Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611800 | XP_039685898.1 | 86.076 | 79 | 11 | 0 | 1 | 79 | 345 | 423 | 6.16e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611800 | sp|Q39202|RLK1_ARATH | 47.436 | 78 | 32 | 1 | 1 | 78 | 678 | 746 | 1.79e-19 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0611800 | 0.808642 | 2.801233e-50 | -8.615850e-47 |
| Msa0011170 | Msa0611800 | 0.812691 | 3.732552e-51 | -8.615850e-47 |
| Msa0014710 | Msa0611800 | 0.836704 | 8.004295e-57 | -8.615850e-47 |
| Msa0017510 | Msa0611800 | 0.809442 | 1.888859e-50 | -8.615850e-47 |
| Msa0036140 | Msa0611800 | 0.815412 | 9.368704e-52 | -8.615850e-47 |
| Msa0084380 | Msa0611800 | 0.806519 | 7.906859e-50 | -8.615850e-47 |
| Msa0095560 | Msa0611800 | 0.808660 | 2.776330e-50 | -8.615850e-47 |
| Msa0112750 | Msa0611800 | 0.809247 | 2.079167e-50 | -8.615850e-47 |
| Msa0116770 | Msa0611800 | 0.828847 | 7.160930e-55 | -8.615850e-47 |
| Msa0117770 | Msa0611800 | 0.800514 | 1.390405e-48 | -8.615850e-47 |
| Msa0610430 | Msa0611800 | 0.809293 | 2.032365e-50 | -8.615850e-47 |
| Msa0611800 | Msa0625720 | 0.803276 | 3.765388e-49 | -8.615850e-47 |
| Msa0611800 | Msa0657970 | 0.850814 | 1.331544e-60 | -8.615850e-47 |
| Msa0611800 | Msa0663380 | 0.820480 | 6.709508e-53 | -8.615850e-47 |
| Msa0611800 | Msa0663390 | 0.804857 | 1.766390e-49 | -8.615850e-47 |
| Msa0611800 | Msa0663810 | 0.801600 | 8.340059e-49 | -8.615850e-47 |
| Msa0611800 | Msa0672570 | 0.802701 | 4.950463e-49 | -8.615850e-47 |
| Msa0611800 | Msa0673460 | 0.824740 | 6.850799e-54 | -8.615850e-47 |
| Msa0611800 | Msa0680070 | 0.821792 | 3.344517e-53 | -8.615850e-47 |
| Msa0611800 | Msa0681250 | 0.809559 | 1.782551e-50 | -8.615850e-47 |
| Msa0611800 | Msa0681270 | 0.814972 | 1.173126e-51 | -8.615850e-47 |
| Msa0611800 | Msa0682550 | 0.820917 | 5.324878e-53 | -8.615850e-47 |
| Msa0611800 | Msa0685750 | 0.813022 | 3.158342e-51 | -8.615850e-47 |
| Msa0611800 | Msa0688270 | 0.800674 | 1.289980e-48 | -8.615850e-47 |
| Msa0611800 | Msa0693380 | 0.815348 | 9.682487e-52 | -8.615850e-47 |
| Msa0611800 | Msa0716840 | 0.811861 | 5.665574e-51 | -8.615850e-47 |
| Msa0611800 | Msa0724210 | 0.815222 | 1.032513e-51 | -8.615850e-47 |
| Msa0611800 | Msa0735170 | 0.809247 | 2.079307e-50 | -8.615850e-47 |
| Msa0611800 | Msa0740510 | 0.804176 | 2.449506e-49 | -8.615850e-47 |
| Msa0611800 | Msa0745790 | 0.819740 | 9.911891e-53 | -8.615850e-47 |
| Msa0611800 | Msa0759410 | 0.833838 | 4.237368e-56 | -8.615850e-47 |
| Msa0611800 | Msa0760130 | 0.800997 | 1.108396e-48 | -8.615850e-47 |
| Msa0611800 | Msa0762970 | 0.802166 | 6.382614e-49 | -8.615850e-47 |
| Msa0611800 | Msa0766630 | 0.833879 | 4.138052e-56 | -8.615850e-47 |
| Msa0611800 | Msa0790510 | 0.824426 | 8.123756e-54 | -8.615850e-47 |
| Msa0611800 | Msa0802830 | 0.803893 | 2.805062e-49 | -8.615850e-47 |
| Msa0611800 | Msa0820770 | 0.811513 | 6.743118e-51 | -8.615850e-47 |
| Msa0611800 | Msa0820850 | 0.821685 | 3.539472e-53 | -8.615850e-47 |
| Msa0611800 | Msa0832340 | 0.806735 | 7.120547e-50 | -8.615850e-47 |
| Msa0611800 | Msa0861090 | 0.803609 | 3.212040e-49 | -8.615850e-47 |
| Msa0611800 | Msa0861130 | 0.829370 | 5.346854e-55 | -8.615850e-47 |
| Msa0611800 | Msa0880140 | 0.804847 | 1.775143e-49 | -8.615850e-47 |
| Msa0611800 | Msa0897330 | 0.809097 | 2.239322e-50 | -8.615850e-47 |
| Msa0611800 | Msa0907070 | 0.800498 | 1.401451e-48 | -8.615850e-47 |
| Msa0611800 | Msa0909120 | 0.806204 | 9.213678e-50 | -8.615850e-47 |
| Msa0611800 | Msa0922410 | 0.809415 | 1.913680e-50 | -8.615850e-47 |
| Msa0611800 | Msa0947660 | 0.802957 | 4.384642e-49 | -8.615850e-47 |
| Msa0611800 | Msa0969450 | 0.818763 | 1.653932e-52 | -8.615850e-47 |
| Msa0611800 | Msa0969520 | 0.836444 | 9.323197e-57 | -8.615850e-47 |
| Msa0611800 | Msa0974070 | 0.817748 | 2.807305e-52 | -8.615850e-47 |
| Msa0611800 | Msa1014540 | 0.841945 | 3.492038e-58 | -8.615850e-47 |
| Msa0611800 | Msa1030970 | 0.804780 | 1.833035e-49 | -8.615850e-47 |
| Msa0611800 | Msa1075220 | -0.819421 | 1.172068e-52 | -8.615850e-47 |
| Msa0611800 | Msa1075540 | 0.846176 | 2.560215e-59 | -8.615850e-47 |
| Msa0611800 | Msa1075650 | 0.827189 | 1.794439e-54 | -8.615850e-47 |
| Msa0611800 | Msa1082500 | 0.856180 | 3.829123e-62 | -8.615850e-47 |
| Msa0611800 | Msa1083840 | 0.802842 | 4.630564e-49 | -8.615850e-47 |
| Msa0611800 | Msa1090260 | 0.804717 | 1.889159e-49 | -8.615850e-47 |
| Msa0611800 | Msa1098400 | 0.800221 | 1.595699e-48 | -8.615850e-47 |
| Msa0611800 | Msa1104090 | 0.809031 | 2.312609e-50 | -8.615850e-47 |
| Msa0611800 | Msa1113170 | 0.817884 | 2.615672e-52 | -8.615850e-47 |
| Msa0611800 | Msa1116130 | -0.810288 | 1.241756e-50 | -8.615850e-47 |
| Msa0611800 | Msa1121490 | 0.809814 | 1.570716e-50 | -8.615850e-47 |
| Msa0611800 | Msa1137570 | 0.804170 | 2.455943e-49 | -8.615850e-47 |
| Msa0611800 | Msa1144720 | -0.805298 | 1.428350e-49 | -8.615850e-47 |
| Msa0611800 | Msa1162550 | -0.824820 | 6.559699e-54 | -8.615850e-47 |
| Msa0611800 | Msa1172670 | 0.801644 | 8.171218e-49 | -8.615850e-47 |
| Msa0611800 | Msa1174040 | 0.810159 | 1.323760e-50 | -8.615850e-47 |
| Msa0611800 | Msa1186950 | -0.805107 | 1.565792e-49 | -8.615850e-47 |
| Msa0611800 | Msa1204530 | 0.802325 | 5.917702e-49 | -8.615850e-47 |
| Msa0611800 | Msa1225130 | 0.804178 | 2.447079e-49 | -8.615850e-47 |
| Msa0611800 | Msa1277660 | 0.804452 | 2.146154e-49 | -8.615850e-47 |
| Msa0611800 | Msa1283860 | 0.803265 | 3.785307e-49 | -8.615850e-47 |
| Msa0611800 | Msa1284680 | 0.839664 | 1.383982e-57 | -8.615850e-47 |
| Msa0611800 | Msa1302640 | 0.803920 | 2.768205e-49 | -8.615850e-47 |
| Msa0611800 | Msa1305190 | 0.808255 | 3.387834e-50 | -8.615850e-47 |
| Msa0611800 | Msa1305340 | 0.812245 | 4.670774e-51 | -8.615850e-47 |
| Msa0611800 | Msa1306840 | 0.812613 | 3.881543e-51 | -8.615850e-47 |
| Msa0611800 | Msa1306850 | 0.813299 | 2.745920e-51 | -8.615850e-47 |
| Msa0611800 | Msa1313150 | 0.800075 | 1.708461e-48 | -8.615850e-47 |
| Msa0611800 | Msa1314340 | 0.803539 | 3.322068e-49 | -8.615850e-47 |
| Msa0611800 | Msa1331000 | 0.832254 | 1.049804e-55 | -8.615850e-47 |
| Msa0611800 | Msa1340270 | 0.809133 | 2.199761e-50 | -8.615850e-47 |
| Msa0611800 | Msa1342840 | 0.800030 | 1.745087e-48 | -8.615850e-47 |
| Msa0611800 | Msa1353470 | 0.814271 | 1.677482e-51 | -8.615850e-47 |
