AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297850 MtrunA17_Chr4g0065981 85.141 673 99 1 3 675 4 675 0.0 1215
Msa1297850 MtrunA17_Chr4g0065961 80.539 668 128 2 6 673 1 666 0.0 1130
Msa1297850 MtrunA17_Chr4g0065991 86.417 508 69 0 168 675 1 508 0.0 940
Msa1297850 MtrunA17_Chr1g0205571 56.994 672 284 3 6 673 1 671 0.0 819
Msa1297850 MtrunA17_Chr4g0023331 87.105 411 53 0 265 675 5 415 0.0 764
Msa1297850 MtrunA17_Chr1g0205541 47.432 662 332 5 2 660 10 658 0.0 653
Msa1297850 MtrunA17_Chr3g0119641 44.930 641 339 10 31 661 77 713 0.0 579
Msa1297850 MtrunA17_Chr4g0023321 70.943 265 73 4 1 264 1 262 9.03e-128 378
Msa1297850 MtrunA17_Chr3g0117081 26.973 697 438 19 17 660 58 736 3.57e-75 256
Msa1297850 MtrunA17_Chr5g0412801 28.093 687 414 23 32 660 44 708 1.24e-72 249
Msa1297850 MtrunA17_Chr8g0368011 27.255 499 295 17 32 481 82 561 8.21e-47 176
Msa1297850 MtrunA17_Chr8g0368021 37.795 127 77 2 544 668 37 163 3.81e-21 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297850 AT1G31710.1 52.535 651 300 7 31 673 27 676 0.0 710
Msa1297850 AT1G31690.1 52.705 647 300 6 32 673 27 672 0.0 709
Msa1297850 AT1G31670.1 50.300 666 304 10 17 673 89 736 0.0 670
Msa1297850 AT4G14940.1 46.248 653 336 6 14 660 6 649 0.0 629
Msa1297850 AT4G12290.1 44.065 674 339 16 23 673 76 734 0.0 584
Msa1297850 AT1G62810.1 42.638 652 361 10 31 673 59 706 0.0 556
Msa1297850 AT3G43670.1 43.192 639 350 10 31 660 40 674 0.0 554
Msa1297850 AT4G12290.2 42.599 608 317 14 23 610 76 671 2.15e-170 503
Msa1297850 AT4G12280.1 49.135 289 139 2 393 673 5 293 7.13e-99 305
Msa1297850 AT4G12270.1 37.056 394 211 13 23 390 78 460 5.73e-78 256
Msa1297850 AT2G42490.1 27.074 687 439 21 23 660 70 743 8.10e-72 248

Find 157 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAGATAGTAATTGATTTA+AGG 0.166639 8_3:+58427110 Msa1297850:CDS
TTCAGGTATACTGGAAATTA+AGG 0.179273 8_3:+58429938 Msa1297850:CDS
GAATACTCTTCTTTGGTTAA+AGG 0.191305 8_3:-58426905 None:intergenic
TTCTTTGATGTTGGCGAGTA+TGG 0.207924 8_3:+58428636 Msa1297850:CDS
AGTGCTTAATATTGGCATTA+TGG 0.226913 8_3:-58430642 None:intergenic
CGGATGAGAACACAGAATTT+AGG 0.259079 8_3:+58427473 Msa1297850:CDS
GTTCAAAGAGAAAGAGTTAT+TGG 0.263546 8_3:+58430141 Msa1297850:CDS
GACAAGAGAATACTCTTCTT+TGG 0.277511 8_3:-58426912 None:intergenic
TGTGACCCAAACATTATAAT+TGG 0.295340 8_3:-58430360 None:intergenic
TATCTTGACCTTGATATTGA+TGG 0.312207 8_3:+58430062 Msa1297850:CDS
ACAATTGTAATTCCAGTAAT+AGG 0.316826 8_3:-58427388 None:intergenic
GTGGCAAGACTGTGTTGTTT+AGG 0.333387 8_3:-58427523 None:intergenic
GGATGAGAACACAGAATTTA+GGG 0.335102 8_3:+58427474 Msa1297850:CDS
AGGAGTCTTACGAATTCATT+AGG 0.337269 8_3:-58428831 None:intergenic
AGATCAATGGCCACAGTGTT+AGG 0.341442 8_3:+58427572 Msa1297850:CDS
AGTTTGTTCTACTTTCACTA+TGG 0.342223 8_3:+58427282 Msa1297850:CDS
GTGCTTAATATTGGCATTAT+GGG 0.347461 8_3:-58430641 None:intergenic
ATATATGTTAGGCCTATTAC+TGG 0.351947 8_3:+58427376 Msa1297850:CDS
CTTGTAAGAAGGGGAGGGTC+AGG 0.359204 8_3:-58426838 None:intergenic
GAATGGTTTCCCAACGCTTT+CGG 0.361204 8_3:+58427168 Msa1297850:CDS
GAGAAGATACTTTAGCTGTT+TGG 0.371659 8_3:+58430438 Msa1297850:CDS
ATGGATTTAGCTGGGCAAAT+TGG 0.375010 8_3:+58428451 Msa1297850:intron
AATAGGCCTAACATATATAT+TGG 0.375065 8_3:-58427371 None:intergenic
TCAAAAGCAGTGCTTAATAT+TGG 0.375787 8_3:-58430650 None:intergenic
TATACATACCGCAGGTTTGA+TGG 0.383102 8_3:-58429193 None:intergenic
TGGCAAGACTGTGTTGTTTA+GGG 0.384366 8_3:-58427522 None:intergenic
CCCAGAGATGTTACATGGCC+TGG 0.384705 8_3:+58430725 Msa1297850:CDS
AGTATACAGATAGCACTTTC+AGG 0.386964 8_3:+58429921 Msa1297850:intron
AAAAGCTACTTTGTTCTTTG+AGG 0.389952 8_3:-58426963 None:intergenic
ATAACATTCTTCAAGAGAAT+CGG 0.396180 8_3:-58428753 None:intergenic
ACCAGGCCATGTAACATCTC+TGG 0.401042 8_3:-58430726 None:intergenic
GATAGCACTTTCAGGTATAC+TGG 0.401908 8_3:+58429929 Msa1297850:intron
ATTTGTGCATGACTGTTGTT+TGG 0.402615 8_3:-58426934 None:intergenic
AGTGGATGAGATGGAATTGC+TGG 0.403828 8_3:-58430296 None:intergenic
GAATGTATGTATCAATGAAC+TGG 0.407738 8_3:-58428713 None:intergenic
GATGTTGGCGAGTATGGATT+TGG 0.411471 8_3:+58428642 Msa1297850:CDS
ATTCCCTTTGTGAATATTGT+CGG 0.414089 8_3:-58427149 None:intergenic
GGAGAAAGTGTCTTAAGAAC+TGG 0.414331 8_3:-58430704 None:intergenic
TAACATTCTTCAAGAGAATC+GGG 0.421086 8_3:-58428752 None:intergenic
TTCACTATCGCAAGTTCACC+TGG 0.422431 8_3:-58430224 None:intergenic
TAAGCACAAGGATGAGGTTA+AGG 0.426190 8_3:+58429971 Msa1297850:CDS
