AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0626090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0626090 MtrunA17_Chr4g0001871 84.211 133 14 2 1 130 1 129 3.41e-67 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 116 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGTGTTGCCGGCTTCTT+TGG 0.183396 4_3:-5467674 Msa0626090:three_prime_UTR
CCGATACACGATGCTGATTT+TGG 0.200859 4_3:+5468072 Msa0626080:CDS
TGTTACATACACCAATTTAA+TGG 0.211368 4_3:+5467316 Msa0626080:intron
AATTCAAGTTATGAGAAATT+AGG 0.242375 4_3:+5468646 None:intergenic
ATCGGTTGCAATATACAATT+TGG 0.244630 4_3:-5467779 Msa0626090:three_prime_UTR
TTACTCTCATTGTTGTATAA+AGG 0.274824 4_3:+5469249 None:intergenic
CCACCAGGTCCCATGAAAAT+TGG 0.292226 4_3:-5468105 Msa0626090:three_prime_UTR
GAACTATATGCAAATGTTAA+TGG 0.296076 4_3:+5468340 None:intergenic
CATGTTTATGTTTGAAGCTT+GGG 0.300605 4_3:-5468717 Msa0626090:three_prime_UTR
CATTGAATAATTAATATAAC+TGG 0.305628 4_3:-5467204 Msa0626090:three_prime_UTR
GGAATACCACTATGTTTCTA+AGG 0.306682 4_3:+5468270 None:intergenic
AACATTTGGATACCTGTTAC+TGG 0.315756 4_3:+5468431 None:intergenic
ATTGTGAAAGTCCATTAAAT+TGG 0.328350 4_3:-5467327 Msa0626090:three_prime_UTR
CATGTAGCAGATGGAGCTTC+TGG 0.347330 4_3:+5467409 Msa0626080:CDS
TATTAAGATGTAGGAAACTA+TGG 0.353441 4_3:-5469005 Msa0626090:intron
AGCACAAGACTTCAAACATT+TGG 0.353952 4_3:+5468417 None:intergenic
GCTCTACATCCAAGTTATCT+TGG 0.366777 4_3:-5468827 Msa0626090:CDS
AGATGTTAGCCGGTCATGTT+TGG 0.367885 4_3:+5467713 Msa0626080:CDS
CTTCCATCATTTGTTGAGCT+TGG 0.372825 4_3:-5468159 Msa0626090:three_prime_UTR
TAACTATAATACCCAGTAAC+AGG 0.386130 4_3:-5468443 Msa0626090:three_prime_UTR
AACTATATGCAAATGTTAAT+GGG 0.386619 4_3:+5468341 None:intergenic
AATTTGGTTTCTTGATCGTC+AGG 0.399459 4_3:-5467763 Msa0626090:three_prime_UTR
AGACCTAACACGGTTCGAAT+AGG 0.402827 4_3:+5468509 None:intergenic
CCATGCCACCGTTCATTGAC+CGG 0.403671 4_3:+5467482 Msa0626080:CDS
GCTGTAGTGGATTGTGTTGC+CGG 0.405079 4_3:-5467683 Msa0626090:three_prime_UTR
ACTTTCAAGTGTCCGAATCT+TGG 0.415045 4_3:+5468027 Msa0626080:CDS
TCTCATGTATAAGCAAATAT+AGG 0.421438 4_3:-5467235 Msa0626090:three_prime_UTR
CGAATCTTGGTATCACTAGT+TGG 0.427122 4_3:+5468040 Msa0626080:CDS
ATTAAGAAAGCTAGAGGAAA+AGG 0.431070 4_3:-5468900 Msa0626090:CDS
AGATCACCTGCTATAGCTAT+AGG 0.431185 4_3:-5467868 Msa0626090:three_prime_UTR
TGAGCTACAACCTGATCTTA+AGG 0.431443 4_3:+5467984 Msa0626080:CDS
AACAGGTCGGGGAGGATCGC+GGG 0.434139 4_3:-5467518 Msa0626090:three_prime_UTR
GACCTAACACGGTTCGAATA+GGG 0.446620 4_3:+5468510 None:intergenic
AGCCCTATTCGAACCGTGTT+AGG 0.457843 4_3:-5468512 Msa0626090:three_prime_UTR
TGTTGATGAGTCTTCATTGA+TGG 0.460807 4_3:-5467568 Msa0626090:three_prime_UTR
ACATGTTTATGTTTGAAGCT+TGG 0.460999 4_3:-5468718 Msa0626090:three_prime_UTR
TGAGCATATGAAAGTGTTCA+AGG 0.464928 4_3:+5468209 Msa0626080:CDS
CCTGGTGGGATTGCTTATGA+AGG 0.469513 4_3:+5468120 Msa0626080:CDS
TATTCGATGTGATCGAAAAC+AGG 0.473086 4_3:-5467535 Msa0626090:three_prime_UTR
ATTCCAAGCTCAACAAATGA+TGG 0.479382 4_3:+5468156 Msa0626080:CDS
GATCTTAAGGCTCTTGTTCG+CGG 0.483505 4_3:+5467997 Msa0626080:CDS
GTCGGGGAGGATCGCGGGCA+CGG 0.484968 4_3:-5467513 Msa0626090:three_prime_UTR
TCACAACGCGTTGTCGCGAA+TGG 0.488428 4_3:+5467927 Msa0626080:CDS
TTGGTATCACTAGTTGGGCT+AGG 0.491919 4_3:+5468046 Msa0626080:CDS
GAATCTTGGTATCACTAGTT+GGG 0.496766 4_3:+5468041 Msa0626080:CDS
TGGACTTTCACAATTTATGC+AGG 0.500351 4_3:+5467336 Msa0626080:intron
GCAAGGGGAGAGAGTGAATA+CGG 0.507712 4_3:-5468486 Msa0626090:three_prime_UTR
GTCTTCATTTCATCAATACA+TGG 0.512251 4_3:+5467431 Msa0626080:CDS
CGCGGGCACGGAGTAGTGTC+CGG 0.512424 4_3:-5467501 Msa0626090:three_prime_UTR
AAACAGGTCGGGGAGGATCG+CGG 0.513402 4_3:-5467519 Msa0626090:three_prime_UTR
GCTAGAGGAAAAGGAGCTAA+AGG 0.517100 4_3:-5468891 Msa0626090:CDS
AAGTAACCTGGTGGAGGAGG+AGG 0.517126 4_3:-5467820 Msa0626090:three_prime_UTR