| Msa0611800 | Msa1359040 | 0.829042 | 6.422347e-55 | -8.615850e-47 |
| Msa0611800 | Msa1372760 | 0.807896 | 4.040018e-50 | -8.615850e-47 |
| Msa0611800 | Msa1372980 | 0.808756 | 2.649141e-50 | -8.615850e-47 |
| Msa0611800 | Msa1373010 | 0.800915 | 1.152037e-48 | -8.615850e-47 |
| Msa0611800 | Msa1373030 | 0.846950 | 1.573412e-59 | -8.615850e-47 |
| Msa0611800 | Msa1384350 | 0.802036 | 6.787104e-49 | -8.615850e-47 |
| Msa0611800 | Msa1390050 | 0.806327 | 8.682570e-50 | -8.615850e-47 |
| Msa0611800 | Msa1392260 | 0.834149 | 3.541094e-56 | -8.615850e-47 |
| Msa0611800 | Msa1420820 | 0.822431 | 2.377308e-53 | -8.615850e-47 |
| Msa0611800 | Msa1423880 | 0.806692 | 7.269945e-50 | -8.615850e-47 |
| Msa0611800 | Msa1424680 | 0.821707 | 3.498532e-53 | -8.615850e-47 |
| Msa0611800 | Msa1427230 | 0.803297 | 3.727700e-49 | -8.615850e-47 |
| Msa0611800 | Msa1429900 | 0.828363 | 9.372174e-55 | -8.615850e-47 |
| Msa0611800 | Msa1435270 | 0.810617 | 1.054607e-50 | -8.615850e-47 |
| Msa0611800 | Msa1450760 | 0.803898 | 2.797807e-49 | -8.615850e-47 |
| Msa0611800 | Msa1452240 | 0.803109 | 4.077897e-49 | -8.615850e-47 |
| Msa0611800 | Msa1460830 | 0.805142 | 1.539414e-49 | -8.615850e-47 |
| Msa0611800 | Msa1466540 | 0.829584 | 4.743457e-55 | -8.615850e-47 |
| Msa0131770 | Msa0611800 | 0.818763 | 1.653963e-52 | -8.615850e-47 |
| Msa0141620 | Msa0611800 | 0.818104 | 2.332849e-52 | -8.615850e-47 |
| Msa0150270 | Msa0611800 | 0.801515 | 8.682786e-49 | -8.615850e-47 |
| Msa0157290 | Msa0611800 | 0.808646 | 2.796029e-50 | -8.615850e-47 |
| Msa0165210 | Msa0611800 | 0.831421 | 1.685596e-55 | -8.615850e-47 |
| Msa0165220 | Msa0611800 | 0.818830 | 1.596785e-52 | -8.615850e-47 |
| Msa0166870 | Msa0611800 | 0.815801 | 7.674276e-52 | -8.615850e-47 |
| Msa0170230 | Msa0611800 | 0.801244 | 9.864321e-49 | -8.615850e-47 |
| Msa0178930 | Msa0611800 | 0.814288 | 1.662749e-51 | -8.615850e-47 |
| Msa0188830 | Msa0611800 | 0.829459 | 5.088712e-55 | -8.615850e-47 |
| Msa0195000 | Msa0611800 | 0.801618 | 8.269190e-49 | -8.615850e-47 |
| Msa0197660 | Msa0611800 | 0.806122 | 9.587516e-50 | -8.615850e-47 |
| Msa0212990 | Msa0611800 | 0.810641 | 1.041922e-50 | -8.615850e-47 |
| Msa0218270 | Msa0611800 | 0.801252 | 9.828846e-49 | -8.615850e-47 |
| Msa0220440 | Msa0611800 | 0.801959 | 7.039024e-49 | -8.615850e-47 |
| Msa0220740 | Msa0611800 | 0.806467 | 8.110013e-50 | -8.615850e-47 |
| Msa0223410 | Msa0611800 | -0.802047 | 6.752786e-49 | -8.615850e-47 |
| Msa0226890 | Msa0611800 | 0.804731 | 1.876896e-49 | -8.615850e-47 |
| Msa0373450 | Msa0611800 | 0.810251 | 1.265072e-50 | -8.615850e-47 |
| Msa0379640 | Msa0611800 | 0.804747 | 1.862129e-49 | -8.615850e-47 |
| Msa0388960 | Msa0611800 | 0.810751 | 9.865186e-51 | -8.615850e-47 |
| Msa0420960 | Msa0611800 | 0.815134 | 1.079830e-51 | -8.615850e-47 |
| Msa0430420 | Msa0611800 | 0.803410 | 3.533518e-49 | -8.615850e-47 |
| Msa0432300 | Msa0611800 | 0.806191 | 9.274451e-50 | -8.615850e-47 |
| Msa0433410 | Msa0611800 | -0.803187 | 3.929247e-49 | -8.615850e-47 |
| Msa0440750 | Msa0611800 | 0.815545 | 8.750233e-52 | -8.615850e-47 |
| Msa0466120 | Msa0611800 | 0.806659 | 7.389840e-50 | -8.615850e-47 |
| Msa0467060 | Msa0611800 | 0.805854 | 1.091530e-49 | -8.615850e-47 |
| Msa0469940 | Msa0611800 | -0.815577 | 8.609332e-52 | -8.615850e-47 |
| Msa0481530 | Msa0611800 | 0.800911 | 1.154306e-48 | -8.615850e-47 |
| Msa0239240 | Msa0611800 | 0.803496 | 3.391322e-49 | -8.615850e-47 |
| Msa0270100 | Msa0611800 | 0.809847 | 1.545354e-50 | -8.615850e-47 |
| Msa0287410 | Msa0611800 | 0.800216 | 1.599083e-48 | -8.615850e-47 |
| Msa0288100 | Msa0611800 | 0.803736 | 3.023088e-49 | -8.615850e-47 |
| Msa0292930 | Msa0611800 | 0.811961 | 5.387021e-51 | -8.615850e-47 |
| Msa0317510 | Msa0611800 | 0.805199 | 1.498355e-49 | -8.615850e-47 |
| Msa0319170 | Msa0611800 | 0.810452 | 1.144798e-50 | -8.615850e-47 |
| Msa0330340 | Msa0611800 | 0.809099 | 2.237210e-50 | -8.615850e-47 |
| Msa0339620 | Msa0611800 | 0.802068 | 6.686546e-49 | -8.615850e-47 |
| Msa0340450 | Msa0611800 | 0.811381 | 7.201910e-51 | -8.615850e-47 |
| Msa0344690 | Msa0611800 | -0.822870 | 1.879492e-53 | -8.615850e-47 |
| Msa0345970 | Msa0611800 | 0.809412 | 1.916474e-50 | -8.615850e-47 |
| Msa0357020 | Msa0611800 | 0.805817 | 1.111524e-49 | -8.615850e-47 |
| Msa0363790 | Msa0611800 | 0.802693 | 4.970836e-49 | -8.615850e-47 |
| Msa0484780 | Msa0611800 | 0.828976 | 6.661841e-55 | -8.615850e-47 |
| Msa0516170 | Msa0611800 | 0.805293 | 1.431522e-49 | -8.615850e-47 |
| Msa0518380 | Msa0611800 | 0.806437 | 8.231470e-50 | -8.615850e-47 |
| Msa0520700 | Msa0611800 | 0.801263 | 9.776340e-49 | -8.615850e-47 |
| Msa0529890 | Msa0611800 | 0.804112 | 2.525355e-49 | -8.615850e-47 |
| Msa0532350 | Msa0611800 | 0.811715 | 6.096005e-51 | -8.615850e-47 |
| Msa0563840 | Msa0611800 | 0.800975 | 1.119718e-48 | -8.615850e-47 |
| Msa0577500 | Msa0611800 | 0.812997 | 3.199445e-51 | -8.615850e-47 |
| Msa0585560 | Msa0611800 | 0.810113 | 1.354325e-50 | -8.615850e-47 |
| Msa0593650 | Msa0611800 | 0.806351 | 8.578981e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611800 | MtrunA17_Chr1g0205561 | 86.076 | 79 | 11 | 0 | 1 | 79 | 345 | 423 | 6.84e-42 | 142 |
| Msa0611800 | MtrunA17_Chr5g0399591 | 57.143 | 77 | 29 | 2 | 1 | 77 | 655 | 727 | 2.93e-22 | 89.0 |
| Msa0611800 | MtrunA17_Chr5g0399561 | 55.844 | 77 | 30 | 2 | 1 | 77 | 658 | 730 | 7.53e-22 | 87.8 |
| Msa0611800 | MtrunA17_Chr2g0311511 | 48.718 | 78 | 35 | 2 | 1 | 78 | 590 | 662 | 1.06e-19 | 81.6 |
| Msa0611800 | MtrunA17_Chr2g0311521 | 59.649 | 57 | 23 | 0 | 1 | 57 | 887 | 943 | 2.11e-19 | 80.9 |
| Msa0611800 | MtrunA17_Chr4g0063701 | 56.452 | 62 | 27 | 0 | 1 | 62 | 673 | 734 | 5.48e-19 | 79.7 |
| Msa0611800 | MtrunA17_Chr2g0311541 | 57.895 | 57 | 24 | 0 | 1 | 57 | 644 | 700 | 5.58e-19 | 79.7 |
| Msa0611800 | MtrunA17_Chr2g0311551 | 56.140 | 57 | 25 | 0 | 1 | 57 | 881 | 937 | 1.63e-18 | 78.2 |
| Msa0611800 | MtrunA17_Chr8g0338471 | 58.929 | 56 | 23 | 0 | 1 | 56 | 668 | 723 | 2.15e-17 | 75.1 |
| Msa0611800 | MtrunA17_Chr8g0338501 | 58.929 | 56 | 23 | 0 | 1 | 56 | 699 | 754 | 2.31e-17 | 75.1 |
| Msa0611800 | MtrunA17_Chr8g0338531 | 58.929 | 56 | 23 | 0 | 1 | 56 | 603 | 658 | 2.74e-17 | 74.7 |
| Msa0611800 | MtrunA17_Chr1g0202331 | 53.448 | 58 | 27 | 0 | 1 | 58 | 680 | 737 | 7.86e-16 | 70.5 |
