Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1233640 | AET01665.1 | 94.545 | 825 | 41 | 4 | 1 | 823 | 1 | 823 | 0.0 | 1597 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1233640 | sp|P38414|LOX1_LENCU | 65.079 | 819 | 240 | 11 | 37 | 823 | 62 | 866 | 0.0 | 1064 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017710 | Msa1233640 | 0.802031 | 6.804231e-49 | -8.615850e-47 |
Msa0043150 | Msa1233640 | 0.811317 | 7.437336e-51 | -8.615850e-47 |
Msa0045810 | Msa1233640 | 0.817208 | 3.714338e-52 | -8.615850e-47 |
Msa0046200 | Msa1233640 | 0.809351 | 1.975674e-50 | -8.615850e-47 |
Msa0047560 | Msa1233640 | -0.802130 | 6.493330e-49 | -8.615850e-47 |
Msa0059880 | Msa1233640 | 0.809856 | 1.538889e-50 | -8.615850e-47 |
Msa0073270 | Msa1233640 | 0.819337 | 1.224317e-52 | -8.615850e-47 |
Msa0095910 | Msa1233640 | 0.805202 | 1.496173e-49 | -8.615850e-47 |
Msa0106540 | Msa1233640 | 0.808091 | 3.671450e-50 | -8.615850e-47 |
Msa0120050 | Msa1233640 | 0.806776 | 6.978083e-50 | -8.615850e-47 |
Msa0604200 | Msa1233640 | 0.805796 | 1.123021e-49 | -8.615850e-47 |
Msa0604280 | Msa1233640 | 0.832770 | 7.819250e-56 | -8.615850e-47 |
Msa0605480 | Msa1233640 | 0.831567 | 1.551126e-55 | -8.615850e-47 |
Msa0610190 | Msa1233640 | 0.800078 | 1.706324e-48 | -8.615850e-47 |
Msa0611850 | Msa1233640 | 0.818585 | 1.815078e-52 | -8.615850e-47 |
Msa0623250 | Msa1233640 | 0.800558 | 1.362349e-48 | -8.615850e-47 |
Msa0628140 | Msa1233640 | 0.815481 | 9.041563e-52 | -8.615850e-47 |
Msa0629720 | Msa1233640 | 0.808097 | 3.660458e-50 | -8.615850e-47 |
Msa0631700 | Msa1233640 | 0.812929 | 3.309664e-51 | -8.615850e-47 |
Msa0634290 | Msa1233640 | 0.806543 | 7.818379e-50 | -8.615850e-47 |
Msa0643190 | Msa1233640 | 0.805665 | 1.196335e-49 | -8.615850e-47 |
Msa0643840 | Msa1233640 | 0.814954 | 1.184430e-51 | -8.615850e-47 |
Msa0645370 | Msa1233640 | 0.820832 | 5.567483e-53 | -8.615850e-47 |
Msa0646010 | Msa1233640 | 0.820935 | 5.273324e-53 | -8.615850e-47 |
Msa0646430 | Msa1233640 | 0.815138 | 1.077999e-51 | -8.615850e-47 |
Msa0646440 | Msa1233640 | 0.823021 | 1.733246e-53 | -8.615850e-47 |
Msa0665830 | Msa1233640 | 0.820390 | 7.033672e-53 | -8.615850e-47 |
Msa0667350 | Msa1233640 | -0.801146 | 1.033404e-48 | -8.615850e-47 |
Msa0667600 | Msa1233640 | 0.822697 | 2.062532e-53 | -8.615850e-47 |
Msa0670360 | Msa1233640 | 0.824164 | 9.363963e-54 | -8.615850e-47 |
Msa0671640 | Msa1233640 | 0.802005 | 6.888540e-49 | -8.615850e-47 |
Msa0678620 | Msa1233640 | 0.821551 | 3.802141e-53 | -8.615850e-47 |
Msa0685080 | Msa1233640 | 0.835223 | 1.901134e-56 | -8.615850e-47 |
Msa0685390 | Msa1233640 | -0.804614 | 1.984861e-49 | -8.615850e-47 |
Msa0699170 | Msa1233640 | 0.800295 | 1.540917e-48 | -8.615850e-47 |
Msa0715220 | Msa1233640 | 0.808840 | 2.540837e-50 | -8.615850e-47 |
Msa0727480 | Msa1233640 | 0.828086 | 1.093039e-54 | -8.615850e-47 |
Msa0739720 | Msa1233640 | 0.807645 | 4.568264e-50 | -8.615850e-47 |
Msa0757120 | Msa1233640 | 0.802479 | 5.502590e-49 | -8.615850e-47 |
Msa0768670 | Msa1233640 | 0.834104 | 3.635835e-56 | -8.615850e-47 |
Msa0768720 | Msa1233640 | 0.827925 | 1.194854e-54 | -8.615850e-47 |
Msa0804170 | Msa1233640 | 0.813494 | 2.488446e-51 | -8.615850e-47 |
Msa0814160 | Msa1233640 | 0.805378 | 1.373936e-49 | -8.615850e-47 |
Msa0814230 | Msa1233640 | 0.829661 | 4.543391e-55 | -8.615850e-47 |
Msa0824860 | Msa1233640 | 0.804483 | 2.113533e-49 | -8.615850e-47 |
Msa0842180 | Msa1233640 | 0.804987 | 1.659420e-49 | -8.615850e-47 |
Msa0121470 | Msa1233640 | 0.809376 | 1.951473e-50 | -8.615850e-47 |
Msa0121490 | Msa1233640 | 0.808347 | 3.238568e-50 | -8.615850e-47 |
Msa0131460 | Msa1233640 | 0.801439 | 9.000981e-49 | -8.615850e-47 |
Msa0132080 | Msa1233640 | -0.806733 | 7.127645e-50 | -8.615850e-47 |
Msa0140270 | Msa1233640 | 0.818278 | 2.130382e-52 | -8.615850e-47 |
Msa0150910 | Msa1233640 | 0.815803 | 7.665424e-52 | -8.615850e-47 |
Msa0160580 | Msa1233640 | 0.804447 | 2.151048e-49 | -8.615850e-47 |
Msa0163340 | Msa1233640 | 0.829062 | 6.350643e-55 | -8.615850e-47 |
Msa0180210 | Msa1233640 | 0.801212 | 1.001503e-48 | -8.615850e-47 |
Msa0190670 | Msa1233640 | 0.810129 | 1.343970e-50 | -8.615850e-47 |
Msa0195580 | Msa1233640 | 0.815458 | 9.150462e-52 | -8.615850e-47 |
Msa0196260 | Msa1233640 | 0.806511 | 7.938362e-50 | -8.615850e-47 |
Msa0206370 | Msa1233640 | 0.811093 | 8.318890e-51 | -8.615850e-47 |
Msa0209060 | Msa1233640 | 0.810824 | 9.514222e-51 | -8.615850e-47 |
Msa0211460 | Msa1233640 | 0.810371 | 1.191536e-50 | -8.615850e-47 |
Msa0218060 | Msa1233640 | 0.800226 | 1.592146e-48 | -8.615850e-47 |
Msa0219210 | Msa1233640 | 0.806528 | 7.874852e-50 | -8.615850e-47 |
Msa0235080 | Msa1233640 | 0.835890 | 1.289321e-56 | -8.615850e-47 |
Msa0238110 | Msa1233640 | 0.808206 | 3.470378e-50 | -8.615850e-47 |
Msa1225850 | Msa1233640 | 0.801446 | 8.969515e-49 | -8.615850e-47 |
Msa1233630 | Msa1233640 | 0.802796 | 4.733822e-49 | -8.615850e-47 |
Msa1233640 | Msa1236680 | 0.803818 | 2.907742e-49 | -8.615850e-47 |
Msa1233640 | Msa1255710 | 0.816397 | 5.646777e-52 | -8.615850e-47 |
Msa1233640 | Msa1269050 | 0.825262 | 5.159195e-54 | -8.615850e-47 |
Msa1233640 | Msa1275860 | 0.879897 | 8.559570e-70 | -8.615850e-47 |
Msa1233640 | Msa1275870 | 0.812484 | 4.143530e-51 | -8.615850e-47 |
Msa1233640 | Msa1300610 | 0.822824 | 1.926083e-53 | -8.615850e-47 |
Msa1233640 | Msa1314040 | 0.904840 | 8.053475e-80 | -8.615850e-47 |
Msa1233640 | Msa1314050 | 0.807248 | 5.544786e-50 | -8.615850e-47 |
Msa1233640 | Msa1319030 | 0.805201 | 1.496441e-49 | -8.615850e-47 |
Msa1233640 | Msa1323120 | 0.814617 | 1.406332e-51 | -8.615850e-47 |
Msa1233640 | Msa1329740 | 0.815156 | 1.067880e-51 | -8.615850e-47 |
Msa1233640 | Msa1355340 | 0.826343 | 2.857845e-54 | -8.615850e-47 |
Msa1233640 | Msa1357840 | 0.803395 | 3.557973e-49 | -8.615850e-47 |
Msa1233640 | Msa1376070 | 0.810007 | 1.427890e-50 | -8.615850e-47 |
Msa1233640 | Msa1377520 | 0.801778 | 7.669258e-49 | -8.615850e-47 |
Msa1233640 | Msa1386120 | 0.801515 | 8.681585e-49 | -8.615850e-47 |
Msa1233640 | Msa1405830 | 0.806933 | 6.467466e-50 | -8.615850e-47 |
Msa1233640 | Msa1409600 | 0.807593 | 4.685918e-50 | -8.615850e-47 |
Msa1233640 | Msa1413020 | 0.812876 | 3.399983e-51 | -8.615850e-47 |
Msa1233640 | Msa1427670 | 0.801604 | 8.324459e-49 | -8.615850e-47 |
Msa1233640 | Msa1431160 | 0.804151 | 2.478991e-49 | -8.615850e-47 |
Msa1233640 | Msa1445900 | 0.807597 | 4.675887e-50 | -8.615850e-47 |
Msa1233640 | Msa1451660 | 0.810900 | 9.158559e-51 | -8.615850e-47 |
Msa1233640 | Msa1455360 | 0.819945 | 8.898068e-53 | -8.615850e-47 |
Msa1233640 | Msa1459610 | 0.863151 | 3.054003e-64 | -8.615850e-47 |
Msa1233640 | Msa1461660 | 0.814580 | 1.433158e-51 | -8.615850e-47 |
Msa0364910 | Msa1233640 | -0.810207 | 1.292593e-50 | -8.615850e-47 |
Msa0366510 | Msa1233640 | 0.811120 | 8.207573e-51 | -8.615850e-47 |
Msa0374040 | Msa1233640 | 0.810925 | 9.043290e-51 | -8.615850e-47 |
Msa0379480 | Msa1233640 | 0.804309 | 2.298416e-49 | -8.615850e-47 |
Msa0404140 | Msa1233640 | 0.826933 | 2.066886e-54 | -8.615850e-47 |
Msa0414480 | Msa1233640 | 0.846530 | 2.050021e-59 | -8.615850e-47 |
Msa0419420 | Msa1233640 | -0.803414 | 3.525903e-49 | -8.615850e-47 |
Msa0430320 | Msa1233640 | 0.808949 | 2.408104e-50 | -8.615850e-47 |
Msa0430460 | Msa1233640 | 0.804241 | 2.374733e-49 | -8.615850e-47 |
Msa0481670 | Msa1233640 | 0.800715 | 1.265686e-48 | -8.615850e-47 |
Msa0982560 | Msa1233640 | 0.800531 | 1.379407e-48 | -8.615850e-47 |
Msa0987640 | Msa1233640 | 0.833608 | 4.837635e-56 | -8.615850e-47 |
Msa0996980 | Msa1233640 | 0.825257 | 5.173175e-54 | -8.615850e-47 |
Msa0996990 | Msa1233640 | 0.816692 | 4.850333e-52 | -8.615850e-47 |
Msa1003110 | Msa1233640 | 0.825562 | 4.381380e-54 | -8.615850e-47 |
Msa1004720 | Msa1233640 | -0.809427 | 1.902128e-50 | -8.615850e-47 |
Msa1006170 | Msa1233640 | 0.816973 | 4.196211e-52 | -8.615850e-47 |
Msa1021620 | Msa1233640 | 0.827516 | 1.498576e-54 | -8.615850e-47 |
Msa1022490 | Msa1233640 | 0.817704 | 2.872266e-52 | -8.615850e-47 |
Msa1022510 | Msa1233640 | 0.822656 | 2.107927e-53 | -8.615850e-47 |
Msa1030320 | Msa1233640 | 0.807096 | 5.973744e-50 | -8.615850e-47 |
Msa1036020 | Msa1233640 | 0.801288 | 9.662199e-49 | -8.615850e-47 |
Msa1041910 | Msa1233640 | 0.828088 | 1.091849e-54 | -8.615850e-47 |
Msa1048390 | Msa1233640 | 0.815075 | 1.113208e-51 | -8.615850e-47 |
Msa1061670 | Msa1233640 | 0.851806 | 6.983577e-61 | -8.615850e-47 |
Msa1063210 | Msa1233640 | 0.804558 | 2.039119e-49 | -8.615850e-47 |
Msa1064940 | Msa1233640 | 0.813235 | 2.835879e-51 | -8.615850e-47 |
Msa1076830 | Msa1233640 | 0.804125 | 2.509638e-49 | -8.615850e-47 |
Msa1079820 | Msa1233640 | 0.810567 | 1.080955e-50 | -8.615850e-47 |
Msa1087380 | Msa1233640 | 0.813760 | 2.174512e-51 | -8.615850e-47 |
Msa1106680 | Msa1233640 | 0.830655 | 2.599253e-55 | -8.615850e-47 |
Msa1106960 | Msa1233640 | 0.850709 | 1.425038e-60 | -8.615850e-47 |
Msa0253450 | Msa1233640 | 0.807224 | 5.611996e-50 | -8.615850e-47 |
Msa0258010 | Msa1233640 | 0.819751 | 9.850311e-53 | -8.615850e-47 |
Msa0273360 | Msa1233640 | 0.818847 | 1.582751e-52 | -8.615850e-47 |
Msa0278460 | Msa1233640 | 0.816059 | 6.722777e-52 | -8.615850e-47 |
Msa0281190 | Msa1233640 | 0.808286 | 3.336929e-50 | -8.615850e-47 |
Msa0288540 | Msa1233640 | 0.807794 | 4.246752e-50 | -8.615850e-47 |
Msa0298270 | Msa1233640 | 0.825317 | 5.007071e-54 | -8.615850e-47 |
Msa0304060 | Msa1233640 | -0.801456 | 8.927404e-49 | -8.615850e-47 |
Msa0313620 | Msa1233640 | 0.823997 | 1.024471e-53 | -8.615850e-47 |