ATCACATTGCCGAAGTAACC+TGG 0.520406 4_3:-5467832 Msa0626090:three_prime_UTR
GAAGAATGCTTACTACTAGT+AGG 0.521612 4_3:+5469113 None:intergenic
ACTGCTGCACTGTCTGAGCC+TGG 0.523753 4_3:-5467601 Msa0626090:three_prime_UTR
CCGAAGTAACCTGGTGGAGG+AGG 0.524830 4_3:-5467823 Msa0626090:three_prime_UTR
TTGTAACCTTGCACGTCCAT+CGG 0.529719 4_3:-5467797 Msa0626090:three_prime_UTR
AGGTGAAATCCAAGATAACT+TGG 0.531170 4_3:+5468818 None:intergenic
CTGGTGGGATTGCTTATGAA+GGG 0.536541 4_3:+5468121 Msa0626080:CDS
TGAGTCTTCATTGATGGTGG+AGG 0.538145 4_3:-5467562 Msa0626090:three_prime_UTR
CATCAACAGCCTTCAAAACC+AGG 0.538781 4_3:+5467583 Msa0626080:CDS
GATGTGATCGAAAACAGGTC+GGG 0.540464 4_3:-5467530 Msa0626090:three_prime_UTR
CGAACAAGAGCCTTAAGATC+AGG 0.545405 4_3:-5467994 Msa0626090:three_prime_UTR
ACATTTGGATACCTGTTACT+GGG 0.546913 4_3:+5468432 None:intergenic
AACTATGGAAGCATAAAAGA+AGG 0.547768 4_3:-5468990 Msa0626090:CDS
CAACTAGTGATACCAAGATT+CGG 0.552597 4_3:-5468039 Msa0626090:three_prime_UTR
AAATGTGGAGGAGTCTCACT+TGG 0.556129 4_3:+5467370 Msa0626080:CDS
GACACTTCTCCAAACATGAC+CGG 0.556225 4_3:-5467722 Msa0626090:three_prime_UTR
CCAAAATCAGCATCGTGTAT+CGG 0.556234 4_3:-5468072 Msa0626090:three_prime_UTR
TGCTTATACATGAGACCGAA+GGG 0.561053 4_3:+5467243 Msa0626080:intron
AGAAGATAAGAAACATATCA+AGG 0.562331 4_3:-5468952 Msa0626090:CDS
CTACTTGCAGCATACCATGT+TGG 0.562961 4_3:-5467901 Msa0626090:three_prime_UTR
ACATCTCATAAGAGCTGTAG+TGG 0.563664 4_3:-5467696 Msa0626090:three_prime_UTR
AGCTCTTATGAGATGTTAGC+CGG 0.568259 4_3:+5467703 Msa0626080:CDS
CTCCCCTTGCAGACCTAACA+CGG 0.568523 4_3:+5468499 None:intergenic
CCGGTCAATGAACGGTGGCA+TGG 0.569673 4_3:-5467482 Msa0626090:three_prime_UTR
ATGCAACATCATGTAGCAGA+TGG 0.569843 4_3:+5467400 Msa0626080:CDS
TGAAGATACAAAATGTCACT+TGG 0.570136 4_3:+5468249 None:intergenic
CAGGTAACATATTTCAAATG+TGG 0.574648 4_3:+5467355 Msa0626080:intron
AAAGCTAAGTCCAAAGAAGC+CGG 0.576137 4_3:+5467664 Msa0626080:CDS
AAATTGTATATTGCAACCGA+TGG 0.576749 4_3:+5467781 Msa0626080:CDS
CCTTCATAAGCAATCCCACC+AGG 0.577804 4_3:-5468120 Msa0626090:three_prime_UTR
TGATGAGTCTTCATTGATGG+TGG 0.580450 4_3:-5467565 Msa0626090:three_prime_UTR
TCATAGCAACTTAACATGAA+AGG 0.582658 4_3:+5468761 None:intergenic
ATTTCCAAATCCAATCAGAA+AGG 0.583110 4_3:-5468578 Msa0626090:three_prime_UTR
TTGCTTATACATGAGACCGA+AGG 0.586836 4_3:+5467242 Msa0626080:intron
ACAACACCTATAGCTATAGC+AGG 0.591092 4_3:+5467862 Msa0626080:CDS
ACGGTGGCATGGAAACATCT+AGG 0.592350 4_3:-5467471 Msa0626090:three_prime_UTR
ATGTGATCGAAAACAGGTCG+GGG 0.593334 4_3:-5467529 Msa0626090:three_prime_UTR
TTACAACCTCCTCCTCCACC+AGG 0.596022 4_3:+5467814 Msa0626080:CDS
GAACCGTGTTAGGTCTGCAA+GGG 0.596457 4_3:-5468502 Msa0626090:three_prime_UTR
GACTCGATTAAGAAAGCTAG+AGG 0.596569 4_3:-5468906 Msa0626090:CDS
GGAGGAGTCTCACTTGGTGT+TGG 0.598358 4_3:+5467376 Msa0626080:CDS
CGATGTGATCGAAAACAGGT+CGG 0.599373 4_3:-5467531 Msa0626090:three_prime_UTR
AAACTCGTCAAATAGCATCA+TGG 0.602558 4_3:-5469147 Msa0626090:CDS
ACGCCACCTTAGAAACATAG+TGG 0.603755 4_3:-5468276 Msa0626090:three_prime_UTR
CCTCCTCCACCAGGTTACTT+CGG 0.604733 4_3:+5467823 Msa0626080:CDS
TTGCCGAAGTAACCTGGTGG+AGG 0.609089 4_3:-5467826 Msa0626090:three_prime_UTR
ACGGTTCGAATAGGGCTACT+CGG 0.617568 4_3:+5468518 None:intergenic
AGTAGTGTCCGGTCAATGAA+CGG 0.620348 4_3:-5467490 Msa0626090:three_prime_UTR
GTAACATATTTCAAATGTGG+AGG 0.625114 4_3:+5467358 Msa0626080:CDS
CGAACCGTGTTAGGTCTGCA+AGG 0.628387 4_3:-5468503 Msa0626090:three_prime_UTR
AAAACAAAGCTTACACACAC+AGG 0.629592 4_3:+5468798 None:intergenic
AAATGATGGAAGTTTATCTG+TGG 0.641669 4_3:+5468170 Msa0626080:CDS
ATCTCATGTCGAAACCAACA+TGG 0.643925 4_3:+5467887 Msa0626080:CDS
TTGCAACCGATGGACGTGCA+AGG 0.644947 4_3:+5467791 Msa0626080:CDS
AAAGAAGGAAGCAAGTTGCA+CGG 0.651204 4_3:-5468975 Msa0626090:CDS
ATACCACTATGTTTCTAAGG+TGG 0.656920 4_3:+5468273 None:intergenic
AACCGTGTTAGGTCTGCAAG+GGG 0.658848 4_3:-5468501 Msa0626090:three_prime_UTR