| Msa0611800 | MtrunA17_Chr6g0467281 | 52.308 | 65 | 29 | 2 | 1 | 63 | 634 | 698 | 1.45e-14 | 67.0 |
| Msa0611800 | MtrunA17_Chr4g0023071 | 52.727 | 55 | 26 | 0 | 1 | 55 | 639 | 693 | 3.87e-14 | 65.9 |
| Msa0611800 | MtrunA17_Chr2g0323301 | 52.727 | 55 | 26 | 0 | 1 | 55 | 641 | 695 | 8.53e-14 | 64.7 |
| Msa0611800 | MtrunA17_Chr6g0467301 | 51.667 | 60 | 27 | 1 | 1 | 58 | 639 | 698 | 9.78e-14 | 64.7 |
| Msa0611800 | MtrunA17_Chr3g0123891 | 38.667 | 75 | 42 | 1 | 1 | 75 | 434 | 504 | 3.52e-13 | 63.2 |
| Msa0611800 | MtrunA17_Chr5g0394381 | 71.053 | 38 | 11 | 0 | 1 | 38 | 638 | 675 | 3.67e-13 | 63.2 |
| Msa0611800 | MtrunA17_Chr0c04g0492031 | 42.029 | 69 | 38 | 1 | 1 | 67 | 662 | 730 | 4.14e-13 | 62.8 |
| Msa0611800 | MtrunA17_Chr3g0134291 | 42.029 | 69 | 38 | 1 | 1 | 67 | 662 | 730 | 4.18e-13 | 62.8 |
| Msa0611800 | MtrunA17_Chr0c04g0492001 | 42.029 | 69 | 38 | 1 | 1 | 67 | 662 | 730 | 4.26e-13 | 62.8 |
| Msa0611800 | MtrunA17_Chr4g0063251 | 53.571 | 56 | 26 | 0 | 1 | 56 | 254 | 309 | 5.47e-13 | 62.4 |
| Msa0611800 | MtrunA17_Chr2g0314611 | 43.548 | 62 | 35 | 0 | 1 | 62 | 631 | 692 | 6.86e-13 | 62.4 |
| Msa0611800 | MtrunA17_Chr7g0237331 | 40.000 | 70 | 38 | 1 | 16 | 85 | 671 | 736 | 6.93e-13 | 62.4 |
| Msa0611800 | MtrunA17_Chr5g0413171 | 35.443 | 79 | 47 | 1 | 1 | 79 | 234 | 308 | 9.57e-13 | 61.6 |
| Msa0611800 | MtrunA17_Chr3g0102451 | 43.529 | 85 | 39 | 2 | 1 | 83 | 473 | 550 | 1.00e-12 | 61.6 |
| Msa0611800 | MtrunA17_Chr8g0348661 | 47.368 | 57 | 30 | 0 | 1 | 57 | 629 | 685 | 1.23e-12 | 61.6 |
| Msa0611800 | MtrunA17_Chr3g0114851 | 49.091 | 55 | 28 | 0 | 1 | 55 | 666 | 720 | 2.67e-12 | 60.5 |
| Msa0611800 | MtrunA17_Chr2g0318171 | 41.935 | 62 | 36 | 0 | 1 | 62 | 627 | 688 | 3.30e-12 | 60.5 |
| Msa0611800 | MtrunA17_Chr4g0064511 | 50.943 | 53 | 26 | 0 | 8 | 60 | 371 | 423 | 3.54e-12 | 60.1 |
| Msa0611800 | MtrunA17_Chr7g0237341 | 38.028 | 71 | 40 | 1 | 16 | 86 | 670 | 736 | 3.78e-12 | 60.1 |
| Msa0611800 | MtrunA17_Chr1g0149381 | 45.614 | 57 | 31 | 0 | 1 | 57 | 647 | 703 | 4.02e-12 | 60.1 |
| Msa0611800 | MtrunA17_Chr3g0078761 | 42.353 | 85 | 40 | 2 | 1 | 83 | 493 | 570 | 4.42e-12 | 60.1 |
| Msa0611800 | MtrunA17_Chr5g0446651 | 42.353 | 85 | 40 | 2 | 1 | 83 | 506 | 583 | 5.60e-12 | 59.7 |
| Msa0611800 | MtrunA17_Chr2g0323341 | 47.273 | 55 | 29 | 0 | 1 | 55 | 554 | 608 | 6.75e-12 | 59.3 |
| Msa0611800 | MtrunA17_Chr8g0382101 | 33.333 | 84 | 52 | 1 | 1 | 84 | 431 | 510 | 7.67e-12 | 59.3 |
| Msa0611800 | MtrunA17_Chr2g0306811 | 45.161 | 62 | 34 | 0 | 1 | 62 | 256 | 317 | 8.19e-12 | 59.3 |
| Msa0611800 | MtrunA17_Chr2g0333091 | 43.860 | 57 | 32 | 0 | 1 | 57 | 638 | 694 | 9.38e-12 | 58.9 |
| Msa0611800 | MtrunA17_Chr3g0137741 | 41.667 | 60 | 35 | 0 | 1 | 60 | 638 | 697 | 1.33e-11 | 58.5 |
| Msa0611800 | MtrunA17_Chr7g0238671 | 56.000 | 50 | 22 | 0 | 8 | 57 | 237 | 286 | 1.57e-11 | 58.5 |
| Msa0611800 | MtrunA17_Chr4g0071371 | 36.145 | 83 | 47 | 1 | 1 | 83 | 282 | 358 | 1.95e-11 | 58.2 |
| Msa0611800 | MtrunA17_Chr2g0278831 | 36.842 | 76 | 44 | 1 | 1 | 76 | 441 | 512 | 2.25e-11 | 57.8 |
| Msa0611800 | MtrunA17_Chr5g0409041 | 43.750 | 64 | 36 | 0 | 1 | 64 | 450 | 513 | 2.31e-11 | 57.8 |
| Msa0611800 | MtrunA17_Chr7g0237351 | 49.057 | 53 | 20 | 1 | 5 | 50 | 656 | 708 | 2.99e-11 | 57.8 |
| Msa0611800 | MtrunA17_Chr1g0161631 | 38.462 | 78 | 45 | 1 | 1 | 78 | 644 | 718 | 3.14e-11 | 57.4 |
| Msa0611800 | MtrunA17_Chr3g0106131 | 50.000 | 52 | 24 | 1 | 1 | 50 | 653 | 704 | 3.53e-11 | 57.4 |
| Msa0611800 | MtrunA17_Chr8g0385051 | 37.333 | 75 | 43 | 1 | 1 | 75 | 421 | 491 | 4.27e-11 | 57.0 |
| Msa0611800 | MtrunA17_Chr1g0200911 | 35.294 | 85 | 49 | 2 | 1 | 83 | 452 | 532 | 4.54e-11 | 57.0 |
| Msa0611800 | MtrunA17_Chr3g0106181 | 50.000 | 52 | 24 | 1 | 1 | 50 | 200 | 251 | 4.61e-11 | 57.0 |
| Msa0611800 | MtrunA17_Chr4g0060011 | 43.750 | 64 | 36 | 0 | 1 | 64 | 461 | 524 | 5.50e-11 | 57.0 |
| Msa0611800 | MtrunA17_Chr3g0112391 | 35.366 | 82 | 44 | 2 | 1 | 82 | 492 | 564 | 5.85e-11 | 56.6 |
| Msa0611800 | MtrunA17_Chr7g0226891 | 43.636 | 55 | 31 | 0 | 1 | 55 | 196 | 250 | 6.68e-11 | 56.6 |
| Msa0611800 | MtrunA17_Chr8g0373501 | 44.828 | 58 | 32 | 0 | 1 | 58 | 482 | 539 | 8.42e-11 | 56.2 |
| Msa0611800 | MtrunA17_Chr2g0312561 | 49.091 | 55 | 28 | 0 | 1 | 55 | 190 | 244 | 9.10e-11 | 56.2 |
| Msa0611800 | MtrunA17_Chr5g0403891 | 43.860 | 57 | 32 | 0 | 1 | 57 | 401 | 457 | 9.23e-11 | 56.2 |
| Msa0611800 | MtrunA17_Chr2g0299041 | 42.105 | 57 | 33 | 0 | 1 | 57 | 260 | 316 | 9.99e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611800 | AT2G19130.1 | 52.381 | 63 | 28 | 1 | 1 | 63 | 640 | 700 | 1.78e-14 | 67.0 |
| Msa0611800 | AT5G24080.3 | 48.276 | 58 | 30 | 0 | 1 | 58 | 550 | 607 | 2.39e-14 | 66.6 |
| Msa0611800 | AT5G24080.1 | 48.276 | 58 | 30 | 0 | 1 | 58 | 550 | 607 | 2.39e-14 | 66.6 |
| Msa0611800 | AT5G24080.2 | 48.276 | 58 | 30 | 0 | 1 | 58 | 677 | 734 | 2.43e-14 | 66.6 |
| Msa0611800 | AT4G00340.1 | 51.786 | 56 | 27 | 0 | 1 | 56 | 627 | 682 | 8.36e-14 | 65.1 |
| Msa0611800 | AT4G00340.2 | 51.786 | 56 | 27 | 0 | 1 | 56 | 606 | 661 | 8.69e-14 | 65.1 |
| Msa0611800 | AT1G34300.1 | 48.438 | 64 | 32 | 1 | 1 | 63 | 629 | 692 | 1.42e-13 | 64.7 |
| Msa0611800 | AT5G20050.1 | 50.000 | 56 | 28 | 0 | 1 | 56 | 257 | 312 | 5.71e-13 | 62.8 |
| Msa0611800 | AT2G23200.1 | 45.614 | 57 | 31 | 0 | 1 | 57 | 634 | 690 | 2.75e-12 | 60.8 |
| Msa0611800 | AT5G35370.1 | 42.857 | 63 | 36 | 0 | 1 | 63 | 660 | 722 | 3.04e-12 | 60.8 |
| Msa0611800 | AT5G10290.1 | 34.524 | 84 | 51 | 1 | 1 | 84 | 438 | 517 | 3.80e-12 | 60.5 |
| Msa0611800 | AT5G10290.2 | 34.524 | 84 | 51 | 1 | 1 | 84 | 438 | 517 | 3.80e-12 | 60.5 |
| Msa0611800 | AT4G32300.1 | 40.323 | 62 | 37 | 0 | 1 | 62 | 639 | 700 | 8.43e-12 | 59.7 |
| Msa0611800 | AT5G65240.1 | 34.524 | 84 | 51 | 1 | 1 | 84 | 432 | 511 | 1.23e-11 | 58.9 |
| Msa0611800 | AT2G13790.1 | 36.842 | 76 | 44 | 1 | 1 | 76 | 442 | 513 | 1.25e-11 | 58.9 |
| Msa0611800 | AT2G13800.4 | 36.842 | 76 | 44 | 1 | 1 | 76 | 306 | 377 | 1.33e-11 | 58.9 |
| Msa0611800 | AT2G13800.2 | 36.842 | 76 | 44 | 1 | 1 | 76 | 306 | 377 | 1.33e-11 | 58.9 |
| Msa0611800 | AT5G65240.2 | 34.524 | 84 | 51 | 1 | 1 | 84 | 432 | 511 | 1.34e-11 | 58.9 |
| Msa0611800 | AT2G13800.3 | 36.842 | 76 | 44 | 1 | 1 | 76 | 423 | 494 | 1.36e-11 | 58.9 |
| Msa0611800 | AT2G13800.1 | 36.842 | 76 | 44 | 1 | 1 | 76 | 423 | 494 | 1.36e-11 | 58.9 |