Msa0316000 | Msa1233640 | 0.803714 | 3.054831e-49 | -8.615850e-47 |
Msa0328090 | Msa1233640 | 0.816308 | 5.912274e-52 | -8.615850e-47 |
Msa0328870 | Msa1233640 | 0.814809 | 1.275321e-51 | -8.615850e-47 |
Msa0336070 | Msa1233640 | 0.803881 | 2.821313e-49 | -8.615850e-47 |
Msa0336460 | Msa1233640 | 0.801822 | 7.509493e-49 | -8.615850e-47 |
Msa0348370 | Msa1233640 | 0.833970 | 3.926064e-56 | -8.615850e-47 |
Msa0349930 | Msa1233640 | 0.811519 | 6.722924e-51 | -8.615850e-47 |
Msa1108560 | Msa1233640 | 0.802576 | 5.253426e-49 | -8.615850e-47 |
Msa1127200 | Msa1233640 | 0.801586 | 8.398270e-49 | -8.615850e-47 |
Msa1133860 | Msa1233640 | 0.819284 | 1.258890e-52 | -8.615850e-47 |
Msa1142600 | Msa1233640 | 0.803762 | 2.986897e-49 | -8.615850e-47 |
Msa1147010 | Msa1233640 | 0.804887 | 1.741163e-49 | -8.615850e-47 |
Msa1149020 | Msa1233640 | 0.804133 | 2.500054e-49 | -8.615850e-47 |
Msa1157210 | Msa1233640 | 0.802282 | 6.039725e-49 | -8.615850e-47 |
Msa1163340 | Msa1233640 | 0.807471 | 4.972845e-50 | -8.615850e-47 |
Msa1163670 | Msa1233640 | 0.814145 | 1.788200e-51 | -8.615850e-47 |
Msa1165460 | Msa1233640 | 0.803801 | 2.930915e-49 | -8.615850e-47 |
Msa1167960 | Msa1233640 | 0.827514 | 1.500221e-54 | -8.615850e-47 |
Msa1170340 | Msa1233640 | 0.810549 | 1.090837e-50 | -8.615850e-47 |
Msa1179170 | Msa1233640 | 0.851100 | 1.105984e-60 | -8.615850e-47 |
Msa1183870 | Msa1233640 | 0.815115 | 1.090907e-51 | -8.615850e-47 |
Msa1186340 | Msa1233640 | 0.809371 | 1.955921e-50 | -8.615850e-47 |
Msa1187750 | Msa1233640 | 0.806044 | 9.958790e-50 | -8.615850e-47 |
Msa1206030 | Msa1233640 | 0.801238 | 9.894645e-49 | -8.615850e-47 |
Msa1217890 | Msa1233640 | 0.823268 | 1.517826e-53 | -8.615850e-47 |
Msa0490060 | Msa1233640 | 0.801597 | 8.352679e-49 | -8.615850e-47 |
Msa0515150 | Msa1233640 | 0.817969 | 2.502829e-52 | -8.615850e-47 |
Msa0530990 | Msa1233640 | 0.819622 | 1.054633e-52 | -8.615850e-47 |
Msa0531030 | Msa1233640 | 0.810572 | 1.078178e-50 | -8.615850e-47 |
Msa0531080 | Msa1233640 | 0.805238 | 1.469867e-49 | -8.615850e-47 |
Msa0532660 | Msa1233640 | 0.803946 | 2.734165e-49 | -8.615850e-47 |
Msa0535570 | Msa1233640 | 0.824182 | 9.271671e-54 | -8.615850e-47 |
Msa0538520 | Msa1233640 | 0.801987 | 6.947995e-49 | -8.615850e-47 |
Msa0543740 | Msa1233640 | 0.819386 | 1.193324e-52 | -8.615850e-47 |
Msa0545680 | Msa1233640 | 0.803007 | 4.280596e-49 | -8.615850e-47 |
Msa0549170 | Msa1233640 | 0.842428 | 2.602252e-58 | -8.615850e-47 |
Msa0549960 | Msa1233640 | 0.823818 | 1.128585e-53 | -8.615850e-47 |
Msa0549970 | Msa1233640 | 0.811801 | 5.837089e-51 | -8.615850e-47 |
Msa0554660 | Msa1233640 | 0.849636 | 2.846686e-60 | -8.615850e-47 |
Msa0556720 | Msa1233640 | 0.800009 | 1.762166e-48 | -8.615850e-47 |
Msa0587730 | Msa1233640 | 0.808430 | 3.109859e-50 | -8.615850e-47 |
Msa0587870 | Msa1233640 | 0.803387 | 3.572310e-49 | -8.615850e-47 |
Msa0587920 | Msa1233640 | 0.805245 | 1.464863e-49 | -8.615850e-47 |
Msa0589460 | Msa1233640 | 0.813744 | 2.191802e-51 | -8.615850e-47 |
Msa0591490 | Msa1233640 | 0.834101 | 3.641451e-56 | -8.615850e-47 |
Msa0602050 | Msa1233640 | 0.815447 | 9.200284e-52 | -8.615850e-47 |
Msa0863840 | Msa1233640 | 0.809481 | 1.852760e-50 | -8.615850e-47 |
Msa0869660 | Msa1233640 | 0.809737 | 1.631734e-50 | -8.615850e-47 |
Msa0880910 | Msa1233640 | 0.830819 | 2.368631e-55 | -8.615850e-47 |
Msa0893840 | Msa1233640 | 0.825723 | 4.011405e-54 | -8.615850e-47 |
Msa0896910 | Msa1233640 | 0.804495 | 2.101753e-49 | -8.615850e-47 |
Msa0896920 | Msa1233640 | 0.844744 | 6.253594e-59 | -8.615850e-47 |
Msa0896950 | Msa1233640 | 0.822958 | 1.792557e-53 | -8.615850e-47 |
Msa0898830 | Msa1233640 | -0.804549 | 2.047861e-49 | -8.615850e-47 |
Msa0910830 | Msa1233640 | 0.806329 | 8.674723e-50 | -8.615850e-47 |
Msa0913550 | Msa1233640 | 0.832978 | 6.943172e-56 | -8.615850e-47 |
Msa0951150 | Msa1233640 | 0.832614 | 8.550426e-56 | -8.615850e-47 |
Msa0962290 | Msa1233640 | 0.816142 | 6.440066e-52 | -8.615850e-47 |
Msa0967780 | Msa1233640 | 0.813781 | 2.151297e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1233640 | MtrunA17_Chr8g0342981 | 94.545 | 825 | 41 | 4 | 1 | 823 | 1 | 823 | 0.0 | 1597 |
Msa1233640 | MtrunA17_Chr8g0342971 | 67.643 | 819 | 218 | 13 | 38 | 823 | 66 | 870 | 0.0 | 1102 |
Msa1233640 | MtrunA17_Chr8g0344211 | 66.626 | 821 | 229 | 9 | 34 | 823 | 62 | 868 | 0.0 | 1090 |
Msa1233640 | MtrunA17_Chr8g0343011 | 66.052 | 813 | 236 | 10 | 37 | 823 | 67 | 865 | 0.0 | 1085 |
Msa1233640 | MtrunA17_Chr8g0342891 | 64.555 | 821 | 246 | 10 | 34 | 823 | 55 | 861 | 0.0 | 1070 |
Msa1233640 | MtrunA17_Chr8g0342951 | 66.382 | 821 | 231 | 11 | 34 | 823 | 62 | 868 | 0.0 | 1063 |
Msa1233640 | MtrunA17_Chr8g0342921 | 63.980 | 819 | 248 | 13 | 37 | 823 | 66 | 869 | 0.0 | 1043 |
Msa1233640 | MtrunA17_Chr8g0342931 | 66.095 | 758 | 219 | 7 | 93 | 823 | 4 | 750 | 0.0 | 1010 |
Msa1233640 | MtrunA17_Chr8g0342901 | 63.033 | 798 | 265 | 10 | 32 | 823 | 55 | 828 | 0.0 | 1009 |
Msa1233640 | MtrunA17_Chr8g0342991 | 60.757 | 846 | 270 | 13 | 1 | 823 | 1 | 807 | 0.0 | 991 |
Msa1233640 | MtrunA17_Chr8g0343001 | 58.343 | 857 | 273 | 14 | 1 | 823 | 1 | 807 | 0.0 | 952 |
Msa1233640 | MtrunA17_Chr8g0342881 | 58.100 | 821 | 299 | 10 | 34 | 823 | 50 | 856 | 0.0 | 951 |
Msa1233640 | MtrunA17_Chr2g0329911 | 58.852 | 819 | 290 | 12 | 37 | 823 | 58 | 861 | 0.0 | 944 |
Msa1233640 | MtrunA17_Chr2g0329901 | 56.479 | 818 | 308 | 12 | 37 | 823 | 63 | 863 | 0.0 | 896 |
Msa1233640 | MtrunA17_Chr5g0406871 | 55.976 | 820 | 311 | 14 | 37 | 823 | 65 | 867 | 0.0 | 886 |
Msa1233640 | MtrunA17_Chr8g0343031 | 55.556 | 819 | 315 | 14 | 37 | 823 | 64 | 865 | 0.0 | 878 |
Msa1233640 | MtrunA17_Chr8g0343021 | 54.579 | 819 | 323 | 13 | 37 | 823 | 63 | 864 | 0.0 | 867 |
Msa1233640 | MtrunA17_Chr3g0120071 | 54.212 | 819 | 332 | 12 | 34 | 823 | 54 | 858 | 0.0 | 864 |
Msa1233640 | MtrunA17_Chr7g0272791 | 51.217 | 863 | 358 | 18 | 10 | 823 | 19 | 867 | 0.0 | 826 |
Msa1233640 | MtrunA17_Chr1g0191921 | 53.455 | 825 | 331 | 15 | 37 | 823 | 49 | 858 | 0.0 | 823 |
Msa1233640 | MtrunA17_Chr1g0205611 | 51.023 | 831 | 350 | 16 | 37 | 823 | 39 | 856 | 0.0 | 806 |
Msa1233640 | MtrunA17_Chr8g0344201 | 44.037 | 763 | 381 | 11 | 93 | 822 | 177 | 926 | 0.0 | 635 |
Msa1233640 | MtrunA17_Chr8g0344241 | 72.864 | 398 | 104 | 2 | 427 | 823 | 67 | 461 | 0.0 | 595 |
Msa1233640 | MtrunA17_Chr3g0118651 | 42.583 | 782 | 405 | 15 | 72 | 823 | 136 | 903 | 0.0 | 591 |
Msa1233640 | MtrunA17_Chr8g0377101 | 40.361 | 830 | 429 | 17 | 37 | 823 | 110 | 916 | 0.0 | 575 |
Msa1233640 | MtrunA17_Chr3g0118641 | 42.366 | 786 | 401 | 15 | 72 | 823 | 135 | 902 | 0.0 | 573 |
Msa1233640 | MtrunA17_Chr8g0338451 | 38.526 | 841 | 442 | 19 | 18 | 809 | 42 | 856 | 0.0 | 564 |
Msa1233640 | MtrunA17_Chr4g0047281 | 40.346 | 751 | 402 | 14 | 93 | 822 | 169 | 894 | 0.0 | 557 |
Msa1233640 | MtrunA17_Chr4g0033171 | 42.382 | 722 | 359 | 13 | 139 | 823 | 24 | 725 | 0.0 | 545 |
Msa1233640 | MtrunA17_Chr3g0118621 | 42.670 | 764 | 390 | 15 | 94 | 823 | 116 | 865 | 4.50e-178 | 534 |
Msa1233640 | MtrunA17_Chr6g0471951 | 38.819 | 474 | 243 | 7 | 310 | 778 | 43 | 474 | 6.11e-109 | 342 |
Msa1233640 | MtrunA17_Chr7g0218231 | 61.207 | 116 | 44 | 1 | 479 | 593 | 17 | 132 | 3.18e-41 | 147 |
Msa1233640 | MtrunA17_Chr6g0468081 | 56.180 | 89 | 38 | 1 | 506 | 593 | 1 | 89 | 1.41e-25 | 101 |
Msa1233640 | MtrunA17_Chr4g0047271 | 41.758 | 91 | 53 | 0 | 732 | 822 | 1 | 91 | 1.42e-17 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1233640 | AT1G55020.1 | 51.879 | 825 | 343 | 17 | 37 | 823 | 51 | 859 | 0.0 | 805 |
Msa1233640 | AT3G22400.1 | 48.968 | 872 | 376 | 19 | 9 | 823 | 27 | 886 | 0.0 | 801 |
Msa1233640 | AT1G17420.1 | 44.823 | 763 | 376 | 12 | 92 | 823 | 171 | 919 | 0.0 | 637 |
Msa1233640 | AT1G72520.1 | 43.194 | 764 | 388 | 11 | 92 | 823 | 177 | 926 | 0.0 | 627 |
Msa1233640 | AT3G45140.1 | 40.898 | 846 | 426 | 23 | 17 | 823 | 86 | 896 | 0.0 | 574 |
Msa1233640 | AT3G45140.2 | 42.523 | 769 | 380 | 19 | 94 | 823 | 9 | 754 | 0.0 | 570 |
Msa1233640 | AT1G67560.1 | 39.854 | 823 | 442 | 17 | 37 | 823 | 112 | 917 | 0.0 | 554 |
Find 191 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCACTGATTTAGCATTAAT+TGG | 0.113920 | 8_2:+10496611 | None:intergenic |
CTTCATGCAGCTGTTAATTT+TGG | 0.155837 | 8_2:-10494740 | Msa1233640:CDS |
TCATCTTTAACATCTTTATT+TGG | 0.164702 | 8_2:+10495792 | None:intergenic |
ACGTAATATTGAATTGAAAT+TGG | 0.167485 | 8_2:+10497543 | None:intergenic |
ATTTCGTGATCGTGCATTTA+TGG | 0.174964 | 8_2:+10495485 | None:intergenic |
GACTTGGGTCGTCCAGTTCT+TGG | 0.187573 | 8_2:-10497073 | Msa1233640:CDS |
CATCTTTAACATCTTTATTT+GGG | 0.193179 | 8_2:+10495793 | None:intergenic |
CTATCTAACTTGCTCTTTCT+TGG | 0.212968 | 8_2:+10496207 | None:intergenic |
GCATTTACTTTCCTCAAATA+TGG | 0.213554 | 8_2:+10495954 | None:intergenic |
CCCTTCCGACTCTCAGTCTT+TGG | 0.218642 | 8_2:+10496803 | None:intergenic |
AGTGGGAGAGCGAACATATT+TGG | 0.226436 | 8_2:-10497591 | Msa1233640:CDS |
GAAAGGATCCCATGAGTTTA+AGG | 0.229876 | 8_2:-10494654 | Msa1233640:CDS |
AAGATGACGAACCTTTAATT+TGG | 0.260253 | 8_2:-10495776 | Msa1233640:CDS |
ATGAGGAACTCAGAGCATTT+TGG | 0.263372 | 8_2:-10494877 | Msa1233640:CDS |
GGACTACATGAAGACATATT+TGG | 0.266844 | 8_2:-10494621 | Msa1233640:CDS |
GAATGCTAAGTGGGTTAAAA+TGG | 0.267598 | 8_2:-10494819 | Msa1233640:CDS |
ACCCTTGATGTTCCAAATCT+TGG | 0.280311 | 8_2:-10497428 | Msa1233640:CDS |
TTTCTCTGGCATGAATCTTA+TGG | 0.281030 | 8_2:+10494673 | None:intergenic |
TGTCCAAGGTATTCCTCATT+AGG | 0.283725 | 8_2:+10494530 | None:intergenic |
ACTTGGGTCGTCCAGTTCTT+GGG | 0.289714 | 8_2:-10497072 | Msa1233640:CDS |