TGATCGAAAACAGGTCGGGG+AGG 0.675348 4_3:-5467526 Msa0626090:three_prime_UTR
ACATGGTCAGATGTAGCTCG+TGG 0.681307 4_3:+5467448 Msa0626080:CDS
AGAGGAAAAGGAGCTAAAGG+TGG 0.683202 4_3:-5468888 Msa0626090:CDS
ACATTGCCGAAGTAACCTGG+TGG 0.715184 4_3:-5467829 Msa0626090:three_prime_UTR
AGATAAGAAACATATCAAGG+AGG 0.727302 4_3:-5468949 Msa0626090:CDS
AGTGTCCGGTCAATGAACGG+TGG 0.732143 4_3:-5467487 Msa0626090:three_prime_UTR
GTAGAGCTTCGAGAACGACG+AGG 0.744495 4_3:+5468843 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTGAATAATTAATATAAC+TGG - chr4_3:5469154-5469173 Msa0626090:CDS 15.0%
!! CATTGAATAATTAATATAAC+TGG - chr4_3:5469154-5469173 Msa0626090:CDS 15.0%
!!! AATTCAAGTTATGAGAAATT+AGG + chr4_3:5467715-5467734 Msa0626080:CDS 20.0%
!! AACTATATGCAAATGTTAAT+GGG + chr4_3:5468020-5468039 Msa0626080:CDS 20.0%
!!! CTAGTTTTTTGTTTTTCTTT+AGG + chr4_3:5468054-5468073 Msa0626080:CDS 20.0%
!! CTAAAGAAAAACAAAAAACT+AGG - chr4_3:5468052-5468071 Msa0626090:three_prime_UTR 20.0%
!!! AATTCAAGTTATGAGAAATT+AGG + chr4_3:5467715-5467734 Msa0626080:CDS 20.0%
!! AACTATATGCAAATGTTAAT+GGG + chr4_3:5468020-5468039 Msa0626080:CDS 20.0%
!!! CTAGTTTTTTGTTTTTCTTT+AGG + chr4_3:5468054-5468073 Msa0626080:CDS 20.0%
!! CTAAAGAAAAACAAAAAACT+AGG - chr4_3:5468052-5468071 Msa0626090:three_prime_UTR 20.0%
! TTACTCTCATTGTTGTATAA+AGG + chr4_3:5467112-5467131 Msa0626080:intron 25.0%
! TATAGCATGAGTACAATTTA+AGG + chr4_3:5467291-5467310 Msa0626080:intron 25.0%
! TGCTTATTCTATTAAGATGT+AGG - chr4_3:5467344-5467363 Msa0626090:three_prime_UTR 25.0%
! TATTAAGATGTAGGAAACTA+TGG - chr4_3:5467353-5467372 Msa0626090:three_prime_UTR 25.0%
! AGAAGATAAGAAACATATCA+AGG - chr4_3:5467406-5467425 Msa0626090:three_prime_UTR 25.0%
! GAACTATATGCAAATGTTAA+TGG + chr4_3:5468021-5468040 Msa0626080:CDS 25.0%
!! TGTTTTTCTTTAGGTACTTT+TGG + chr4_3:5468045-5468064 Msa0626080:CDS 25.0%
! ATTGTGAAAGTCCATTAAAT+TGG - chr4_3:5469031-5469050 Msa0626090:intron 25.0%
! TGTTACATACACCAATTTAA+TGG + chr4_3:5469045-5469064 None:intergenic 25.0%
! TCTCATGTATAAGCAAATAT+AGG - chr4_3:5469123-5469142 Msa0626090:intron 25.0%
! TTACTCTCATTGTTGTATAA+AGG + chr4_3:5467112-5467131 Msa0626080:intron 25.0%
! TATAGCATGAGTACAATTTA+AGG + chr4_3:5467291-5467310 Msa0626080:intron 25.0%
! TGCTTATTCTATTAAGATGT+AGG - chr4_3:5467344-5467363 Msa0626090:three_prime_UTR 25.0%
! TATTAAGATGTAGGAAACTA+TGG - chr4_3:5467353-5467372 Msa0626090:three_prime_UTR 25.0%
! AGAAGATAAGAAACATATCA+AGG - chr4_3:5467406-5467425 Msa0626090:three_prime_UTR 25.0%
! GAACTATATGCAAATGTTAA+TGG + chr4_3:5468021-5468040 Msa0626080:CDS 25.0%
!! TGTTTTTCTTTAGGTACTTT+TGG + chr4_3:5468045-5468064 Msa0626080:CDS 25.0%
! ATTGTGAAAGTCCATTAAAT+TGG - chr4_3:5469031-5469050 Msa0626090:intron 25.0%
! TGTTACATACACCAATTTAA+TGG + chr4_3:5469045-5469064 None:intergenic 25.0%
! TCTCATGTATAAGCAAATAT+AGG - chr4_3:5469123-5469142 Msa0626090:intron 25.0%
!!! ACTCAAGCTATATCGATTTT+AGG - chr4_3:5467164-5467183 Msa0626090:three_prime_UTR 30.0%
! AACTATGGAAGCATAAAAGA+AGG - chr4_3:5467368-5467387 Msa0626090:three_prime_UTR 30.0%
AGATAAGAAACATATCAAGG+AGG - chr4_3:5467409-5467428 Msa0626090:three_prime_UTR 30.0%
ATTAAGAAAGCTAGAGGAAA+AGG - chr4_3:5467458-5467477 Msa0626090:three_prime_UTR 30.0%
TCATAGCAACTTAACATGAA+AGG + chr4_3:5467600-5467619 Msa0626080:CDS 30.0%
! ACATGTTTATGTTTGAAGCT+TGG - chr4_3:5467640-5467659 Msa0626090:three_prime_UTR 30.0%
! CATGTTTATGTTTGAAGCTT+GGG - chr4_3:5467641-5467660 Msa0626090:three_prime_UTR 30.0%
ATTTCCAAATCCAATCAGAA+AGG - chr4_3:5467780-5467799 Msa0626090:three_prime_UTR 30.0%
! TTTTCCTTTCTGATTGGATT+TGG + chr4_3:5467787-5467806 Msa0626080:CDS 30.0%
TAACTATAATACCCAGTAAC+AGG - chr4_3:5467915-5467934 Msa0626090:three_prime_UTR 30.0%
TGAAGATACAAAATGTCACT+TGG + chr4_3:5468112-5468131 Msa0626080:CDS 30.0%
! AAATGATGGAAGTTTATCTG+TGG + chr4_3:5468191-5468210 Msa0626080:CDS 30.0%