CGAGGGATTGTTATAACACT+TGG 0.427479 8_3:-58427046 None:intergenic
GTTCATCAACCGAAAGCGTT+GGG 0.430526 8_3:-58427177 None:intergenic
TAACACTGTGGCCATTGATC+TGG 0.431893 8_3:-58427570 None:intergenic
AGCTGGAGTGATATTATCAT+TGG 0.439852 8_3:+58428500 Msa1297850:CDS
ATGGGAAAATCTTCTTGTGC+TGG 0.444846 8_3:-58430623 None:intergenic
CCGAAGTAAACTTGATAGTA+AGG 0.446212 8_3:+58429109 Msa1297850:CDS
CTATGACAACGTTGTAGATT+GGG 0.446410 8_3:+58429152 Msa1297850:CDS
GATTGTTATAACACTTGGTT+CGG 0.448572 8_3:-58427041 None:intergenic
ACTATGACAACGTTGTAGAT+TGG 0.450809 8_3:+58429151 Msa1297850:CDS
TCAGGTATACTGGAAATTAA+GGG 0.452813 8_3:+58429939 Msa1297850:CDS
GTTTGTTCTACTTTCACTAT+GGG 0.453362 8_3:+58427283 Msa1297850:CDS
AGCTACTTTGTTCTTTGAGG+TGG 0.453700 8_3:-58426960 None:intergenic
TTTAAGACTTTCTTTGATGT+TGG 0.457245 8_3:+58428627 Msa1297850:CDS
ATGTGGCGTCACACTGAAAC+CGG 0.458552 8_3:+58428804 Msa1297850:CDS
AAAACTCGTCTGATGGATCT+TGG 0.459489 8_3:-58428602 None:intergenic
TGTTGTTTGTTTATTGCATG+TGG 0.464169 8_3:+58430849 Msa1297850:three_prime_UTR
GTAAAAGCACCACGTATTTG+TGG 0.470697 8_3:-58430338 None:intergenic
TGGCCATTGATCTGGAAGCC+TGG 0.471032 8_3:-58427562 None:intergenic
TTCCTCTCGAAGAAATTAGT+TGG 0.487717 8_3:-58430680 None:intergenic
GACAATATTCACAAAGGGAA+TGG 0.489761 8_3:+58427151 Msa1297850:CDS
GCGGGTGTTGAAAATGCAAT+GGG 0.496765 8_3:-58426877 None:intergenic
TCAATGAACTGGGCATTTGA+TGG 0.497827 8_3:-58428702 None:intergenic
ACTTTCACTATGGGATGGTA+TGG 0.498654 8_3:+58427292 Msa1297850:CDS
TGTTTGTACCATCAATATCA+AGG 0.502446 8_3:-58430070 None:intergenic
GTTGTTTGTTTATTGCATGT+GGG 0.506445 8_3:+58430850 Msa1297850:three_prime_UTR
GCTACTTTGTTCTTTGAGGT+GGG 0.507842 8_3:-58426959 None:intergenic
TTAAATCAATTACTATCTCA+TGG 0.508058 8_3:-58427108 None:intergenic
TTAAAGTAAAACTCGTCTGA+TGG 0.510422 8_3:-58428609 None:intergenic
ATGGAATTGCTGGGATCAAA+CGG 0.516903 8_3:-58430286 None:intergenic
GTTCTACTTTCACTATGGGA+TGG 0.517842 8_3:+58427287 Msa1297850:CDS
ACACTGCCAATATATATGTT+AGG 0.519464 8_3:+58427365 Msa1297850:CDS
TTTGATGGACAATCACGGTT+GGG 0.521247 8_3:-58428687 None:intergenic
AGAAACTACGACTTGTAAGA+AGG 0.525041 8_3:-58426849 None:intergenic
ATGGAGAAGAGAAAAGTAGT+AGG 0.529413 8_3:+58427311 Msa1297850:CDS
CCTTACTATCAAGTTTACTT+CGG 0.531083 8_3:-58429109 None:intergenic
TCGTCTGATGGATCTTGGTA+TGG 0.531320 8_3:-58428597 None:intergenic
GGTCCAGGCTTCCAGATCAA+TGG 0.535158 8_3:+58427559 Msa1297850:CDS
CAAGATAGTAAATGTATAAG+TGG 0.535451 8_3:-58430046 None:intergenic
TCACATCAGAGCCAACCATT+CGG 0.540930 8_3:+58427499 Msa1297850:CDS
ATAGGATTTGATGTGCGAGC+TGG 0.541558 8_3:+58428483 Msa1297850:CDS
ATCTGGAAGCCTGGACCTTG+AGG 0.542953 8_3:-58427553 None:intergenic
TCAGTTAAAAGTGGATGAGA+TGG 0.543079 8_3:-58430305 None:intergenic
TAATCATCCTCAGTTAAAAG+TGG 0.547068 8_3:-58430314 None:intergenic
CTCGTCGTGTATTATACAAA+GGG 0.547283 8_3:+58428553 Msa1297850:CDS
ATCACAATTGGACTTGCCCC+AGG 0.548427 8_3:+58430206 Msa1297850:CDS
TCTCCGACAATATTCACAAA+GGG 0.549833 8_3:+58427146 Msa1297850:CDS
ACTCATCAACCTCAAGGTCC+AGG 0.550206 8_3:+58427544 Msa1297850:CDS
AGTAAATGTATAAGTGGTCG+TGG 0.551651 8_3:-58430040 None:intergenic
ATTTGATGGACAATCACGGT+TGG 0.552322 8_3:-58428688 None:intergenic
CCAGGCCATGTAACATCTCT+GGG 0.552849 8_3:-58430725 None:intergenic
CTCTATGTTGATCATAGCCA+TGG 0.553409 8_3:+58430416 Msa1297850:CDS
TGTTCATCAACCGAAAGCGT+TGG 0.554417 8_3:-58427178 None:intergenic
GTTGTTTAGGGCCGAATGGT+TGG 0.554904 8_3:-58427510 None:intergenic
AGCGGGTGTTGAAAATGCAA+TGG 0.558186 8_3:-58426878 None:intergenic
AGTAAGGAGTATAGTTACTG+TGG 0.558510 8_3:+58429125 Msa1297850:CDS
GAAACTACGACTTGTAAGAA+GGG 0.562882 8_3:-58426848 None:intergenic
TTCATTGATGCAATGAAAGG+AGG 0.563816 8_3:-58427232 None:intergenic
CGAGAAAACAAGTTTAAAGA+CGG 0.565335 8_3:+58430100 Msa1297850:CDS
AGTTATTGAAGCTGTGCCTA+CGG 0.569794 8_3:+58427453 Msa1297850:CDS
AAACATTAAGCACAAGGATG+AGG 0.570599 8_3:+58429965 Msa1297850:CDS
CAGCTAAAGTATCTTCTCCA+TGG 0.571385 8_3:-58430433 None:intergenic
TTTCTCCCAGAGATGTTACA+TGG 0.571991 8_3:+58430720 Msa1297850:CDS
CTACGACTTGTAAGAAGGGG+AGG 0.577079 8_3:-58426844 None:intergenic
GGAAGATCTACATGGTACCT+TGG 0.578264 8_3:+58429992 Msa1297850:CDS
TTGTAAGAAGGGGAGGGTCA+GGG 0.579097 8_3:-58426837 None:intergenic
GATTGGGAGTTCAAAACAAG+TGG 0.579254 8_3:+58429168 Msa1297850:CDS
ATGAACAAACCGTTGCGGTA+GGG 0.580671 8_3:+58427194 Msa1297850:CDS
TCTCGTCGTGTATTATACAA+AGG 0.581355 8_3:+58428552 Msa1297850:CDS
TTGGTGTCAGCAAACAGCAT+TGG 0.581742 8_3:+58430011 Msa1297850:CDS