GTTTGGCTCCAAGTGTTCTT+TGG | 0.296808 | 8_2:+10496152 | None:intergenic |
CCTGCAATCACTTGTGGTAT+TGG | 0.318367 | 8_2:+10496572 | None:intergenic |
TTTGCAAGGAGCCAAATTAA+AGG | 0.323385 | 8_2:+10495765 | None:intergenic |
CATCCTAATGGTGATAGTTT+TGG | 0.332322 | 8_2:-10495840 | Msa1233640:CDS |
CGTAATATTGAATTGAAATT+GGG | 0.336297 | 8_2:+10497544 | None:intergenic |
TTGTAGGCTTCTACTGGCTC+TGG | 0.340356 | 8_2:+10494476 | None:intergenic |
AAGTTGATGGTTCCAAGATT+TGG | 0.344231 | 8_2:+10497416 | None:intergenic |
CCACTGATTTAGCATTAATT+GGG | 0.359882 | 8_2:+10496612 | None:intergenic |
CAGCTGTTGTTTACAAGGAT+TGG | 0.361308 | 8_2:-10495395 | Msa1233640:CDS |
ACTGTGACCCCATCCATGTT+TGG | 0.364475 | 8_2:+10496135 | None:intergenic |
ACTTCAAGGGTTTCAACCTT+TGG | 0.366918 | 8_2:+10494587 | None:intergenic |
GTAGCCTTACCTTTCTTACT+TGG | 0.369109 | 8_2:+10496986 | None:intergenic |
CTGTTGATGGACTAGAGATA+TGG | 0.369958 | 8_2:-10494970 | Msa1233640:CDS |
AATTCAATATTACGTTTGAA+TGG | 0.370219 | 8_2:-10497535 | Msa1233640:CDS |
CTACGATGTCTACAATGATT+TGG | 0.375479 | 8_2:-10497116 | Msa1233640:CDS |
GAAGAGTTGAAGACTTTAAG+AGG | 0.376977 | 8_2:-10497181 | Msa1233640:CDS |
AAAGAACTGAAGGTGATCTT+TGG | 0.382740 | 8_2:-10494508 | Msa1233640:CDS |
GAGCTGGTGTTTCACTTAGA+AGG | 0.387861 | 8_2:+10497224 | None:intergenic |
CAACAAGGTCACAAAGCTTA+AGG | 0.388273 | 8_2:-10502060 | Msa1233640:CDS |
CATTCGTCATAGCAACAAAT+AGG | 0.394550 | 8_2:-10495569 | Msa1233640:CDS |
ACTCTTGCACTACCCTCATA+TGG | 0.396428 | 8_2:-10494775 | Msa1233640:CDS |
AACTCATGGGATCCTTTCTC+TGG | 0.406308 | 8_2:+10494659 | None:intergenic |
CCCAAGTCAGCCTCTTTGTC+TGG | 0.409139 | 8_2:+10497088 | None:intergenic |
TGAGTTGCAGATAAAGTTGA+TGG | 0.410883 | 8_2:+10497403 | None:intergenic |
GTGTTCTTTGGTTATTGTGC+TGG | 0.414888 | 8_2:+10496164 | None:intergenic |
AAAGAAATTGATTGAAATTG+AGG | 0.415217 | 8_2:-10494444 | Msa1233640:CDS |
GGAACTAAAAGTTTATGAAT+TGG | 0.415574 | 8_2:+10495528 | None:intergenic |
CTTTATCCTTCCAGTGGACC+AGG | 0.416744 | 8_2:-10494347 | Msa1233640:CDS |
AGCATCAAAGATGACTTCAT+TGG | 0.418451 | 8_2:-10502102 | None:intergenic |
AGCTGTTGTTTACAAGGATT+GGG | 0.419463 | 8_2:-10495394 | Msa1233640:CDS |
GTGGGAGAGCGAACATATTT+GGG | 0.423494 | 8_2:-10497590 | Msa1233640:CDS |
GGCAAGTAAACATTACTAAC+AGG | 0.430747 | 8_2:+10495816 | None:intergenic |
TCTTGTCTATAGTAGACTAA+TGG | 0.431200 | 8_2:+10497202 | None:intergenic |
TCTAGTCCATCAACAGCATA+TGG | 0.431259 | 8_2:+10494977 | None:intergenic |
GAAGGATAAAGAAGAGTGTA+TGG | 0.437895 | 8_2:+10494359 | None:intergenic |
TGCTGCTGATCCTTCCATCC+CGG | 0.439402 | 8_2:-10502006 | Msa1233640:CDS |
AGGAAATGGAAAAGGAAAAG+TGG | 0.439449 | 8_2:-10497609 | Msa1233640:CDS |
GAACTAAAAGTTTATGAATT+GGG | 0.442063 | 8_2:+10495529 | None:intergenic |
AATGTCAGCTGTTGTTTACA+AGG | 0.448150 | 8_2:-10495400 | Msa1233640:CDS |
GCCAGACAAAGAGGCTGACT+TGG | 0.449309 | 8_2:-10497089 | Msa1233640:CDS |
TACGATGTCTACAATGATTT+GGG | 0.450405 | 8_2:-10497115 | Msa1233640:CDS |
ATTCAATATTACGTTTGAAT+GGG | 0.452062 | 8_2:-10497534 | Msa1233640:CDS |
GGACCAAAACTATCACCATT+AGG | 0.454709 | 8_2:+10495837 | None:intergenic |
CCAATACCACAAGTGATTGC+AGG | 0.459078 | 8_2:-10496572 | Msa1233640:intron |
AACAAGGTCACAAAGCTTAA+GGG | 0.460236 | 8_2:-10502059 | Msa1233640:CDS |
AAGTTAGATAGTAAACTCTA+TGG | 0.460764 | 8_2:-10496195 | Msa1233640:CDS |
GGATGGAACTTTGAATCCAT+TGG | 0.462431 | 8_2:-10495883 | Msa1233640:CDS |
GATTATCCATATGCTGTTGA+TGG | 0.465219 | 8_2:-10494983 | Msa1233640:CDS |
GATCTTACCCTTCGAGGGTA+AGG | 0.465611 | 8_2:+10497019 | None:intergenic |
GTGTGAAGTAATTCATCTCT+TGG | 0.466557 | 8_2:+10496767 | None:intergenic |
TTGAAGACTTTAAGAGGAGA+TGG | 0.467418 | 8_2:-10497175 | Msa1233640:CDS |
GCTGCTGATCCTTCCATCCC+GGG | 0.468082 | 8_2:-10502005 | Msa1233640:CDS |
CTCACCAATGGCTGACAAGT+TGG | 0.472627 | 8_2:+10495709 | None:intergenic |
CACCTTCAGTTCTTTGTCCA+AGG | 0.475536 | 8_2:+10494516 | None:intergenic |
CACAATAACCAAAGAACACT+TGG | 0.476943 | 8_2:-10496160 | Msa1233640:CDS |
ATGCAATCTATCCATATTTG+AGG | 0.477015 | 8_2:-10495965 | Msa1233640:CDS |
CTAAGTTTGCCACATCCTAA+TGG | 0.478321 | 8_2:-10495852 | Msa1233640:CDS |
GTGCTGAAGCAATCCATATG+AGG | 0.478585 | 8_2:+10494762 | None:intergenic |
CTTGGGTCGTCCAGTTCTTG+GGG | 0.478606 | 8_2:-10497071 | Msa1233640:CDS |
CATAGTATTCATAACTTCAA+GGG | 0.479502 | 8_2:+10494574 | None:intergenic |
ATCCCTCTACCGGTCAATCC+TGG | 0.481528 | 8_2:+10494329 | None:intergenic |
ACCGGTCAATCCTGGTCCAC+TGG | 0.482600 | 8_2:+10494337 | None:intergenic |
TGAATGGGACACTGAAAAGA+TGG | 0.486422 | 8_2:-10497519 | Msa1233640:CDS |
TTTGCAAGACAGATGATTGC+TGG | 0.490818 | 8_2:-10496391 | Msa1233640:CDS |
CAGAAGACGCAGACCATGTA+GGG | 0.495190 | 8_2:+10495012 | None:intergenic |
ACTTGATCAATTAGTGCAGC+TGG | 0.495729 | 8_2:+10494201 | None:intergenic |
TAGCGAGCTCCTTAAACTCA+TGG | 0.496735 | 8_2:+10494645 | None:intergenic |
AACGGGTGAGCGCAAAGAAT+GGG | 0.497372 | 8_2:-10497152 | Msa1233640:CDS |
AAGATGGGAGCTCCATCCCC+AGG | 0.498433 | 8_2:-10497503 | Msa1233640:CDS |
GACGATGATTCTTCCCTACA+TGG | 0.498532 | 8_2:-10495025 | Msa1233640:CDS |
GGACCAGGATTGACCGGTAG+AGG | 0.499249 | 8_2:-10494332 | Msa1233640:CDS |
TGGTCTGCGTCTTCTGATAG+AGG | 0.500498 | 8_2:-10495005 | Msa1233640:CDS |
CTACCAGATCTTACCCTTCG+AGG | 0.502272 | 8_2:+10497013 | None:intergenic |
CACTTGGAGCCAAACATGGA+TGG | 0.506365 | 8_2:-10496144 | Msa1233640:CDS |
TTTAATTTGGCTCCTTGCAA+AGG | 0.507483 | 8_2:-10495763 | Msa1233640:CDS |
TGAAGTTATGAATACTATGC+TGG | 0.513367 | 8_2:-10494570 | Msa1233640:CDS |
ATCTTTAACATCTTTATTTG+GGG | 0.514164 | 8_2:+10495794 | None:intergenic |
GCATAGTATTCATAACTTCA+AGG | 0.518741 | 8_2:+10494573 | None:intergenic |
GAACGGGTGAGCGCAAAGAA+TGG | 0.519285 | 8_2:-10497153 | Msa1233640:CDS |
GGTAGAGAACCAAGTAAGAA+AGG | 0.522835 | 8_2:-10496995 | Msa1233640:intron |
TCAACTTTATCTGCAACTCA+TGG | 0.523897 | 8_2:-10497400 | Msa1233640:CDS |
AAGAATGGTTCTAGCAGCAT+AGG | 0.523930 | 8_2:+10495917 | None:intergenic |
ATAAGATTCATGCCAGAGAA+AGG | 0.523973 | 8_2:-10494671 | Msa1233640:CDS |
TTGGAAAGAACTTGTAGAAG+TGG | 0.524808 | 8_2:-10494858 | Msa1233640:CDS |
TTCCATCCCGGGTCGTTCTG+TGG | 0.526330 | 8_2:-10501994 | Msa1233640:CDS |
CAGATTGATTAGTGATTCCA+CGG | 0.526943 | 8_2:-10501967 | Msa1233640:CDS |
TGGAAAGAACTTGTAGAAGT+GGG | 0.530595 | 8_2:-10494857 | Msa1233640:CDS |
TCCAGTGGACCAGGATTGAC+CGG | 0.531569 | 8_2:-10494338 | Msa1233640:CDS |
GACTTTAAGAGGAGATGGAA+CGG | 0.533638 | 8_2:-10497170 | Msa1233640:CDS |
TTTGGGAAGTCTTATTACCT+CGG | 0.534922 | 8_2:-10497573 | Msa1233640:CDS |
TTCCAAGATTTGGAACATCA+AGG | 0.534980 | 8_2:+10497426 | None:intergenic |
TTGAAATTGGGTTTCATCCG+AGG | 0.535165 | 8_2:+10497556 | None:intergenic |
CCCAATTAATGCTAAATCAG+TGG | 0.536006 | 8_2:-10496612 | Msa1233640:CDS |
TACCCTCGAAGGGTAAGATC+TGG | 0.536332 | 8_2:-10497016 | Msa1233640:CDS |
ACTTTAAGAGGAGATGGAAC+GGG | 0.538118 | 8_2:-10497169 | Msa1233640:CDS |
ATTAGTGATTCCACGGCTGA+TGG | 0.539092 | 8_2:-10501960 | Msa1233640:intron |
GGAAATGGAAAAGGAAAAGT+GGG | 0.542323 | 8_2:-10497608 | Msa1233640:CDS |
CTATTTGTTGCTATGACGAA+TGG | 0.543162 | 8_2:+10495570 | None:intergenic |
GATTGGGTATTCGCTGAAGA+AGG | 0.543264 | 8_2:-10495378 | Msa1233640:CDS |
TGTTGATGGACTAGAGATAT+GGG | 0.545247 | 8_2:-10494969 | Msa1233640:CDS |
ACTTGGAGCCAAACATGGAT+GGG | 0.545456 | 8_2:-10496143 | Msa1233640:CDS |
CAACAGCATATGCCTTTGCA+AGG | 0.546438 | 8_2:+10495751 | None:intergenic |
ATTTGTGTAGGAAATGGAAA+AGG | 0.547881 | 8_2:-10497617 | Msa1233640:intron |
GTCACCAACTTGTCAGCCAT+TGG | 0.552121 | 8_2:-10495713 | Msa1233640:intron |
TATGGGCTGCTATTAAGTCA+TGG | 0.554200 | 8_2:-10494952 | Msa1233640:CDS |
ATTAATTGGGGAAAGTTCGT+TGG | 0.554684 | 8_2:+10496625 | None:intergenic |
TTGCTTATTATCTAGAGGAG+TGG | 0.555634 | 8_2:-10495053 | Msa1233640:intron |
AGCCACAGAACGACCCGGGA+TGG | 0.555840 | 8_2:+10501992 | None:intergenic |
CTATAGTAGACTAATGGAGC+TGG | 0.556484 | 8_2:+10497208 | None:intergenic |
ATGTGGCAAACTTAGCTCAA+TGG | 0.559945 | 8_2:+10495860 | None:intergenic |
CTGAAAGCCACAGAACGACC+CGG | 0.560077 | 8_2:+10501987 | None:intergenic |
AGCGAGCTCCTTAAACTCAT+GGG | 0.561213 | 8_2:+10494646 | None:intergenic |
AGAACACTTGGAGCCAAACA+TGG | 0.561811 | 8_2:-10496148 | Msa1233640:CDS |
TTGAGGAAGAGTTCATTCAA+AGG | 0.562917 | 8_2:-10494427 | Msa1233640:CDS |
GATCCTAATGAGGAATACCT+TGG | 0.563947 | 8_2:-10494533 | Msa1233640:CDS |
ATGGGCTGCTATTAAGTCAT+GGG | 0.567374 | 8_2:-10494951 | Msa1233640:CDS |
GGATGGGGTCACAGTAAAAG+AGG | 0.568212 | 8_2:-10496127 | Msa1233640:intron |
GTGAGCGCAAAGAATGGGAT+AGG | 0.571677 | 8_2:-10497147 | Msa1233640:CDS |
TCCAAGATTTGGAACATCAA+GGG | 0.571677 | 8_2:+10497427 | None:intergenic |
TAAAGATGTTAAAGATGATG+AGG | 0.573052 | 8_2:-10494894 | Msa1233640:CDS |
AGAGTGTATGGAAACTTCAC+AGG | 0.573626 | 8_2:+10494371 | None:intergenic |
GAGTGACAACACATCTTGAA+AGG | 0.575030 | 8_2:+10496709 | None:intergenic |
GAAACTTCACAGGCCCATAC+CGG | 0.575716 | 8_2:+10494381 | None:intergenic |
TACTTAGTATATCAGTATCA+CGG | 0.578520 | 8_2:+10496669 | None:intergenic |
GTCATCGTGCCACGATAGTG+TGG | 0.579536 | 8_2:+10495507 | None:intergenic |
CACTGATTTAGCATTAATTG+GGG | 0.580014 | 8_2:+10496613 | None:intergenic |
ACTCTTCTTTATCCTTCCAG+TGG | 0.580368 | 8_2:-10494353 | Msa1233640:CDS |
ATCCATGCATGATCCTAATG+AGG | 0.583398 | 8_2:-10494543 | Msa1233640:CDS |
TTCCTCATTAGGATCATGCA+TGG | 0.584765 | 8_2:+10494541 | None:intergenic |
CCAAAGACTGAGAGTCGGAA+GGG | 0.589023 | 8_2:-10496803 | Msa1233640:CDS |
TACCAGATCTTACCCTTCGA+GGG | 0.590224 | 8_2:+10497014 | None:intergenic |
AGAGGATTATCATGCATGGA+TGG | 0.591887 | 8_2:-10496425 | Msa1233640:CDS |