AAATTGTATATTGCAACCGA+TGG + chr4_3:5468580-5468599 None:intergenic 30.0%
ATCGGTTGCAATATACAATT+TGG - chr4_3:5468579-5468598 Msa0626090:three_prime_UTR 30.0%
GTCTTCATTTCATCAATACA+TGG + chr4_3:5468930-5468949 None:intergenic 30.0%
GTAACATATTTCAAATGTGG+AGG + chr4_3:5469003-5469022 None:intergenic 30.0%
CAGGTAACATATTTCAAATG+TGG + chr4_3:5469006-5469025 None:intergenic 30.0%
!!! ACTCAAGCTATATCGATTTT+AGG - chr4_3:5467164-5467183 Msa0626090:three_prime_UTR 30.0%
! AACTATGGAAGCATAAAAGA+AGG - chr4_3:5467368-5467387 Msa0626090:three_prime_UTR 30.0%
AGATAAGAAACATATCAAGG+AGG - chr4_3:5467409-5467428 Msa0626090:three_prime_UTR 30.0%
ATTAAGAAAGCTAGAGGAAA+AGG - chr4_3:5467458-5467477 Msa0626090:three_prime_UTR 30.0%
TCATAGCAACTTAACATGAA+AGG + chr4_3:5467600-5467619 Msa0626080:CDS 30.0%
! ACATGTTTATGTTTGAAGCT+TGG - chr4_3:5467640-5467659 Msa0626090:three_prime_UTR 30.0%
! CATGTTTATGTTTGAAGCTT+GGG - chr4_3:5467641-5467660 Msa0626090:three_prime_UTR 30.0%
ATTTCCAAATCCAATCAGAA+AGG - chr4_3:5467780-5467799 Msa0626090:three_prime_UTR 30.0%
! TTTTCCTTTCTGATTGGATT+TGG + chr4_3:5467787-5467806 Msa0626080:CDS 30.0%
TAACTATAATACCCAGTAAC+AGG - chr4_3:5467915-5467934 Msa0626090:three_prime_UTR 30.0%
TGAAGATACAAAATGTCACT+TGG + chr4_3:5468112-5468131 Msa0626080:CDS 30.0%
! AAATGATGGAAGTTTATCTG+TGG + chr4_3:5468191-5468210 Msa0626080:CDS 30.0%
AAATTGTATATTGCAACCGA+TGG + chr4_3:5468580-5468599 None:intergenic 30.0%
ATCGGTTGCAATATACAATT+TGG - chr4_3:5468579-5468598 Msa0626090:three_prime_UTR 30.0%
GTCTTCATTTCATCAATACA+TGG + chr4_3:5468930-5468949 None:intergenic 30.0%
GTAACATATTTCAAATGTGG+AGG + chr4_3:5469003-5469022 None:intergenic 30.0%
CAGGTAACATATTTCAAATG+TGG + chr4_3:5469006-5469025 None:intergenic 30.0%
AAACTCGTCAAATAGCATCA+TGG - chr4_3:5467211-5467230 Msa0626090:three_prime_UTR 35.0%
GAAGAATGCTTACTACTAGT+AGG + chr4_3:5467248-5467267 Msa0626080:intron 35.0%
AGGTGAAATCCAAGATAACT+TGG + chr4_3:5467543-5467562 Msa0626080:CDS 35.0%
AAAACAAAGCTTACACACAC+AGG + chr4_3:5467563-5467582 Msa0626080:CDS 35.0%
! CGATGATTTTCCTTTCTGAT+TGG + chr4_3:5467793-5467812 Msa0626080:CDS 35.0%
ACATTTGGATACCTGTTACT+GGG + chr4_3:5467929-5467948 Msa0626080:CDS 35.0%
AACATTTGGATACCTGTTAC+TGG + chr4_3:5467930-5467949 Msa0626080:CDS 35.0%
AGCACAAGACTTCAAACATT+TGG + chr4_3:5467944-5467963 Msa0626080:CDS 35.0%
! ATACCACTATGTTTCTAAGG+TGG + chr4_3:5468088-5468107 Msa0626080:CDS 35.0%
! GGAATACCACTATGTTTCTA+AGG + chr4_3:5468091-5468110 Msa0626080:CDS 35.0%
!! TGAGCATATGAAAGTGTTCA+AGG + chr4_3:5468152-5468171 Msa0626080:CDS 35.0%
ATTCCAAGCTCAACAAATGA+TGG + chr4_3:5468205-5468224 Msa0626080:CDS 35.0%
GAATCTTGGTATCACTAGTT+GGG + chr4_3:5468320-5468339 None:intergenic 35.0%
CAACTAGTGATACCAAGATT+CGG - chr4_3:5468319-5468338 Msa0626090:three_prime_UTR 35.0%
! AATTTGGTTTCTTGATCGTC+AGG - chr4_3:5468595-5468614 Msa0626090:three_prime_UTR 35.0%
! TGTTGATGAGTCTTCATTGA+TGG - chr4_3:5468790-5468809 Msa0626090:CDS 35.0%
TATTCGATGTGATCGAAAAC+AGG - chr4_3:5468823-5468842 Msa0626090:CDS 35.0%
TGGACTTTCACAATTTATGC+AGG + chr4_3:5469025-5469044 None:intergenic 35.0%
! AACTGTTTTCATACTCCCTT+CGG - chr4_3:5469100-5469119 Msa0626090:intron 35.0%
AAACTCGTCAAATAGCATCA+TGG - chr4_3:5467211-5467230 Msa0626090:three_prime_UTR 35.0%
GAAGAATGCTTACTACTAGT+AGG + chr4_3:5467248-5467267 Msa0626080:intron 35.0%
AGGTGAAATCCAAGATAACT+TGG + chr4_3:5467543-5467562 Msa0626080:CDS 35.0%
AAAACAAAGCTTACACACAC+AGG + chr4_3:5467563-5467582 Msa0626080:CDS 35.0%
! CGATGATTTTCCTTTCTGAT+TGG + chr4_3:5467793-5467812 Msa0626080:CDS 35.0%
ACATTTGGATACCTGTTACT+GGG + chr4_3:5467929-5467948 Msa0626080:CDS 35.0%
AACATTTGGATACCTGTTAC+TGG + chr4_3:5467930-5467949 Msa0626080:CDS 35.0%
AGCACAAGACTTCAAACATT+TGG + chr4_3:5467944-5467963 Msa0626080:CDS 35.0%
! ATACCACTATGTTTCTAAGG+TGG + chr4_3:5468088-5468107 Msa0626080:CDS 35.0%