| Msa0611800 | AT1G31420.2 | 43.750 | 64 | 36 | 0 | 1 | 64 | 450 | 513 | 1.72e-11 | 58.5 |
| Msa0611800 | AT1G31420.1 | 43.750 | 64 | 36 | 0 | 1 | 64 | 451 | 514 | 1.74e-11 | 58.5 |
| Msa0611800 | AT1G31420.3 | 43.750 | 64 | 36 | 0 | 1 | 64 | 451 | 514 | 1.74e-11 | 58.5 |
| Msa0611800 | AT5G62710.2 | 45.312 | 64 | 35 | 0 | 1 | 64 | 425 | 488 | 3.14e-11 | 57.8 |
| Msa0611800 | AT5G62710.1 | 45.312 | 64 | 35 | 0 | 1 | 64 | 459 | 522 | 3.25e-11 | 57.8 |
| Msa0611800 | AT4G33430.1 | 36.471 | 85 | 48 | 2 | 1 | 83 | 437 | 517 | 3.25e-11 | 57.8 |
| Msa0611800 | AT1G78530.2 | 43.939 | 66 | 37 | 0 | 1 | 66 | 218 | 283 | 3.35e-11 | 57.8 |
| Msa0611800 | AT4G33430.2 | 36.471 | 85 | 48 | 2 | 1 | 83 | 484 | 564 | 4.30e-11 | 57.4 |
| Msa0611800 | AT1G78530.1 | 43.939 | 66 | 37 | 0 | 1 | 66 | 218 | 283 | 4.49e-11 | 57.4 |
| Msa0611800 | AT5G02290.2 | 50.909 | 55 | 27 | 0 | 6 | 60 | 230 | 284 | 5.08e-11 | 57.4 |
| Msa0611800 | AT5G02290.1 | 50.909 | 55 | 27 | 0 | 6 | 60 | 230 | 284 | 5.08e-11 | 57.4 |
| Msa0611800 | AT3G24540.1 | 42.623 | 61 | 35 | 0 | 1 | 61 | 328 | 388 | 5.58e-11 | 57.4 |
| Msa0611800 | AT1G71830.1 | 35.294 | 85 | 49 | 2 | 1 | 83 | 450 | 530 | 5.91e-11 | 57.0 |
| Msa0611800 | AT2G02800.1 | 43.590 | 78 | 37 | 3 | 8 | 84 | 245 | 316 | 7.11e-11 | 57.0 |
| Msa0611800 | AT2G02800.2 | 43.590 | 78 | 37 | 3 | 8 | 84 | 245 | 316 | 7.11e-11 | 57.0 |
Find 71 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGATACTTATAGATTT+TGG | 0.095261 | 4_2:-60198433 | Msa0611800:CDS |
| GACAACCTCTCACATATTTA+AGG | 0.143428 | 4_2:+60198007 | None:intergenic |
| ACTTTCCACTCACCCGTTAA+TGG | 0.208512 | 4_2:+60199992 | None:intergenic |
| TATTGAAAGATCTTCGTTAA+TGG | 0.214867 | 4_2:+60199350 | None:intergenic |
| CTCAAAATTAAAGCATGTTT+TGG | 0.214988 | 4_2:-60198664 | Msa0611800:five_prime_UTR |
| GAGTTGCATCAAGTTGAAAA+TGG | 0.290353 | 4_2:-60198472 | Msa0611800:CDS |
| CTGATAGGAGAAAGAGAAAA+AGG | 0.299654 | 4_2:+60198088 | None:intergenic |
| ATGAAGCCAGGAAAATTAAA+AGG | 0.324337 | 4_2:+60199879 | None:intergenic |
| TGTGCCTTAATCCAACTATT+AGG | 0.331472 | 4_2:-60198298 | Msa0611800:three_prime_UTR |
| CTTGGCTTTCTCTCCATTAA+CGG | 0.331892 | 4_2:-60200005 | Msa0611800:five_prime_UTR |
| GGAACATAGTCAACTTCTAA+TGG | 0.332894 | 4_2:-60200186 | Msa0611800:five_prime_UTR |
| ACTAATGTTTCTTTCATGAT+TGG | 0.333872 | 4_2:-60200207 | None:intergenic |
| CAACAGGCAGTGGCGGCATT+TGG | 0.339764 | 4_2:+60199373 | None:intergenic |
| TGCAACACCTTTGCAATAGA+TGG | 0.340385 | 4_2:+60198275 | None:intergenic |
| GAAGAAGGAACACGATAATA+TGG | 0.342760 | 4_2:-60199476 | Msa0611800:five_prime_UTR |
| TATGTCCATCTAACTCAAAA+TGG | 0.345856 | 4_2:+60199645 | None:intergenic |
| AAGTTGTTAATGATTTCTTT+AGG | 0.353115 | 4_2:-60198355 | Msa0611800:three_prime_UTR |
| GAACTTACCTAAATTCTATT+AGG | 0.360006 | 4_2:+60199318 | None:intergenic |
| TTAGCTTACAATTAACTGAT+AGG | 0.365879 | 4_2:+60198073 | None:intergenic |
| ATGGCCTAATAGTTGGATTA+AGG | 0.377798 | 4_2:+60198294 | None:intergenic |
| AGGGCTCATGGTTGCATCTC+AGG | 0.383344 | 4_2:-60200058 | Msa0611800:five_prime_UTR |
| AGTGTTCCACCATTGTTTGA+TGG | 0.394571 | 4_2:-60198227 | Msa0611800:three_prime_UTR |
| TAGAGGGACAATGGGATGTT+TGG | 0.404956 | 4_2:-60198593 | Msa0611800:CDS |
| TTGGCTTTCTCTCCATTAAC+GGG | 0.411542 | 4_2:-60200004 | Msa0611800:intron |
| GCAATAGATGGCCTAATAGT+TGG | 0.413635 | 4_2:+60198287 | None:intergenic |
| TAATGTGTATTAGAATTGCT+TGG | 0.415609 | 4_2:-60199854 | Msa0611800:five_prime_UTR |
| TTCTTTCAGGGAAGGGCTCA+TGG | 0.426994 | 4_2:-60200070 | Msa0611800:intron |
| ACAAAATAGAGAGCAAGAAT+TGG | 0.432074 | 4_2:+60198191 | None:intergenic |
| TGCACATATTGTATCTCCCT+TGG | 0.435532 | 4_2:-60200023 | Msa0611800:five_prime_UTR |
| AATGCCAGGTATCTCATAGA+AGG | 0.436096 | 4_2:+60199401 | None:intergenic |
| AATGTGTATTAGAATTGCTT+GGG | 0.441866 | 4_2:-60199853 | Msa0611800:intron |
| AGATCTTCGTTAATGGCAAC+AGG | 0.445206 | 4_2:+60199357 | None:intergenic |
| AGCTCTATTTCTATCTGAAA+AGG | 0.445760 | 4_2:-60199904 | Msa0611800:five_prime_UTR |
| GAACATAGTCAACTTCTAAT+GGG | 0.446869 | 4_2:-60200185 | Msa0611800:five_prime_UTR |
| TAGGTTTGAGAGAATGACTA+TGG | 0.448851 | 4_2:-60198336 | Msa0611800:three_prime_UTR |
| TCTGTCTTTCATTAGCAGCT+TGG | 0.455797 | 4_2:+60198636 | None:intergenic |
| TGTACGATGGTGTTTAAACT+TGG | 0.459476 | 4_2:+60198723 | None:intergenic |
| AGAACAAGCACAAATGTTAG+AGG | 0.472788 | 4_2:-60198610 | Msa0611800:CDS |
| GGTTCTATATTGAGCAAAAG+AGG | 0.487092 | 4_2:-60198411 | Msa0611800:CDS |
| TCGTTAATGGCAACAGGCAG+TGG | 0.497673 | 4_2:+60199363 | None:intergenic |
| TGCACCTATCACTGCAAAAG+TGG | 0.498118 | 4_2:-60198551 | Msa0611800:CDS |
| AAAGTGGATATCTACAGCTT+TGG | 0.498218 | 4_2:-60198535 | Msa0611800:CDS |
| AAAGTTTCTATAGATAAAGA+AGG | 0.504229 | 4_2:+60199594 | None:intergenic |
| TTTGAGAGAATGACTATGGT+TGG | 0.507037 | 4_2:-60198332 | Msa0611800:three_prime_UTR |
| ACAAATGTTAGAGGGACAAT+GGG | 0.521045 | 4_2:-60198601 | Msa0611800:CDS |
| CAAGTTGAAAATGGAACAGA+AGG | 0.529466 | 4_2:-60198463 | Msa0611800:CDS |
| GGCATTTGGCTCATAATGCC+AGG | 0.529851 | 4_2:+60199387 | None:intergenic |
| CTTCATACTAAGAAAGAAGA+AGG | 0.534068 | 4_2:-60199491 | Msa0611800:five_prime_UTR |
| CATTAACAACTTCAACATCA+TGG | 0.537170 | 4_2:+60198366 | None:intergenic |
| CACAAATGTTAGAGGGACAA+TGG | 0.540064 | 4_2:-60198602 | Msa0611800:CDS |
| GTTCTATATTGAGCAAAAGA+GGG | 0.544118 | 4_2:-60198410 | Msa0611800:CDS |
| TGCAAAGGTGTTGCAGATGT+CGG | 0.550893 | 4_2:-60198267 | Msa0611800:three_prime_UTR |
| CAAAGAGCAAACATACTTTG+TGG | 0.551845 | 4_2:-60198031 | Msa0611800:three_prime_UTR |
| TATTCCTTCTATGAGATACC+TGG | 0.561675 | 4_2:-60199405 | Msa0611800:five_prime_UTR |
| ATACACATTATAATGAAGCC+AGG | 0.562281 | 4_2:+60199867 | None:intergenic |
| TCCATCTAACTCAAAATGGA+AGG | 0.576928 | 4_2:+60199649 | None:intergenic |
| TGGGATGTTTGGCACCAGAA+TGG | 0.578599 | 4_2:-60198582 | Msa0611800:CDS |
| CTTTAATTGTGCTTCTGATG+AGG | 0.580908 | 4_2:-60199569 | Msa0611800:five_prime_UTR |
| TCAGAGTATGATGCTTAGAG+TGG | 0.595054 | 4_2:-60199674 | Msa0611800:five_prime_UTR |
| GTGCTTCTGATGAGGAAGAA+AGG | 0.605953 | 4_2:-60199561 | Msa0611800:five_prime_UTR |
| AAGGTGTTGCAGATGTCGGA+AGG | 0.614948 | 4_2:-60198263 | Msa0611800:three_prime_UTR |
| TATTAGGCCATCTATTGCAA+AGG | 0.622506 | 4_2:-60198282 | Msa0611800:three_prime_UTR |
| GTGGTCCTTAAATATGTGAG+AGG | 0.625201 | 4_2:-60198012 | Msa0611800:three_prime_UTR |