GATGAACAAACCGTTGCGGT+AGG 0.589189 8_3:+58427193 Msa1297850:CDS
TAATGGAAGCCCTACCGCAA+CGG 0.589679 8_3:-58427203 None:intergenic
GGCCAACTAATTTCTTCGAG+AGG 0.591472 8_3:+58430678 Msa1297850:CDS
GTTTGTTTATTGCATGTGGG+AGG 0.591617 8_3:+58430853 Msa1297850:three_prime_UTR
CTGTGTTGTTTAGGGCCGAA+TGG 0.594102 8_3:-58427514 None:intergenic
ACATACATTCACTCTGCTGA+CGG 0.594247 8_3:+58428726 Msa1297850:CDS
TTTAGCAGTTTGAGTCTCAG+TGG 0.599729 8_3:-58430165 None:intergenic
AAGACGGTAAGAATCACTGA+TGG 0.608281 8_3:+58430116 Msa1297850:CDS
CTTGCCACTCATCAACCTCA+AGG 0.614169 8_3:+58427538 Msa1297850:CDS
TCACTATCGCAAGTTCACCT+GGG 0.614278 8_3:-58430223 None:intergenic
TACGAATTCATTAGGAACGC+CGG 0.617548 8_3:-58428823 None:intergenic
CATTAAGCAGTCTAACCTCA+CGG 0.620479 8_3:-58427335 None:intergenic
GAATAGAGACATTGTGAACA+AGG 0.621351 8_3:+58430562 Msa1297850:CDS
CTTTGGTTAAAGGATCAAGC+GGG 0.622516 8_3:-58426895 None:intergenic
GCAAATTGGAAGTTACACAT+AGG 0.624758 8_3:+58428465 Msa1297850:CDS
CATTGTGATGTGGCACGTAG+TGG 0.626360 8_3:+58430586 Msa1297850:CDS
GTCTCCGACAATATTCACAA+AGG 0.628735 8_3:+58427145 Msa1297850:CDS
ATTGATGATAGCAATGACAA+AGG 0.629492 8_3:-58427074 None:intergenic
GTAAGGAGTATAGTTACTGT+GGG 0.630670 8_3:+58429126 Msa1297850:CDS
AACAATATAACAATATCATG+TGG 0.638012 8_3:+58428787 Msa1297850:CDS
GGGCATTTGATGGACAATCA+CGG 0.638441 8_3:-58428692 None:intergenic
CACTATCGCAAGTTCACCTG+GGG 0.641841 8_3:-58430222 None:intergenic
ACAGCGGTCGGAAACGACGT+CGG 0.644560 8_3:+58430260 Msa1297850:CDS
AATTCTGTGTTCTCATCCGT+AGG 0.646497 8_3:-58427469 None:intergenic
AAACTACGACTTGTAAGAAG+GGG 0.651987 8_3:-58426847 None:intergenic
GGGAACAAACATTAAGCACA+AGG 0.652766 8_3:+58429959 Msa1297850:CDS
TCTTTGGTTAAAGGATCAAG+CGG 0.653437 8_3:-58426896 None:intergenic
GTGGATGAGATGGAATTGCT+GGG 0.655196 8_3:-58430295 None:intergenic
AATGCTGTTTGCTGACACCA+AGG 0.662444 8_3:-58430009 None:intergenic
GCAATGACAAAGGCTTTACG+AGG 0.670561 8_3:-58427064 None:intergenic
TACGACTTGTAAGAAGGGGA+GGG 0.672644 8_3:-58426843 None:intergenic
AGAAAAGTAGTAGGACCGTG+AGG 0.677701 8_3:+58427320 Msa1297850:CDS
GAGGTTAAGGAAGATCTACA+TGG 0.682090 8_3:+58429984 Msa1297850:CDS
CAATGACAAAGGCTTTACGA+GGG 0.683483 8_3:-58427063 None:intergenic
AACATTCTTCAAGAGAATCG+GGG 0.685411 8_3:-58428751 None:intergenic
ATTGTGATGTGGCACGTAGT+GGG 0.689785 8_3:+58430587 Msa1297850:CDS
GAGAGGATTGAATCTCTCTG+AGG 0.693702 8_3:+58427258 Msa1297850:CDS
AAGTGGTTCCATCAAACCTG+CGG 0.705775 8_3:+58429185 Msa1297850:CDS
TCTTTCACAAAAGAACAATG+TGG 0.710266 8_3:-58430818 None:intergenic
AATGTATGTATCAATGAACT+GGG 0.711985 8_3:-58428712 None:intergenic
ACAAGCTATAGAGCTCACAA+TGG 0.714049 8_3:+58426781 None:intergenic
AAATGCATTACCTAACACTG+TGG 0.720465 8_3:-58427582 None:intergenic
TGAACAAGGACATTGTGATG+TGG 0.731915 8_3:+58430576 Msa1297850:CDS
GGTTGATGAACAAACCGTTG+CGG 0.744903 8_3:+58427189 Msa1297850:CDS
TGGACCTTGAGGTTGATGAG+TGG 0.755738 8_3:-58427542 None:intergenic
GATGATTATCCACAAATACG+TGG 0.767802 8_3:+58430329 Msa1297850:CDS
CGGGTGTTGAAAATGCAATG+GGG 0.795860 8_3:-58426876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCATTTATTTATTTATTTTT+TGG + chr8_3:58427599-58427618 Msa1297850:intron 10.0%
!! ACTAGTATTATTATTTATTA+GGG - chr8_3:58427766-58427785 None:intergenic 10.0%
!! TACTAGTATTATTATTTATT+AGG - chr8_3:58427767-58427786 None:intergenic 10.0%
!!! GTTTAAAAATAACTTTAAAA+TGG + chr8_3:58428299-58428318 Msa1297850:intron 10.0%
!!! ATTTAATTTTTTTATTGACT+TGG + chr8_3:58428382-58428401 Msa1297850:intron 10.0%
!! AGCTATTATATATTTATTTA+TGG + chr8_3:58428432-58428451 Msa1297850:intron 10.0%
!!! AACTAAATATTTTTAATTTG+AGG - chr8_3:58429474-58429493 None:intergenic 10.0%
!!! AAATATTTAGTTTCTTTTTT+AGG + chr8_3:58429482-58429501 Msa1297850:intron 10.0%
!! GTTTCAATATTATTATTATA+TGG + chr8_3:58429898-58429917 Msa1297850:intron 10.0%
!!! TAATAATTAATCATACTTTT+TGG - chr8_3:58430465-58430484 None:intergenic 10.0%
!! AAAAAAATGATATTCTCAAA+TGG + chr8_3:58427011-58427030 Msa1297850:CDS 15.0%
!! AAAAAATGATATTCTCAAAT+GGG + chr8_3:58427012-58427031 Msa1297850:CDS 15.0%
!!! ATTTATTTTTTGGATACATT+TGG + chr8_3:58427609-58427628 Msa1297850:intron 15.0%
!!! TAAAAATAACTTTAAAATGG+TGG + chr8_3:58428302-58428321 Msa1297850:intron 15.0%
!! CAATAAAAAAATTAAATCAC+AGG - chr8_3:58428379-58428398 None:intergenic 15.0%
!! AATAATATTCAAACTATAGA+TGG - chr8_3:58429238-58429257 None:intergenic 15.0%
!!! ATTTTAGTTCTTTTCAATTA+TGG + chr8_3:58429263-58429282 Msa1297850:intron 15.0%