! GGAATACCACTATGTTTCTA+AGG + chr4_3:5468091-5468110 Msa0626080:CDS 35.0%
!! TGAGCATATGAAAGTGTTCA+AGG + chr4_3:5468152-5468171 Msa0626080:CDS 35.0%
ATTCCAAGCTCAACAAATGA+TGG + chr4_3:5468205-5468224 Msa0626080:CDS 35.0%
GAATCTTGGTATCACTAGTT+GGG + chr4_3:5468320-5468339 None:intergenic 35.0%
CAACTAGTGATACCAAGATT+CGG - chr4_3:5468319-5468338 Msa0626090:three_prime_UTR 35.0%
! AATTTGGTTTCTTGATCGTC+AGG - chr4_3:5468595-5468614 Msa0626090:three_prime_UTR 35.0%
! TGTTGATGAGTCTTCATTGA+TGG - chr4_3:5468790-5468809 Msa0626090:CDS 35.0%
TATTCGATGTGATCGAAAAC+AGG - chr4_3:5468823-5468842 Msa0626090:CDS 35.0%
TGGACTTTCACAATTTATGC+AGG + chr4_3:5469025-5469044 None:intergenic 35.0%
! AACTGTTTTCATACTCCCTT+CGG - chr4_3:5469100-5469119 Msa0626090:intron 35.0%
! AGCATTCTTCGCCTTTTTGA+AGG - chr4_3:5467258-5467277 Msa0626090:three_prime_UTR 40.0%
AAGGAAACGCTCCTTCAAAA+AGG + chr4_3:5467272-5467291 Msa0626080:intron 40.0%
AAAGAAGGAAGCAAGTTGCA+CGG - chr4_3:5467383-5467402 Msa0626090:three_prime_UTR 40.0%
GACTCGATTAAGAAAGCTAG+AGG - chr4_3:5467452-5467471 Msa0626090:three_prime_UTR 40.0%
GCTCTACATCCAAGTTATCT+TGG - chr4_3:5467531-5467550 Msa0626090:three_prime_UTR 40.0%
! CTTCCATCATTTGTTGAGCT+TGG - chr4_3:5468199-5468218 Msa0626090:three_prime_UTR 40.0%
!!! ACACGATGCTGATTTTGGTT+GGG + chr4_3:5468284-5468303 None:intergenic 40.0%
!!! TACACGATGCTGATTTTGGT+TGG + chr4_3:5468285-5468304 None:intergenic 40.0%
CCAAAATCAGCATCGTGTAT+CGG - chr4_3:5468286-5468305 Msa0626090:three_prime_UTR 40.0%
CGAATCTTGGTATCACTAGT+TGG + chr4_3:5468321-5468340 None:intergenic 40.0%
! ACTTTCAAGTGTCCGAATCT+TGG + chr4_3:5468334-5468353 None:intergenic 40.0%
TGAGCTACAACCTGATCTTA+AGG + chr4_3:5468377-5468396 None:intergenic 40.0%
ATCTCATGTCGAAACCAACA+TGG + chr4_3:5468474-5468493 None:intergenic 40.0%
AGATCACCTGCTATAGCTAT+AGG - chr4_3:5468490-5468509 Msa0626090:three_prime_UTR 40.0%
ACAACACCTATAGCTATAGC+AGG + chr4_3:5468499-5468518 None:intergenic 40.0%
AGCTCTTATGAGATGTTAGC+CGG + chr4_3:5468658-5468677 None:intergenic 40.0%
ACATCTCATAAGAGCTGTAG+TGG - chr4_3:5468662-5468681 Msa0626090:three_prime_UTR 40.0%
AAAGCTAAGTCCAAAGAAGC+CGG + chr4_3:5468697-5468716 None:intergenic 40.0%
TGATGAGTCTTCATTGATGG+TGG - chr4_3:5468793-5468812 Msa0626090:CDS 40.0%
ATGCAACATCATGTAGCAGA+TGG + chr4_3:5468961-5468980 None:intergenic 40.0%
TGCTTATACATGAGACCGAA+GGG + chr4_3:5469118-5469137 None:intergenic 40.0%
TTGCTTATACATGAGACCGA+AGG + chr4_3:5469119-5469138 None:intergenic 40.0%
! AGCATTCTTCGCCTTTTTGA+AGG - chr4_3:5467258-5467277 Msa0626090:three_prime_UTR 40.0%
AAGGAAACGCTCCTTCAAAA+AGG + chr4_3:5467272-5467291 Msa0626080:intron 40.0%
AAAGAAGGAAGCAAGTTGCA+CGG - chr4_3:5467383-5467402 Msa0626090:three_prime_UTR 40.0%
GACTCGATTAAGAAAGCTAG+AGG - chr4_3:5467452-5467471 Msa0626090:three_prime_UTR 40.0%
GCTCTACATCCAAGTTATCT+TGG - chr4_3:5467531-5467550 Msa0626090:three_prime_UTR 40.0%
! CTTCCATCATTTGTTGAGCT+TGG - chr4_3:5468199-5468218 Msa0626090:three_prime_UTR 40.0%
!!! ACACGATGCTGATTTTGGTT+GGG + chr4_3:5468284-5468303 None:intergenic 40.0%
!!! TACACGATGCTGATTTTGGT+TGG + chr4_3:5468285-5468304 None:intergenic 40.0%
CCAAAATCAGCATCGTGTAT+CGG - chr4_3:5468286-5468305 Msa0626090:three_prime_UTR 40.0%
CGAATCTTGGTATCACTAGT+TGG + chr4_3:5468321-5468340 None:intergenic 40.0%
! ACTTTCAAGTGTCCGAATCT+TGG + chr4_3:5468334-5468353 None:intergenic 40.0%
TGAGCTACAACCTGATCTTA+AGG + chr4_3:5468377-5468396 None:intergenic 40.0%
ATCTCATGTCGAAACCAACA+TGG + chr4_3:5468474-5468493 None:intergenic 40.0%
AGATCACCTGCTATAGCTAT+AGG - chr4_3:5468490-5468509 Msa0626090:three_prime_UTR 40.0%
ACAACACCTATAGCTATAGC+AGG + chr4_3:5468499-5468518 None:intergenic 40.0%
AGCTCTTATGAGATGTTAGC+CGG + chr4_3:5468658-5468677 None:intergenic 40.0%
ACATCTCATAAGAGCTGTAG+TGG - chr4_3:5468662-5468681 Msa0626090:three_prime_UTR 40.0%
AAAGCTAAGTCCAAAGAAGC+CGG + chr4_3:5468697-5468716 None:intergenic 40.0%