| TTCTATATTGAGCAAAAGAG+GGG | 0.627164 | 4_2:-60198409 | Msa0611800:CDS |
| GAACAAGCACAAATGTTAGA+GGG | 0.627687 | 4_2:-60198609 | Msa0611800:CDS |
| TTAATGGCAACAGGCAGTGG+CGG | 0.648108 | 4_2:+60199366 | None:intergenic |
| CGTTAATGGAGAGAAAGCCA+AGG | 0.651353 | 4_2:+60200006 | None:intergenic |
| GAAGGAACACGATAATATGG+TGG | 0.676501 | 4_2:-60199473 | Msa0611800:five_prime_UTR |
| GTTAATGGAGAGAAAGCCAA+GGG | 0.684337 | 4_2:+60200007 | None:intergenic |
| GAATGACTATGGTTGGACTG+TGG | 0.741878 | 4_2:-60198325 | Msa0611800:three_prime_UTR |
| ATATGCAAGAAAGTGTACGA+TGG | 0.790834 | 4_2:+60198710 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACAAAAAAAAAAAACAAA+TGG | + | chr4_2:60198926-60198945 | None:intergenic | 15.0% |
| !!! | TATGCAAATCATTTTTAAAA+AGG | + | chr4_2:60199273-60199292 | None:intergenic | 15.0% |
| !!! | TGTATATGATATTTTTTCAA+AGG | + | chr4_2:60199337-60199356 | None:intergenic | 15.0% |
| !! | ACACAAAAAAAAAAAACAAA+TGG | + | chr4_2:60198926-60198945 | None:intergenic | 15.0% |
| !!! | TATGCAAATCATTTTTAAAA+AGG | + | chr4_2:60199273-60199292 | None:intergenic | 15.0% |
| !!! | TGTATATGATATTTTTTCAA+AGG | + | chr4_2:60199337-60199356 | None:intergenic | 15.0% |
| !!! | GATTGAATGCTATTTATTTT+TGG | - | chr4_2:60198022-60198041 | Msa0611800:three_prime_UTR | 20.0% |
| !! | CAGATTATAATCTATTAAGT+TGG | - | chr4_2:60198049-60198068 | Msa0611800:three_prime_UTR | 20.0% |
| !! | AAGAAAGAATCATACAAATA+TGG | + | chr4_2:60198410-60198429 | None:intergenic | 20.0% |
| !! | TTCTTTCTTGTCTAATTATA+TGG | - | chr4_2:60198421-60198440 | Msa0611800:CDS | 20.0% |
| !! | AAAGTTTCTATAGATAAAGA+AGG | + | chr4_2:60198570-60198589 | None:intergenic | 20.0% |
| !! | ATTTCATTAAATAATGCACT+TGG | + | chr4_2:60198949-60198968 | None:intergenic | 20.0% |
| !! | AATTAAATTGAAACATAGTG+TGG | + | chr4_2:60199008-60199027 | None:intergenic | 20.0% |
| !!! | ATTGATTTACCTAATTAGTT+TGG | - | chr4_2:60199025-60199044 | Msa0611800:intron | 20.0% |
| !!! | TTGAAATCTTATTTTGTAGA+AGG | - | chr4_2:60199660-60199679 | Msa0611800:five_prime_UTR | 20.0% |
| !!! | ACATGATACTTATAGATTTT+GGG | - | chr4_2:60199729-60199748 | Msa0611800:intron | 20.0% |
| !! | AAGTTGTTAATGATTTCTTT+AGG | - | chr4_2:60199806-60199825 | Msa0611800:intron | 20.0% |
| !!! | AAAATTTTTCCATCAAACAA+TGG | + | chr4_2:60199946-60199965 | None:intergenic | 20.0% |
| !!! | TAAGTCACCAAATATATTTT+CGG | - | chr4_2:60200034-60200053 | Msa0611800:five_prime_UTR | 20.0% |
| !!! | GATTGAATGCTATTTATTTT+TGG | - | chr4_2:60198022-60198041 | Msa0611800:three_prime_UTR | 20.0% |
| !! | CAGATTATAATCTATTAAGT+TGG | - | chr4_2:60198049-60198068 | Msa0611800:three_prime_UTR | 20.0% |
| !! | AAGAAAGAATCATACAAATA+TGG | + | chr4_2:60198410-60198429 | None:intergenic | 20.0% |
| !! | TTCTTTCTTGTCTAATTATA+TGG | - | chr4_2:60198421-60198440 | Msa0611800:CDS | 20.0% |
| !! | AAAGTTTCTATAGATAAAGA+AGG | + | chr4_2:60198570-60198589 | None:intergenic | 20.0% |
| !! | ATTTCATTAAATAATGCACT+TGG | + | chr4_2:60198949-60198968 | None:intergenic | 20.0% |
| !! | AATTAAATTGAAACATAGTG+TGG | + | chr4_2:60199008-60199027 | None:intergenic | 20.0% |
| !!! | ATTGATTTACCTAATTAGTT+TGG | - | chr4_2:60199025-60199044 | Msa0611800:intron | 20.0% |
| !!! | TTGAAATCTTATTTTGTAGA+AGG | - | chr4_2:60199660-60199679 | Msa0611800:five_prime_UTR | 20.0% |
| !!! | ACATGATACTTATAGATTTT+GGG | - | chr4_2:60199729-60199748 | Msa0611800:intron | 20.0% |
| !! | AAGTTGTTAATGATTTCTTT+AGG | - | chr4_2:60199806-60199825 | Msa0611800:intron | 20.0% |
| !!! | AAAATTTTTCCATCAAACAA+TGG | + | chr4_2:60199946-60199965 | None:intergenic | 20.0% |
| !!! | TAAGTCACCAAATATATTTT+CGG | - | chr4_2:60200034-60200053 | Msa0611800:five_prime_UTR | 20.0% |
| ! | TCACTTATCTTATTCTTTCA+GGG | - | chr4_2:60198079-60198098 | Msa0611800:three_prime_UTR | 25.0% |
| ! | TAATGTGTATTAGAATTGCT+TGG | - | chr4_2:60198307-60198326 | Msa0611800:three_prime_UTR | 25.0% |
| ! | AATGTGTATTAGAATTGCTT+GGG | - | chr4_2:60198308-60198327 | Msa0611800:three_prime_UTR | 25.0% |
| ! | AGAAATAAAAATAGAGAGCA+TGG | + | chr4_2:60198360-60198379 | None:intergenic | 25.0% |
| !!! | GATTAATTTTTGTTTGCAGA+TGG | - | chr4_2:60198454-60198473 | Msa0611800:CDS | 25.0% |
| ! | TATTGAAAGATCTTCGTTAA+TGG | + | chr4_2:60198814-60198833 | None:intergenic | 25.0% |
| !! | CATTTTGCCTAATAGAATTT+AGG | - | chr4_2:60198836-60198855 | Msa0611800:intron | 25.0% |
| ! | GAACTTACCTAAATTCTATT+AGG | + | chr4_2:60198846-60198865 | None:intergenic | 25.0% |
| ! | ATAGAATTTAGGTAAGTTCT+TGG | - | chr4_2:60198847-60198866 | Msa0611800:intron | 25.0% |
| ! | TTCAAACTTCCAAACTAATT+AGG | + | chr4_2:60199037-60199056 | None:intergenic | 25.0% |
| ! | CTAATTTCAACTTATTAGGA+AGG | + | chr4_2:60199087-60199106 | None:intergenic | 25.0% |
| ! | CTCACTAATTTCAACTTATT+AGG | + | chr4_2:60199091-60199110 | None:intergenic | 25.0% |
| !! | CTAATAAGTTGAAATTAGTG+AGG | - | chr4_2:60199089-60199108 | Msa0611800:intron | 25.0% |
| !!! | ATTAGTGAGGTTTTTCAATT+TGG | - | chr4_2:60199102-60199121 | Msa0611800:intron | 25.0% |
| ! | ATAGTATGACCTAATAATCA+CGG | - | chr4_2:60199162-60199181 | Msa0611800:intron | 25.0% |
| ! | ATATAGAAACCGTGATTATT+AGG | + | chr4_2:60199174-60199193 | None:intergenic | 25.0% |
| !! | TGCATATTCATTATGCATTT+TGG | - | chr4_2:60199287-60199306 | Msa0611800:intron | 25.0% |
| !! | CTCAAAATTAAAGCATGTTT+TGG | - | chr4_2:60199497-60199516 | Msa0611800:five_prime_UTR | 25.0% |
| !!! | AATTAAAGCATGTTTTGGAA+TGG | - | chr4_2:60199502-60199521 | Msa0611800:five_prime_UTR | 25.0% |
| !! | GACATGATACTTATAGATTT+TGG | - | chr4_2:60199728-60199747 | Msa0611800:intron | 25.0% |
| !! | AAGTCACCAAATATATTTTC+GGG | - | chr4_2:60200035-60200054 | Msa0611800:five_prime_UTR | 25.0% |
| ! | GAAAAACCCGAAAATATATT+TGG | + | chr4_2:60200044-60200063 | None:intergenic | 25.0% |
| !!! | ATATATTTTCGGGTTTTTCA+TGG | - | chr4_2:60200045-60200064 | Msa0611800:five_prime_UTR | 25.0% |
| ! | TTAGCTTACAATTAACTGAT+AGG | + | chr4_2:60200091-60200110 | None:intergenic | 25.0% |
| ! | TCACTTATCTTATTCTTTCA+GGG | - | chr4_2:60198079-60198098 | Msa0611800:three_prime_UTR | 25.0% |
| ! | TAATGTGTATTAGAATTGCT+TGG | - | chr4_2:60198307-60198326 | Msa0611800:three_prime_UTR | 25.0% |
| ! | AATGTGTATTAGAATTGCTT+GGG | - | chr4_2:60198308-60198327 | Msa0611800:three_prime_UTR | 25.0% |
| ! | AGAAATAAAAATAGAGAGCA+TGG | + | chr4_2:60198360-60198379 | None:intergenic | 25.0% |
