | 236666 | ID=Msa1359520-mRNA-1:exon:11403;Parent=Msa1359520-mRNA-1 |
| tig0016715 | exon | 237114 | 237227 | 237114 | ID=Msa1359520-mRNA-1:exon:11404;Parent=Msa1359520-mRNA-1 |
| tig0016715 | five_prime_UTR | 232924 | 232990 | 232924 | ID=Msa1359520-mRNA-1:five_prime_utr;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 232991 | 233135 | 232991 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 233532 | 233725 | 233532 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 234196 | 234324 | 234196 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 234409 | 234528 | 234409 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 234780 | 234916 | 234780 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 235410 | 235565 | 235410 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 235740 | 236118 | 235740 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 236666 | 236782 | 236666 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| tig0016715 | CDS | 237114 | 237227 | 237114 | ID=Msa1359520-mRNA-1:cds;Parent=Msa1359520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