TCTTTAACATCTTTATTTGG+GGG | 0.594301 | 8_2:+10495795 | None:intergenic |
GTCAATCCTGGTCCACTGGA+AGG | 0.594966 | 8_2:+10494341 | None:intergenic |
TACCTTGGACAAAGAACTGA+AGG | 0.595384 | 8_2:-10494518 | Msa1233640:CDS |
TGAGTTTAAGGAGCTCGCTA+AGG | 0.596693 | 8_2:-10494642 | Msa1233640:CDS |
CCAGACAAAGAGGCTGACTT+GGG | 0.599209 | 8_2:-10497088 | Msa1233640:CDS |
GAATGGGACACTGAAAAGAT+GGG | 0.599538 | 8_2:-10497518 | Msa1233640:CDS |
GACCAGGATTGACCGGTAGA+GGG | 0.605995 | 8_2:-10494331 | Msa1233640:CDS |
TATATACCTGCAATCACTTG+TGG | 0.606191 | 8_2:+10496566 | None:intergenic |
GAAGTTATTACCATCAGCCG+TGG | 0.608159 | 8_2:+10501950 | None:intergenic |
TTGGGTCGTCCAGTTCTTGG+GGG | 0.609093 | 8_2:-10497070 | Msa1233640:CDS |
TCCAAAGACTGAGAGTCGGA+AGG | 0.609862 | 8_2:-10496804 | Msa1233640:CDS |
TTGGACAATATCAGTACGGA+GGG | 0.615349 | 8_2:-10494721 | Msa1233640:CDS |
GAGTAGAGGATTATCATGCA+TGG | 0.615496 | 8_2:-10496429 | Msa1233640:intron |
AAACTATCACCATTAGGATG+TGG | 0.615628 | 8_2:+10495843 | None:intergenic |
TCAGAAGACGCAGACCATGT+AGG | 0.618358 | 8_2:+10495011 | None:intergenic |
AGATGGGAGCTCCATCCCCA+GGG | 0.620003 | 8_2:-10497502 | Msa1233640:CDS |
ACTATTGGGAATCCCTCTAC+CGG | 0.620513 | 8_2:+10494319 | None:intergenic |
TGCTGAAGCAATCCATATGA+GGG | 0.621259 | 8_2:+10494763 | None:intergenic |
TCATGCATGGATGGCTGATG+AGG | 0.623591 | 8_2:-10496416 | Msa1233640:CDS |
AAATATCTTGATCAATGCAG+AGG | 0.628743 | 8_2:-10495466 | Msa1233640:CDS |
GAACTTGTAGAAGTGGGTCA+TGG | 0.630532 | 8_2:-10494851 | Msa1233640:CDS |
TGAAAGCCACAGAACGACCC+GGG | 0.630611 | 8_2:+10501988 | None:intergenic |
TTTGGAGACAATCACACCAA+AGG | 0.631480 | 8_2:-10494603 | Msa1233640:CDS |
CATCAAGGGTCAAACTCACA+AGG | 0.634650 | 8_2:+10497441 | None:intergenic |
AAACTTAGCTCAATGGCCAA+TGG | 0.637050 | 8_2:+10495867 | None:intergenic |
AATATCTTGATCAATGCAGA+GGG | 0.638662 | 8_2:-10495465 | Msa1233640:CDS |
TTTGGGTGAGCCAGACAAAG+AGG | 0.639737 | 8_2:-10497098 | Msa1233640:CDS |
GCTTTGAATAAAAGATGAGA+AGG | 0.643318 | 8_2:-10494255 | Msa1233640:three_prime_UTR |
AACAAACAACACAACAACCA+TGG | 0.650735 | 8_2:+10494278 | None:intergenic |
CTTGGAGCCAAACATGGATG+GGG | 0.651235 | 8_2:-10496142 | Msa1233640:CDS |
GCGCATCTTCTTTACCAACA+AGG | 0.651998 | 8_2:-10497348 | Msa1233640:intron |
CAGATCCAAAGACTGAGAGT+CGG | 0.656130 | 8_2:-10496808 | Msa1233640:CDS |
TGACTTGAAGAATGCTAAGT+GGG | 0.656610 | 8_2:-10494828 | Msa1233640:CDS |
TTTGGACAATATCAGTACGG+AGG | 0.658574 | 8_2:-10494722 | Msa1233640:CDS |
GTGACTTGAAGAATGCTAAG+TGG | 0.679804 | 8_2:-10494829 | Msa1233640:CDS |
AGTGTTAGCTAAGAACAACA+AGG | 0.729550 | 8_2:-10502075 | Msa1233640:CDS |
GATGGGAGCTCCATCCCCAG+GGG | 0.731834 | 8_2:-10497501 | Msa1233640:CDS |
GTAAATTCAACAAAACATCG+AGG | 0.749212 | 8_2:-10496649 | Msa1233640:CDS |
AATATGGATAGATTGCATCG+TGG | 0.790344 | 8_2:+10495970 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAAATTAGTCATTTTTTT+AGG | - | chr8_2:10494715-10494734 | Msa1233640:CDS | 10.0% |
!! | TAATAAGAATAGTTTAAAAA+AGG | + | chr8_2:10494945-10494964 | None:intergenic | 10.0% |
!! | TTTAAACTATTCTTATTAAA+AGG | - | chr8_2:10494947-10494966 | Msa1233640:CDS | 10.0% |
!! | TTAAACTATTCTTATTAAAA+GGG | - | chr8_2:10494948-10494967 | Msa1233640:CDS | 10.0% |
!! | AAAAAATTTAGTTATTTGAT+TGG | - | chr8_2:10495053-10495072 | Msa1233640:intron | 10.0% |
!!! | AATTGAGTATAATTTAATTT+AGG | - | chr8_2:10495456-10495475 | Msa1233640:CDS | 10.0% |
!! | AGTACATATTTAATTATTAA+GGG | + | chr8_2:10495899-10495918 | None:intergenic | 10.0% |
!! | TAGTACATATTTAATTATTA+AGG | + | chr8_2:10495900-10495919 | None:intergenic | 10.0% |
!!! | ATGAATTTATTTTTCTTAAA+TGG | + | chr8_2:10495982-10496001 | None:intergenic | 10.0% |
!! | CTTTATAATTTAAATATCAA+TGG | - | chr8_2:10496004-10496023 | Msa1233640:CDS | 10.0% |
!!! | TTGTTTCATATTTTATAATA+GGG | - | chr8_2:10496137-10496156 | Msa1233640:CDS | 10.0% |
!!! | AAATAAAATAAAAAAGTACT+GGG | + | chr8_2:10496245-10496264 | None:intergenic | 10.0% |
!!! | TAAATAAAATAAAAAAGTAC+TGG | + | chr8_2:10496246-10496265 | None:intergenic | 10.0% |
!!! | CTCTTTTATTAATTATATTA+AGG | - | chr8_2:10496501-10496520 | Msa1233640:intron | 10.0% |
!! | TTAATAAAAAAATGAGAAAA+AGG | - | chr8_2:10498168-10498187 | Msa1233640:intron | 10.0% |
!!! | CTATAAAAAAAATCAATTTT+AGG | + | chr8_2:10498339-10498358 | None:intergenic | 10.0% |
!! | AATAATCTTATAATTATGGA+CGG | + | chr8_2:10494348-10494367 | None:intergenic | 15.0% |
!!! | AAAAATGACTAATTTTAAGT+GGG | + | chr8_2:10494713-10494732 | None:intergenic | 15.0% |
!!! | AAAAAATGACTAATTTTAAG+TGG | + | chr8_2:10494714-10494733 | None:intergenic | 15.0% |
!!! | TATCTTTAAATGAATAGTTT+TGG | - | chr8_2:10495233-10495252 | Msa1233640:intron | 15.0% |
!!! | ATATTCACAAATTTTAGATA+GGG | + | chr8_2:10495499-10495518 | None:intergenic | 15.0% |
!! | AAAAGTTAATCTTAATCATA+AGG | - | chr8_2:10495703-10495722 | Msa1233640:intron | 15.0% |
!!! | GTGTAGATTTTATTTTTAAA+GGG | + | chr8_2:10495840-10495859 | None:intergenic | 15.0% |
!!! | AGTGTAGATTTTATTTTTAA+AGG | + | chr8_2:10495841-10495860 | None:intergenic | 15.0% |
!!! | AATTTATTTTTCTTAAATGG+TGG | + | chr8_2:10495979-10495998 | None:intergenic | 15.0% |
!! | TTACTAAATACAGTAAAATA+TGG | + | chr8_2:10496095-10496114 | None:intergenic | 15.0% |
!!! | GTTGTTTCATATTTTATAAT+AGG | - | chr8_2:10496136-10496155 | Msa1233640:CDS | 15.0% |
!!! | AATAAAATAAAAAAGTACTG+GGG | + | chr8_2:10496244-10496263 | None:intergenic | 15.0% |
!!! | AATGTATATTTTAACATAAG+AGG | - | chr8_2:10496429-10496448 | Msa1233640:intron | 15.0% |
!!! | ATGTATATTTTAACATAAGA+GGG | - | chr8_2:10496430-10496449 | Msa1233640:intron | 15.0% |
!! | GTTACAAAAAAATAAGATAA+AGG | + | chr8_2:10497389-10497408 | None:intergenic | 15.0% |
!!! | CTTATTTTTTTGTAACAATT+TGG | - | chr8_2:10497393-10497412 | Msa1233640:CDS | 15.0% |
!!! | AAAATAAATCTCTTTTCTAT+AGG | - | chr8_2:10497930-10497949 | Msa1233640:intron | 15.0% |
!!! | AAATAAATCTCTTTTCTATA+GGG | - | chr8_2:10497931-10497950 | Msa1233640:intron | 15.0% |
!! | TAACATTAATTCATGATATT+TGG | - | chr8_2:10497993-10498012 | Msa1233640:intron | 15.0% |
!! | GTTACAAATAAATAAGATAA+AGG | - | chr8_2:10498258-10498277 | Msa1233640:intron | 15.0% |
!! | AATCAAAATGTAATATACAT+TGG | + | chr8_2:10498399-10498418 | None:intergenic | 15.0% |
!!! | AATGTATATTACATTTTGAT+TGG | - | chr8_2:10498398-10498417 | Msa1233640:intron | 15.0% |
!! | ATTTAAATTAGTAGTATATC+TGG | - | chr8_2:10498580-10498599 | Msa1233640:intron | 15.0% |
!!! | TAAATTTTATTTTGTCTAAC+AGG | - | chr8_2:10500218-10500237 | Msa1233640:intron | 15.0% |
!! | TTATTATATCAAAATGATCT+AGG | + | chr8_2:10500567-10500586 | None:intergenic | 15.0% |
!! | TTTGTTTGAAAAATATTGTA+TGG | - | chr8_2:10500821-10500840 | Msa1233640:intron | 15.0% |
!!! | ATTAATGTCTTTTTAACAAA+TGG | + | chr8_2:10500952-10500971 | None:intergenic | 15.0% |
!!! | TATGTAATTAGTTTGTTATT+TGG | + | chr8_2:10501032-10501051 | None:intergenic | 15.0% |
!!! | AATACCCATGTTTTTTTTAA+AGG | - | chr8_2:10494507-10494526 | Msa1233640:CDS | 20.0% |
!!! | TTGACCTTTAAAAAAAACAT+GGG | + | chr8_2:10494514-10494533 | None:intergenic | 20.0% |
!!! | TTTGACCTTTAAAAAAAACA+TGG | + | chr8_2:10494515-10494534 | None:intergenic | 20.0% |
!!! | TTTAGACTTTTGAAACTTAA+AGG | + | chr8_2:10494582-10494601 | None:intergenic | 20.0% |
!! | AATTTAGTTATTTGATTGGT+AGG | - | chr8_2:10495057-10495076 | Msa1233640:intron | 20.0% |
!!! | TGGATTTTAACAGAATAAAA+AGG | - | chr8_2:10495114-10495133 | Msa1233640:intron | 20.0% |
!!! | GATATTCACAAATTTTAGAT+AGG | + | chr8_2:10495500-10495519 | None:intergenic | 20.0% |
!!! | TATGCATATTACATTTTGAT+TGG | + | chr8_2:10495636-10495655 | None:intergenic | 20.0% |
!!! | TGTATATTTTAACATAAGAG+TGG | + | chr8_2:10496431-10496450 | None:intergenic | 20.0% |
!!! | AGATTTTATTTTTAAAGGGA+GGG | + | chr8_2:10495836-10495855 | None:intergenic | 20.0% |
!!! | TAGATTTTATTTTTAAAGGG+AGG | + | chr8_2:10495837-10495856 | None:intergenic | 20.0% |
!! | TATTTAATTATTAAGGGAGA+GGG | + | chr8_2:10495893-10495912 | None:intergenic | 20.0% |
!! | ATATTTAATTATTAAGGGAG+AGG | + | chr8_2:10495894-10495913 | None:intergenic | 20.0% |
!!! | ATAAAATAAAAAAGTACTGG+GGG | + | chr8_2:10496243-10496262 | None:intergenic | 20.0% |
!!! | GAAATGTTTTCTAATATGTT+TGG | - | chr8_2:10496390-10496409 | Msa1233640:CDS | 20.0% |
!!! | TTTCTAATATGTTTGGAATA+AGG | - | chr8_2:10496397-10496416 | Msa1233640:CDS | 20.0% |
!!! | TTCTAATATGTTTGGAATAA+GGG | - | chr8_2:10496398-10496417 | Msa1233640:CDS | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | - | chr8_2:10496431-10496450 | Msa1233640:intron | 20.0% |
!! | TGTAATTCAAAAATCTTTGA+GGG | - | chr8_2:10496461-10496480 | Msa1233640:intron | 20.0% |
!! | CAAAATTGAACAATCAAAAT+GGG | + | chr8_2:10497209-10497228 | None:intergenic | 20.0% |
!! | ACAAAATTGAACAATCAAAA+TGG | + | chr8_2:10497208-10497227 | None:intergenic | 20.0% |
!!! | CTTTTTGATTTGATTTTTCT+TGG | + | chr8_2:10497072-10497091 | None:intergenic | 20.0% |
!! | ACAAAATTGAACAATCAAAA+TGG | - | chr8_2:10497208-10497227 | Msa1233640:CDS | 20.0% |
!! | CAAAATTGAACAATCAAAAT+GGG | - | chr8_2:10497209-10497228 | Msa1233640:CDS | 20.0% |
!! | GAATGTAATCGATAAATTTA+AGG | - | chr8_2:10497247-10497266 | Msa1233640:intron | 20.0% |
!! | TGAACACCTAAATATAATTA+AGG | - | chr8_2:10497345-10497364 | Msa1233640:intron | 20.0% |
!! | ATCTTGCCTTAATTATATTT+AGG | + | chr8_2:10497354-10497373 | None:intergenic | 20.0% |
!! | TAACATTAATTCACGATATT+TGG | + | chr8_2:10497649-10497668 | None:intergenic | 20.0% |
!!! | ATCTTTATTTTTTTCCGTTT+AGG | + | chr8_2:10498225-10498244 | None:intergenic | 20.0% |
!! | ACGGAAAAAAATAAAGATAA+AGG | - | chr8_2:10498227-10498246 | Msa1233640:intron | 20.0% |