TGATGAGTCTTCATTGATGG+TGG - chr4_3:5468793-5468812 Msa0626090:CDS 40.0%
ATGCAACATCATGTAGCAGA+TGG + chr4_3:5468961-5468980 None:intergenic 40.0%
TGCTTATACATGAGACCGAA+GGG + chr4_3:5469118-5469137 None:intergenic 40.0%
TTGCTTATACATGAGACCGA+AGG + chr4_3:5469119-5469138 None:intergenic 40.0%
GCTAGAGGAAAAGGAGCTAA+AGG - chr4_3:5467467-5467486 Msa0626090:three_prime_UTR 45.0%
AGAGGAAAAGGAGCTAAAGG+TGG - chr4_3:5467470-5467489 Msa0626090:three_prime_UTR 45.0%
GACCTAACACGGTTCGAATA+GGG + chr4_3:5467851-5467870 Msa0626080:CDS 45.0%
AGACCTAACACGGTTCGAAT+AGG + chr4_3:5467852-5467871 Msa0626080:CDS 45.0%
ACGCCACCTTAGAAACATAG+TGG - chr4_3:5468082-5468101 Msa0626090:three_prime_UTR 45.0%
CTGGTGGGATTGCTTATGAA+GGG + chr4_3:5468240-5468259 None:intergenic 45.0%
! CAATTTTCATGGGACCTGGT+GGG + chr4_3:5468255-5468274 None:intergenic 45.0%
! TGGGGAAGGCCAATTTTCAT+GGG + chr4_3:5468265-5468284 None:intergenic 45.0%
! TTGGGGAAGGCCAATTTTCA+TGG + chr4_3:5468266-5468285 None:intergenic 45.0%
!!! ATGCTGATTTTGGTTGGGGA+AGG + chr4_3:5468279-5468298 None:intergenic 45.0%
!!! CACGATGCTGATTTTGGTTG+GGG + chr4_3:5468283-5468302 None:intergenic 45.0%
!!! CCGATACACGATGCTGATTT+TGG + chr4_3:5468289-5468308 None:intergenic 45.0%
TTGGTATCACTAGTTGGGCT+AGG + chr4_3:5468315-5468334 None:intergenic 45.0%
GATCTTAAGGCTCTTGTTCG+CGG + chr4_3:5468364-5468383 None:intergenic 45.0%
CGAACAAGAGCCTTAAGATC+AGG - chr4_3:5468364-5468383 Msa0626090:three_prime_UTR 45.0%
CTACTTGCAGCATACCATGT+TGG - chr4_3:5468457-5468476 Msa0626090:three_prime_UTR 45.0%
ATCACATTGCCGAAGTAACC+TGG - chr4_3:5468526-5468545 Msa0626090:three_prime_UTR 45.0%
TTGTAACCTTGCACGTCCAT+CGG - chr4_3:5468561-5468580 Msa0626090:three_prime_UTR 45.0%
GACACTTCTCCAAACATGAC+CGG - chr4_3:5468636-5468655 Msa0626090:three_prime_UTR 45.0%
AGATGTTAGCCGGTCATGTT+TGG + chr4_3:5468648-5468667 None:intergenic 45.0%
CATCAACAGCCTTCAAAACC+AGG + chr4_3:5468778-5468797 None:intergenic 45.0%
!! TGAGTCTTCATTGATGGTGG+AGG - chr4_3:5468796-5468815 Msa0626090:CDS 45.0%
CGATGTGATCGAAAACAGGT+CGG - chr4_3:5468827-5468846 Msa0626090:CDS 45.0%
GATGTGATCGAAAACAGGTC+GGG - chr4_3:5468828-5468847 Msa0626090:CDS 45.0%
ATGTGATCGAAAACAGGTCG+GGG - chr4_3:5468829-5468848 Msa0626090:CDS 45.0%
AGTAGTGTCCGGTCAATGAA+CGG - chr4_3:5468868-5468887 Msa0626090:CDS 45.0%
AAATGTGGAGGAGTCTCACT+TGG + chr4_3:5468991-5469010 None:intergenic 45.0%
GCTAGAGGAAAAGGAGCTAA+AGG - chr4_3:5467467-5467486 Msa0626090:three_prime_UTR 45.0%
AGAGGAAAAGGAGCTAAAGG+TGG - chr4_3:5467470-5467489 Msa0626090:three_prime_UTR 45.0%
GACCTAACACGGTTCGAATA+GGG + chr4_3:5467851-5467870 Msa0626080:CDS 45.0%
AGACCTAACACGGTTCGAAT+AGG + chr4_3:5467852-5467871 Msa0626080:CDS 45.0%
ACGCCACCTTAGAAACATAG+TGG - chr4_3:5468082-5468101 Msa0626090:three_prime_UTR 45.0%
CTGGTGGGATTGCTTATGAA+GGG + chr4_3:5468240-5468259 None:intergenic 45.0%
! CAATTTTCATGGGACCTGGT+GGG + chr4_3:5468255-5468274 None:intergenic 45.0%
! TGGGGAAGGCCAATTTTCAT+GGG + chr4_3:5468265-5468284 None:intergenic 45.0%
! TTGGGGAAGGCCAATTTTCA+TGG + chr4_3:5468266-5468285 None:intergenic 45.0%
!!! ATGCTGATTTTGGTTGGGGA+AGG + chr4_3:5468279-5468298 None:intergenic 45.0%
!!! CACGATGCTGATTTTGGTTG+GGG + chr4_3:5468283-5468302 None:intergenic 45.0%
!!! CCGATACACGATGCTGATTT+TGG + chr4_3:5468289-5468308 None:intergenic 45.0%
TTGGTATCACTAGTTGGGCT+AGG + chr4_3:5468315-5468334 None:intergenic 45.0%
GATCTTAAGGCTCTTGTTCG+CGG + chr4_3:5468364-5468383 None:intergenic 45.0%
CGAACAAGAGCCTTAAGATC+AGG - chr4_3:5468364-5468383 Msa0626090:three_prime_UTR 45.0%
CTACTTGCAGCATACCATGT+TGG - chr4_3:5468457-5468476 Msa0626090:three_prime_UTR 45.0%
ATCACATTGCCGAAGTAACC+TGG - chr4_3:5468526-5468545 Msa0626090:three_prime_UTR 45.0%
TTGTAACCTTGCACGTCCAT+CGG - chr4_3:5468561-5468580 Msa0626090:three_prime_UTR 45.0%
GACACTTCTCCAAACATGAC+CGG - chr4_3:5468636-5468655 Msa0626090:three_prime_UTR 45.0%
