AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258010 MtrunA17_Chr2g0320031 93.730 319 20 0 1 319 1 319 0.0 617
Msa0258010 MtrunA17_Chr2g0320061 83.386 319 52 1 1 319 1 318 0.0 545
Msa0258010 MtrunA17_Chr2g0320051 81.818 319 57 1 1 319 1 318 0.0 534
Msa0258010 MtrunA17_Chr2g0320101 78.683 319 66 2 1 319 1 317 0.0 511
Msa0258010 MtrunA17_Chr2g0320071 78.370 319 67 2 1 319 1 317 0.0 510
Msa0258010 MtrunA17_Chr2g0320091 74.062 320 80 3 1 319 1 318 1.91e-168 470
Msa0258010 MtrunA17_Chr3g0129051 60.883 317 119 4 5 319 9 322 2.93e-133 381
Msa0258010 MtrunA17_Chr3g0129061 63.399 306 109 3 16 319 18 322 9.98e-132 377
Msa0258010 MtrunA17_Chr3g0129041 61.755 319 114 3 3 319 10 322 2.04e-130 374
Msa0258010 MtrunA17_Chr7g0244461 57.718 298 125 1 22 319 16 312 5.88e-128 367
Msa0258010 MtrunA17_Chr5g0438021 57.143 315 132 3 7 319 12 325 1.46e-126 364
Msa0258010 MtrunA17_Chr7g0244451 57.525 299 126 1 21 319 19 316 1.68e-124 359
Msa0258010 MtrunA17_Chr3g0106921 54.286 315 139 4 8 319 8 320 1.40e-121 352
Msa0258010 MtrunA17_Chr3g0114451 54.232 319 145 1 1 319 1 318 4.25e-118 343
Msa0258010 MtrunA17_Chr4g0013171 54.574 317 140 4 5 319 7 321 4.60e-117 340
Msa0258010 MtrunA17_Chr4g0043391 54.062 320 139 3 4 319 9 324 1.15e-115 337
Msa0258010 MtrunA17_Chr4g0038171 53.438 320 137 3 4 319 10 321 9.35e-115 334
Msa0258010 MtrunA17_Chr1g0213061 52.336 321 149 3 1 319 3 321 7.24e-114 332
Msa0258010 MtrunA17_Chr4g0038161 53.750 320 135 4 4 319 10 320 9.32e-113 329
Msa0258010 MtrunA17_Chr5g0432441 55.667 300 128 3 24 319 28 326 8.95e-112 327
Msa0258010 MtrunA17_Chr4g0038151 52.960 321 142 5 4 319 5 321 2.11e-111 326
Msa0258010 MtrunA17_Chr3g0106901 56.229 297 129 1 23 319 28 323 2.90e-111 325
Msa0258010 MtrunA17_Chr4g0013181 55.631 293 127 3 29 319 62 353 3.34e-111 327
Msa0258010 MtrunA17_Chr5g0432351 52.532 316 145 4 8 319 7 321 3.37e-110 323
Msa0258010 MtrunA17_Chr5g0432341 53.165 316 143 4 8 319 7 321 8.15e-110 322
Msa0258010 MtrunA17_Chr4g0013201 52.703 296 139 1 24 319 44 338 9.46e-110 322
Msa0258010 MtrunA17_Chr5g0404721 51.495 301 139 1 26 319 30 330 1.24e-109 322
Msa0258010 MtrunA17_Chr5g0432331 52.997 317 142 5 7 319 39 352 4.08e-109 321
Msa0258010 MtrunA17_Chr7g0224371 48.896 317 159 3 4 319 8 322 1.06e-105 311
Msa0258010 MtrunA17_Chr8g0372601 48.852 305 149 1 22 319 26 330 1.27e-104 309
Msa0258010 MtrunA17_Chr3g0107881 49.367 316 155 4 8 319 10 324 3.35e-104 308
Msa0258010 MtrunA17_Chr5g0402581 49.533 321 143 5 7 319 17 326 1.01e-102 304
Msa0258010 MtrunA17_Chr4g0013191 51.000 300 143 3 23 319 42 340 1.20e-102 304
Msa0258010 MtrunA17_Chr1g0175561 47.771 314 155 3 15 319 13 326 1.03e-101 301
Msa0258010 MtrunA17_Chr5g0402571 48.571 315 152 4 13 319 14 326 4.13e-100 297
Msa0258010 MtrunA17_Chr7g0258811 45.652 322 166 3 7 319 50 371 2.84e-99 297
Msa0258010 MtrunA17_Chr2g0292211 47.222 324 158 3 9 319 18 341 9.47e-99 295
Msa0258010 MtrunA17_Chr4g0070951 48.882 313 140 4 21 319 23 329 1.15e-98 294
Msa0258010 MtrunA17_Chr2g0292251 49.508 305 146 2 23 319 25 329 3.52e-98 293
Msa0258010 MtrunA17_Chr2g0299691 47.273 330 153 4 5 319 35 358 2.27e-97 291
Msa0258010 MtrunA17_Chr1g0155611 50.000 302 143 2 26 319 46 347 1.77e-96 289
Msa0258010 MtrunA17_Chr2g0292151 49.673 306 144 3 23 319 26 330 6.86e-96 288
Msa0258010 MtrunA17_Chr2g0292181 48.525 305 149 2 23 319 35 339 1.35e-94 285
Msa0258010 MtrunA17_Chr2g0292241 48.197 305 150 2 23 319 26 330 7.89e-94 282
Msa0258010 MtrunA17_Chr2g0292271 46.885 305 154 2 23 319 26 330 7.02e-93 280
Msa0258010 MtrunA17_Chr4g0068621 45.151 299 159 1 26 319 38 336 1.27e-91 276
Msa0258010 MtrunA17_Chr2g0292111 47.059 306 152 3 23 319 26 330 1.03e-89 272
Msa0258010 MtrunA17_Chr2g0291751 44.648 327 166 3 1 319 11 330 2.00e-89 271
Msa0258010 MtrunA17_Chr5g0400331 45.752 306 154 2 26 319 26 331 1.87e-88 268
Msa0258010 MtrunA17_Chr2g0292261 45.902 305 157 2 23 319 26 330 5.50e-88 267
Msa0258010 MtrunA17_Chr2g0292091 44.737 304 160 2 24 319 22 325 6.07e-88 267
Msa0258010 MtrunA17_Chr2g0292291 45.752 306 157 3 23 319 27 332 1.49e-87 266
Msa0258010 MtrunA17_Chr5g0432401 44.828 319 130 7 4 318 9 285 1.99e-85 258
Msa0258010 MtrunA17_Chr4g0013721 44.737 304 157 4 23 319 97 396 8.98e-85 261
Msa0258010 MtrunA17_Chr2g0292101 44.079 304 162 2 24 319 23 326 1.97e-83 255
Msa0258010 MtrunA17_Chr3g0128061 41.639 305 169 3 23 319 23 326 8.76e-82 251
Msa0258010 MtrunA17_Chr5g0421411 45.552 281 142 5 50 319 5 285 7.19e-81 247
Msa0258010 MtrunA17_Chr4g0013821 40.864 301 167 4 26 319 28 324 4.35e-78 241