!! | CTTATTTATTTGTAACACTT+TGG | + | chr8_2:10498254-10498273 | None:intergenic | 20.0% |
!! | TATAGACAAGATTACATTAT+AGG | + | chr8_2:10498285-10498304 | None:intergenic | 20.0% |
!! | TGGTAATAACTATAATCATT+GGG | + | chr8_2:10498480-10498499 | None:intergenic | 20.0% |
!! | TTACTACTATCAACTTATTA+CGG | + | chr8_2:10498538-10498557 | None:intergenic | 20.0% |
!! | CGTAATATTGAATTGAAATT+GGG | + | chr8_2:10498704-10498723 | None:intergenic | 20.0% |
!! | ACGTAATATTGAATTGAAAT+TGG | + | chr8_2:10498705-10498724 | None:intergenic | 20.0% |
!! | AATTCAATATTACGTTTGAA+TGG | - | chr8_2:10498710-10498729 | Msa1233640:intron | 20.0% |
!! | ATTCAATATTACGTTTGAAT+GGG | - | chr8_2:10498711-10498730 | Msa1233640:intron | 20.0% |
!! | TTAAATATATTGCGATAACT+TGG | + | chr8_2:10499739-10499758 | None:intergenic | 20.0% |
!! | ATGTACAAAAGAAATAAAGA+AGG | - | chr8_2:10499931-10499950 | Msa1233640:intron | 20.0% |
!! | TATAATGCATACATAGTAAT+TGG | - | chr8_2:10499975-10499994 | Msa1233640:intron | 20.0% |
!! | AATAAATATAGAAAGCAATG+AGG | + | chr8_2:10500008-10500027 | None:intergenic | 20.0% |
!!! | ATCTTTAACATCTTTATTTG+GGG | + | chr8_2:10500454-10500473 | None:intergenic | 20.0% |
!!! | CATCTTTAACATCTTTATTT+GGG | + | chr8_2:10500455-10500474 | None:intergenic | 20.0% |
!! | TCATCTTTAACATCTTTATT+TGG | + | chr8_2:10500456-10500475 | None:intergenic | 20.0% |
!! | GAACTAAAAGTTTATGAATT+GGG | + | chr8_2:10500719-10500738 | None:intergenic | 20.0% |
!!! | TTTAAGTTATTGATTCACTT+GGG | + | chr8_2:10501000-10501019 | None:intergenic | 20.0% |
!!! | TTTTAAGTTATTGATTCACT+TGG | + | chr8_2:10501001-10501020 | None:intergenic | 20.0% |
!! | AAACACGCAAAAAAAAAATA+CGG | + | chr8_2:10501158-10501177 | None:intergenic | 20.0% |
!! | AAAGAAATTGATTGAAATTG+AGG | - | chr8_2:10501801-10501820 | Msa1233640:intron | 20.0% |
! | TCTATACACAAATGACAATT+TGG | - | chr8_2:10494434-10494453 | Msa1233640:CDS | 25.0% |
! | GAAACGATTCAAAAACTAAA+AGG | + | chr8_2:10494611-10494630 | None:intergenic | 25.0% |
!!! | ATTTTTTTAGGCATGACAAA+TGG | - | chr8_2:10494727-10494746 | Msa1233640:CDS | 25.0% |
! | AACTATTCTTATTAAAAGGG+AGG | - | chr8_2:10494951-10494970 | Msa1233640:CDS | 25.0% |
! | ACTATTCTTATTAAAAGGGA+GGG | - | chr8_2:10494952-10494971 | Msa1233640:CDS | 25.0% |
!! | TAAACATTTTTATCTGATCC+AGG | + | chr8_2:10495140-10495159 | None:intergenic | 25.0% |
! | GTGAATATCTTTGTTGAAAT+AGG | - | chr8_2:10495511-10495530 | Msa1233640:CDS | 25.0% |
!!! | TATTTTAACATAAGAGTGGA+GGG | + | chr8_2:10495806-10495825 | None:intergenic | 25.0% |
!!! | ATATTTTAACATAAGAGTGG+AGG | + | chr8_2:10495807-10495826 | None:intergenic | 25.0% |
! | TGTAATTCAAGCATCTTATA+GGG | + | chr8_2:10495869-10495888 | None:intergenic | 25.0% |
! | TTGTAATTCAAGCATCTTAT+AGG | + | chr8_2:10495870-10495889 | None:intergenic | 25.0% |
!! | TCTAATATGTTTGGAATAAG+GGG | - | chr8_2:10496399-10496418 | Msa1233640:CDS | 25.0% |
! | GTGTAATTCAAAAATCTTTG+AGG | - | chr8_2:10496460-10496479 | Msa1233640:intron | 25.0% |
! | GTAATTCAAAAATCTTTGAG+GGG | - | chr8_2:10496462-10496481 | Msa1233640:intron | 25.0% |
! | TACATCAAATTTCTTTCATC+TGG | - | chr8_2:10496575-10496594 | Msa1233640:CDS | 25.0% |
! | GAATGTAAGTGATGAATTTA+AGG | + | chr8_2:10496605-10496624 | None:intergenic | 25.0% |
! | GAAACAAGAATTGATCAATA+GGG | + | chr8_2:10496705-10496724 | None:intergenic | 25.0% |
! | AGAAACAAGAATTGATCAAT+AGG | + | chr8_2:10496706-10496725 | None:intergenic | 25.0% |
! | AAGTCATCTGTTATACTTTA+AGG | + | chr8_2:10497019-10497038 | None:intergenic | 25.0% |
! | ATTAATTTACACTACAAGAC+TGG | + | chr8_2:10496536-10496555 | None:intergenic | 25.0% |
! | AATTAAGGCAAGATTACATT+AGG | - | chr8_2:10497360-10497379 | Msa1233640:CDS | 25.0% |
! | ATTAAGGCAAGATTACATTA+GGG | - | chr8_2:10497361-10497380 | Msa1233640:CDS | 25.0% |
!!! | TATCTTTATTTTTCCCGTTT+AGG | - | chr8_2:10497421-10497440 | Msa1233640:CDS | 25.0% |
! | TGTGTTTAAAAGAAGATTTG+AGG | + | chr8_2:10497964-10497983 | None:intergenic | 25.0% |
! | TTGCAACATTTGTGAAATTA+AGG | + | chr8_2:10497711-10497730 | None:intergenic | 25.0% |
! | TTAATTTCACAAATGTTGCA+AGG | - | chr8_2:10497710-10497729 | Msa1233640:intron | 25.0% |
! | TACAAAAGTTAAGATTGTTC+TGG | - | chr8_2:10497774-10497793 | Msa1233640:intron | 25.0% |
!!! | TTTTGAGGTTATTTTTATGC+CGG | - | chr8_2:10497831-10497850 | Msa1233640:intron | 25.0% |
! | TGTGTTTAAAAGAAGATTTG+AGG | - | chr8_2:10497964-10497983 | Msa1233640:intron | 25.0% |
! | GTGGTAATAACTATAATCAT+TGG | + | chr8_2:10498481-10498500 | None:intergenic | 25.0% |
! | TACTACTATCAACTTATTAC+GGG | + | chr8_2:10498537-10498556 | None:intergenic | 25.0% |
!! | GATATTTTTCATTACCTTGT+TGG | + | chr8_2:10498914-10498933 | None:intergenic | 25.0% |
! | TCATAAGTAGAGTAAACATT+TGG | + | chr8_2:10499363-10499382 | None:intergenic | 25.0% |
! | TACTTAGTATATCAGTATCA+CGG | + | chr8_2:10499579-10499598 | None:intergenic | 25.0% |
! | AATCATATAAAGAAAGCTCA+TGG | - | chr8_2:10499769-10499788 | Msa1233640:intron | 25.0% |
!! | AATTTTGTTACTATGAGTAG+AGG | - | chr8_2:10499802-10499821 | Msa1233640:intron | 25.0% |
! | TTGCTTTCTATATTTATTGC+AGG | - | chr8_2:10500010-10500029 | Msa1233640:intron | 25.0% |
! | AAGTTAGATAGTAAACTCTA+TGG | - | chr8_2:10500050-10500069 | Msa1233640:intron | 25.0% |
!! | AACCATTCTTTTTGTTAAAG+AGG | - | chr8_2:10500341-10500360 | Msa1233640:intron | 25.0% |
! | ATCCTCTTTAACAAAAAGAA+TGG | + | chr8_2:10500346-10500365 | None:intergenic | 25.0% |
!! | ATTCTTTTTGTTAAAGAGGA+TGG | - | chr8_2:10500345-10500364 | Msa1233640:intron | 25.0% |
!! | TCTTTAACATCTTTATTTGG+GGG | + | chr8_2:10500453-10500472 | None:intergenic | 25.0% |
! | GGAACTAAAAGTTTATGAAT+TGG | + | chr8_2:10500720-10500739 | None:intergenic | 25.0% |
! | TACCTACTGATCTAAAAAAT+AGG | - | chr8_2:10500892-10500911 | Msa1233640:intron | 25.0% |
!!! | TACCTATTTTTTAGATCAGT+AGG | + | chr8_2:10500897-10500916 | None:intergenic | 25.0% |
! | TATTGCAAAACATTACATCT+TGG | - | chr8_2:10500920-10500939 | Msa1233640:intron | 25.0% |
!!! | TAGTTTGTTATTTGGTAGTT+AGG | + | chr8_2:10501024-10501043 | None:intergenic | 25.0% |
! | TAAAGATGTTAAAGATGATG+AGG | - | chr8_2:10501351-10501370 | Msa1233640:intron | 25.0% |
!! | AATTTTGGACAATATCAGTA+CGG | - | chr8_2:10501520-10501539 | Msa1233640:intron | 25.0% |
!!! | ATGAATCTTATGGTTTTAGT+TGG | + | chr8_2:10501565-10501584 | None:intergenic | 25.0% |
! | CATAGTATTCATAACTTCAA+GGG | + | chr8_2:10501674-10501693 | None:intergenic | 25.0% |
!! | TTTCTTTGCAAACTTTTTGT+AGG | + | chr8_2:10501788-10501807 | None:intergenic | 25.0% |
ATCTTATAATTATGGACGGA+TGG | + | chr8_2:10494344-10494363 | None:intergenic | 30.0% | |
TGGGTATTAAAGAAAGTTGT+TGG | + | chr8_2:10494495-10494514 | None:intergenic | 30.0% | |
TAAAGGTCAAATGCATCTAA+AGG | - | chr8_2:10494524-10494543 | Msa1233640:CDS | 30.0% | |
!!! | GTTTTTAGTTTTTCCCAAAG+TGG | - | chr8_2:10494555-10494574 | Msa1233640:CDS | 30.0% |
CTTATTGTAGATAGCATAGT+TGG | - | chr8_2:10494639-10494658 | Msa1233640:CDS | 30.0% | |
!! | ACTAATTTTAAGTGGGTGTT+AGG | + | chr8_2:10494706-10494725 | None:intergenic | 30.0% |
! | TTTCAAACAAGTCCTTTTAG+AGG | + | chr8_2:10494797-10494816 | None:intergenic | 30.0% |
GAAACGATTCAAAAACGAAA+AGG | - | chr8_2:10494813-10494832 | Msa1233640:CDS | 30.0% | |
! | AAAAACGAAAAGGACTTGTT+TGG | - | chr8_2:10494823-10494842 | Msa1233640:CDS | 30.0% |
! | AAAACGAAAAGGACTTGTTT+GGG | - | chr8_2:10494824-10494843 | Msa1233640:CDS | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr8_2:10494842-10494861 | Msa1233640:CDS | 30.0% |
! | TGAAACTTAAAGGACTTGTT+TGG | - | chr8_2:10494852-10494871 | Msa1233640:CDS | 30.0% |
! | GAAACTTAAAGGACTTGTTT+GGG | - | chr8_2:10494853-10494872 | Msa1233640:CDS | 30.0% |
TGAAACTTAAATGACCACTT+TGG | - | chr8_2:10494881-10494900 | Msa1233640:CDS | 30.0% | |
GAAACTTAAATGACCACTTT+GGG | - | chr8_2:10494882-10494901 | Msa1233640:CDS | 30.0% | |
AAAAGGTGAAATGCATCTAA+AGG | + | chr8_2:10494928-10494947 | None:intergenic | 30.0% | |
TTTAACAGAATAAAAAGGCC+TGG | - | chr8_2:10495119-10495138 | Msa1233640:intron | 30.0% | |
! | TTTTAGATAGGGAGTTTCTA+CGG | + | chr8_2:10495488-10495507 | None:intergenic | 30.0% |
! | TGTTTTCTTCTCAAGAAAGT+AGG | - | chr8_2:10495540-10495559 | Msa1233640:CDS | 30.0% |
AGAAAGTAGGAACAATGATT+AGG | - | chr8_2:10495553-10495572 | Msa1233640:CDS | 30.0% | |
!! | ATTTTAACATAAGAGTGGAG+GGG | + | chr8_2:10495805-10495824 | None:intergenic | 30.0% |
TGTAATTCAAGCTTCTCTTA+AGG | - | chr8_2:10496358-10496377 | Msa1233640:intron | 30.0% | |
GTAATTCAAGCTTCTCTTAA+GGG | - | chr8_2:10496359-10496378 | Msa1233640:intron | 30.0% | |
!!! | ATATTTTAACATAAGAGGGG+AGG | - | chr8_2:10496434-10496453 | Msa1233640:intron | 30.0% |
!!! | TATTTTAACATAAGAGGGGA+GGG | - | chr8_2:10496435-10496454 | Msa1233640:intron | 30.0% |
CAATCAAAATGGGAAGATAA+TGG | + | chr8_2:10496732-10496751 | None:intergenic | 30.0% | |
!! | GTTCTTTTGTTTGGACTTAA+AGG | + | chr8_2:10496906-10496925 | None:intergenic | 30.0% |
!! | TTTGATTTTTCTTGGTTGTG+AGG | + | chr8_2:10497064-10497083 | None:intergenic | 30.0% |
CTCACGAAAATTGAAAAATG+CGG | - | chr8_2:10497176-10497195 | Msa1233640:CDS | 30.0% | |
TTAAGGCAAGATTACATTAG+GGG | - | chr8_2:10497362-10497381 | Msa1233640:CDS | 30.0% | |
!! | TGTGCTTTTAAGAGAGATAA+AGG | + | chr8_2:10497448-10497467 | None:intergenic | 30.0% |
GAACATCTTCATCATATTTC+TGG | + | chr8_2:10497555-10497574 | None:intergenic | 30.0% | |
AGAAGATGATGAAGATTCAA+AGG | + | chr8_2:10497595-10497614 | None:intergenic | 30.0% | |
!!! | TTTGAGGTTATTTTTATGCC+GGG | - | chr8_2:10497832-10497851 | Msa1233640:intron | 30.0% |
TCTAACTCAATATTCAAACC+CGG | + | chr8_2:10497853-10497872 | None:intergenic | 30.0% | |