!!! CATGATAAATTTATAGTTTT+TGG - chr8_3:58429626-58429645 None:intergenic 15.0%
!! AATATTGAAACATTATCAAT+TGG - chr8_3:58429889-58429908 None:intergenic 15.0%
!!! TTTTACCAATTATAATGTTT+GGG + chr8_3:58430355-58430374 Msa1297850:CDS 15.0%
!! TTATAATAGAACTGAAAAAT+GGG + chr8_3:58430385-58430404 Msa1297850:CDS 15.0%
!!! TAGTTGATTTATTTTTACTT+GGG - chr8_3:58430755-58430774 None:intergenic 15.0%
!!! TAAGAAAAGCGTAAATTTTA+TGG - chr8_3:58426816-58426835 None:intergenic 20.0%
!!! TGAGAATATCATTTTTTTCA+GGG - chr8_3:58427009-58427028 None:intergenic 20.0%
!!! TTGAGAATATCATTTTTTTC+AGG - chr8_3:58427010-58427029 None:intergenic 20.0%
!! TTAAATCAATTACTATCTCA+TGG - chr8_3:58427111-58427130 None:intergenic 20.0%
!!! ATGAGATAGTAATTGATTTA+AGG + chr8_3:58427110-58427129 Msa1297850:CDS 20.0%
!!! ATAAATTTTCTATGAAGTGT+TGG - chr8_3:58427714-58427733 None:intergenic 20.0%
!! TTTGTCTAATGAGTAAAAAA+GGG - chr8_3:58428066-58428085 None:intergenic 20.0%
!!! TTTTTTACTCATTAGACAAA+GGG + chr8_3:58428066-58428085 Msa1297850:intron 20.0%
!! TATTTATTTATGGATTTAGC+TGG + chr8_3:58428442-58428461 Msa1297850:intron 20.0%
!! ATTTATTTATGGATTTAGCT+GGG + chr8_3:58428443-58428462 Msa1297850:intron 20.0%
!! AACAATATAACAATATCATG+TGG + chr8_3:58428787-58428806 Msa1297850:CDS 20.0%
!! AATATAATCCCATGTAATTA+AGG - chr8_3:58428854-58428873 None:intergenic 20.0%
!! TGTATAGTTTCAACAAAAAA+TGG + chr8_3:58429210-58429229 Msa1297850:intron 20.0%
!!! AGATTTTCTTTCAATAAAAG+TGG - chr8_3:58429602-58429621 None:intergenic 20.0%
!! TTACTCCATTATATTAAAGT+GGG - chr8_3:58429710-58429729 None:intergenic 20.0%
!!! CTTTTACCAATTATAATGTT+TGG + chr8_3:58430354-58430373 Msa1297850:CDS 20.0%
!!! CATTTTTCAGTTCTATTATA+AGG - chr8_3:58430386-58430405 None:intergenic 20.0%
!! CTTATAATAGAACTGAAAAA+TGG + chr8_3:58430384-58430403 Msa1297850:CDS 20.0%
!!! AGTTGATTTATTTTTACTTG+GGG - chr8_3:58430754-58430773 None:intergenic 20.0%
!!! CTAGTTGATTTATTTTTACT+TGG - chr8_3:58430756-58430775 None:intergenic 20.0%
!! AAAGTAGCTTTTCACTATAT+TGG + chr8_3:58426974-58426993 Msa1297850:CDS 25.0%
!!! ATGAAAGGAGGATATTTTAA+TGG - chr8_3:58427223-58427242 None:intergenic 25.0%
!! TTTTTCATTGATGCAATGAA+AGG - chr8_3:58427238-58427257 None:intergenic 25.0%
! AATAGGCCTAACATATATAT+TGG - chr8_3:58427374-58427393 None:intergenic 25.0%
! ACAATTGTAATTCCAGTAAT+AGG - chr8_3:58427391-58427410 None:intergenic 25.0%
!!! TATTTTTTGGATACATTTGG+TGG + chr8_3:58427612-58427631 Msa1297850:intron 25.0%
!!! ATTTTTTGGATACATTTGGT+GGG + chr8_3:58427613-58427632 Msa1297850:intron 25.0%
! AATTTAGAAAAATAACACCG+TGG + chr8_3:58427652-58427671 Msa1297850:intron 25.0%
!!! TTTTTATTTGTTGTCAACCA+CGG - chr8_3:58427672-58427691 None:intergenic 25.0%
! CTTTGTCTAATGAGTAAAAA+AGG - chr8_3:58428067-58428086 None:intergenic 25.0%
!!! CTTTTTTACTCATTAGACAA+AGG + chr8_3:58428065-58428084 Msa1297850:intron 25.0%
!!! CTCTATTAGAAGAGTTTTAA+TGG + chr8_3:58428207-58428226 Msa1297850:intron 25.0%
!! TTTTAATGGAGATGAATTAC+AGG + chr8_3:58428221-58428240 Msa1297850:intron 25.0%
! GTTTACATGATATTATCATG+AGG - chr8_3:58428263-58428282 None:intergenic 25.0%
!!! TTTTTTTATTGACTTGGACA+TGG + chr8_3:58428388-58428407 Msa1297850:intron 25.0%
!! TTTAAGACTTTCTTTGATGT+TGG + chr8_3:58428627-58428646 Msa1297850:CDS 25.0%
! AATGTATGTATCAATGAACT+GGG - chr8_3:58428715-58428734 None:intergenic 25.0%
! ATAACATTCTTCAAGAGAAT+CGG - chr8_3:58428756-58428775 None:intergenic 25.0%
! TGTCAATTAATTACAACTGT+TGG + chr8_3:58428873-58428892 Msa1297850:intron 25.0%
!!! TACTAGTATGTTTTTTCTTG+TGG + chr8_3:58429288-58429307 Msa1297850:intron 25.0%
!! TGATGAGATTAACTTTTATG+CGG + chr8_3:58429333-58429352 Msa1297850:intron 25.0%
! AGGTCATTTAAATGCTTAAT+TGG + chr8_3:58429660-58429679 Msa1297850:intron 25.0%
! GTTACTCCATTATATTAAAG+TGG - chr8_3:58429711-58429730 None:intergenic 25.0%
!! CTTTAATATAATGGAGTAAC+TGG + chr8_3:58429711-58429730 Msa1297850:intron 25.0%
!! TTTTAACATCAAAGAGTCTT+TGG + chr8_3:58429757-58429776 Msa1297850:intron 25.0%
! CAAGATAGTAAATGTATAAG+TGG - chr8_3:58430049-58430068 None:intergenic 25.0%
!! GAAAAGCGTAAATTTTATGG+TGG - chr8_3:58426813-58426832 None:intergenic 30.0%
GAATACTCTTCTTTGGTTAA+AGG - chr8_3:58426908-58426927 None:intergenic 30.0%
! AAAAGCTACTTTGTTCTTTG+AGG - chr8_3:58426966-58426985 None:intergenic 30.0%
GATTGTTATAACACTTGGTT+CGG - chr8_3:58427044-58427063 None:intergenic 30.0%
! ATTGATGATAGCAATGACAA+AGG - chr8_3:58427077-58427096 None:intergenic 30.0%
ATTCCCTTTGTGAATATTGT+CGG - chr8_3:58427152-58427171 None:intergenic 30.0%