Msa0258010 MtrunA17_Chr8g0371381 41.860 301 161 6 26 319 26 319 3.17e-76 236
Msa0258010 MtrunA17_Chr6g0477071 36.842 323 192 8 1 319 28 342 5.49e-76 236
Msa0258010 MtrunA17_Chr1g0204011 38.580 324 182 6 3 319 9 322 7.51e-75 233
Msa0258010 MtrunA17_Chr5g0405991 39.264 326 178 7 1 319 4 316 1.35e-74 232
Msa0258010 MtrunA17_Chr2g0322861 40.810 321 176 8 8 319 71 386 2.19e-74 233
Msa0258010 MtrunA17_Chr2g0279041 41.528 301 159 6 30 319 31 325 1.64e-73 229
Msa0258010 MtrunA17_Chr4g0024121 38.199 322 189 4 6 319 7 326 2.27e-73 229
Msa0258010 MtrunA17_Chr1g0157051 39.264 326 181 8 1 318 1 317 5.32e-73 228
Msa0258010 MtrunA17_Chr6g0467161 42.953 298 160 7 26 319 45 336 1.80e-72 227
Msa0258010 MtrunA17_Chr1g0148021 38.838 327 187 5 3 319 5 328 3.74e-72 226
Msa0258010 MtrunA17_Chr4g0063671 39.264 326 179 7 7 319 1 320 6.03e-72 225
Msa0258010 MtrunA17_Chr7g0268501 41.528 301 164 5 26 319 25 320 5.83e-71 223
Msa0258010 MtrunA17_Chr7g0268521 41.528 301 164 5 26 319 25 320 5.83e-71 223
Msa0258010 MtrunA17_Chr7g0254201 38.689 305 168 5 24 319 18 312 1.50e-70 221
Msa0258010 MtrunA17_Chr4g0053871 40.439 319 184 4 5 318 6 323 3.15e-70 221
Msa0258010 MtrunA17_Chr1g0194151 39.275 331 182 7 1 319 10 333 6.29e-70 220
Msa0258010 MtrunA17_Chr4g0046131 39.697 330 181 8 3 315 14 342 7.38e-70 221
Msa0258010 MtrunA17_Chr6g0460711 39.535 301 172 5 24 319 19 314 4.64e-69 218
Msa0258010 MtrunA17_Chr7g0225221 38.188 309 165 4 25 319 24 320 1.03e-68 217
Msa0258010 MtrunA17_Chr7g0254231 39.731 297 173 5 24 319 20 311 2.17e-68 216
Msa0258010 MtrunA17_Chr1g0188431 35.938 320 198 6 1 319 14 327 2.23e-68 216
Msa0258010 MtrunA17_Chr1g0194271 38.757 338 181 7 1 319 10 340 2.86e-68 216
Msa0258010 MtrunA17_Chr1g0164891 39.867 301 169 5 30 319 93 392 5.81e-68 217
Msa0258010 MtrunA17_Chr2g0296621 39.073 302 166 7 26 319 50 341 1.60e-67 214
Msa0258010 MtrunA17_Chr4g0075241 36.570 309 173 5 25 319 28 327 3.76e-65 208
Msa0258010 MtrunA17_Chr6g0467121 37.349 332 188 7 2 319 38 363 4.53e-64 207
Msa0258010 MtrunA17_Chr5g0401431 37.690 329 193 5 1 318 1 328 8.05e-64 204
Msa0258010 MtrunA17_Chr1g0181511 35.548 301 187 4 24 319 25 323 1.91e-63 203
Msa0258010 MtrunA17_Chr4g0076211 38.206 301 169 7 27 319 42 333 1.91e-63 204
Msa0258010 MtrunA17_Chr1g0197411 35.562 329 197 6 1 319 7 330 2.09e-63 204
Msa0258010 MtrunA17_Chr4g0072091 39.404 302 167 6 25 315 23 319 1.21e-62 201
Msa0258010 MtrunA17_Chr3g0136751 35.976 328 195 4 1 319 1 322 2.47e-61 198
Msa0258010 MtrunA17_Chr3g0114461 53.804 184 85 0 136 319 9 192 6.45e-61 192
Msa0258010 MtrunA17_Chr2g0316481 35.045 331 174 7 24 315 74 402 5.55e-60 197
Msa0258010 MtrunA17_Chr1g0181481 35.216 301 188 4 24 319 25 323 1.18e-59 194
Msa0258010 MtrunA17_Chr6g0451571 36.184 304 185 5 24 319 32 334 1.18e-59 194
Msa0258010 MtrunA17_Chr1g0181431 34.551 301 190 4 24 319 25 323 2.47e-59 193
Msa0258010 MtrunA17_Chr2g0316831 33.939 330 179 5 24 315 110 438 4.45e-59 196
Msa0258010 MtrunA17_Chr2g0279061 42.912 261 132 6 70 319 12 266 5.81e-59 190
Msa0258010 MtrunA17_Chr2g0316791 34.835 333 172 9 24 315 74 402 2.04e-58 193
Msa0258010 MtrunA17_Chr2g0278671 38.312 308 172 8 24 319 22 323 3.90e-58 190
Msa0258010 MtrunA17_Chr2g0316191 33.735 332 178 7 24 315 74 403 1.97e-57 190
Msa0258010 MtrunA17_Chr8g0364291 34.277 318 199 4 11 319 8 324 4.22e-57 187
Msa0258010 MtrunA17_Chr2g0329641 34.139 331 197 7 4 319 11 335 2.41e-56 186
Msa0258010 MtrunA17_Chr6g0467251 34.985 323 198 6 6 319 9 328 6.20e-56 185
Msa0258010 MtrunA17_Chr4g0074851 34.448 299 189 4 26 319 32 328 6.50e-54 179
Msa0258010 MtrunA17_Chr5g0413051 35.484 310 183 9 24 319 71 377 7.49e-54 180
Msa0258010 MtrunA17_Chr2g0311251 33.731 335 179 9 24 318 9 340 3.47e-53 177
Msa0258010 MtrunA17_Chr2g0311241 31.034 377 176 9 24 319 58 431 2.49e-52 177
Msa0258010 MtrunA17_Chr3g0114491 59.633 109 44 0 25 133 17 125 2.07e-42 143
Msa0258010 MtrunA17_Chr2g0292281 40.952 210 104 5 119 319 18 216 9.09e-41 142
Msa0258010 MtrunA17_Chr2g0316811 41.765 170 96 2 24 191 48 216 4.44e-39 140
Msa0258010 MtrunA17_Chr2g0316141 35.424 271 150 10 72 319 11 279 1.57e-38 137
Msa0258010 MtrunA17_Chr2g0316181 35.424 271 150 10 72 319 11 279 1.57e-38 137
Msa0258010 MtrunA17_Chr4g0004591 26.006 323 171 4 23 318 74 355 4.65e-36 133
Msa0258010 MtrunA17_Chr5g0432321 52.137 117 55 1 147 263 17 132 9.86e-35 123
Msa0258010 MtrunA17_Chr3g0104101 40.690 145 75 5 186 319 5 149 1.96e-24 96.7
Msa0258010 MtrunA17_Chr5g0432361 50.000 90 43 2 230 318 20 108 1.46e-23 93.2