GAAGATTCAAAGAAAGAAGA+TGG | - | chr8_2:10498059-10498078 | Msa1233640:intron | 30.0% | |
GTACATCTTCATCATATTTC+TGG | - | chr8_2:10498089-10498108 | Msa1233640:intron | 30.0% | |
TGAGAGATAAAAGACCTAAA+CGG | - | chr8_2:10498208-10498227 | Msa1233640:intron | 30.0% | |
! | TTTGATTGGTTGATATCATG+AGG | - | chr8_2:10498412-10498431 | Msa1233640:intron | 30.0% |
! | TTGATTGGTTGATATCATGA+GGG | - | chr8_2:10498413-10498432 | Msa1233640:intron | 30.0% |
CCTATATTTAGAGATGAAAG+TGG | + | chr8_2:10498500-10498519 | None:intergenic | 30.0% | |
CCACTTTCATCTCTAAATAT+AGG | - | chr8_2:10498497-10498516 | Msa1233640:intron | 30.0% | |
ACTACTATCAACTTATTACG+GGG | + | chr8_2:10498536-10498555 | None:intergenic | 30.0% | |
!! | CTACTTTCTGAAATTTGTGT+AGG | - | chr8_2:10498616-10498635 | Msa1233640:intron | 30.0% |
! | TCTGAAATTTGTGTAGGAAA+TGG | - | chr8_2:10498622-10498641 | Msa1233640:intron | 30.0% |
ATTTGTGTAGGAAATGGAAA+AGG | - | chr8_2:10498628-10498647 | Msa1233640:intron | 30.0% | |
TCTTGTCTATAGTAGACTAA+TGG | + | chr8_2:10499046-10499065 | None:intergenic | 30.0% | |
GTAAATTCAACAAAACATCG+AGG | - | chr8_2:10499596-10499615 | Msa1233640:intron | 30.0% | |
!! | CACTGATTTAGCATTAATTG+GGG | + | chr8_2:10499635-10499654 | None:intergenic | 30.0% |
!! | CCACTGATTTAGCATTAATT+GGG | + | chr8_2:10499636-10499655 | None:intergenic | 30.0% |
GTGATTGCAGGTATATATAT+TGG | - | chr8_2:10499685-10499704 | Msa1233640:intron | 30.0% | |
TTGGATATATTGCGATAACT+TGG | + | chr8_2:10499720-10499739 | None:intergenic | 30.0% | |
!! | ATTTACCAGAAGTTTTTCGA+TGG | + | chr8_2:10499894-10499913 | None:intergenic | 30.0% |
TTCAATCAATTGAACTACAC+AGG | - | chr8_2:10500194-10500213 | Msa1233640:intron | 30.0% | |
ATGCAATCTATCCATATTTG+AGG | - | chr8_2:10500280-10500299 | Msa1233640:intron | 30.0% | |
GCATTTACTTTCCTCAAATA+TGG | + | chr8_2:10500294-10500313 | None:intergenic | 30.0% | |
AAGATGACGAACCTTTAATT+TGG | - | chr8_2:10500469-10500488 | Msa1233640:intron | 30.0% | |
TATACATTTACTTGTGTCAC+AGG | - | chr8_2:10500628-10500647 | Msa1233640:intron | 30.0% | |
AAATATCTTGATCAATGCAG+AGG | - | chr8_2:10500779-10500798 | Msa1233640:intron | 30.0% | |
AATATCTTGATCAATGCAGA+GGG | - | chr8_2:10500780-10500799 | Msa1233640:intron | 30.0% | |
GCAAAAAAAAAATACGGAAG+GGG | + | chr8_2:10501152-10501171 | None:intergenic | 30.0% | |
CGCAAAAAAAAAATACGGAA+GGG | + | chr8_2:10501153-10501172 | None:intergenic | 30.0% | |
ACGCAAAAAAAAAATACGGA+AGG | + | chr8_2:10501154-10501173 | None:intergenic | 30.0% | |
CTTTCTTGCTTATTATCTAG+AGG | - | chr8_2:10501187-10501206 | Msa1233640:intron | 30.0% | |
!!! | ATCTTATGGTTTTAGTTGGT+CGG | + | chr8_2:10501561-10501580 | None:intergenic | 30.0% |
GCATAGTATTCATAACTTCA+AGG | + | chr8_2:10501675-10501694 | None:intergenic | 30.0% | |
TGAAGTTATGAATACTATGC+TGG | - | chr8_2:10501675-10501694 | Msa1233640:intron | 30.0% | |
ATGATGAGTCATTGAAAAAC+CGG | - | chr8_2:10501845-10501864 | Msa1233640:intron | 30.0% | |
! | TTTTAGATGGAGACACTATT+GGG | + | chr8_2:10501943-10501962 | None:intergenic | 30.0% |
! | TTTTTAGATGGAGACACTAT+TGG | + | chr8_2:10501944-10501963 | None:intergenic | 30.0% |
! | GCTTTGAATAAAAGATGAGA+AGG | - | chr8_2:10501990-10502009 | Msa1233640:CDS | 30.0% |
AGTGTTAGCTAAGAACAACA+AGG | - | chr8_2:10494170-10494189 | Msa1233640:three_prime_UTR | 35.0% | |
AACAAGGTCACAAAGCTTAA+GGG | - | chr8_2:10494186-10494205 | Msa1233640:three_prime_UTR | 35.0% | |
CAGATTGATTAGTGATTCCA+CGG | - | chr8_2:10494278-10494297 | Msa1233640:three_prime_UTR | 35.0% | |
GAAACTTAAAGGACCACTTT+GGG | + | chr8_2:10494571-10494590 | None:intergenic | 35.0% | |
TGAAACTTAAAGGACCACTT+TGG | + | chr8_2:10494572-10494591 | None:intergenic | 35.0% | |
!! | TTTTTAGGCATGACAAATGG+TGG | - | chr8_2:10494730-10494749 | Msa1233640:CDS | 35.0% |
!! | GTTTTTCGTTTTTCCCAAAG+TGG | + | chr8_2:10494898-10494917 | None:intergenic | 35.0% |
ATTCTTATTAAAAGGGAGGG+AGG | - | chr8_2:10494955-10494974 | Msa1233640:CDS | 35.0% | |
TTCTTATTAAAAGGGAGGGA+GGG | - | chr8_2:10494956-10494975 | Msa1233640:CDS | 35.0% | |
CTGTTAAAATCCAGTTCTCA+GGG | + | chr8_2:10495107-10495126 | None:intergenic | 35.0% | |
TCTGTTAAAATCCAGTTCTC+AGG | + | chr8_2:10495108-10495127 | None:intergenic | 35.0% | |
ATTACCCCTTAAACAAGAGA+GGG | + | chr8_2:10495593-10495612 | None:intergenic | 35.0% | |
AATTACCCCTTAAACAAGAG+AGG | + | chr8_2:10495594-10495613 | None:intergenic | 35.0% | |
! | GATTGGTTGATATCATGAGA+GGG | + | chr8_2:10495619-10495638 | None:intergenic | 35.0% |
! | TGATTGGTTGATATCATGAG+AGG | + | chr8_2:10498414-10498433 | None:intergenic | 35.0% |
!! | ATTTTAACATAAGAGGGGAG+GGG | - | chr8_2:10496436-10496455 | Msa1233640:intron | 35.0% |
!! | ATGTTTTTGTTCTCACGTTC+GGG | + | chr8_2:10496652-10496671 | None:intergenic | 35.0% |
!! | GATGTTTTTGTTCTCACGTT+CGG | + | chr8_2:10496653-10496672 | None:intergenic | 35.0% |
! | AATTTGAAACTGCAGCAGTT+TGG | + | chr8_2:10496770-10496789 | None:intergenic | 35.0% |
! | GCGTGTTAGCAGATTTTATT+AGG | + | chr8_2:10496860-10496879 | None:intergenic | 35.0% |
TTGTTTGGACTTAAAGGCTT+TGG | + | chr8_2:10496900-10496919 | None:intergenic | 35.0% | |
! | GAGGCTTTTGTTCTTTTGTT+TGG | + | chr8_2:10496915-10496934 | None:intergenic | 35.0% |
!!! | GAGTTTGCTAGCATCTTTTT+CGG | + | chr8_2:10496962-10496981 | None:intergenic | 35.0% |
! | ATACTTTAAGGATTGCTAGC+AGG | + | chr8_2:10497007-10497026 | None:intergenic | 35.0% |
!! | TGACATGGTTCTGGAAATAA+CGG | - | chr8_2:10497112-10497131 | Msa1233640:CDS | 35.0% |
ACGGTAATTCTCACGATATT+TGG | - | chr8_2:10497131-10497150 | Msa1233640:CDS | 35.0% | |
AGAGAGATAAAGGACCTAAA+CGG | + | chr8_2:10497438-10497457 | None:intergenic | 35.0% | |
ATTTCACAAATGTTGCAAGG+AGG | - | chr8_2:10497713-10497732 | Msa1233640:intron | 35.0% | |
! | TGATTGGTTGATATCATGAG+GGG | - | chr8_2:10498414-10498433 | Msa1233640:intron | 35.0% |
AAATACCCTCTAAACAAGAG+AGG | - | chr8_2:10498439-10498458 | Msa1233640:intron | 35.0% | |
AATACCCTCTAAACAAGAGA+GGG | - | chr8_2:10498440-10498459 | Msa1233640:intron | 35.0% | |
! | ATTACCCTCTCTTGTTTAGA+GGG | + | chr8_2:10498447-10498466 | None:intergenic | 35.0% |
AGGAAATGGAAAAGGAAAAG+TGG | - | chr8_2:10498636-10498655 | Msa1233640:intron | 35.0% | |
GGAAATGGAAAAGGAAAAGT+GGG | - | chr8_2:10498637-10498656 | Msa1233640:intron | 35.0% | |
!! | TTTGGGAAGTCTTATTACCT+CGG | - | chr8_2:10498672-10498691 | Msa1233640:intron | 35.0% |
! | TCCAAGATTTGGAACATCAA+GGG | + | chr8_2:10498821-10498840 | None:intergenic | 35.0% |
! | TTCCAAGATTTGGAACATCA+AGG | + | chr8_2:10498822-10498841 | None:intergenic | 35.0% |
!! | AAGTTGATGGTTCCAAGATT+TGG | + | chr8_2:10498832-10498851 | None:intergenic | 35.0% |
TGAGTTGCAGATAAAGTTGA+TGG | + | chr8_2:10498845-10498864 | None:intergenic | 35.0% | |
TCAACTTTATCTGCAACTCA+TGG | - | chr8_2:10498845-10498864 | Msa1233640:intron | 35.0% | |
GAAGAGTTGAAGACTTTAAG+AGG | - | chr8_2:10499064-10499083 | Msa1233640:intron | 35.0% | |
! | TTGAAGACTTTAAGAGGAGA+TGG | - | chr8_2:10499070-10499089 | Msa1233640:intron | 35.0% |
CTACGATGTCTACAATGATT+TGG | - | chr8_2:10499129-10499148 | Msa1233640:intron | 35.0% | |
AGAACCAAGTAAGAAAGGTA+AGG | - | chr8_2:10499255-10499274 | Msa1233640:intron | 35.0% | |
!!! | CGACTATTATTTTGAGACAC+AGG | + | chr8_2:10499316-10499335 | None:intergenic | 35.0% |
GTGTGAAGTAATTCATCTCT+TGG | + | chr8_2:10499481-10499500 | None:intergenic | 35.0% | |
ATTAATTGGGGAAAGTTCGT+TGG | + | chr8_2:10499623-10499642 | None:intergenic | 35.0% | |
CCCAATTAATGCTAAATCAG+TGG | - | chr8_2:10499633-10499652 | Msa1233640:intron | 35.0% | |
!! | GCCACTGATTTAGCATTAAT+TGG | + | chr8_2:10499637-10499656 | None:intergenic | 35.0% |
TATATACCTGCAATCACTTG+TGG | + | chr8_2:10499682-10499701 | None:intergenic | 35.0% | |
!! | AGAAGTTTTTCGATGGCATT+CGG | + | chr8_2:10499887-10499906 | None:intergenic | 35.0% |
!! | CTATCTAACTTGCTCTTTCT+TGG | + | chr8_2:10500041-10500060 | None:intergenic | 35.0% |
CACAATAACCAAAGAACACT+TGG | - | chr8_2:10500085-10500104 | Msa1233640:intron | 35.0% | |
AATATGGATAGATTGCATCG+TGG | + | chr8_2:10500278-10500297 | None:intergenic | 35.0% | |
AAACTATCACCATTAGGATG+TGG | + | chr8_2:10500405-10500424 | None:intergenic | 35.0% | |
! | CATCCTAATGGTGATAGTTT+TGG | - | chr8_2:10500405-10500424 | Msa1233640:intron | 35.0% |
GGCAAGTAAACATTACTAAC+AGG | + | chr8_2:10500432-10500451 | None:intergenic | 35.0% | |
TTTGCAAGGAGCCAAATTAA+AGG | + | chr8_2:10500483-10500502 | None:intergenic | 35.0% | |
!! | TTTAATTTGGCTCCTTGCAA+AGG | - | chr8_2:10500482-10500501 | Msa1233640:intron | 35.0% |
ATCTAGGAAATTCTCACCAA+TGG | + | chr8_2:10500551-10500570 | None:intergenic | 35.0% | |
! | CTATTTGTTGCTATGACGAA+TGG | + | chr8_2:10500678-10500697 | None:intergenic | 35.0% |
CATTCGTCATAGCAACAAAT+AGG | - | chr8_2:10500676-10500695 | Msa1233640:intron | 35.0% | |
ATTTCGTGATCGTGCATTTA+TGG | + | chr8_2:10500763-10500782 | None:intergenic | 35.0% | |
! | AATGTCAGCTGTTGTTTACA+AGG | - | chr8_2:10500845-10500864 | Msa1233640:intron | 35.0% |
! | AGCTGTTGTTTACAAGGATT+GGG | - | chr8_2:10500851-10500870 | Msa1233640:intron | 35.0% |
AAAAAAAAATACGGAAGGGG+TGG | + | chr8_2:10501149-10501168 | None:intergenic | 35.0% | |
TTGCTTATTATCTAGAGGAG+TGG | - | chr8_2:10501192-10501211 | Msa1233640:intron | 35.0% | |
GATTATCCATATGCTGTTGA+TGG | - | chr8_2:10501262-10501281 | Msa1233640:intron | 35.0% | |
!! | TGTTGATGGACTAGAGATAT+GGG | - | chr8_2:10501276-10501295 | Msa1233640:intron | 35.0% |
TTGGAAAGAACTTGTAGAAG+TGG | - | chr8_2:10501387-10501406 | Msa1233640:intron | 35.0% | |
TGGAAAGAACTTGTAGAAGT+GGG | - | chr8_2:10501388-10501407 | Msa1233640:intron | 35.0% | |
TGACTTGAAGAATGCTAAGT+GGG | - | chr8_2:10501417-10501436 | Msa1233640:intron | 35.0% | |