ATTGCATCAATGAAAAAGAG+AGG + chr8_3:58427241-58427260 Msa1297850:CDS 30.0%
! AGTTTGTTCTACTTTCACTA+TGG + chr8_3:58427282-58427301 Msa1297850:CDS 30.0%
GTTTGTTCTACTTTCACTAT+GGG + chr8_3:58427283-58427302 Msa1297850:CDS 30.0%
ACACTGCCAATATATATGTT+AGG + chr8_3:58427365-58427384 Msa1297850:CDS 30.0%
ATATATGTTAGGCCTATTAC+TGG + chr8_3:58427376-58427395 Msa1297850:CDS 30.0%
AAAAGTCAAATTGTACCCAA+AGG + chr8_3:58428011-58428030 Msa1297850:intron 30.0%
TACCCAAAGGATTTAAATGA+AGG + chr8_3:58428024-58428043 Msa1297850:intron 30.0%
ACCCAAAGGATTTAAATGAA+GGG + chr8_3:58428025-58428044 Msa1297850:intron 30.0%
ACCCTTCATTTAAATCCTTT+GGG - chr8_3:58428029-58428048 None:intergenic 30.0%
TTAAAGTAAAACTCGTCTGA+TGG - chr8_3:58428612-58428631 None:intergenic 30.0%
GAATGTATGTATCAATGAAC+TGG - chr8_3:58428716-58428735 None:intergenic 30.0%
TAACATTCTTCAAGAGAATC+GGG - chr8_3:58428755-58428774 None:intergenic 30.0%
GTAAGACTCCTTAATTACAT+GGG + chr8_3:58428843-58428862 Msa1297850:intron 30.0%
CCTTACTATCAAGTTTACTT+CGG - chr8_3:58429112-58429131 None:intergenic 30.0%
! TTTTCTTGTGGTATGAATGA+TGG + chr8_3:58429300-58429319 Msa1297850:intron 30.0%
TTTCTTGTGGTATGAATGAT+GGG + chr8_3:58429301-58429320 Msa1297850:intron 30.0%
!!! GTATGAATGATGGGTTTTTT+AGG + chr8_3:58429310-58429329 Msa1297850:intron 30.0%
TAGCTCCCACTTTAATATAA+TGG + chr8_3:58429702-58429721 Msa1297850:intron 30.0%
AATATAAAGCATGTGTCTCA+CGG - chr8_3:58429738-58429757 None:intergenic 30.0%
ATATTGGGTTACTTATGTCT+TGG - chr8_3:58429820-58429839 None:intergenic 30.0%
AACCACGTGTTAAACATATT+GGG - chr8_3:58429835-58429854 None:intergenic 30.0%
AAACCACGTGTTAAACATAT+TGG - chr8_3:58429836-58429855 None:intergenic 30.0%
TTCAGGTATACTGGAAATTA+AGG + chr8_3:58429938-58429957 Msa1297850:CDS 30.0%
TCAGGTATACTGGAAATTAA+GGG + chr8_3:58429939-58429958 Msa1297850:CDS 30.0%
TATCTTGACCTTGATATTGA+TGG + chr8_3:58430062-58430081 Msa1297850:CDS 30.0%
TGTTTGTACCATCAATATCA+AGG - chr8_3:58430073-58430092 None:intergenic 30.0%
CGAGAAAACAAGTTTAAAGA+CGG + chr8_3:58430100-58430119 Msa1297850:CDS 30.0%
GTTCAAAGAGAAAGAGTTAT+TGG + chr8_3:58430141-58430160 Msa1297850:CDS 30.0%
TCAGATGCAAAAATCACAAT+TGG + chr8_3:58430194-58430213 Msa1297850:CDS 30.0%
GAATCCAAACAAAAAAACAG+CGG + chr8_3:58430244-58430263 Msa1297850:CDS 30.0%
TAATCATCCTCAGTTAAAAG+TGG - chr8_3:58430317-58430336 None:intergenic 30.0%
TGTGACCCAAACATTATAAT+TGG - chr8_3:58430363-58430382 None:intergenic 30.0%
ATTAAAATGTACGTTTGCAC+AGG + chr8_3:58430540-58430559 Msa1297850:intron 30.0%
GTGCTTAATATTGGCATTAT+GGG - chr8_3:58430644-58430663 None:intergenic 30.0%
AGTGCTTAATATTGGCATTA+TGG - chr8_3:58430645-58430664 None:intergenic 30.0%
TCAAAAGCAGTGCTTAATAT+TGG - chr8_3:58430653-58430672 None:intergenic 30.0%
TCTTTCACAAAAGAACAATG+TGG - chr8_3:58430821-58430840 None:intergenic 30.0%
! TGTTGTTTGTTTATTGCATG+TGG + chr8_3:58430849-58430868 Msa1297850:three_prime_UTR 30.0%
GTTGTTTGTTTATTGCATGT+GGG + chr8_3:58430850-58430869 Msa1297850:three_prime_UTR 30.0%
! AAGCGTAAATTTTATGGTGG+TGG - chr8_3:58426810-58426829 None:intergenic 35.0%
AAACTACGACTTGTAAGAAG+GGG - chr8_3:58426850-58426869 None:intergenic 35.0%
GAAACTACGACTTGTAAGAA+GGG - chr8_3:58426851-58426870 None:intergenic 35.0%
AGAAACTACGACTTGTAAGA+AGG - chr8_3:58426852-58426871 None:intergenic 35.0%
TCTTTGGTTAAAGGATCAAG+CGG - chr8_3:58426899-58426918 None:intergenic 35.0%
GACAAGAGAATACTCTTCTT+TGG - chr8_3:58426915-58426934 None:intergenic 35.0%
ATTTGTGCATGACTGTTGTT+TGG - chr8_3:58426937-58426956 None:intergenic 35.0%
TCTCCGACAATATTCACAAA+GGG + chr8_3:58427146-58427165 Msa1297850:CDS 35.0%
GACAATATTCACAAAGGGAA+TGG + chr8_3:58427151-58427170 Msa1297850:CDS 35.0%
TTCATTGATGCAATGAAAGG+AGG - chr8_3:58427235-58427254 None:intergenic 35.0%
ATGGAGAAGAGAAAAGTAGT+AGG + chr8_3:58427311-58427330 Msa1297850:CDS 35.0%
GGATGAGAACACAGAATTTA+GGG + chr8_3:58427474-58427493 Msa1297850:CDS 35.0%
AAATGCATTACCTAACACTG+TGG - chr8_3:58427585-58427604 None:intergenic 35.0%
CACCCTTCATTTAAATCCTT+TGG - chr8_3:58428030-58428049 None:intergenic 35.0%
!! TTAAAATGGTGGATGTCATC+AGG + chr8_3:58428313-58428332 Msa1297850:intron 35.0%
GCAAATTGGAAGTTACACAT+AGG + chr8_3:58428465-58428484 Msa1297850:CDS 35.0%
AGCTGGAGTGATATTATCAT+TGG + chr8_3:58428500-58428519 Msa1297850:CDS 35.0%
TCTCGTCGTGTATTATACAA+AGG + chr8_3:58428552-58428571 Msa1297850:CDS 35.0%
CTCGTCGTGTATTATACAAA+GGG + chr8_3:58428553-58428572 Msa1297850:CDS 35.0%
AACATTCTTCAAGAGAATCG+GGG - chr8_3:58428754-58428773 None:intergenic 35.0%