Msa0258010 MtrunA17_Chr1g0181491 41.593 113 64 2 24 136 10 120 1.75e-23 94.4
Msa0258010 MtrunA17_Chr1g0181501 30.159 189 125 4 136 319 3 189 1.79e-21 90.1
Msa0258010 MtrunA17_Chr7g0254181 40.000 105 59 2 88 192 22 122 1.38e-19 84.0
Msa0258010 MtrunA17_Chr6g0468731 54.167 72 29 2 65 136 22 89 5.48e-18 77.8
Msa0258010 MtrunA17_Chr3g0137751 27.839 273 129 10 41 298 91 310 1.06e-16 79.3
Msa0258010 MtrunA17_Chr4g0013811 43.243 74 42 0 137 210 6 79 8.61e-16 71.2
Msa0258010 MtrunA17_Chr7g0254171 31.061 132 90 1 72 203 4 134 5.81e-14 68.2
Msa0258010 MtrunA17_Chr3g0124821 27.778 198 119 6 119 306 180 363 6.72e-14 71.6
Msa0258010 MtrunA17_Chr1g0196191 50.746 67 32 1 68 134 27 92 2.24e-12 63.9
Msa0258010 MtrunA17_Chr2g0316771 25.140 179 96 4 174 315 5 182 6.42e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258010 AT5G05340.1 59.667 300 118 2 22 319 26 324 6.40e-130 373
Msa0258010 AT5G58400.1 53.968 315 140 4 8 319 13 325 1.22e-112 329
Msa0258010 AT3G50990.1 51.077 325 150 3 3 319 18 341 3.73e-110 324
Msa0258010 AT5G58390.1 53.797 316 142 4 7 319 2 316 1.77e-109 321
Msa0258010 AT4G36430.1 49.062 320 150 4 8 319 16 330 9.16e-109 320
Msa0258010 AT1G14550.1 50.000 314 155 2 8 319 8 321 2.30e-107 316
Msa0258010 AT5G66390.1 51.163 301 140 1 26 319 33 333 1.33e-106 315
Msa0258010 AT2G18140.1 48.607 323 158 2 5 319 13 335 2.30e-106 314
Msa0258010 AT2G18150.1 51.678 298 135 3 30 319 40 336 3.71e-106 313
Msa0258010 AT5G06720.1 48.148 324 156 4 4 319 14 333 7.43e-103 305
Msa0258010 AT1G14540.1 47.188 320 163 2 1 319 1 315 9.81e-102 301
Msa0258010 AT1G44970.1 51.645 304 139 2 24 319 43 346 8.52e-101 300
Msa0258010 AT2G38390.1 48.254 315 154 3 14 319 19 333 4.81e-99 296
Msa0258010 AT3G32980.1 48.418 316 153 3 14 319 19 334 3.44e-98 293
Msa0258010 AT5G06730.1 46.296 324 162 4 4 319 15 334 8.80e-98 293
Msa0258010 AT4G08780.1 49.026 308 145 5 23 319 21 327 2.12e-97 291
Msa0258010 AT5G19890.1 47.531 324 152 6 6 319 12 327 2.22e-96 288
Msa0258010 AT1G49570.1 48.355 304 146 3 22 315 44 346 1.84e-95 286
Msa0258010 AT4G08770.1 46.326 313 158 3 17 319 15 327 9.45e-95 285
Msa0258010 AT2G38380.1 46.984 315 158 3 14 319 19 333 5.84e-94 283
Msa0258010 AT3G49120.1 46.605 324 162 4 6 319 13 335 3.27e-93 281
Msa0258010 AT4G16270.1 46.512 301 152 3 26 319 50 348 3.05e-90 273
Msa0258010 AT3G49110.1 45.062 324 167 4 6 319 14 336 4.14e-90 273
Msa0258010 AT2G22420.1 43.558 326 170 6 1 319 1 319 1.38e-86 263
Msa0258010 AT2G35380.1 44.377 329 164 5 9 319 8 335 6.80e-86 262
Msa0258010 AT5G19880.1 44.984 309 157 5 23 319 22 329 6.15e-85 259
Msa0258010 AT1G68850.1 41.368 307 166 6 26 319 30 335 4.47e-84 257
Msa0258010 AT3G03670.1 41.584 303 168 3 24 319 21 321 9.89e-77 238
Msa0258010 AT1G05260.1 37.920 327 193 3 1 319 1 325 5.77e-76 236
Msa0258010 AT1G71695.1 41.176 323 184 5 1 319 19 339 1.64e-75 236
Msa0258010 AT5G15180.1 39.319 323 181 7 7 319 12 329 2.85e-74 232
Msa0258010 AT5G14130.1 38.580 324 186 6 4 319 12 330 8.64e-74 231
Msa0258010 AT5G17820.1 39.264 326 172 7 1 319 7 313 1.23e-73 229
Msa0258010 AT5G42180.1 42.333 300 160 5 26 318 23 316 2.22e-73 229
Msa0258010 AT5G14130.2 38.390 323 188 6 4 319 53 371 2.40e-73 231
Msa0258010 AT5G17820.2 39.264 326 172 7 1 319 60 366 1.09e-72 229
Msa0258010 AT5G64120.1 41.216 296 162 5 30 319 39 328 9.86e-71 223
Msa0258010 AT4G37530.1 40.196 306 172 4 24 319 25 329 5.30e-70 221
Msa0258010 AT2G41480.1 38.154 325 182 7 8 319 10 328 1.19e-69 220
Msa0258010 AT4G11290.1 36.842 323 194 3 5 319 6 326 1.83e-69 219
Msa0258010 AT5G40150.1 38.667 300 179 4 24 319 30 328 2.46e-69 219
Msa0258010 AT4G30170.1 40.453 309 167 7 22 319 23 325 4.31e-69 218
Msa0258010 AT3G28200.1 38.411 302 182 4 21 319 16 316 1.06e-68 217
Msa0258010 AT4G26010.1 38.629 321 183 9 1 319 1 309 1.48e-68 216
Msa0258010 AT3G01190.1 39.024 328 184 7 1 319 1 321 1.94e-68 216
Msa0258010 AT3G21770.1 37.086 302 180 3 24 317 27 326 2.15e-68 217
Msa0258010 AT5G67400.1 38.154 325 190 4 5 319 6 329 2.47e-68 216
Msa0258010 AT4G26010.2 38.629 321 183 9 1 319 29 337 2.69e-68 217
Msa0258010 AT1G05240.1 38.264 311 172 6 22 319 22 325 7.13e-68 215
Msa0258010 AT1G05250.1 38.264 311 172 6 22 319 22 325 7.13e-68 215
Msa0258010 AT3G49960.1 38.462 325 189 4 5 319 6 329 8.72e-68 215
Msa0258010 AT2G18980.1 38.820 322 182 5 8 319 7 323 1.42e-67 214
Msa0258010 AT4G37520.1 38.235 306 178 4 24 319 25 329 4.69e-67 213
Msa0258010 AT5G39580.1 40.404 297 164 6 30 319 29 319 9.78e-67 212