| !!! | GATTAATTTTTGTTTGCAGA+TGG | - | chr4_2:60198454-60198473 | Msa0611800:CDS | 25.0% |
| ! | TATTGAAAGATCTTCGTTAA+TGG | + | chr4_2:60198814-60198833 | None:intergenic | 25.0% |
| !! | CATTTTGCCTAATAGAATTT+AGG | - | chr4_2:60198836-60198855 | Msa0611800:intron | 25.0% |
| ! | GAACTTACCTAAATTCTATT+AGG | + | chr4_2:60198846-60198865 | None:intergenic | 25.0% |
| ! | ATAGAATTTAGGTAAGTTCT+TGG | - | chr4_2:60198847-60198866 | Msa0611800:intron | 25.0% |
| ! | TTCAAACTTCCAAACTAATT+AGG | + | chr4_2:60199037-60199056 | None:intergenic | 25.0% |
| ! | CTAATTTCAACTTATTAGGA+AGG | + | chr4_2:60199087-60199106 | None:intergenic | 25.0% |
| ! | CTCACTAATTTCAACTTATT+AGG | + | chr4_2:60199091-60199110 | None:intergenic | 25.0% |
| !! | CTAATAAGTTGAAATTAGTG+AGG | - | chr4_2:60199089-60199108 | Msa0611800:intron | 25.0% |
| !!! | ATTAGTGAGGTTTTTCAATT+TGG | - | chr4_2:60199102-60199121 | Msa0611800:intron | 25.0% |
| ! | ATAGTATGACCTAATAATCA+CGG | - | chr4_2:60199162-60199181 | Msa0611800:intron | 25.0% |
| ! | ATATAGAAACCGTGATTATT+AGG | + | chr4_2:60199174-60199193 | None:intergenic | 25.0% |
| !! | TGCATATTCATTATGCATTT+TGG | - | chr4_2:60199287-60199306 | Msa0611800:intron | 25.0% |
| !! | CTCAAAATTAAAGCATGTTT+TGG | - | chr4_2:60199497-60199516 | Msa0611800:five_prime_UTR | 25.0% |
| !!! | AATTAAAGCATGTTTTGGAA+TGG | - | chr4_2:60199502-60199521 | Msa0611800:five_prime_UTR | 25.0% |
| !! | GACATGATACTTATAGATTT+TGG | - | chr4_2:60199728-60199747 | Msa0611800:intron | 25.0% |
| !! | AAGTCACCAAATATATTTTC+GGG | - | chr4_2:60200035-60200054 | Msa0611800:five_prime_UTR | 25.0% |
| ! | GAAAAACCCGAAAATATATT+TGG | + | chr4_2:60200044-60200063 | None:intergenic | 25.0% |
| !!! | ATATATTTTCGGGTTTTTCA+TGG | - | chr4_2:60200045-60200064 | Msa0611800:five_prime_UTR | 25.0% |
| ! | TTAGCTTACAATTAACTGAT+AGG | + | chr4_2:60200091-60200110 | None:intergenic | 25.0% |
| GAACATAGTCAACTTCTAAT+GGG | - | chr4_2:60197976-60197995 | Msa0611800:three_prime_UTR | 30.0% | |
| CTCACTTATCTTATTCTTTC+AGG | - | chr4_2:60198078-60198097 | Msa0611800:three_prime_UTR | 30.0% | |
| TTATCTTATTCTTTCAGGGA+AGG | - | chr4_2:60198083-60198102 | Msa0611800:three_prime_UTR | 30.0% | |
| TATCTTATTCTTTCAGGGAA+GGG | - | chr4_2:60198084-60198103 | Msa0611800:three_prime_UTR | 30.0% | |
| TAGAGCTGAAAAAAGAGAAT+GGG | + | chr4_2:60198244-60198263 | None:intergenic | 30.0% | |
| ATAGAGCTGAAAAAAGAGAA+TGG | + | chr4_2:60198245-60198264 | None:intergenic | 30.0% | |
| !! | AGCTCTATTTCTATCTGAAA+AGG | - | chr4_2:60198257-60198276 | Msa0611800:three_prime_UTR | 30.0% |
| ATGAAGCCAGGAAAATTAAA+AGG | + | chr4_2:60198285-60198304 | None:intergenic | 30.0% | |
| ATACACATTATAATGAAGCC+AGG | + | chr4_2:60198297-60198316 | None:intergenic | 30.0% | |
| TATGTCCATCTAACTCAAAA+TGG | + | chr4_2:60198519-60198538 | None:intergenic | 30.0% | |
| CTTCATACTAAGAAAGAAGA+AGG | - | chr4_2:60198670-60198689 | Msa0611800:five_prime_UTR | 30.0% | |
| AAATTGAAACATAGTGTGGT+TGG | + | chr4_2:60199004-60199023 | None:intergenic | 30.0% | |
| ACTTATTAGGAAGGATAAAG+AGG | + | chr4_2:60199078-60199097 | None:intergenic | 30.0% | |
| ATCTCATTCAGCCAAAAATA+TGG | + | chr4_2:60199144-60199163 | None:intergenic | 30.0% | |
| GTTCTATATTGAGCAAAAGA+GGG | - | chr4_2:60199751-60199770 | Msa0611800:intron | 30.0% | |
| TTCTATATTGAGCAAAAGAG+GGG | - | chr4_2:60199752-60199771 | Msa0611800:intron | 30.0% | |
| CATTAACAACTTCAACATCA+TGG | + | chr4_2:60199798-60199817 | None:intergenic | 30.0% | |
| ! | ATTTTTCCATCAAACAATGG+TGG | + | chr4_2:60199943-60199962 | None:intergenic | 30.0% |
| ACAAAATAGAGAGCAAGAAT+TGG | + | chr4_2:60199973-60199992 | None:intergenic | 30.0% | |
| GAACATAGTCAACTTCTAAT+GGG | - | chr4_2:60197976-60197995 | Msa0611800:three_prime_UTR | 30.0% | |
| CTCACTTATCTTATTCTTTC+AGG | - | chr4_2:60198078-60198097 | Msa0611800:three_prime_UTR | 30.0% | |
| TTATCTTATTCTTTCAGGGA+AGG | - | chr4_2:60198083-60198102 | Msa0611800:three_prime_UTR | 30.0% | |
| TATCTTATTCTTTCAGGGAA+GGG | - | chr4_2:60198084-60198103 | Msa0611800:three_prime_UTR | 30.0% | |
| TAGAGCTGAAAAAAGAGAAT+GGG | + | chr4_2:60198244-60198263 | None:intergenic | 30.0% | |
| ATAGAGCTGAAAAAAGAGAA+TGG | + | chr4_2:60198245-60198264 | None:intergenic | 30.0% | |
| !! | AGCTCTATTTCTATCTGAAA+AGG | - | chr4_2:60198257-60198276 | Msa0611800:three_prime_UTR | 30.0% |
| ATGAAGCCAGGAAAATTAAA+AGG | + | chr4_2:60198285-60198304 | None:intergenic | 30.0% | |
| ATACACATTATAATGAAGCC+AGG | + | chr4_2:60198297-60198316 | None:intergenic | 30.0% | |
| TATGTCCATCTAACTCAAAA+TGG | + | chr4_2:60198519-60198538 | None:intergenic | 30.0% | |
| CTTCATACTAAGAAAGAAGA+AGG | - | chr4_2:60198670-60198689 | Msa0611800:five_prime_UTR | 30.0% | |
| AAATTGAAACATAGTGTGGT+TGG | + | chr4_2:60199004-60199023 | None:intergenic | 30.0% | |
| ACTTATTAGGAAGGATAAAG+AGG | + | chr4_2:60199078-60199097 | None:intergenic | 30.0% | |
| ATCTCATTCAGCCAAAAATA+TGG | + | chr4_2:60199144-60199163 | None:intergenic | 30.0% | |
| GTTCTATATTGAGCAAAAGA+GGG | - | chr4_2:60199751-60199770 | Msa0611800:intron | 30.0% | |
| TTCTATATTGAGCAAAAGAG+GGG | - | chr4_2:60199752-60199771 | Msa0611800:intron | 30.0% | |
| CATTAACAACTTCAACATCA+TGG | + | chr4_2:60199798-60199817 | None:intergenic | 30.0% | |
| ! | ATTTTTCCATCAAACAATGG+TGG | + | chr4_2:60199943-60199962 | None:intergenic | 30.0% |
| ACAAAATAGAGAGCAAGAAT+TGG | + | chr4_2:60199973-60199992 | None:intergenic | 30.0% | |
| GGAACATAGTCAACTTCTAA+TGG | - | chr4_2:60197975-60197994 | Msa0611800:three_prime_UTR | 35.0% | |
| CTGTAGTAATGTGAACATGA+TGG | + | chr4_2:60198204-60198223 | None:intergenic | 35.0% | |
| !!! | AAGGCACCTTTTAATTTTCC+TGG | - | chr4_2:60198276-60198295 | Msa0611800:three_prime_UTR | 35.0% |
| !!! | TCCTTCCATTTTGAGTTAGA+TGG | - | chr4_2:60198511-60198530 | Msa0611800:CDS | 35.0% |
| TCCATCTAACTCAAAATGGA+AGG | + | chr4_2:60198515-60198534 | None:intergenic | 35.0% | |
| CTTTAATTGTGCTTCTGATG+AGG | - | chr4_2:60198592-60198611 | Msa0611800:CDS | 35.0% | |
| GAAGAAGGAACACGATAATA+TGG | - | chr4_2:60198685-60198704 | Msa0611800:five_prime_UTR | 35.0% | |
| TATTCCTTCTATGAGATACC+TGG | - | chr4_2:60198756-60198775 | Msa0611800:five_prime_UTR | 35.0% | |
| ! | TTCAAGTGCAGCCATATTTT+TGG | - | chr4_2:60199130-60199149 | Msa0611800:intron | 35.0% |
| !! | AGCAGTATTTTTGATCTAGC+AGG | - | chr4_2:60199385-60199404 | Msa0611800:five_prime_UTR | 35.0% |