AGGAGTCTTACGAATTCATT+AGG - chr8_3:58428834-58428853 None:intergenic 35.0%
CGTAAGACTCCTTAATTACA+TGG + chr8_3:58428842-58428861 Msa1297850:intron 35.0%
! CCGAAGTAAACTTGATAGTA+AGG + chr8_3:58429109-58429128 Msa1297850:CDS 35.0%
! AGTAAGGAGTATAGTTACTG+TGG + chr8_3:58429125-58429144 Msa1297850:CDS 35.0%
! GTAAGGAGTATAGTTACTGT+GGG + chr8_3:58429126-58429145 Msa1297850:CDS 35.0%
ACTATGACAACGTTGTAGAT+TGG + chr8_3:58429151-58429170 Msa1297850:CDS 35.0%
CTATGACAACGTTGTAGATT+GGG + chr8_3:58429152-58429171 Msa1297850:CDS 35.0%
CATCATGAACTTAGCTTAGT+TGG + chr8_3:58429396-58429415 Msa1297850:intron 35.0%
AACCCAATATGTTTAACACG+TGG + chr8_3:58429830-58429849 Msa1297850:intron 35.0%
AGTATACAGATAGCACTTTC+AGG + chr8_3:58429921-58429940 Msa1297850:intron 35.0%
AAACATTAAGCACAAGGATG+AGG + chr8_3:58429965-58429984 Msa1297850:CDS 35.0%
AGTAAATGTATAAGTGGTCG+TGG - chr8_3:58430043-58430062 None:intergenic 35.0%
TCAGTTAAAAGTGGATGAGA+TGG - chr8_3:58430308-58430327 None:intergenic 35.0%
!! ATCTCATCCACTTTTAACTG+AGG + chr8_3:58430307-58430326 Msa1297850:CDS 35.0%
GATGATTATCCACAAATACG+TGG + chr8_3:58430329-58430348 Msa1297850:CDS 35.0%
AATAGAACTGAAAAATGGGC+TGG + chr8_3:58430389-58430408 Msa1297850:CDS 35.0%
GAGAAGATACTTTAGCTGTT+TGG + chr8_3:58430438-58430457 Msa1297850:CDS 35.0%
GAATAGAGACATTGTGAACA+AGG + chr8_3:58430562-58430581 Msa1297850:CDS 35.0%
TTCCTCTCGAAGAAATTAGT+TGG - chr8_3:58430683-58430702 None:intergenic 35.0%
CTTTGGTTAAAGGATCAAGC+GGG - chr8_3:58426898-58426917 None:intergenic 40.0%
!! GCTACTTTGTTCTTTGAGGT+GGG - chr8_3:58426962-58426981 None:intergenic 40.0%
! AGCTACTTTGTTCTTTGAGG+TGG - chr8_3:58426963-58426982 None:intergenic 40.0%
CGAGGGATTGTTATAACACT+TGG - chr8_3:58427049-58427068 None:intergenic 40.0%
CAATGACAAAGGCTTTACGA+GGG - chr8_3:58427066-58427085 None:intergenic 40.0%
GTCTCCGACAATATTCACAA+AGG + chr8_3:58427145-58427164 Msa1297850:CDS 40.0%
GTTCTACTTTCACTATGGGA+TGG + chr8_3:58427287-58427306 Msa1297850:CDS 40.0%
ACTTTCACTATGGGATGGTA+TGG + chr8_3:58427292-58427311 Msa1297850:CDS 40.0%
CATTAAGCAGTCTAACCTCA+CGG - chr8_3:58427338-58427357 None:intergenic 40.0%
AGTTATTGAAGCTGTGCCTA+CGG + chr8_3:58427453-58427472 Msa1297850:CDS 40.0%
AATTCTGTGTTCTCATCCGT+AGG - chr8_3:58427472-58427491 None:intergenic 40.0%
CGGATGAGAACACAGAATTT+AGG + chr8_3:58427473-58427492 Msa1297850:CDS 40.0%
!! TGGCAAGACTGTGTTGTTTA+GGG - chr8_3:58427525-58427544 None:intergenic 40.0%
ATGGATTTAGCTGGGCAAAT+TGG + chr8_3:58428451-58428470 Msa1297850:intron 40.0%
! AAAACTCGTCTGATGGATCT+TGG - chr8_3:58428605-58428624 None:intergenic 40.0%
TTCTTTGATGTTGGCGAGTA+TGG + chr8_3:58428636-58428655 Msa1297850:CDS 40.0%
! TTTGATGGACAATCACGGTT+GGG - chr8_3:58428690-58428709 None:intergenic 40.0%
! ATTTGATGGACAATCACGGT+TGG - chr8_3:58428691-58428710 None:intergenic 40.0%
TCAATGAACTGGGCATTTGA+TGG - chr8_3:58428705-58428724 None:intergenic 40.0%
ACATACATTCACTCTGCTGA+CGG + chr8_3:58428726-58428745 Msa1297850:CDS 40.0%
TACGAATTCATTAGGAACGC+CGG - chr8_3:58428826-58428845 None:intergenic 40.0%
GATTGGGAGTTCAAAACAAG+TGG + chr8_3:58429168-58429187 Msa1297850:CDS 40.0%
TATACATACCGCAGGTTTGA+TGG - chr8_3:58429196-58429215 None:intergenic 40.0%
GTTGAAACTATACATACCGC+AGG - chr8_3:58429204-58429223 None:intergenic 40.0%
GTAATCAAAGCACGCTATAG+AGG + chr8_3:58429431-58429450 Msa1297850:intron 40.0%
AGCATTTAAATGACCTGCGT+GGG - chr8_3:58429656-58429675 None:intergenic 40.0%
AAGCATTTAAATGACCTGCG+TGG - chr8_3:58429657-58429676 None:intergenic 40.0%
! GATAGCACTTTCAGGTATAC+TGG + chr8_3:58429929-58429948 Msa1297850:intron 40.0%
GGGAACAAACATTAAGCACA+AGG + chr8_3:58429959-58429978 Msa1297850:CDS 40.0%
TAAGCACAAGGATGAGGTTA+AGG + chr8_3:58429971-58429990 Msa1297850:CDS 40.0%
GAGGTTAAGGAAGATCTACA+TGG + chr8_3:58429984-58430003 Msa1297850:CDS 40.0%
AAGACGGTAAGAATCACTGA+TGG + chr8_3:58430116-58430135 Msa1297850:CDS 40.0%
TTTAGCAGTTTGAGTCTCAG+TGG - chr8_3:58430168-58430187 None:intergenic 40.0%
CCAAACAAAAAAACAGCGGT+CGG + chr8_3:58430248-58430267 Msa1297850:CDS 40.0%
ATGGAATTGCTGGGATCAAA+CGG - chr8_3:58430289-58430308 None:intergenic 40.0%
!! GTAAAAGCACCACGTATTTG+TGG - chr8_3:58430341-58430360 None:intergenic 40.0%
CTCTATGTTGATCATAGCCA+TGG + chr8_3:58430416-58430435 Msa1297850:CDS 40.0%
! CAGCTAAAGTATCTTCTCCA+TGG - chr8_3:58430436-58430455 None:intergenic 40.0%
TGAACAAGGACATTGTGATG+TGG + chr8_3:58430576-58430595 Msa1297850:CDS 40.0%
ATGGGAAAATCTTCTTGTGC+TGG - chr8_3:58430626-58430645 None:intergenic 40.0%