Msa0258010 AT4G33420.1 38.644 295 174 6 26 319 37 325 7.68e-66 210
Msa0258010 AT4G33420.2 38.644 295 174 6 26 319 84 372 3.04e-65 210
Msa0258010 AT5G51890.1 37.705 305 177 6 23 319 23 322 7.46e-65 207
Msa0258010 AT4G37520.2 37.908 306 176 5 24 319 25 326 1.04e-64 207
Msa0258010 AT2G34060.1 38.762 307 175 6 23 317 39 344 7.53e-64 206
Msa0258010 AT1G30870.1 38.667 300 165 7 26 315 51 341 5.66e-63 203
Msa0258010 AT2G35380.2 44.939 247 122 4 86 319 2 247 1.50e-62 199
Msa0258010 AT4G37530.2 42.913 254 135 3 24 267 25 278 2.32e-61 197
Msa0258010 AT5G64110.1 39.799 299 165 5 30 319 38 330 2.33e-61 199
Msa0258010 AT4G17690.1 36.577 298 184 4 26 319 26 322 2.62e-61 198
Msa0258010 AT4G25980.1 35.562 329 185 7 3 319 13 326 7.26e-61 197
Msa0258010 AT1G77100.1 39.077 325 186 10 1 319 1 319 1.59e-60 196
Msa0258010 AT4G31760.1 36.391 327 189 5 2 319 10 326 1.83e-60 196
Msa0258010 AT2G39040.1 39.103 312 171 8 23 319 43 350 2.08e-60 197
Msa0258010 AT2G24800.1 36.601 306 179 4 24 319 29 329 2.10e-60 196
Msa0258010 AT4G33870.1 32.440 336 179 7 24 315 66 397 2.58e-59 196
Msa0258010 AT5G64100.1 37.667 300 170 6 29 319 40 331 6.81e-59 192
Msa0258010 AT5G47000.1 35.093 322 199 6 4 319 13 330 1.69e-58 191
Msa0258010 AT1G34510.1 37.333 300 180 6 21 319 17 309 1.08e-57 189
Msa0258010 AT1G24110.1 37.231 325 186 8 5 319 6 322 2.30e-57 188
Msa0258010 AT5G24070.1 34.731 334 189 9 8 319 9 335 4.34e-57 188
Msa0258010 AT4G21960.1 34.853 307 193 4 18 319 23 327 1.13e-56 186
Msa0258010 AT2G43480.1 36.013 311 174 10 25 319 34 335 5.24e-56 185
Msa0258010 AT5G22410.1 35.410 305 177 8 24 316 26 322 4.55e-55 182
Msa0258010 AT2G37130.1 34.426 305 188 6 23 319 27 327 1.22e-53 179
Msa0258010 AT3G17070.1 34.024 338 195 10 2 319 10 339 1.33e-53 179
Msa0258010 AT2G37130.2 34.448 299 184 6 29 319 2 296 2.41e-52 174
Msa0258010 AT5G39580.2 40.609 197 108 4 30 226 29 216 1.18e-41 145
Msa0258010 AT4G25980.2 39.267 191 102 4 3 193 58 234 2.18e-40 143
Msa0258010 AT2G24800.2 37.915 211 122 3 24 229 29 235 4.02e-40 141
Msa0258010 AT3G17070.2 34.328 268 151 9 68 319 18 276 8.33e-39 138
Msa0258010 AT3G42570.1 35.484 93 59 1 102 193 57 149 1.89e-13 67.4
Msa0258010 AT4G08390.2 27.749 191 114 6 119 301 186 360 2.24e-13 70.5
Msa0258010 AT4G08390.5 27.749 191 114 6 119 301 186 360 2.24e-13 70.5
Msa0258010 AT4G08390.1 27.749 191 114 6 119 301 186 360 2.24e-13 70.5
Msa0258010 AT4G08390.3 27.749 191 114 6 119 301 185 359 2.62e-13 70.5
Msa0258010 AT1G77490.2 25.357 280 167 8 39 301 85 339 3.15e-13 70.5
Msa0258010 AT1G77490.1 25.357 280 167 8 39 301 85 339 3.63e-13 70.1

Find 74 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGACCTTACAGTCCTTTC+TGG 0.193319 2_2:-53994675 Msa0258010:CDS
CGCAGAAAGTTGTGCATTAA+TGG 0.195469 2_2:+53996753 None:intergenic
GCAGGGTTGTGAATTGATTT+TGG 0.222497 2_2:-53994281 Msa0258010:exon
ATTTGACAACAATTATTATA+AGG 0.243384 2_2:-53994493 Msa0258010:CDS
CAGAAGATGGTCCAGGAATT+TGG 0.260659 2_2:+53994745 None:intergenic
TTGAGAGATTGTTTAATTAC+AGG 0.275887 2_2:-53994162 Msa0258010:three_prime_UTR
AGAATCAAAGGGTGCTAAAT+TGG 0.309264 2_2:+53994530 None:intergenic
AAAGACCTTTATTAGCAATA+AGG 0.316103 2_2:+53994469 None:intergenic
TATTTATAGATTTAACTATA+TGG 0.322853 2_2:-53996833 Msa0258010:exon
TGTTGGTTCTCAAATTTCTT+TGG 0.324712 2_2:-53994418 Msa0258010:CDS
TTTCATTGCGCACAATAGTT+TGG 0.326396 2_2:+53996701 None:intergenic
CGCACAATAGTTTGGAGATT+AGG 0.343295 2_2:+53996709 None:intergenic
ATCAATCTTATTGGATGATA+AGG 0.345152 2_2:-53995214 Msa0258010:CDS
ATGTGATGCATCAATCTTAT+TGG 0.358275 2_2:-53995223 Msa0258010:CDS
AGTAAAATTAGTCCTCTTAC+TGG 0.361292 2_2:-53994330 Msa0258010:CDS
TTGATAATTTGTAGTATTGT+TGG 0.376154 2_2:-53994103 Msa0258010:three_prime_UTR
AAGGACCTTATTGCTAATAA+AGG 0.382204 2_2:-53994474 Msa0258010:CDS
TAGTCCTCTTACTGGGACTA+AGG 0.384532 2_2:-53994322 Msa0258010:CDS
GCAGCAAACAGCCAAATTCC+TGG 0.386973 2_2:-53994756 Msa0258010:CDS
GTGAGATCAGAAAGAATTGC+AGG 0.399204 2_2:-53994299 Msa0258010:CDS
CCCCTAGCTGAATCTTTGTT+AGG 0.406359 2_2:+53995162 None:intergenic
TAATTGTTGTCAAATTTAGT+TGG 0.427829 2_2:+53994501 None:intergenic
CATAAAGGTTGACTAGATCT+TGG 0.429036 2_2:-53994131 Msa0258010:three_prime_UTR
GATGATAAGGGAACATTTGT+CGG 0.429735 2_2:-53995201 Msa0258010:CDS
GTTCTCAAATTTCTTTGGTT+AGG 0.431163 2_2:-53994413 Msa0258010:CDS
TCAATCTTATTGGATGATAA+GGG 0.439805 2_2:-53995213 Msa0258010:CDS
TTACATTTACAAAGCAATCA+TGG 0.442899 2_2:+53996620 None:intergenic
TAGAGACTTTGCTGCTGCTA+TGG 0.447233 2_2:-53994361 Msa0258010:CDS