| TGTACGATGGTGTTTAAACT+TGG | + | chr4_2:60199441-60199460 | None:intergenic | 35.0% | |
| ! | ATATGCAAGAAAGTGTACGA+TGG | + | chr4_2:60199454-60199473 | None:intergenic | 35.0% |
| AGAACAAGCACAAATGTTAG+AGG | - | chr4_2:60199551-60199570 | Msa0611800:five_prime_UTR | 35.0% | |
| GAACAAGCACAAATGTTAGA+GGG | - | chr4_2:60199552-60199571 | Msa0611800:five_prime_UTR | 35.0% | |
| ACAAATGTTAGAGGGACAAT+GGG | - | chr4_2:60199560-60199579 | Msa0611800:five_prime_UTR | 35.0% | |
| !! | ATATCCACTTTTGCAGTGAT+AGG | + | chr4_2:60199617-60199636 | None:intergenic | 35.0% |
| AAAGTGGATATCTACAGCTT+TGG | - | chr4_2:60199626-60199645 | Msa0611800:five_prime_UTR | 35.0% | |
| !! | GAGTTGCATCAAGTTGAAAA+TGG | - | chr4_2:60199689-60199708 | Msa0611800:five_prime_UTR | 35.0% |
| ! | CAAGTTGAAAATGGAACAGA+AGG | - | chr4_2:60199698-60199717 | Msa0611800:intron | 35.0% |
| GGTTCTATATTGAGCAAAAG+AGG | - | chr4_2:60199750-60199769 | Msa0611800:intron | 35.0% | |
| TAGGTTTGAGAGAATGACTA+TGG | - | chr4_2:60199825-60199844 | Msa0611800:intron | 35.0% | |
| TTTGAGAGAATGACTATGGT+TGG | - | chr4_2:60199829-60199848 | Msa0611800:intron | 35.0% | |
| TGTGCCTTAATCCAACTATT+AGG | - | chr4_2:60199863-60199882 | Msa0611800:five_prime_UTR | 35.0% | |
| ATGGCCTAATAGTTGGATTA+AGG | + | chr4_2:60199870-60199889 | None:intergenic | 35.0% | |
| TATTAGGCCATCTATTGCAA+AGG | - | chr4_2:60199879-60199898 | Msa0611800:five_prime_UTR | 35.0% | |
| CTGATAGGAGAAAGAGAAAA+AGG | + | chr4_2:60200076-60200095 | None:intergenic | 35.0% | |
| CAAAGAGCAAACATACTTTG+TGG | - | chr4_2:60200130-60200149 | Msa0611800:five_prime_UTR | 35.0% | |
| GACAACCTCTCACATATTTA+AGG | + | chr4_2:60200157-60200176 | None:intergenic | 35.0% | |
| GGAACATAGTCAACTTCTAA+TGG | - | chr4_2:60197975-60197994 | Msa0611800:three_prime_UTR | 35.0% | |
| CTGTAGTAATGTGAACATGA+TGG | + | chr4_2:60198204-60198223 | None:intergenic | 35.0% | |
| !!! | AAGGCACCTTTTAATTTTCC+TGG | - | chr4_2:60198276-60198295 | Msa0611800:three_prime_UTR | 35.0% |
| !!! | TCCTTCCATTTTGAGTTAGA+TGG | - | chr4_2:60198511-60198530 | Msa0611800:CDS | 35.0% |
| TCCATCTAACTCAAAATGGA+AGG | + | chr4_2:60198515-60198534 | None:intergenic | 35.0% | |
| CTTTAATTGTGCTTCTGATG+AGG | - | chr4_2:60198592-60198611 | Msa0611800:CDS | 35.0% | |
| GAAGAAGGAACACGATAATA+TGG | - | chr4_2:60198685-60198704 | Msa0611800:five_prime_UTR | 35.0% | |
| TATTCCTTCTATGAGATACC+TGG | - | chr4_2:60198756-60198775 | Msa0611800:five_prime_UTR | 35.0% | |
| ! | TTCAAGTGCAGCCATATTTT+TGG | - | chr4_2:60199130-60199149 | Msa0611800:intron | 35.0% |
| !! | AGCAGTATTTTTGATCTAGC+AGG | - | chr4_2:60199385-60199404 | Msa0611800:five_prime_UTR | 35.0% |
| TGTACGATGGTGTTTAAACT+TGG | + | chr4_2:60199441-60199460 | None:intergenic | 35.0% | |
| ! | ATATGCAAGAAAGTGTACGA+TGG | + | chr4_2:60199454-60199473 | None:intergenic | 35.0% |
| AGAACAAGCACAAATGTTAG+AGG | - | chr4_2:60199551-60199570 | Msa0611800:five_prime_UTR | 35.0% | |
| GAACAAGCACAAATGTTAGA+GGG | - | chr4_2:60199552-60199571 | Msa0611800:five_prime_UTR | 35.0% | |
| ACAAATGTTAGAGGGACAAT+GGG | - | chr4_2:60199560-60199579 | Msa0611800:five_prime_UTR | 35.0% | |
| !! | ATATCCACTTTTGCAGTGAT+AGG | + | chr4_2:60199617-60199636 | None:intergenic | 35.0% |
| AAAGTGGATATCTACAGCTT+TGG | - | chr4_2:60199626-60199645 | Msa0611800:five_prime_UTR | 35.0% | |
| !! | GAGTTGCATCAAGTTGAAAA+TGG | - | chr4_2:60199689-60199708 | Msa0611800:five_prime_UTR | 35.0% |
| ! | CAAGTTGAAAATGGAACAGA+AGG | - | chr4_2:60199698-60199717 | Msa0611800:intron | 35.0% |
| GGTTCTATATTGAGCAAAAG+AGG | - | chr4_2:60199750-60199769 | Msa0611800:intron | 35.0% | |
| TAGGTTTGAGAGAATGACTA+TGG | - | chr4_2:60199825-60199844 | Msa0611800:intron | 35.0% | |
| TTTGAGAGAATGACTATGGT+TGG | - | chr4_2:60199829-60199848 | Msa0611800:intron | 35.0% | |
| TGTGCCTTAATCCAACTATT+AGG | - | chr4_2:60199863-60199882 | Msa0611800:five_prime_UTR | 35.0% | |
| ATGGCCTAATAGTTGGATTA+AGG | + | chr4_2:60199870-60199889 | None:intergenic | 35.0% | |
| TATTAGGCCATCTATTGCAA+AGG | - | chr4_2:60199879-60199898 | Msa0611800:five_prime_UTR | 35.0% | |
| CTGATAGGAGAAAGAGAAAA+AGG | + | chr4_2:60200076-60200095 | None:intergenic | 35.0% | |
| CAAAGAGCAAACATACTTTG+TGG | - | chr4_2:60200130-60200149 | Msa0611800:five_prime_UTR | 35.0% | |
| GACAACCTCTCACATATTTA+AGG | + | chr4_2:60200157-60200176 | None:intergenic | 35.0% | |
| TGCACATATTGTATCTCCCT+TGG | - | chr4_2:60198138-60198157 | Msa0611800:three_prime_UTR | 40.0% | |
| GTTAATGGAGAGAAAGCCAA+GGG | + | chr4_2:60198157-60198176 | None:intergenic | 40.0% | |
| ! | CTTGGCTTTCTCTCCATTAA+CGG | - | chr4_2:60198156-60198175 | Msa0611800:three_prime_UTR | 40.0% |
| ! | TTGGCTTTCTCTCCATTAAC+GGG | - | chr4_2:60198157-60198176 | Msa0611800:three_prime_UTR | 40.0% |
| TCAGAGTATGATGCTTAGAG+TGG | - | chr4_2:60198487-60198506 | Msa0611800:CDS | 40.0% | |
| GAAGGAACACGATAATATGG+TGG | - | chr4_2:60198688-60198707 | Msa0611800:five_prime_UTR | 40.0% | |
| AATGCCAGGTATCTCATAGA+AGG | + | chr4_2:60198763-60198782 | None:intergenic | 40.0% | |
| AGATCTTCGTTAATGGCAAC+AGG | + | chr4_2:60198807-60198826 | None:intergenic | 40.0% | |
| TCTGTCTTTCATTAGCAGCT+TGG | + | chr4_2:60199528-60199547 | None:intergenic | 40.0% | |
| CACAAATGTTAGAGGGACAA+TGG | - | chr4_2:60199559-60199578 | Msa0611800:five_prime_UTR | 40.0% | |
| GCAATAGATGGCCTAATAGT+TGG | + | chr4_2:60199877-60199896 | None:intergenic | 40.0% | |
| TGCAACACCTTTGCAATAGA+TGG | + | chr4_2:60199889-60199908 | None:intergenic | 40.0% | |
| AGTGTTCCACCATTGTTTGA+TGG | - | chr4_2:60199934-60199953 | Msa0611800:intron | 40.0% | |
| GTGGTCCTTAAATATGTGAG+AGG | - | chr4_2:60200149-60200168 | Msa0611800:five_prime_UTR | 40.0% | |
| TGCACATATTGTATCTCCCT+TGG | - | chr4_2:60198138-60198157 | Msa0611800:three_prime_UTR | 40.0% | |
| GTTAATGGAGAGAAAGCCAA+GGG | + | chr4_2:60198157-60198176 | None:intergenic | 40.0% | |
| ! | CTTGGCTTTCTCTCCATTAA+CGG | - | chr4_2:60198156-60198175 | Msa0611800:three_prime_UTR | 40.0% |
| ! | TTGGCTTTCTCTCCATTAAC+GGG | - | chr4_2:60198157-60198176 | Msa0611800:three_prime_UTR | 40.0% |
| TCAGAGTATGATGCTTAGAG+TGG | - | chr4_2:60198487-60198506 | Msa0611800:CDS | 40.0% | |
| GAAGGAACACGATAATATGG+TGG | - | chr4_2:60198688-60198707 | Msa0611800:five_prime_UTR | 40.0% | |
| AATGCCAGGTATCTCATAGA+AGG | + | chr4_2:60198763-60198782 | None:intergenic | 40.0% | |