!! | GAATGCTAAGTGGGTTAAAA+TGG | - | chr8_2:10501426-10501445 | Msa1233640:intron | 35.0% |
! | CTTCATGCAGCTGTTAATTT+TGG | - | chr8_2:10501505-10501524 | Msa1233640:intron | 35.0% |
TTTCTCTGGCATGAATCTTA+TGG | + | chr8_2:10501575-10501594 | None:intergenic | 35.0% | |
ATAAGATTCATGCCAGAGAA+AGG | - | chr8_2:10501574-10501593 | Msa1233640:intron | 35.0% | |
GGACTACATGAAGACATATT+TGG | - | chr8_2:10501624-10501643 | Msa1233640:intron | 35.0% | |
AAAGAACTGAAGGTGATCTT+TGG | - | chr8_2:10501737-10501756 | Msa1233640:intron | 35.0% | |
! | AACTTTTTGTAGGCTTCTAC+TGG | + | chr8_2:10501778-10501797 | None:intergenic | 35.0% |
TTGAGGAAGAGTTCATTCAA+AGG | - | chr8_2:10501818-10501837 | Msa1233640:intron | 35.0% | |
AGTCATTGAAAAACCGGTAT+GGG | - | chr8_2:10501851-10501870 | Msa1233640:intron | 35.0% | |
! | GAAGGATAAAGAAGAGTGTA+TGG | + | chr8_2:10501889-10501908 | None:intergenic | 35.0% |
TCTCCATCTAAAAAAAGCCA+TGG | - | chr8_2:10501950-10501969 | Msa1233640:intron | 35.0% | |
!!! | CAACCATGGCTTTTTTTAGA+TGG | + | chr8_2:10501956-10501975 | None:intergenic | 35.0% |
AACAAACAACACAACAACCA+TGG | + | chr8_2:10501970-10501989 | None:intergenic | 35.0% | |
CAACAAGGTCACAAAGCTTA+AGG | - | chr8_2:10494185-10494204 | Msa1233640:three_prime_UTR | 40.0% | |
TGCTTCCTTGAACTCATCTT+TGG | - | chr8_2:10494666-10494685 | Msa1233640:CDS | 40.0% | |
TGGTACCAAAGATGAGTTCA+AGG | + | chr8_2:10494674-10494693 | None:intergenic | 40.0% | |
CATCACCATCATCCTCTAAA+AGG | - | chr8_2:10494782-10494801 | Msa1233640:CDS | 40.0% | |
!! | CAAGTCCTTTTAGAGGATGA+TGG | + | chr8_2:10494790-10494809 | None:intergenic | 40.0% |
ATCCAGTTCTCAGGGAAAAT+GGG | + | chr8_2:10495099-10495118 | None:intergenic | 40.0% | |
AATCCAGTTCTCAGGGAAAA+TGG | + | chr8_2:10495100-10495119 | None:intergenic | 40.0% | |
! | ACGTTACCCTCTCTTGTTTA+AGG | - | chr8_2:10495584-10495603 | Msa1233640:CDS | 40.0% |
! | CGTTACCCTCTCTTGTTTAA+GGG | - | chr8_2:10495585-10495604 | Msa1233640:CDS | 40.0% |
! | GTTACCCTCTCTTGTTTAAG+GGG | - | chr8_2:10495586-10495605 | Msa1233640:CDS | 40.0% |
ATTCAAGCTTCTCTTAAGGG+AGG | - | chr8_2:10496362-10496381 | Msa1233640:CDS | 40.0% | |
TTCAAGCTTCTCTTAAGGGA+GGG | - | chr8_2:10496363-10496382 | Msa1233640:CDS | 40.0% | |
!! | TGTTTTTGTTCTCACGTTCG+GGG | + | chr8_2:10496651-10496670 | None:intergenic | 40.0% |
! | ACTTAAAGGCTTTGGCTGAT+AGG | + | chr8_2:10496892-10496911 | None:intergenic | 40.0% |
GCTGAAATGGTTATGTCATG+AGG | + | chr8_2:10496934-10496953 | None:intergenic | 40.0% | |
!! | TTTTTCGGTTGCTGCTGAAA+TGG | + | chr8_2:10496947-10496966 | None:intergenic | 40.0% |
AAACTCCCAAAACATCACAG+CGG | - | chr8_2:10496976-10496995 | Msa1233640:intron | 40.0% | |
! | GTTATTTCCAGAACCATGTC+AGG | + | chr8_2:10497113-10497132 | None:intergenic | 40.0% |
GAGAGATAAAGGACCTAAAC+GGG | + | chr8_2:10497437-10497456 | None:intergenic | 40.0% | |
AAATGTTGCAAGGAGGATAG+TGG | - | chr8_2:10497720-10497739 | Msa1233640:intron | 40.0% | |
! | CAAAGCTGCTCTCAATTTTG+AGG | - | chr8_2:10497816-10497835 | Msa1233640:intron | 40.0% |
! | GATTGGTTGATATCATGAGG+GGG | - | chr8_2:10498415-10498434 | Msa1233640:intron | 40.0% |
! | GATTACCCTCTCTTGTTTAG+AGG | + | chr8_2:10498448-10498467 | None:intergenic | 40.0% |
TTGAAATTGGGTTTCATCCG+AGG | + | chr8_2:10498692-10498711 | None:intergenic | 40.0% | |
TGAATGGGACACTGAAAAGA+TGG | - | chr8_2:10498726-10498745 | Msa1233640:intron | 40.0% | |
GAATGGGACACTGAAAAGAT+GGG | - | chr8_2:10498727-10498746 | Msa1233640:intron | 40.0% | |
TCTCGATAAAAAAAGCCCCT+GGG | + | chr8_2:10498762-10498781 | None:intergenic | 40.0% | |
TTCTCGATAAAAAAAGCCCC+TGG | + | chr8_2:10498763-10498782 | None:intergenic | 40.0% | |
ACCCTTGATGTTCCAAATCT+TGG | - | chr8_2:10498817-10498836 | Msa1233640:intron | 40.0% | |
CTATAGTAGACTAATGGAGC+TGG | + | chr8_2:10499040-10499059 | None:intergenic | 40.0% | |
! | GACTTTAAGAGGAGATGGAA+CGG | - | chr8_2:10499075-10499094 | Msa1233640:intron | 40.0% |
! | ACTTTAAGAGGAGATGGAAC+GGG | - | chr8_2:10499076-10499095 | Msa1233640:intron | 40.0% |
GGTAGAGAACCAAGTAAGAA+AGG | - | chr8_2:10499250-10499269 | Msa1233640:intron | 40.0% | |
! | GTAGCCTTACCTTTCTTACT+TGG | + | chr8_2:10499262-10499281 | None:intergenic | 40.0% |
CACAGGCAGTACAAAAATTG+AGG | + | chr8_2:10499299-10499318 | None:intergenic | 40.0% | |
GAGTGACAACACATCTTGAA+AGG | + | chr8_2:10499539-10499558 | None:intergenic | 40.0% | |
GAGTAGAGGATTATCATGCA+TGG | - | chr8_2:10499816-10499835 | Msa1233640:intron | 40.0% | |
AGAGGATTATCATGCATGGA+TGG | - | chr8_2:10499820-10499839 | Msa1233640:intron | 40.0% | |
TTTGCAAGACAGATGATTGC+TGG | - | chr8_2:10499854-10499873 | Msa1233640:intron | 40.0% | |
GAATGCCATCGAAAAACTTC+TGG | - | chr8_2:10499886-10499905 | Msa1233640:intron | 40.0% | |
GTGTTCTTTGGTTATTGTGC+TGG | + | chr8_2:10500084-10500103 | None:intergenic | 40.0% | |
!! | AAGAATGGTTCTAGCAGCAT+AGG | + | chr8_2:10500331-10500350 | None:intergenic | 40.0% |
GGATGGAACTTTGAATCCAT+TGG | - | chr8_2:10500362-10500381 | Msa1233640:intron | 40.0% | |
AAACTTAGCTCAATGGCCAA+TGG | + | chr8_2:10500381-10500400 | None:intergenic | 40.0% | |
ATGTGGCAAACTTAGCTCAA+TGG | + | chr8_2:10500388-10500407 | None:intergenic | 40.0% | |
CTAAGTTTGCCACATCCTAA+TGG | - | chr8_2:10500393-10500412 | Msa1233640:intron | 40.0% | |
GGACCAAAACTATCACCATT+AGG | + | chr8_2:10500411-10500430 | None:intergenic | 40.0% | |
!!! | CTTTTAGTTCCACACTATCG+TGG | - | chr8_2:10500729-10500748 | Msa1233640:intron | 40.0% |
! | CAGCTGTTGTTTACAAGGAT+TGG | - | chr8_2:10500850-10500869 | Msa1233640:intron | 40.0% |
TCTAGTCCATCAACAGCATA+TGG | + | chr8_2:10501271-10501290 | None:intergenic | 40.0% | |
!! | CTGTTGATGGACTAGAGATA+TGG | - | chr8_2:10501275-10501294 | Msa1233640:intron | 40.0% |
! | TATGGGCTGCTATTAAGTCA+TGG | - | chr8_2:10501293-10501312 | Msa1233640:intron | 40.0% |
! | ATGGGCTGCTATTAAGTCAT+GGG | - | chr8_2:10501294-10501313 | Msa1233640:intron | 40.0% |
!! | ATGAGGAACTCAGAGCATTT+TGG | - | chr8_2:10501368-10501387 | Msa1233640:intron | 40.0% |
GTGACTTGAAGAATGCTAAG+TGG | - | chr8_2:10501416-10501435 | Msa1233640:intron | 40.0% | |
TGCTGAAGCAATCCATATGA+GGG | + | chr8_2:10501485-10501504 | None:intergenic | 40.0% | |
TTTGGACAATATCAGTACGG+AGG | - | chr8_2:10501523-10501542 | Msa1233640:intron | 40.0% | |
TTGGACAATATCAGTACGGA+GGG | - | chr8_2:10501524-10501543 | Msa1233640:intron | 40.0% | |
!!! | TGGTTTTAGTTGGTCGGTTA+AGG | + | chr8_2:10501555-10501574 | None:intergenic | 40.0% |
GAAAGGATCCCATGAGTTTA+AGG | - | chr8_2:10501591-10501610 | Msa1233640:intron | 40.0% | |
TTTGGAGACAATCACACCAA+AGG | - | chr8_2:10501642-10501661 | Msa1233640:intron | 40.0% | |
ACTTCAAGGGTTTCAACCTT+TGG | + | chr8_2:10501661-10501680 | None:intergenic | 40.0% | |
ATCCATGCATGATCCTAATG+AGG | - | chr8_2:10501702-10501721 | Msa1233640:intron | 40.0% | |
TTCCTCATTAGGATCATGCA+TGG | + | chr8_2:10501707-10501726 | None:intergenic | 40.0% | |
GATCCTAATGAGGAATACCT+TGG | - | chr8_2:10501712-10501731 | Msa1233640:intron | 40.0% | |
! | TGTCCAAGGTATTCCTCATT+AGG | + | chr8_2:10501718-10501737 | None:intergenic | 40.0% |
TACCTTGGACAAAGAACTGA+AGG | - | chr8_2:10501727-10501746 | Msa1233640:intron | 40.0% | |
GAGTCATTGAAAAACCGGTA+TGG | - | chr8_2:10501850-10501869 | Msa1233640:intron | 40.0% | |
AGAGTGTATGGAAACTTCAC+AGG | + | chr8_2:10501877-10501896 | None:intergenic | 40.0% | |
ACTCTTCTTTATCCTTCCAG+TGG | - | chr8_2:10501892-10501911 | Msa1233640:intron | 40.0% | |
ACTTGATCAATTAGTGCAGC+TGG | + | chr8_2:10502047-10502066 | None:intergenic | 40.0% | |
ATTAGTGATTCCACGGCTGA+TGG | - | chr8_2:10494285-10494304 | Msa1233640:three_prime_UTR | 45.0% | |
GAAGTTATTACCATCAGCCG+TGG | + | chr8_2:10494298-10494317 | None:intergenic | 45.0% | |
TGGGTGTTAGGAGTCAGATT+TGG | + | chr8_2:10494694-10494713 | None:intergenic | 45.0% | |
TCAAGCTTCTCTTAAGGGAG+GGG | - | chr8_2:10496364-10496383 | Msa1233640:CDS | 45.0% | |
! | TGTTTGGAATAAGGGGAGAG+AGG | - | chr8_2:10496406-10496425 | Msa1233640:CDS | 45.0% |
AAAAGTCACGATACCTGACG+CGG | + | chr8_2:10496821-10496840 | None:intergenic | 45.0% | |
! | TGTTGCCGCTGTGATGTTTT+GGG | + | chr8_2:10496984-10497003 | None:intergenic | 45.0% |
TCAACTCACCATACCTGACA+TGG | - | chr8_2:10497097-10497116 | Msa1233640:CDS | 45.0% | |
TTCCAGAACCATGTCAGGTA+TGG | + | chr8_2:10497108-10497127 | None:intergenic | 45.0% | |
AGTGGGAGAGCGAACATATT+TGG | - | chr8_2:10498654-10498673 | Msa1233640:intron | 45.0% | |
GTGGGAGAGCGAACATATTT+GGG | - | chr8_2:10498655-10498674 | Msa1233640:intron | 45.0% | |
ATAAAAAAAGCCCCTGGGGA+TGG | + | chr8_2:10498757-10498776 | None:intergenic | 45.0% | |
CTCGATAAAAAAAGCCCCTG+GGG | + | chr8_2:10498761-10498780 | None:intergenic | 45.0% | |
CATCAAGGGTCAAACTCACA+AGG | + | chr8_2:10498807-10498826 | None:intergenic | 45.0% | |
GCGCATCTTCTTTACCAACA+AGG | - | chr8_2:10498897-10498916 | Msa1233640:intron | 45.0% | |
GAGCTGGTGTTTCACTTAGA+AGG | + | chr8_2:10499024-10499043 | None:intergenic | 45.0% | |
! | ACACTTTTCCTTACCCTCGA+AGG | - | chr8_2:10499218-10499237 | Msa1233640:intron | 45.0% |
! | CACTTTTCCTTACCCTCGAA+GGG | - | chr8_2:10499219-10499238 | Msa1233640:intron | 45.0% |
TACCAGATCTTACCCTTCGA+GGG | + | chr8_2:10499234-10499253 | None:intergenic | 45.0% | |
CAGATCCAAAGACTGAGAGT+CGG | - | chr8_2:10499437-10499456 | Msa1233640:intron | 45.0% | |
CCTGCAATCACTTGTGGTAT+TGG | + | chr8_2:10499676-10499695 | None:intergenic | 45.0% | |
CCAATACCACAAGTGATTGC+AGG | - | chr8_2:10499673-10499692 | Msa1233640:intron | 45.0% | |
! | GTTTGGCTCCAAGTGTTCTT+TGG | + | chr8_2:10500096-10500115 | None:intergenic | 45.0% |
AGAACACTTGGAGCCAAACA+TGG | - | chr8_2:10500097-10500116 | Msa1233640:intron | 45.0% | |