TTACAGGGTCTAGGTCATAA+AGG 0.449606 2_2:-53994146 Msa0258010:three_prime_UTR
CTTCATTTGCTTCCCTCCAT+TGG 0.453290 2_2:-53996871 Msa0258010:five_prime_UTR
ATTGTTTAATTACAGGGTCT+AGG 0.465800 2_2:-53994155 Msa0258010:three_prime_UTR
TCACCCTTAGTCCCAGTAAG+AGG 0.474368 2_2:+53994318 None:intergenic
TTGTGAGACTAATAATTTGA+GGG 0.486054 2_2:-53994221 Msa0258010:three_prime_UTR
AGCAAGGTTTCTGTTAATGT+TGG 0.494360 2_2:+53994593 None:intergenic
GTTAGGAAGTATAGTAGAGA+TGG 0.495131 2_2:-53994396 Msa0258010:CDS
TTGACACTCAGTTTGCCCTA+TGG 0.499810 2_2:+53994644 None:intergenic
AAAAGAAATTGTCCTACCTC+TGG 0.501405 2_2:-53994561 Msa0258010:CDS
TGTAACAAAGAGTGTAATCA+AGG 0.505971 2_2:+53996807 None:intergenic
CTTGCATCTCTTCTTCCTAG+TGG 0.506526 2_2:+53994795 None:intergenic
CTTTCTGGTGCACACACCAT+AGG 0.506834 2_2:-53994660 Msa0258010:CDS
AGTTGGAGTGACAGAATCAA+AGG 0.515916 2_2:+53994518 None:intergenic
CTAGCACTTGCAACTAGAGA+TGG 0.521717 2_2:-53995066 Msa0258010:CDS
AATTAATTTATATAGCTTGG+AGG 0.537880 2_2:-53994834 Msa0258010:intron
GATAGGTCAGAAGATGGTCC+AGG 0.542401 2_2:+53994738 None:intergenic
TTTGTGAGACTAATAATTTG+AGG 0.546498 2_2:-53994222 Msa0258010:three_prime_UTR
TGAGAGATTGTTTAATTACA+GGG 0.549156 2_2:-53994161 Msa0258010:three_prime_UTR
AACTAGAGATGGAATAGCAC+TGG 0.557344 2_2:-53995055 Msa0258010:intron
GACCTAACAAAGATTCAGCT+AGG 0.557775 2_2:-53995164 Msa0258010:CDS
AGAAATTGTCCTACCTCTGG+TGG 0.560005 2_2:-53994558 Msa0258010:CDS
TATAGCTTGGAGGACCCTCA+TGG 0.560384 2_2:-53994824 Msa0258010:intron
ACCTAACAAAGATTCAGCTA+GGG 0.564107 2_2:-53995163 Msa0258010:CDS
ATCTAGCTTGAAGCTACCAA+TGG 0.565347 2_2:+53996855 None:intergenic
AGTCCTCTTACTGGGACTAA+GGG 0.567071 2_2:-53994321 Msa0258010:CDS
TAGCTTGAAGCTACCAATGG+AGG 0.570010 2_2:+53996858 None:intergenic
GTGCACCAGAAAGGACTGTA+AGG 0.571331 2_2:+53994670 None:intergenic
TCCTAGTGGTACTGTCCATG+AGG 0.574303 2_2:+53994809 None:intergenic
TTTGCAAGAAGCTTCAACGT+TGG 0.574605 2_2:+53995113 None:intergenic
TCAATTTAATAAATATTGTG+TGG 0.574856 2_2:-53994191 Msa0258010:three_prime_UTR
ACATTCTAGTGAGTGTGGAT+AGG 0.580024 2_2:+53994721 None:intergenic
GTTGGAGTGACAGAATCAAA+GGG 0.583532 2_2:+53994519 None:intergenic
TTTCTGGTGCACACACCATA+GGG 0.590778 2_2:-53994659 Msa0258010:CDS
GTAAAATTAGTCCTCTTACT+GGG 0.603083 2_2:-53994329 Msa0258010:CDS
CCTAGTGGTACTGTCCATGA+GGG 0.605688 2_2:+53994810 None:intergenic
TTGAAACATTCTAGTGAGTG+TGG 0.606627 2_2:+53994716 None:intergenic
TAAATTGGTGTCACCACCAG+AGG 0.617325 2_2:+53994545 None:intergenic
AGCTTGAAGCTACCAATGGA+GGG 0.617960 2_2:+53996859 None:intergenic
AGTGTGGATAGGTCAGAAGA+TGG 0.621043 2_2:+53994732 None:intergenic
CCTAACAAAGATTCAGCTAG+GGG 0.634590 2_2:-53995162 Msa0258010:CDS
CTATGGTGTGTGCACCAGAA+AGG 0.646942 2_2:+53994661 None:intergenic
CCCTCATGGACAGTACCACT+AGG 0.647878 2_2:-53994810 Msa0258010:CDS
AATATCTGCACAAGAGACAG+TGG 0.650907 2_2:+53995089 None:intergenic
TGAGATCAGAAAGAATTGCA+GGG 0.655189 2_2:-53994298 Msa0258010:CDS
TTGGTGTCACCACCAGAGGT+AGG 0.659540 2_2:+53994549 None:intergenic
AACAAAGAGTGTAATCAAGG+TGG 0.714553 2_2:+53996810 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATAGATTTAACTATA+TGG - chr2_2:53994124-53994143 Msa0258010:three_prime_UTR 10.0%
!! CTTAATAATTTATATAAGTT+AGG - chr2_2:53994441-53994460 Msa0258010:CDS 10.0%
!! ACAAAATTCTAAATATTTAT+AGG - chr2_2:53995024-53995043 Msa0258010:intron 10.0%
!! CAAAATTCTAAATATTTATA+GGG - chr2_2:53995025-53995044 Msa0258010:intron 10.0%
!! ATTGAAAAATTAAAATGATT+GGG + chr2_2:53995430-53995449 None:intergenic 10.0%
!! TATTGAAAAATTAAAATGAT+TGG + chr2_2:53995431-53995450 None:intergenic 10.0%
!! CATATATAAATATATAAACT+AGG - chr2_2:53995965-53995984 Msa0258010:intron 10.0%
!! TATATAAATTAATTGAAACA+TGG + chr2_2:53996117-53996136 None:intergenic 10.0%
!!! AAACAACATCATTTTTTATT+GGG + chr2_2:53995068-53995087 None:intergenic 15.0%
!! AAAAAAAAAAAAAATGCACA+GGG + chr2_2:53995222-53995241 None:intergenic 15.0%
!! AAAAAAAAAAAAAAATGCAC+AGG + chr2_2:53995223-53995242 None:intergenic 15.0%
!!! GTTTTATTTCTTTGTTTATT+TGG - chr2_2:53995706-53995725 Msa0258010:intron 15.0%
!!! TTTAACTTCAGTAATATTAA+CGG - chr2_2:53995999-53996018 Msa0258010:intron 15.0%
!! TTCAATTAATTTATATAGCT+TGG - chr2_2:53996120-53996139 Msa0258010:intron 15.0%
!! ATTTGACAACAATTATTATA+AGG - chr2_2:53996464-53996483 Msa0258010:intron 15.0%
!! TCAATTTAATAAATATTGTG+TGG - chr2_2:53996766-53996785 Msa0258010:CDS 15.0%