!! GGAGAAAGTGTCTTAAGAAC+TGG - chr8_3:58430707-58430726 None:intergenic 40.0%
TTTCTCCCAGAGATGTTACA+TGG + chr8_3:58430720-58430739 Msa1297850:CDS 40.0%
!! TATTTTTACTTGGGGCAACC+AGG - chr8_3:58430746-58430765 None:intergenic 40.0%
GTTTGTTTATTGCATGTGGG+AGG + chr8_3:58430853-58430872 Msa1297850:three_prime_UTR 40.0%
TACGACTTGTAAGAAGGGGA+GGG - chr8_3:58426846-58426865 None:intergenic 45.0%
!! CGGGTGTTGAAAATGCAATG+GGG - chr8_3:58426879-58426898 None:intergenic 45.0%
!! GCGGGTGTTGAAAATGCAAT+GGG - chr8_3:58426880-58426899 None:intergenic 45.0%
!! AGCGGGTGTTGAAAATGCAA+TGG - chr8_3:58426881-58426900 None:intergenic 45.0%
GCAATGACAAAGGCTTTACG+AGG - chr8_3:58427067-58427086 None:intergenic 45.0%
GAATGGTTTCCCAACGCTTT+CGG + chr8_3:58427168-58427187 Msa1297850:CDS 45.0%
!! GTTCATCAACCGAAAGCGTT+GGG - chr8_3:58427180-58427199 None:intergenic 45.0%
! TGTTCATCAACCGAAAGCGT+TGG - chr8_3:58427181-58427200 None:intergenic 45.0%
!! GGTTGATGAACAAACCGTTG+CGG + chr8_3:58427189-58427208 Msa1297850:CDS 45.0%
ATGAACAAACCGTTGCGGTA+GGG + chr8_3:58427194-58427213 Msa1297850:CDS 45.0%
GAGAGGATTGAATCTCTCTG+AGG + chr8_3:58427258-58427277 Msa1297850:CDS 45.0%
AGAAAAGTAGTAGGACCGTG+AGG + chr8_3:58427320-58427339 Msa1297850:CDS 45.0%
TCACATCAGAGCCAACCATT+CGG + chr8_3:58427499-58427518 Msa1297850:CDS 45.0%
!! GTGGCAAGACTGTGTTGTTT+AGG - chr8_3:58427526-58427545 None:intergenic 45.0%
TAACACTGTGGCCATTGATC+TGG - chr8_3:58427573-58427592 None:intergenic 45.0%
AGATCAATGGCCACAGTGTT+AGG + chr8_3:58427572-58427591 Msa1297850:CDS 45.0%
ATAGGATTTGATGTGCGAGC+TGG + chr8_3:58428483-58428502 Msa1297850:CDS 45.0%
! TCGTCTGATGGATCTTGGTA+TGG - chr8_3:58428600-58428619 None:intergenic 45.0%
GATGTTGGCGAGTATGGATT+TGG + chr8_3:58428642-58428661 Msa1297850:CDS 45.0%
! GGGCATTTGATGGACAATCA+CGG - chr8_3:58428695-58428714 None:intergenic 45.0%
AAGTGGTTCCATCAAACCTG+CGG + chr8_3:58429185-58429204 Msa1297850:CDS 45.0%
TTTAAATGACCTGCGTGGGT+GGG - chr8_3:58429652-58429671 None:intergenic 45.0%
ATTTAAATGACCTGCGTGGG+TGG - chr8_3:58429653-58429672 None:intergenic 45.0%
GGAAGATCTACATGGTACCT+TGG + chr8_3:58429992-58430011 Msa1297850:CDS 45.0%
! AATGCTGTTTGCTGACACCA+AGG - chr8_3:58430012-58430031 None:intergenic 45.0%
!! TTGGTGTCAGCAAACAGCAT+TGG + chr8_3:58430011-58430030 Msa1297850:CDS 45.0%
TCACTATCGCAAGTTCACCT+GGG - chr8_3:58430226-58430245 None:intergenic 45.0%
TTCACTATCGCAAGTTCACC+TGG - chr8_3:58430227-58430246 None:intergenic 45.0%
!!! CCGACCGCTGTTTTTTTGTT+TGG - chr8_3:58430251-58430270 None:intergenic 45.0%
GTGGATGAGATGGAATTGCT+GGG - chr8_3:58430298-58430317 None:intergenic 45.0%
AGTGGATGAGATGGAATTGC+TGG - chr8_3:58430299-58430318 None:intergenic 45.0%
!! AGAACTGAAAAATGGGCTGG+TGG + chr8_3:58430392-58430411 Msa1297850:CDS 45.0%
ATTGTGATGTGGCACGTAGT+GGG + chr8_3:58430587-58430606 Msa1297850:CDS 45.0%
!! TAAGCACTGCTTTTGAGCTG+AGG + chr8_3:58430657-58430676 Msa1297850:CDS 45.0%
GGCCAACTAATTTCTTCGAG+AGG + chr8_3:58430678-58430697 Msa1297850:CDS 45.0%
TTGTAAGAAGGGGAGGGTCA+GGG - chr8_3:58426840-58426859 None:intergenic 50.0%
CTACGACTTGTAAGAAGGGG+AGG - chr8_3:58426847-58426866 None:intergenic 50.0%
GATGAACAAACCGTTGCGGT+AGG + chr8_3:58427193-58427212 Msa1297850:CDS 50.0%
TAATGGAAGCCCTACCGCAA+CGG - chr8_3:58427206-58427225 None:intergenic 50.0%
! GTTGTTTAGGGCCGAATGGT+TGG - chr8_3:58427513-58427532 None:intergenic 50.0%
!! CTGTGTTGTTTAGGGCCGAA+TGG - chr8_3:58427517-58427536 None:intergenic 50.0%
CTTGCCACTCATCAACCTCA+AGG + chr8_3:58427538-58427557 Msa1297850:CDS 50.0%
!! TGGACCTTGAGGTTGATGAG+TGG - chr8_3:58427545-58427564 None:intergenic 50.0%
ACTCATCAACCTCAAGGTCC+AGG + chr8_3:58427544-58427563 Msa1297850:CDS 50.0%
ATGTGGCGTCACACTGAAAC+CGG + chr8_3:58428804-58428823 Msa1297850:CDS 50.0%
TTAAATGACCTGCGTGGGTG+GGG - chr8_3:58429651-58429670 None:intergenic 50.0%
ATCACAATTGGACTTGCCCC+AGG + chr8_3:58430206-58430225 Msa1297850:CDS 50.0%
CACTATCGCAAGTTCACCTG+GGG - chr8_3:58430225-58430244 None:intergenic 50.0%
CATTGTGATGTGGCACGTAG+TGG + chr8_3:58430586-58430605 Msa1297850:CDS 50.0%
CCAGGCCATGTAACATCTCT+GGG - chr8_3:58430728-58430747 None:intergenic 50.0%
ACCAGGCCATGTAACATCTC+TGG - chr8_3:58430729-58430748 None:intergenic 50.0%
CTTGTAAGAAGGGGAGGGTC+AGG - chr8_3:58426841-58426860 None:intergenic 55.0%
ATCTGGAAGCCTGGACCTTG+AGG - chr8_3:58427556-58427575 None:intergenic 55.0%
GGTCCAGGCTTCCAGATCAA+TGG + chr8_3:58427559-58427578 Msa1297850:CDS 55.0%
TGGCCATTGATCTGGAAGCC+TGG - chr8_3:58427565-58427584 None:intergenic 55.0%