ACTTGGAGCCAAACATGGAT+GGG | - | chr8_2:10500102-10500121 | Msa1233640:intron | 45.0% | |
CAACAGCATATGCCTTTGCA+AGG | + | chr8_2:10500497-10500516 | None:intergenic | 45.0% | |
GATTGGGTATTCGCTGAAGA+AGG | - | chr8_2:10500867-10500886 | Msa1233640:intron | 45.0% | |
GACGATGATTCTTCCCTACA+TGG | - | chr8_2:10501220-10501239 | Msa1233640:intron | 45.0% | |
GAACTTGTAGAAGTGGGTCA+TGG | - | chr8_2:10501394-10501413 | Msa1233640:intron | 45.0% | |
ACTCTTGCACTACCCTCATA+TGG | - | chr8_2:10501470-10501489 | Msa1233640:intron | 45.0% | |
GTGCTGAAGCAATCCATATG+AGG | + | chr8_2:10501486-10501505 | None:intergenic | 45.0% | |
AACTCATGGGATCCTTTCTC+TGG | + | chr8_2:10501589-10501608 | None:intergenic | 45.0% | |
AGCGAGCTCCTTAAACTCAT+GGG | + | chr8_2:10501602-10501621 | None:intergenic | 45.0% | |
TAGCGAGCTCCTTAAACTCA+TGG | + | chr8_2:10501603-10501622 | None:intergenic | 45.0% | |
TGAGTTTAAGGAGCTCGCTA+AGG | - | chr8_2:10501603-10501622 | Msa1233640:intron | 45.0% | |
CACCTTCAGTTCTTTGTCCA+AGG | + | chr8_2:10501732-10501751 | None:intergenic | 45.0% | |
ACTATTGGGAATCCCTCTAC+CGG | + | chr8_2:10501929-10501948 | None:intergenic | 45.0% | |
!! | TATAAATAATCTTATAATTA+TGG | + | chr8_2:10494352-10494371 | None:intergenic | 5.0% |
!! | TATAAGATTATTTATAAAAA+CGG | - | chr8_2:10494356-10494375 | Msa1233640:CDS | 5.0% |
!!! | TAAAAGTATTTTTTTTTTTT+TGG | + | chr8_2:10495757-10495776 | None:intergenic | 5.0% |
!!! | ATTATTGTAATTTTATTTTT+TGG | - | chr8_2:10496114-10496133 | Msa1233640:intron | 5.0% |
!! | ATTATTAAAAAAATATATTG+AGG | - | chr8_2:10496297-10496316 | Msa1233640:intron | 5.0% |
!! | TAGAAAATAATAATAATATA+CGG | - | chr8_2:10497869-10497888 | Msa1233640:intron | 5.0% |
TTCTCAGGGAAAATGGGCAC+TGG | + | chr8_2:10495093-10495112 | None:intergenic | 50.0% | |
! | TGCCCATTTTCCCTGAGAAC+TGG | - | chr8_2:10495094-10495113 | Msa1233640:intron | 50.0% |
!! | GTTGTTTCTAGAACCGCGTC+AGG | - | chr8_2:10496805-10496824 | Msa1233640:CDS | 50.0% |
! | AAAGGCTTTGGCTGATAGGC+AGG | + | chr8_2:10496888-10496907 | None:intergenic | 50.0% |
! | GTGTTGCCGCTGTGATGTTT+TGG | + | chr8_2:10496985-10497004 | None:intergenic | 50.0% |
CACCATACCTGACATGGTTC+TGG | - | chr8_2:10497103-10497122 | Msa1233640:CDS | 50.0% | |
! | TGTTGCAAGGAGGATAGTGG+AGG | - | chr8_2:10497723-10497742 | Msa1233640:intron | 50.0% |
AGTGGAGGCTTAGTCACTGA+CGG | - | chr8_2:10497738-10497757 | Msa1233640:intron | 50.0% | |
AGGCTTAGTCACTGACGGAA+GGG | - | chr8_2:10497743-10497762 | Msa1233640:intron | 50.0% | |
TAGTCACTGACGGAAGGGTT+AGG | - | chr8_2:10497748-10497767 | Msa1233640:intron | 50.0% | |
AACGGGTGAGCGCAAAGAAT+GGG | - | chr8_2:10499093-10499112 | Msa1233640:intron | 50.0% | |
GTGAGCGCAAAGAATGGGAT+AGG | - | chr8_2:10499098-10499117 | Msa1233640:intron | 50.0% | |
! | CCAGACAAAGAGGCTGACTT+GGG | - | chr8_2:10499157-10499176 | Msa1233640:intron | 50.0% |
ACTTGGGTCGTCCAGTTCTT+GGG | - | chr8_2:10499173-10499192 | Msa1233640:intron | 50.0% | |
TCTTGGGGGATCAAGCACTT+TGG | - | chr8_2:10499189-10499208 | Msa1233640:intron | 50.0% | |
GATCTTACCCTTCGAGGGTA+AGG | + | chr8_2:10499229-10499248 | None:intergenic | 50.0% | |
TACCCTCGAAGGGTAAGATC+TGG | - | chr8_2:10499229-10499248 | Msa1233640:intron | 50.0% | |
CTACCAGATCTTACCCTTCG+AGG | + | chr8_2:10499235-10499254 | None:intergenic | 50.0% | |
TCCAAAGACTGAGAGTCGGA+AGG | - | chr8_2:10499441-10499460 | Msa1233640:intron | 50.0% | |
CCAAAGACTGAGAGTCGGAA+GGG | - | chr8_2:10499442-10499461 | Msa1233640:intron | 50.0% | |
TCATGCATGGATGGCTGATG+AGG | - | chr8_2:10499829-10499848 | Msa1233640:intron | 50.0% | |
CACTTGGAGCCAAACATGGA+TGG | - | chr8_2:10500101-10500120 | Msa1233640:intron | 50.0% | |
CTTGGAGCCAAACATGGATG+GGG | - | chr8_2:10500103-10500122 | Msa1233640:intron | 50.0% | |
ACTGTGACCCCATCCATGTT+TGG | + | chr8_2:10500113-10500132 | None:intergenic | 50.0% | |
GGATGGGGTCACAGTAAAAG+AGG | - | chr8_2:10500118-10500137 | Msa1233640:intron | 50.0% | |
GTCACCAACTTGTCAGCCAT+TGG | - | chr8_2:10500532-10500551 | Msa1233640:intron | 50.0% | |
CTCACCAATGGCTGACAAGT+TGG | + | chr8_2:10500539-10500558 | None:intergenic | 50.0% | |
CAGAAGACGCAGACCATGTA+GGG | + | chr8_2:10501236-10501255 | None:intergenic | 50.0% | |
TCAGAAGACGCAGACCATGT+AGG | + | chr8_2:10501237-10501256 | None:intergenic | 50.0% | |
TGGTCTGCGTCTTCTGATAG+AGG | - | chr8_2:10501240-10501259 | Msa1233640:intron | 50.0% | |
!! | TTGTAGGCTTCTACTGGCTC+TGG | + | chr8_2:10501772-10501791 | None:intergenic | 50.0% |
GAAACTTCACAGGCCCATAC+CGG | + | chr8_2:10501867-10501886 | None:intergenic | 50.0% | |
CTTTATCCTTCCAGTGGACC+AGG | - | chr8_2:10501898-10501917 | Msa1233640:intron | 50.0% | |
TGCTGCTGATCCTTCCATCC+CGG | - | chr8_2:10494239-10494258 | Msa1233640:three_prime_UTR | 55.0% | |
TGAAAGCCACAGAACGACCC+GGG | + | chr8_2:10494260-10494279 | None:intergenic | 55.0% | |
CTGAAAGCCACAGAACGACC+CGG | + | chr8_2:10494261-10494280 | None:intergenic | 55.0% | |
TCACGTTCGGGGTTGTGGAA+TGG | + | chr8_2:10496640-10496659 | None:intergenic | 55.0% | |
TGTTCTCACGTTCGGGGTTG+TGG | + | chr8_2:10496645-10496664 | None:intergenic | 55.0% | |
GAGGCTTAGTCACTGACGGA+AGG | - | chr8_2:10497742-10497761 | Msa1233640:intron | 55.0% | |
GAACGGGTGAGCGCAAAGAA+TGG | - | chr8_2:10499092-10499111 | Msa1233640:intron | 55.0% | |
GCCAGACAAAGAGGCTGACT+TGG | - | chr8_2:10499156-10499175 | Msa1233640:intron | 55.0% | |
CCCAAGTCAGCCTCTTTGTC+TGG | + | chr8_2:10499160-10499179 | None:intergenic | 55.0% | |
GACTTGGGTCGTCCAGTTCT+TGG | - | chr8_2:10499172-10499191 | Msa1233640:intron | 55.0% | |
CTTGGGTCGTCCAGTTCTTG+GGG | - | chr8_2:10499174-10499193 | Msa1233640:intron | 55.0% | |
TTGGGTCGTCCAGTTCTTGG+GGG | - | chr8_2:10499175-10499194 | Msa1233640:intron | 55.0% | |
GTGCTTGATCCCCCAAGAAC+TGG | + | chr8_2:10499187-10499206 | None:intergenic | 55.0% | |
TGGGGGATCAAGCACTTTGG+AGG | - | chr8_2:10499192-10499211 | Msa1233640:intron | 55.0% | |
GGGGGATCAAGCACTTTGGA+GGG | - | chr8_2:10499193-10499212 | Msa1233640:intron | 55.0% | |
CCCTTCCGACTCTCAGTCTT+TGG | + | chr8_2:10499445-10499464 | None:intergenic | 55.0% | |
GTCATCGTGCCACGATAGTG+TGG | + | chr8_2:10500741-10500760 | None:intergenic | 55.0% | |
GTCAATCCTGGTCCACTGGA+AGG | + | chr8_2:10501907-10501926 | None:intergenic | 55.0% | |
TCCAGTGGACCAGGATTGAC+CGG | - | chr8_2:10501907-10501926 | Msa1233640:intron | 55.0% | |
GACCAGGATTGACCGGTAGA+GGG | - | chr8_2:10501914-10501933 | Msa1233640:intron | 55.0% | |
ATCCCTCTACCGGTCAATCC+TGG | + | chr8_2:10501919-10501938 | None:intergenic | 55.0% | |
GCTGCTGATCCTTCCATCCC+GGG | - | chr8_2:10494240-10494259 | Msa1233640:three_prime_UTR | 60.0% | |
ACAGAACGACCCGGGATGGA+AGG | + | chr8_2:10494252-10494271 | None:intergenic | 60.0% | |
TTCCATCCCGGGTCGTTCTG+TGG | - | chr8_2:10494251-10494270 | Msa1233640:three_prime_UTR | 60.0% | |
AAGATGGGAGCTCCATCCCC+AGG | - | chr8_2:10498742-10498761 | Msa1233640:intron | 60.0% | |
AGATGGGAGCTCCATCCCCA+GGG | - | chr8_2:10498743-10498762 | Msa1233640:intron | 60.0% | |
ACCGGTCAATCCTGGTCCAC+TGG | + | chr8_2:10501911-10501930 | None:intergenic | 60.0% | |
GGACCAGGATTGACCGGTAG+AGG | - | chr8_2:10501913-10501932 | Msa1233640:intron | 60.0% | |
AGCCACAGAACGACCCGGGA+TGG | + | chr8_2:10494256-10494275 | None:intergenic | 65.0% | |
GATGGGAGCTCCATCCCCAG+GGG | - | chr8_2:10498744-10498763 | Msa1233640:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 10494153 | 10502114 | 10494153 | ID=Msa1233640;Name=Msa1233640 |
chr8_2 | mRNA | 10494153 | 10502114 | 10494153 | ID=Msa1233640-mRNA-1;Parent=Msa1233640;Name=Msa1233640-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.87|0.55|1|1|1|9|154|823 |
chr8_2 | exon | 10494153 | 10495060 | 10494153 | ID=Msa1233640-mRNA-1:exon:4152;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10495354 | 10495617 | 10495354 | ID=Msa1233640-mRNA-1:exon:4151;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10495714 | 10496027 | 10495714 | ID=Msa1233640-mRNA-1:exon:4150;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10496128 | 10496235 | 10496128 | ID=Msa1233640-mRNA-1:exon:4149;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10496360 | 10496445 | 10496360 | ID=Msa1233640-mRNA-1:exon:4148;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10496573 | 10496827 | 10496573 | ID=Msa1233640-mRNA-1:exon:4147;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10496996 | 10497251 | 10496996 | ID=Msa1233640-mRNA-1:exon:4146;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10497349 | 10497629 | 10497349 | ID=Msa1233640-mRNA-1:exon:4145;Parent=Msa1233640-mRNA-1 |
chr8_2 | exon | 10501961 | 10502114 | 10501961 | ID=Msa1233640-mRNA-1:exon:4144;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10501961 | 10502114 | 10501961 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10497349 | 10497629 | 10497349 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10496996 | 10497251 | 10496996 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10496573 | 10496827 | 10496573 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10496360 | 10496445 | 10496360 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10496128 | 10496235 | 10496128 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10495714 | 10496027 | 10495714 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10495354 | 10495617 | 10495354 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | CDS | 10494307 | 10495060 | 10494307 | ID=Msa1233640-mRNA-1:cds;Parent=Msa1233640-mRNA-1 |
chr8_2 | three_prime_UTR | 10494153 | 10494306 | 10494153 | ID=Msa1233640-mRNA-1:three_prime_utr;Parent=Msa1233640-mRNA-1 |
Gene Sequence |
Protein sequence |