!! TAAGGATTAATTATTCAGAT+TGG - chr2_2:53994650-53994669 Msa0258010:CDS 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr2_2:53994805-53994824 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr2_2:53994806-53994825 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2_2:53994836-53994855 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2_2:53994837-53994856 None:intergenic 20.0%
!!! ACATTTTCCTTAAACATTTT+AGG - chr2_2:53994869-53994888 Msa0258010:intron 20.0%
!!! CATTTTCCTTAAACATTTTA+GGG - chr2_2:53994870-53994889 Msa0258010:intron 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr2_2:53994897-53994916 None:intergenic 20.0%
!! TATTGGGTTAATTAAGTAAA+TGG + chr2_2:53995052-53995071 None:intergenic 20.0%
!!! CAAACAACATCATTTTTTAT+TGG + chr2_2:53995069-53995088 None:intergenic 20.0%
!! AAAAAAAAAAAAATGCACAG+GGG + chr2_2:53995221-53995240 None:intergenic 20.0%
!! TCAACAACAAAAAATAATCA+CGG - chr2_2:53995613-53995632 Msa0258010:intron 20.0%
!!! TATTTCTTTGTTTATTTGGT+AGG - chr2_2:53995710-53995729 Msa0258010:intron 20.0%
!!! ATTTCTTTGTTTATTTGGTA+GGG - chr2_2:53995711-53995730 Msa0258010:intron 20.0%
!!! GTTAATATTTTTTTACAGAG+GGG + chr2_2:53996036-53996055 None:intergenic 20.0%
!!! GGTTAATATTTTTTTACAGA+GGG + chr2_2:53996037-53996056 None:intergenic 20.0%
!! TATTAACCCTAATATTACAT+TGG - chr2_2:53996049-53996068 Msa0258010:intron 20.0%
!! TGTTTACCAATGTAATATTA+GGG + chr2_2:53996058-53996077 None:intergenic 20.0%
!! ATGTTTACCAATGTAATATT+AGG + chr2_2:53996059-53996078 None:intergenic 20.0%
!! ATTAATTGAAACATGGTTAT+AGG + chr2_2:53996110-53996129 None:intergenic 20.0%
!! AATTAATTTATATAGCTTGG+AGG - chr2_2:53996123-53996142 Msa0258010:intron 20.0%
!! TAATTGTTGTCAAATTTAGT+TGG + chr2_2:53996459-53996478 None:intergenic 20.0%
!!! TTGATAATTTGTAGTATTGT+TGG - chr2_2:53996854-53996873 Msa0258010:five_prime_UTR 20.0%
! TTACATTTACAAAGCAATCA+TGG + chr2_2:53994340-53994359 None:intergenic 25.0%
! TTGAGTAGAGTTATGTTTAA+AGG - chr2_2:53994545-53994564 Msa0258010:CDS 25.0%
! ATCGTGTTAAAATATTGTCT+TGG - chr2_2:53994597-53994616 Msa0258010:CDS 25.0%
! TCGTGTTAAAATATTGTCTT+GGG - chr2_2:53994598-53994617 Msa0258010:CDS 25.0%
!! TGCTGATGGAAAATTTTATA+AGG - chr2_2:53994965-53994984 Msa0258010:intron 25.0%
!!! AAAGTGTGACTTTATTTTGT+AGG - chr2_2:53994993-53995012 Msa0258010:intron 25.0%
!!! AAGTGTGACTTTATTTTGTA+GGG - chr2_2:53994994-53995013 Msa0258010:intron 25.0%
!!! TGTTGTTTTATATGTTGTCT+TGG - chr2_2:53995267-53995286 Msa0258010:intron 25.0%
! ATTTATTACTGTACTCACTA+TGG + chr2_2:53995579-53995598 None:intergenic 25.0%
! CAACAACAAAAAATAATCAC+GGG - chr2_2:53995614-53995633 Msa0258010:intron 25.0%
!!! TTCAGTTACTATTTTAGTCA+CGG - chr2_2:53995643-53995662 Msa0258010:intron 25.0%
! ATCAATCTTATTGGATGATA+AGG - chr2_2:53995743-53995762 Msa0258010:intron 25.0%
! TCAATCTTATTGGATGATAA+GGG - chr2_2:53995744-53995763 Msa0258010:intron 25.0%
!!! GGGTTAATATTTTTTTACAG+AGG + chr2_2:53996038-53996057 None:intergenic 25.0%
!! TTCTTTTTCTTAAGTTAGCA+AGG + chr2_2:53996383-53996402 None:intergenic 25.0%
! AAAGACCTTTATTAGCAATA+AGG + chr2_2:53996491-53996510 None:intergenic 25.0%
! TTTGTGAGACTAATAATTTG+AGG - chr2_2:53996735-53996754 Msa0258010:CDS 25.0%
! TTGTGAGACTAATAATTTGA+GGG - chr2_2:53996736-53996755 Msa0258010:CDS 25.0%
! TTGAGAGATTGTTTAATTAC+AGG - chr2_2:53996795-53996814 Msa0258010:CDS 25.0%
! TGAGAGATTGTTTAATTACA+GGG - chr2_2:53996796-53996815 Msa0258010:CDS 25.0%
! TGTAACAAAGAGTGTAATCA+AGG + chr2_2:53994153-53994172 None:intergenic 30.0%
AAGTTATCAAAAATGAAGCC+CGG - chr2_2:53994285-53994304 Msa0258010:exon 30.0%
TAGAGTTATGTTTAAAGGTG+TGG - chr2_2:53994550-53994569 Msa0258010:CDS 30.0%
CGTGTTAAAATATTGTCTTG+GGG - chr2_2:53994599-53994618 Msa0258010:CDS 30.0%
GTAGATTAGAGAGAATTGTA+AGG - chr2_2:53994632-53994651 Msa0258010:CDS 30.0%
TGTTTAAGGAAAATGTCACA+TGG + chr2_2:53994865-53994884 None:intergenic 30.0%
TTTGGTCCCTAAAATGTTTA+AGG + chr2_2:53994879-53994898 None:intergenic 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - chr2_2:53994901-53994920 Msa0258010:intron 30.0%
!! GTTGATGGAAATTTTTGACA+GGG - chr2_2:53994902-53994921 Msa0258010:intron 30.0%
ATAGTGACTAAAAATGCTGA+TGG - chr2_2:53994951-53994970 Msa0258010:intron 30.0%
TTGATTTCTCATCTTCATTG+TGG - chr2_2:53995301-53995320 Msa0258010:intron 30.0%
!!! TCAGTTACTATTTTAGTCAC+GGG - chr2_2:53995644-53995663 Msa0258010:intron 30.0%
ATGTGATGCATCAATCTTAT+TGG - chr2_2:53995734-53995753 Msa0258010:intron 30.0%
GTTCATTGTTCATGTCTTAT+AGG + chr2_2:53995946-53995965 None:intergenic 30.0%
GGATACACATATTGTTTACA+GGG + chr2_2:53996089-53996108 None:intergenic 30.0%
AGGATACACATATTGTTTAC+AGG + chr2_2:53996090-53996109 None:intergenic 30.0%