| AGATCTTCGTTAATGGCAAC+AGG | + | chr4_2:60198807-60198826 | None:intergenic | 40.0% | |
| TCTGTCTTTCATTAGCAGCT+TGG | + | chr4_2:60199528-60199547 | None:intergenic | 40.0% | |
| CACAAATGTTAGAGGGACAA+TGG | - | chr4_2:60199559-60199578 | Msa0611800:five_prime_UTR | 40.0% | |
| GCAATAGATGGCCTAATAGT+TGG | + | chr4_2:60199877-60199896 | None:intergenic | 40.0% | |
| TGCAACACCTTTGCAATAGA+TGG | + | chr4_2:60199889-60199908 | None:intergenic | 40.0% | |
| AGTGTTCCACCATTGTTTGA+TGG | - | chr4_2:60199934-60199953 | Msa0611800:intron | 40.0% | |
| GTGGTCCTTAAATATGTGAG+AGG | - | chr4_2:60200149-60200168 | Msa0611800:five_prime_UTR | 40.0% | |
| CGTTAATGGAGAGAAAGCCA+AGG | + | chr4_2:60198158-60198177 | None:intergenic | 45.0% | |
| ACTTTCCACTCACCCGTTAA+TGG | + | chr4_2:60198172-60198191 | None:intergenic | 45.0% | |
| GTGCTTCTGATGAGGAAGAA+AGG | - | chr4_2:60198600-60198619 | Msa0611800:CDS | 45.0% | |
| ! | GATAAAGAGGTGTGACAGCA+AGG | + | chr4_2:60199065-60199084 | None:intergenic | 45.0% |
| TCACTGTCGAGAAAGATGCT+CGG | + | chr4_2:60199232-60199251 | None:intergenic | 45.0% | |
| TAGAGGGACAATGGGATGTT+TGG | - | chr4_2:60199568-60199587 | Msa0611800:five_prime_UTR | 45.0% | |
| !! | GGTGCATTTTTGAGCCATTC+TGG | + | chr4_2:60199596-60199615 | None:intergenic | 45.0% |
| TGCACCTATCACTGCAAAAG+TGG | - | chr4_2:60199610-60199629 | Msa0611800:five_prime_UTR | 45.0% | |
| GAATGACTATGGTTGGACTG+TGG | - | chr4_2:60199836-60199855 | Msa0611800:intron | 45.0% | |
| !! | TGCAAAGGTGTTGCAGATGT+CGG | - | chr4_2:60199894-60199913 | Msa0611800:five_prime_UTR | 45.0% |
| CGTTAATGGAGAGAAAGCCA+AGG | + | chr4_2:60198158-60198177 | None:intergenic | 45.0% | |
| ACTTTCCACTCACCCGTTAA+TGG | + | chr4_2:60198172-60198191 | None:intergenic | 45.0% | |
| GTGCTTCTGATGAGGAAGAA+AGG | - | chr4_2:60198600-60198619 | Msa0611800:CDS | 45.0% | |
| ! | GATAAAGAGGTGTGACAGCA+AGG | + | chr4_2:60199065-60199084 | None:intergenic | 45.0% |
| TCACTGTCGAGAAAGATGCT+CGG | + | chr4_2:60199232-60199251 | None:intergenic | 45.0% | |
| TAGAGGGACAATGGGATGTT+TGG | - | chr4_2:60199568-60199587 | Msa0611800:five_prime_UTR | 45.0% | |
| !! | GGTGCATTTTTGAGCCATTC+TGG | + | chr4_2:60199596-60199615 | None:intergenic | 45.0% |
| TGCACCTATCACTGCAAAAG+TGG | - | chr4_2:60199610-60199629 | Msa0611800:five_prime_UTR | 45.0% | |
| GAATGACTATGGTTGGACTG+TGG | - | chr4_2:60199836-60199855 | Msa0611800:intron | 45.0% | |
| !! | TGCAAAGGTGTTGCAGATGT+CGG | - | chr4_2:60199894-60199913 | Msa0611800:five_prime_UTR | 45.0% |
| TTCTTTCAGGGAAGGGCTCA+TGG | - | chr4_2:60198091-60198110 | Msa0611800:three_prime_UTR | 50.0% | |
| ! | TCTCTCCATTAACGGGTGAG+TGG | - | chr4_2:60198164-60198183 | Msa0611800:three_prime_UTR | 50.0% |
| ! | GGCATTTGGCTCATAATGCC+AGG | + | chr4_2:60198777-60198796 | None:intergenic | 50.0% |
| TTAATGGCAACAGGCAGTGG+CGG | + | chr4_2:60198798-60198817 | None:intergenic | 50.0% | |
| TCGTTAATGGCAACAGGCAG+TGG | + | chr4_2:60198801-60198820 | None:intergenic | 50.0% | |
| TGGGATGTTTGGCACCAGAA+TGG | - | chr4_2:60199579-60199598 | Msa0611800:five_prime_UTR | 50.0% | |
| !! | AAGGTGTTGCAGATGTCGGA+AGG | - | chr4_2:60199898-60199917 | Msa0611800:five_prime_UTR | 50.0% |
| TTCTTTCAGGGAAGGGCTCA+TGG | - | chr4_2:60198091-60198110 | Msa0611800:three_prime_UTR | 50.0% | |
| ! | TCTCTCCATTAACGGGTGAG+TGG | - | chr4_2:60198164-60198183 | Msa0611800:three_prime_UTR | 50.0% |
| ! | GGCATTTGGCTCATAATGCC+AGG | + | chr4_2:60198777-60198796 | None:intergenic | 50.0% |
| TTAATGGCAACAGGCAGTGG+CGG | + | chr4_2:60198798-60198817 | None:intergenic | 50.0% | |
| TCGTTAATGGCAACAGGCAG+TGG | + | chr4_2:60198801-60198820 | None:intergenic | 50.0% | |
| TGGGATGTTTGGCACCAGAA+TGG | - | chr4_2:60199579-60199598 | Msa0611800:five_prime_UTR | 50.0% | |
| !! | AAGGTGTTGCAGATGTCGGA+AGG | - | chr4_2:60199898-60199917 | Msa0611800:five_prime_UTR | 50.0% |
| AGGGCTCATGGTTGCATCTC+AGG | - | chr4_2:60198103-60198122 | Msa0611800:three_prime_UTR | 55.0% | |
| ! | CGAGAAAGATGCTCGGTGAG+TGG | + | chr4_2:60199225-60199244 | None:intergenic | 55.0% |
| AGGGCTCATGGTTGCATCTC+AGG | - | chr4_2:60198103-60198122 | Msa0611800:three_prime_UTR | 55.0% | |
| ! | CGAGAAAGATGCTCGGTGAG+TGG | + | chr4_2:60199225-60199244 | None:intergenic | 55.0% |
| CAACAGGCAGTGGCGGCATT+TGG | + | chr4_2:60198791-60198810 | None:intergenic | 60.0% | |
| ! | GATGCTCGGTGAGTGGTGAC+AGG | + | chr4_2:60199218-60199237 | None:intergenic | 60.0% |
| CAACAGGCAGTGGCGGCATT+TGG | + | chr4_2:60198791-60198810 | None:intergenic | 60.0% | |
| ! | GATGCTCGGTGAGTGGTGAC+AGG | + | chr4_2:60199218-60199237 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 60197961 | 60200222 | 60197961 | ID=Msa0611800;Name=Msa0611800 |
| chr4_2 | mRNA | 60197961 | 60200222 | 60197961 | ID=Msa0611800-mRNA-1;Parent=Msa0611800;Name=Msa0611800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=756|1|1|1|0.5|0.4|5|441|86 |
| chr4_2 | exon | 60197961 | 60198776 | 60197961 | ID=Msa0611800-mRNA-1:exon:16124;Parent=Msa0611800-mRNA-1 |
| chr4_2 | exon | 60199326 | 60199710 | 60199326 | ID=Msa0611800-mRNA-1:exon:16123;Parent=Msa0611800-mRNA-1 |
| chr4_2 | exon | 60199854 | 60199924 | 60199854 | ID=Msa0611800-mRNA-1:exon:16122;Parent=Msa0611800-mRNA-1 |
| chr4_2 | exon | 60200005 | 60200083 | 60200005 | ID=Msa0611800-mRNA-1:exon:16121;Parent=Msa0611800-mRNA-1 |
| chr4_2 | exon | 60200116 | 60200222 | 60200116 | ID=Msa0611800-mRNA-1:exon:16120;Parent=Msa0611800-mRNA-1 |
| chr4_2 | five_prime_UTR | 60200116 | 60200222 | 60200116 | ID=Msa0611800-mRNA-1:five_prime_utr;Parent=Msa0611800-mRNA-1 |
| chr4_2 | five_prime_UTR | 60200005 | 60200083 | 60200005 | ID=Msa0611800-mRNA-1:five_prime_utr;Parent=Msa0611800-mRNA-1 |
| chr4_2 | five_prime_UTR | 60199854 | 60199924 | 60199854 | ID=Msa0611800-mRNA-1:five_prime_utr;Parent=Msa0611800-mRNA-1 |
| chr4_2 | five_prime_UTR | 60199326 | 60199710 | 60199326 | ID=Msa0611800-mRNA-1:five_prime_utr;Parent=Msa0611800-mRNA-1 |
| chr4_2 | five_prime_UTR | 60198663 | 60198776 | 60198663 | ID=Msa0611800-mRNA-1:five_prime_utr;Parent=Msa0611800-mRNA-1 |
| chr4_2 | CDS | 60198402 | 60198662 | 60198402 | ID=Msa0611800-mRNA-1:cds;Parent=Msa0611800-mRNA-1 |
| chr4_2 | three_prime_UTR | 60197961 | 60198401 | 60197961 | ID=Msa0611800-mRNA-1:three_prime_utr;Parent=Msa0611800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