AGATGTTAGCCGGTCATGTT+TGG + chr4_3:5468648-5468667 None:intergenic 45.0%
CATCAACAGCCTTCAAAACC+AGG + chr4_3:5468778-5468797 None:intergenic 45.0%
!! TGAGTCTTCATTGATGGTGG+AGG - chr4_3:5468796-5468815 Msa0626090:CDS 45.0%
CGATGTGATCGAAAACAGGT+CGG - chr4_3:5468827-5468846 Msa0626090:CDS 45.0%
GATGTGATCGAAAACAGGTC+GGG - chr4_3:5468828-5468847 Msa0626090:CDS 45.0%
ATGTGATCGAAAACAGGTCG+GGG - chr4_3:5468829-5468848 Msa0626090:CDS 45.0%
AGTAGTGTCCGGTCAATGAA+CGG - chr4_3:5468868-5468887 Msa0626090:CDS 45.0%
AAATGTGGAGGAGTCTCACT+TGG + chr4_3:5468991-5469010 None:intergenic 45.0%
ACGGTTCGAATAGGGCTACT+CGG + chr4_3:5467843-5467862 Msa0626080:CDS 50.0%
AGCCCTATTCGAACCGTGTT+AGG - chr4_3:5467846-5467865 Msa0626090:three_prime_UTR 50.0%
GAACCGTGTTAGGTCTGCAA+GGG - chr4_3:5467856-5467875 Msa0626090:three_prime_UTR 50.0%
AACCGTGTTAGGTCTGCAAG+GGG - chr4_3:5467857-5467876 Msa0626090:three_prime_UTR 50.0%
GCAAGGGGAGAGAGTGAATA+CGG - chr4_3:5467872-5467891 Msa0626090:three_prime_UTR 50.0%
CCTGGTGGGATTGCTTATGA+AGG + chr4_3:5468241-5468260 None:intergenic 50.0%
CCTTCATAAGCAATCCCACC+AGG - chr4_3:5468238-5468257 Msa0626090:three_prime_UTR 50.0%
! CCAATTTTCATGGGACCTGG+TGG + chr4_3:5468256-5468275 None:intergenic 50.0%
CCACCAGGTCCCATGAAAAT+TGG - chr4_3:5468253-5468272 Msa0626090:three_prime_UTR 50.0%
! AGGCCAATTTTCATGGGACC+TGG + chr4_3:5468259-5468278 None:intergenic 50.0%
ACATTGCCGAAGTAACCTGG+TGG - chr4_3:5468529-5468548 Msa0626090:three_prime_UTR 50.0%
!! GCTGTAGTGGATTGTGTTGC+CGG - chr4_3:5468675-5468694 Msa0626090:three_prime_UTR 50.0%
!! GATTGTGTTGCCGGCTTCTT+TGG - chr4_3:5468684-5468703 Msa0626090:three_prime_UTR 50.0%
!!! CTGTCTGAGCCTGGTTTTGA+AGG - chr4_3:5468766-5468785 Msa0626090:CDS 50.0%
ACGGTGGCATGGAAACATCT+AGG - chr4_3:5468887-5468906 Msa0626090:CDS 50.0%
ACATGGTCAGATGTAGCTCG+TGG + chr4_3:5468913-5468932 None:intergenic 50.0%
CATGTAGCAGATGGAGCTTC+TGG + chr4_3:5468952-5468971 None:intergenic 50.0%
ACGGTTCGAATAGGGCTACT+CGG + chr4_3:5467843-5467862 Msa0626080:CDS 50.0%
AGCCCTATTCGAACCGTGTT+AGG - chr4_3:5467846-5467865 Msa0626090:three_prime_UTR 50.0%
GAACCGTGTTAGGTCTGCAA+GGG - chr4_3:5467856-5467875 Msa0626090:three_prime_UTR 50.0%
AACCGTGTTAGGTCTGCAAG+GGG - chr4_3:5467857-5467876 Msa0626090:three_prime_UTR 50.0%
GCAAGGGGAGAGAGTGAATA+CGG - chr4_3:5467872-5467891 Msa0626090:three_prime_UTR 50.0%
CCTGGTGGGATTGCTTATGA+AGG + chr4_3:5468241-5468260 None:intergenic 50.0%
CCTTCATAAGCAATCCCACC+AGG - chr4_3:5468238-5468257 Msa0626090:three_prime_UTR 50.0%
! CCAATTTTCATGGGACCTGG+TGG + chr4_3:5468256-5468275 None:intergenic 50.0%
CCACCAGGTCCCATGAAAAT+TGG - chr4_3:5468253-5468272 Msa0626090:three_prime_UTR 50.0%
! AGGCCAATTTTCATGGGACC+TGG + chr4_3:5468259-5468278 None:intergenic 50.0%
ACATTGCCGAAGTAACCTGG+TGG - chr4_3:5468529-5468548 Msa0626090:three_prime_UTR 50.0%
!! GCTGTAGTGGATTGTGTTGC+CGG - chr4_3:5468675-5468694 Msa0626090:three_prime_UTR 50.0%
!! GATTGTGTTGCCGGCTTCTT+TGG - chr4_3:5468684-5468703 Msa0626090:three_prime_UTR 50.0%
!!! CTGTCTGAGCCTGGTTTTGA+AGG - chr4_3:5468766-5468785 Msa0626090:CDS 50.0%
ACGGTGGCATGGAAACATCT+AGG - chr4_3:5468887-5468906 Msa0626090:CDS 50.0%
ACATGGTCAGATGTAGCTCG+TGG + chr4_3:5468913-5468932 None:intergenic 50.0%
CATGTAGCAGATGGAGCTTC+TGG + chr4_3:5468952-5468971 None:intergenic 50.0%
GTAGAGCTTCGAGAACGACG+AGG + chr4_3:5467518-5467537 Msa0626080:CDS 55.0%
CGAACCGTGTTAGGTCTGCA+AGG - chr4_3:5467855-5467874 Msa0626090:three_prime_UTR 55.0%
CTCCCCTTGCAGACCTAACA+CGG + chr4_3:5467862-5467881 Msa0626080:CDS 55.0%
TCACAACGCGTTGTCGCGAA+TGG + chr4_3:5468434-5468453 None:intergenic 55.0%
TTGCCGAAGTAACCTGGTGG+AGG - chr4_3:5468532-5468551 Msa0626090:three_prime_UTR 55.0%
CCTCCTCCACCAGGTTACTT+CGG + chr4_3:5468538-5468557 None:intergenic 55.0%
AAGTAACCTGGTGGAGGAGG+AGG - chr4_3:5468538-5468557 Msa0626090:three_prime_UTR 55.0%