AAGGACCTTATTGCTAATAA+AGG - chr2_2:53996483-53996502 Msa0258010:intron 30.0%
! TCTGATCAAGTTCTTTTCAA+TGG - chr2_2:53996516-53996535 Msa0258010:intron 30.0%
!! TGTTGGTTCTCAAATTTCTT+TGG - chr2_2:53996539-53996558 Msa0258010:intron 30.0%
GTTCTCAAATTTCTTTGGTT+AGG - chr2_2:53996544-53996563 Msa0258010:intron 30.0%
AGTAAAATTAGTCCTCTTAC+TGG - chr2_2:53996627-53996646 Msa0258010:CDS 30.0%
GTAAAATTAGTCCTCTTACT+GGG - chr2_2:53996628-53996647 Msa0258010:CDS 30.0%
!! GTTGTGAATTGATTTTGGAT+TGG - chr2_2:53996681-53996700 Msa0258010:CDS 30.0%
ATTGTTTAATTACAGGGTCT+AGG - chr2_2:53996802-53996821 Msa0258010:CDS 30.0%
! AACAAAGAGTGTAATCAAGG+TGG + chr2_2:53994150-53994169 None:intergenic 35.0%
TTTCATTGCGCACAATAGTT+TGG + chr2_2:53994259-53994278 None:intergenic 35.0%
! AGTTATGTTTAAAGGTGTGG+TGG - chr2_2:53994553-53994572 Msa0258010:CDS 35.0%
!! AAAGGTGTGGTGGATAAAAT+TGG - chr2_2:53994563-53994582 Msa0258010:CDS 35.0%
GTTAAAATATTGTCTTGGGG+TGG - chr2_2:53994602-53994621 Msa0258010:CDS 35.0%
! AGATTGGTGTTCATGTTCTT+TGG - chr2_2:53994666-53994685 Msa0258010:CDS 35.0%
! GATTGGTGTTCATGTTCTTT+GGG - chr2_2:53994667-53994686 Msa0258010:CDS 35.0%
! TTCGCTTTGTTGTATGATGA+TGG - chr2_2:53994709-53994728 Msa0258010:CDS 35.0%
! TCGCTTTGTTGTATGATGAT+GGG - chr2_2:53994710-53994729 Msa0258010:CDS 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr2_2:53994887-53994906 Msa0258010:intron 35.0%
GATGATAAGGGAACATTTGT+CGG - chr2_2:53995756-53995775 Msa0258010:intron 35.0%
ACCTAACAAAGATTCAGCTA+GGG - chr2_2:53995794-53995813 Msa0258010:intron 35.0%
!!! AGCTTCAACGTTGGTTTTAA+TGG + chr2_2:53995838-53995857 None:intergenic 35.0%
TCAGTAATATTAACGGCTTC+TGG - chr2_2:53996006-53996025 Msa0258010:intron 35.0%
TTGAAACATTCTAGTGAGTG+TGG + chr2_2:53996244-53996263 None:intergenic 35.0%
AGCAAGGTTTCTGTTAATGT+TGG + chr2_2:53996367-53996386 None:intergenic 35.0%
AAAAGAAATTGTCCTACCTC+TGG - chr2_2:53996396-53996415 Msa0258010:intron 35.0%
!! AGAATCAAAGGGTGCTAAAT+TGG + chr2_2:53996430-53996449 None:intergenic 35.0%
! CAAGTTCTTTTCAATGGTGT+TGG - chr2_2:53996522-53996541 Msa0258010:intron 35.0%
! GTTAGGAAGTATAGTAGAGA+TGG - chr2_2:53996561-53996580 Msa0258010:intron 35.0%
TGAGATCAGAAAGAATTGCA+GGG - chr2_2:53996659-53996678 Msa0258010:CDS 35.0%
CATAAAGGTTGACTAGATCT+TGG - chr2_2:53996826-53996845 Msa0258010:exon 35.0%
! ATCTAGCTTGAAGCTACCAA+TGG + chr2_2:53994105-53994124 None:intergenic 40.0%
CGCAGAAAGTTGTGCATTAA+TGG + chr2_2:53994207-53994226 None:intergenic 40.0%
CGCACAATAGTTTGGAGATT+AGG + chr2_2:53994251-53994270 None:intergenic 40.0%
TATCAAAAATGAAGCCCGGA+TGG - chr2_2:53994289-53994308 Msa0258010:CDS 40.0%
ATCAAAAATGAAGCCCGGAT+GGG - chr2_2:53994290-53994309 Msa0258010:CDS 40.0%
GGTGGATAAAATTGGTGTAG+TGG - chr2_2:53994571-53994590 Msa0258010:CDS 40.0%
ACAGGGACTAAAAATGCTGA+TGG - chr2_2:53994919-53994938 Msa0258010:intron 40.0%
! TGTGATTTGTCGTCTGCTTT+CGG - chr2_2:53995244-53995263 Msa0258010:intron 40.0%
TAGCGTCAATGTTACTGATC+AGG - chr2_2:53995392-53995411 Msa0258010:intron 40.0%
TTTGTCGGTGAGAAAAATGC+TGG - chr2_2:53995771-53995790 Msa0258010:intron 40.0%
GACCTAACAAAGATTCAGCT+AGG - chr2_2:53995793-53995812 Msa0258010:intron 40.0%
CCTAACAAAGATTCAGCTAG+GGG - chr2_2:53995795-53995814 Msa0258010:intron 40.0%
TTTGCAAGAAGCTTCAACGT+TGG + chr2_2:53995847-53995866 None:intergenic 40.0%
AATATCTGCACAAGAGACAG+TGG + chr2_2:53995871-53995890 None:intergenic 40.0%
AACTAGAGATGGAATAGCAC+TGG - chr2_2:53995902-53995921 Msa0258010:intron 40.0%
ACATTCTAGTGAGTGTGGAT+AGG + chr2_2:53996239-53996258 None:intergenic 40.0%
AATGACCTTACAGTCCTTTC+TGG - chr2_2:53996282-53996301 Msa0258010:intron 40.0%
GTTGGAGTGACAGAATCAAA+GGG + chr2_2:53996441-53996460 None:intergenic 40.0%
AGTTGGAGTGACAGAATCAA+AGG + chr2_2:53996442-53996461 None:intergenic 40.0%
GTGAGATCAGAAAGAATTGC+AGG - chr2_2:53996658-53996677 Msa0258010:CDS 40.0%
!! GCAGGGTTGTGAATTGATTT+TGG - chr2_2:53996676-53996695 Msa0258010:CDS 40.0%
TTACAGGGTCTAGGTCATAA+AGG - chr2_2:53996811-53996830 Msa0258010:CDS 40.0%
CTTCATTTGCTTCCCTCCAT+TGG - chr2_2:53994086-53994105 Msa0258010:three_prime_UTR 45.0%
AGCTTGAAGCTACCAATGGA+GGG + chr2_2:53994101-53994120 None:intergenic 45.0%
TAGCTTGAAGCTACCAATGG+AGG + chr2_2:53994102-53994121 None:intergenic 45.0%
TCAAAAATGAAGCCCGGATG+GGG - chr2_2:53994291-53994310 Msa0258010:CDS 45.0%
CGTCAATGTTACTGATCAGG+AGG - chr2_2:53995395-53995414 Msa0258010:intron 45.0%
TACTGTACTCACTATGGAGC+AGG + chr2_2:53995573-53995592 None:intergenic 45.0%
CCCCTAGCTGAATCTTTGTT+AGG + chr2_2:53995798-53995817 None:intergenic 45.0%