CCCAGAGATGTTACATGGCC+TGG + chr8_3:58430725-58430744 Msa1297850:CDS 55.0%
ATCATGTACCCCACCCACGC+AGG + chr8_3:58429640-58429659 Msa1297850:intron 60.0%
ACAGCGGTCGGAAACGACGT+CGG + chr8_3:58430260-58430279 Msa1297850:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58426784 58430906 58426784 ID=Msa1297850;Name=Msa1297850
chr8_3 mRNA 58426784 58430906 58426784 ID=Msa1297850-mRNA-1;Parent=Msa1297850;Name=Msa1297850-mRNA-1;_AED=0.05;_eAED=0.05;_QI=16|1|1|1|1|1|5|146|675
chr8_3 exon 58426784 58427593 58426784 ID=Msa1297850-mRNA-1:exon:16754;Parent=Msa1297850-mRNA-1
chr8_3 exon 58428461 58428842 58428461 ID=Msa1297850-mRNA-1:exon:16755;Parent=Msa1297850-mRNA-1
chr8_3 exon 58429093 58429206 58429093 ID=Msa1297850-mRNA-1:exon:16756;Parent=Msa1297850-mRNA-1
chr8_3 exon 58429930 58430468 58429930 ID=Msa1297850-mRNA-1:exon:16757;Parent=Msa1297850-mRNA-1
chr8_3 exon 58430562 58430906 58430562 ID=Msa1297850-mRNA-1:exon:16758;Parent=Msa1297850-mRNA-1
chr8_3 five_prime_UTR 58426784 58426799 58426784 ID=Msa1297850-mRNA-1:five_prime_utr;Parent=Msa1297850-mRNA-1
chr8_3 CDS 58426800 58427593 58426800 ID=Msa1297850-mRNA-1:cds;Parent=Msa1297850-mRNA-1
chr8_3 CDS 58428461 58428842 58428461 ID=Msa1297850-mRNA-1:cds;Parent=Msa1297850-mRNA-1
chr8_3 CDS 58429093 58429206 58429093 ID=Msa1297850-mRNA-1:cds;Parent=Msa1297850-mRNA-1
chr8_3 CDS 58429930 58430468 58429930 ID=Msa1297850-mRNA-1:cds;Parent=Msa1297850-mRNA-1
chr8_3 CDS 58430562 58430760 58430562 ID=Msa1297850-mRNA-1:cds;Parent=Msa1297850-mRNA-1
chr8_3 three_prime_UTR 58430761 58430906 58430761 ID=Msa1297850-mRNA-1:three_prime_utr;Parent=Msa1297850-mRNA-1
Gene Sequence

>Msa1297850

ATGGCTTCCACCACCATAAAATTTACGCTTTTCTTAACCCTGACCCTCCCCTTCTTACAAGTCGTAGTTTCTGTTACCCCATTGCATTTTCAACACCCGCTTGATCCTTTAACCAAAGAAGAGTATTCTCTTGTCCAAACAACAGTCATGCACAAATATCCCACCTCAAAGAACAAAGTAGCTTTTCACTATATTGGCTTAGATGACCCTGAAAAAAATGATATTCTCAAATGGGAATCTTCCGAACCAAGTGTTATAACAATCCCTCGTAAAGCCTTTGTCATTGCTATCATCAATAACGTCGAAAGCCATGAGATAGTAATTGATTTAAGGTTGAAGAGCATTGTCTCCGACAATATTCACAAAGGGAATGGTTTCCCAACGCTTTCGGTTGATGAACAAACCGTTGCGGTAGGGCTTCCATTAAAATATCCTCCTTTCATTGCATCAATGAAAAAGAGAGGATTGAATCTCTCTGAGGTAGTTTGTTCTACTTTCACTATGGGATGGTATGGAGAAGAGAAAAGTAGTAGGACCGTGAGGTTAGACTGCTTAATGAAAGAAAACACTGCCAATATATATGTTAGGCCTATTACTGGAATTACAATTGTTGTTGATCTTGAACTTATGAAGATTGTTGAGTATCATGATAGAGTTATTGAAGCTGTGCCTACGGATGAGAACACAGAATTTAGGGCTTCACATCAGAGCCAACCATTCGGCCCTAAACAACACAGTCTTGCCACTCATCAACCTCAAGGTCCAGGCTTCCAGATCAATGGCCACAGTGTTAGCTGGGCAAATTGGAAGTTACACATAGGATTTGATGTGCGAGCTGGAGTGATATTATCATTGGCTTCAATTTATGATCTTGAGAAGCACAAGTCTCGTCGTGTATTATACAAAGGGTACATTTCAGAGCTTTTCGTGCCATACCAAGATCCATCAGACGAGTTTTACTTTAAGACTTTCTTTGATGTTGGCGAGTATGGATTTGGTTTGTCTACTGTGTCTTTGATACCCAACCGTGATTGTCCATCAAATGCCCAGTTCATTGATACATACATTCACTCTGCTGACGGTACCCCGATTCTCTTGAAGAATGTTATTTGTGTTTTTGAACAATATAACAATATCATGTGGCGTCACACTGAAACCGGCGTTCCTAATGAATTCATTGAAGAATCTAGAACCGAAGTAAACTTGATAGTAAGGAGTATAGTTACTGTGGGTAACTATGACAACGTTGTAGATTGGGAGTTCAAAACAAGTGGTTCCATCAAACCTGCGATAGCACTTTCAGGTATACTGGAAATTAAGGGAACAAACATTAAGCACAAGGATGAGGTTAAGGAAGATCTACATGGTACCTTGGTGTCAGCAAACAGCATTGGCATTTACCACGACCACTTATACATTTACTATCTTGACCTTGATATTGATGGTACAAACAACTCATTCGAGAAAACAAGTTTAAAGACGGTAAGAATCACTGATGGAAGTTCAAAGAGAAAGAGTTATTGGACCACTGAGACTCAAACTGCTAAAACTGAATCAGATGCAAAAATCACAATTGGACTTGCCCCAGGTGAACTTGCGATAGTGAATCCAAACAAAAAAACAGCGGTCGGAAACGACGTCGGATACCGTTTGATCCCAGCAATTCCATCTCATCCACTTTTAACTGAGGATGATTATCCACAAATACGTGGTGCTTTTACCAATTATAATGTTTGGGTCACACCTTATAATAGAACTGAAAAATGGGCTGGTGGACTCTATGTTGATCATAGCCATGGAGAAGATACTTTAGCTGTTTGGACCAAAAAGAATAGAGACATTGTGAACAAGGACATTGTGATGTGGCACGTAGTGGGAATTCATCATGTTCCAGCACAAGAAGATTTTCCCATAATGCCAATATTAAGCACTGCTTTTGAGCTGAGGCCAACTAATTTCTTCGAGAGGAATCCAGTTCTTAAGACACTTTCTCCCAGAGATGTTACATGGCCTGGTTGCCCCAAGTAA

Protein sequence

>Msa1297850

MASTTIKFTLFLTLTLPFLQVVVSVTPLHFQHPLDPLTKEEYSLVQTTVMHKYPTSKNKVAFHYIGLDDPEKNDILKWESSEPSVITIPRKAFVIAIINNVESHEIVIDLRLKSIVSDNIHKGNGFPTLSVDEQTVAVGLPLKYPPFIASMKKRGLNLSEVVCSTFTMGWYGEEKSSRTVRLDCLMKENTANIYVRPITGITIVVDLELMKIVEYHDRVIEAVPTDENTEFRASHQSQPFGPKQHSLATHQPQGPGFQINGHSVSWANWKLHIGFDVRAGVILSLASIYDLEKHKSRRVLYKGYISELFVPYQDPSDEFYFKTFFDVGEYGFGLSTVSLIPNRDCPSNAQFIDTYIHSADGTPILLKNVICVFEQYNNIMWRHTETGVPNEFIEESRTEVNLIVRSIVTVGNYDNVVDWEFKTSGSIKPAIALSGILEIKGTNIKHKDEVKEDLHGTLVSANSIGIYHDHLYIYYLDLDIDGTNNSFEKTSLKTVRITDGSSKRKSYWTTETQTAKTESDAKITIGLAPGELAIVNPNKKTAVGNDVGYRLIPAIPSHPLLTEDDYPQIRGAFTNYNVWVTPYNRTEKWAGGLYVDHSHGEDTLAVWTKKNRDIVNKDIVMWHVVGIHHVPAQEDFPIMPILSTAFELRPTNFFERNPVLKTLSPRDVTWPGCPK*