TTACAACCTCCTCCTCCACC+AGG + chr4_3:5468547-5468566 None:intergenic 55.0%
TTGCAACCGATGGACGTGCA+AGG + chr4_3:5468570-5468589 None:intergenic 55.0%
TGATCGAAAACAGGTCGGGG+AGG - chr4_3:5468832-5468851 Msa0626090:CDS 55.0%
AGTGTCCGGTCAATGAACGG+TGG - chr4_3:5468871-5468890 Msa0626090:CDS 55.0%
CCATGCCACCGTTCATTGAC+CGG + chr4_3:5468879-5468898 None:intergenic 55.0%
!! GGAGGAGTCTCACTTGGTGT+TGG + chr4_3:5468985-5469004 None:intergenic 55.0%
GTAGAGCTTCGAGAACGACG+AGG + chr4_3:5467518-5467537 Msa0626080:CDS 55.0%
CGAACCGTGTTAGGTCTGCA+AGG - chr4_3:5467855-5467874 Msa0626090:three_prime_UTR 55.0%
CTCCCCTTGCAGACCTAACA+CGG + chr4_3:5467862-5467881 Msa0626080:CDS 55.0%
TCACAACGCGTTGTCGCGAA+TGG + chr4_3:5468434-5468453 None:intergenic 55.0%
TTGCCGAAGTAACCTGGTGG+AGG - chr4_3:5468532-5468551 Msa0626090:three_prime_UTR 55.0%
CCTCCTCCACCAGGTTACTT+CGG + chr4_3:5468538-5468557 None:intergenic 55.0%
AAGTAACCTGGTGGAGGAGG+AGG - chr4_3:5468538-5468557 Msa0626090:three_prime_UTR 55.0%
TTACAACCTCCTCCTCCACC+AGG + chr4_3:5468547-5468566 None:intergenic 55.0%
TTGCAACCGATGGACGTGCA+AGG + chr4_3:5468570-5468589 None:intergenic 55.0%
TGATCGAAAACAGGTCGGGG+AGG - chr4_3:5468832-5468851 Msa0626090:CDS 55.0%
AGTGTCCGGTCAATGAACGG+TGG - chr4_3:5468871-5468890 Msa0626090:CDS 55.0%
CCATGCCACCGTTCATTGAC+CGG + chr4_3:5468879-5468898 None:intergenic 55.0%
!! GGAGGAGTCTCACTTGGTGT+TGG + chr4_3:5468985-5469004 None:intergenic 55.0%
CCGAAGTAACCTGGTGGAGG+AGG - chr4_3:5468535-5468554 Msa0626090:three_prime_UTR 60.0%
ACTGCTGCACTGTCTGAGCC+TGG - chr4_3:5468757-5468776 Msa0626090:exon 60.0%
AAACAGGTCGGGGAGGATCG+CGG - chr4_3:5468839-5468858 Msa0626090:CDS 60.0%
CCGGTCAATGAACGGTGGCA+TGG - chr4_3:5468876-5468895 Msa0626090:CDS 60.0%
CCGAAGTAACCTGGTGGAGG+AGG - chr4_3:5468535-5468554 Msa0626090:three_prime_UTR 60.0%
ACTGCTGCACTGTCTGAGCC+TGG - chr4_3:5468757-5468776 Msa0626090:exon 60.0%
AAACAGGTCGGGGAGGATCG+CGG - chr4_3:5468839-5468858 Msa0626090:CDS 60.0%
CCGGTCAATGAACGGTGGCA+TGG - chr4_3:5468876-5468895 Msa0626090:CDS 60.0%
AACAGGTCGGGGAGGATCGC+GGG - chr4_3:5468840-5468859 Msa0626090:CDS 65.0%
AACAGGTCGGGGAGGATCGC+GGG - chr4_3:5468840-5468859 Msa0626090:CDS 65.0%
CGCGGGCACGGAGTAGTGTC+CGG - chr4_3:5468857-5468876 Msa0626090:CDS 70.0%
CGCGGGCACGGAGTAGTGTC+CGG - chr4_3:5468857-5468876 Msa0626090:CDS 70.0%
GTCGGGGAGGATCGCGGGCA+CGG - chr4_3:5468845-5468864 Msa0626090:CDS 75.0%
GTCGGGGAGGATCGCGGGCA+CGG - chr4_3:5468845-5468864 Msa0626090:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5467098 5469282 5467098 ID=Msa0626090;Name=Msa0626090
chr4_3 mRNA 5467098 5469282 5467098 ID=Msa0626090-mRNA-1;Parent=Msa0626090;Name=Msa0626090-mRNA-1;_AED=0.02;_eAED=0.02;_QI=24|1|1|1|1|1|2|1663|130
chr4_3 exon 5467098 5469020 5467098 ID=Msa0626090-mRNA-1:exon:1535;Parent=Msa0626090-mRNA-1
chr4_3 exon 5469126 5469282 5469126 ID=Msa0626090-mRNA-1:exon:1534;Parent=Msa0626090-mRNA-1
chr4_3 five_prime_UTR 5469259 5469282 5469259 ID=Msa0626090-mRNA-1:five_prime_utr;Parent=Msa0626090-mRNA-1
chr4_3 CDS 5469126 5469258 5469126 ID=Msa0626090-mRNA-1:cds;Parent=Msa0626090-mRNA-1
chr4_3 CDS 5468761 5469020 5468761 ID=Msa0626090-mRNA-1:cds;Parent=Msa0626090-mRNA-1
chr4_3 three_prime_UTR 5467098 5468760 5467098 ID=Msa0626090-mRNA-1:three_prime_utr;Parent=Msa0626090-mRNA-1
Gene Sequence

>Msa0626090

ATGAGAGTAAGATTTCTTACATGTTTCATCGCTGTTTTATGCACTCAAGCTATATCGATTTTAGGTTTCAGTTCAGAACATAGAGCTTTAAACTCGTCAAATAGCATCATGGAAACAATGCAACCTACTAGTAATGTAGGAAACTATGGAAGCATAAAAGAAGGAAGCAAGTTGCACGGAGAAGATAAGAAACATATCAAGGAGGAAAAGTTTGAACGAGCTTATGACTCGATTAAGAAAGCTAGAGGAAAAGGAGCTAAAGGTGGTGCAAATGATAATCGCTCTGAACCTCGTCGTTCTCGAAGCTCTACATCCAAGTTATCTTGGATTTCACCTGTGTGTGTAAGCTTTGTTTTAATATCAGTCTTCTCCTTTCATGTTAAGTTGCTATGA

Protein sequence

>Msa0626090

MRVRFLTCFIAVLCTQAISILGFSSEHRALNSSNSIMETMQPTSNVGNYGSIKEGSKLHGEDKKHIKEEKFERAYDSIKKARGKGAKGGANDNRSEPRRSRSSTSKLSWISPVCVSFVLISVFSFHVKLL*