CTAGCACTTGCAACTAGAGA+TGG - chr2_2:53995891-53995910 Msa0258010:intron 45.0%
CTTGCATCTCTTCTTCCTAG+TGG + chr2_2:53996165-53996184 None:intergenic 45.0%
CAGAAGATGGTCCAGGAATT+TGG + chr2_2:53996215-53996234 None:intergenic 45.0%
AGTGTGGATAGGTCAGAAGA+TGG + chr2_2:53996228-53996247 None:intergenic 45.0%
! TTTCTGGTGCACACACCATA+GGG - chr2_2:53996298-53996317 Msa0258010:intron 45.0%
TTGACACTCAGTTTGCCCTA+TGG + chr2_2:53996316-53996335 None:intergenic 45.0%
AGAAATTGTCCTACCTCTGG+TGG - chr2_2:53996399-53996418 Msa0258010:intron 45.0%
!! TAAATTGGTGTCACCACCAG+AGG + chr2_2:53996415-53996434 None:intergenic 45.0%
TAGAGACTTTGCTGCTGCTA+TGG - chr2_2:53996596-53996615 Msa0258010:intron 45.0%
TAGTCCTCTTACTGGGACTA+AGG - chr2_2:53996635-53996654 Msa0258010:CDS 45.0%
AGTCCTCTTACTGGGACTAA+GGG - chr2_2:53996636-53996655 Msa0258010:CDS 45.0%
!!! TTAATTAAGTTTTTTTTTAT+AGG + chr2_2:53994773-53994792 None:intergenic 5.0%
!! ATATATAAATATATAAACTA+GGG - chr2_2:53995966-53995985 Msa0258010:intron 5.0%
CAAAAATGAAGCCCGGATGG+GGG - chr2_2:53994292-53994311 Msa0258010:CDS 50.0%
AAGTATAGAAGCCCCCATCC+GGG + chr2_2:53994306-53994325 None:intergenic 50.0%
GAAGTATAGAAGCCCCCATC+CGG + chr2_2:53994307-53994326 None:intergenic 50.0%
TATAGCTTGGAGGACCCTCA+TGG - chr2_2:53996133-53996152 Msa0258010:intron 50.0%
CCTAGTGGTACTGTCCATGA+GGG + chr2_2:53996150-53996169 None:intergenic 50.0%
TCCTAGTGGTACTGTCCATG+AGG + chr2_2:53996151-53996170 None:intergenic 50.0%
GCAGCAAACAGCCAAATTCC+TGG - chr2_2:53996201-53996220 Msa0258010:intron 50.0%
GATAGGTCAGAAGATGGTCC+AGG + chr2_2:53996222-53996241 None:intergenic 50.0%
GTGCACCAGAAAGGACTGTA+AGG + chr2_2:53996290-53996309 None:intergenic 50.0%
CTATGGTGTGTGCACCAGAA+AGG + chr2_2:53996299-53996318 None:intergenic 50.0%
! CTTTCTGGTGCACACACCAT+AGG - chr2_2:53996297-53996316 Msa0258010:intron 50.0%
TCACCCTTAGTCCCAGTAAG+AGG + chr2_2:53996642-53996661 None:intergenic 50.0%
CCCTCATGGACAGTACCACT+AGG - chr2_2:53996147-53996166 Msa0258010:intron 55.0%
!! TTGGTGTCACCACCAGAGGT+AGG + chr2_2:53996411-53996430 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 53994064 53996915 53994064 ID=Msa0258010;Name=Msa0258010
chr2_2 mRNA 53994064 53996915 53994064 ID=Msa0258010-mRNA-1;Parent=Msa0258010;Name=Msa0258010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=79|1|1|1|1|1|3|223|319
chr2_2 exon 53994064 53994841 53994064 ID=Msa0258010-mRNA-1:exon:16270;Parent=Msa0258010-mRNA-1
chr2_2 exon 53995056 53995247 53995056 ID=Msa0258010-mRNA-1:exon:16269;Parent=Msa0258010-mRNA-1
chr2_2 exon 53996624 53996915 53996624 ID=Msa0258010-mRNA-1:exon:16268;Parent=Msa0258010-mRNA-1
chr2_2 five_prime_UTR 53996837 53996915 53996837 ID=Msa0258010-mRNA-1:five_prime_utr;Parent=Msa0258010-mRNA-1
chr2_2 CDS 53996624 53996836 53996624 ID=Msa0258010-mRNA-1:cds;Parent=Msa0258010-mRNA-1
chr2_2 CDS 53995056 53995247 53995056 ID=Msa0258010-mRNA-1:cds;Parent=Msa0258010-mRNA-1
chr2_2 CDS 53994287 53994841 53994287 ID=Msa0258010-mRNA-1:cds;Parent=Msa0258010-mRNA-1
chr2_2 three_prime_UTR 53994064 53994286 53994064 ID=Msa0258010-mRNA-1:three_prime_utr;Parent=Msa0258010-mRNA-1
Gene Sequence

>Msa0258010

ATGGCCACCTTGATTACACTCTTTGTTACACTCTCTATTTGTTCTCTCTTAGCTTGTTCAACCATTAATGCACAACTTTCTGCGAACTTCTATGCAAGAACTTGTCCTAATCTCCAAACTATTGTGCGCAATGAAATGATCAAAGTTATCAAAAATGAAGCCCGGATGGGGGCTTCTATACTTCGCTTGTTCTTCCATGATTGCTTTGTAAATGGATGTGATGCATCAATCTTATTGGATGATAAGGGAACATTTGTCGGTGAGAAAAATGCTGGACCTAACAAAGATTCAGCTAGGGGTTTTGAAGTGATTGATACCATTAAAACCAACGTTGAAGCTTCTTGCAAAGCCACTGTCTCTTGTGCAGATATTCTAGCACTTGCAACTAGAGATGGAATAGCACTGCTTGGAGGACCCTCATGGACAGTACCACTAGGAAGAAGAGATGCAAGAACAGCAAGTCAAAGTGCAGCAAACAGCCAAATTCCTGGACCATCTTCTGACCTATCCACACTCACTAGAATGTTTCAAAACAAAAGTTTAACATTAAATGACCTTACAGTCCTTTCTGGTGCACACACCATAGGGCAAACTGAGTGTCAATTTTTTAGAAATCGCATACACAATGAAGCCAACATTAACAGAAACCTTGCTAACTTAAGAAAAAGAAATTGTCCTACCTCTGGTGGTGACACCAATTTAGCACCCTTTGATTCTGTCACTCCAACTAAATTTGACAACAATTATTATAAGGACCTTATTGCTAATAAAGGTCTTTTACACTCTGATCAAGTTCTTTTCAATGGTGTTGGTTCTCAAATTTCTTTGGTTAGGAAGTATAGTAGAGATGGTGCTGCTTTTTCTAGAGACTTTGCTGCTGCTATGGTGAAGATGAGTAAAATTAGTCCTCTTACTGGGACTAAGGGTGAGATCAGAAAGAATTGCAGGGTTGTGAATTGA
Protein sequence

>Msa0258010

MATLITLFVTLSICSLLACSTINAQLSANFYARTCPNLQTIVRNEMIKVIKNEARMGASILRLFFHDCFVNGCDASILLDDKGTFVGEKNAGPNKDSARGFEVIDTIKTNVEASCKATVSCADILALATRDGIALLGGPSWTVPLGRRDARTASQSAANSQIPGPSSDLSTLTRMFQNKSLTLNDLTVLSGAHTIGQTECQFFRNRIHNEANINRNLANLRKRNCPTSGGDTNLAPFDSVTPTKFDNNYYKDLIANKGLLHSDQVLFNGVGSQISLVRKYSRDGAAFSRDFAAAMVKMSKISPLTGTKGEIRKNCRVVN*