AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0028550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0028550 MtrunA17_Chr1g0185141 96.919 1071 32 1 1 1070 1 1071 0.0 2172
Msa0028550 MtrunA17_Chr1g0150781 33.478 230 98 7 226 446 368 551 1.66e-23 106
Msa0028550 MtrunA17_Chr3g0135961 32.589 224 96 6 226 440 364 541 2.29e-23 105
Msa0028550 MtrunA17_Chr4g0070871 31.897 232 96 8 225 442 324 507 5.71e-22 101
Msa0028550 MtrunA17_Chr3g0112291 32.301 226 90 6 226 438 200 375 1.78e-21 98.2
Msa0028550 MtrunA17_Chr1g0150451 28.740 254 123 6 183 436 126 321 2.05e-21 97.1
Msa0028550 MtrunA17_Chr5g0396731 32.432 222 97 5 226 440 177 352 3.22e-21 96.7
Msa0028550 MtrunA17_Chr3g0136711 27.953 254 125 6 183 436 83 278 5.82e-21 94.7
Msa0028550 MtrunA17_Chr1g0158781 39.735 151 81 6 300 444 240 386 3.70e-20 94.0
Msa0028550 MtrunA17_Chr2g0299981 25.389 386 195 15 72 440 228 537 5.61e-19 92.0
Msa0028550 MtrunA17_Chr8g0389921 30.415 217 103 5 226 440 266 436 2.02e-18 89.7
Msa0028550 MtrunA17_Chr3g0105371 31.737 167 103 5 275 441 186 341 6.08e-17 83.6
Msa0028550 MtrunA17_Chr1g0212961 29.958 237 104 9 200 436 161 335 1.07e-16 83.2
Msa0028550 MtrunA17_Chr3g0105351 25.100 251 130 7 198 441 118 317 1.30e-16 82.4
Msa0028550 MtrunA17_Chr6g0483411 24.540 326 153 8 71 396 51 283 1.02e-15 79.7
Msa0028550 MtrunA17_Chr3g0126511 27.642 246 120 6 200 445 160 347 2.22e-15 79.3
Msa0028550 MtrunA17_Chr5g0430481 22.193 374 162 10 71 441 130 377 7.99e-14 74.7
Msa0028550 MtrunA17_Chr6g0486661 31.364 220 80 10 225 414 185 363 6.74e-12 70.1
Msa0028550 MtrunA17_Chr2g0317021 28.241 216 94 9 226 439 177 333 3.86e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0028550 AT3G63340.7 55.766 1058 408 15 24 1068 30 1040 0.0 1152
Msa0028550 AT3G63340.5 55.702 1061 403 17 24 1068 30 1039 0.0 1149
Msa0028550 AT3G63340.1 55.702 1061 403 17 24 1068 30 1039 0.0 1149
Msa0028550 AT3G63340.2 54.079 1091 408 16 24 1068 30 1073 0.0 1136
Msa0028550 AT3G63340.8 54.942 1032 398 17 24 1039 30 1010 0.0 1098
Msa0028550 AT3G63340.6 54.829 1025 396 17 24 1032 30 1003 0.0 1086
Msa0028550 AT3G63340.3 54.829 1025 396 17 24 1032 30 1003 0.0 1086
Msa0028550 AT3G63340.10 54.829 1025 396 17 24 1032 30 1003 0.0 1086
Msa0028550 AT3G63340.4 54.829 1025 396 17 24 1032 30 1003 0.0 1086
Msa0028550 AT3G63340.11 52.009 871 352 16 24 878 30 850 0.0 848
Msa0028550 AT3G63340.9 65.641 390 117 4 679 1068 2 374 2.66e-178 525
Msa0028550 AT3G63340.12 56.054 446 174 6 24 457 30 465 1.06e-162 491
Msa0028550 AT3G63320.1 57.265 351 126 4 90 440 56 382 1.71e-125 390
Msa0028550 AT3G63320.2 56.522 322 117 3 119 440 1 299 1.26e-112 354
Msa0028550 AT5G57050.2 32.296 257 113 8 200 442 166 375 2.42e-24 107
Msa0028550 AT5G57050.1 32.296 257 113 8 200 442 206 415 5.03e-24 106
Msa0028550 AT4G26080.1 28.086 324 151 10 145 439 153 423 2.54e-22 101
Msa0028550 AT1G72770.4 32.258 248 105 10 205 440 307 503 7.84e-22 101
Msa0028550 AT1G72770.1 32.258 248 105 10 205 440 307 503 7.84e-22 101
Msa0028550 AT1G72770.3 32.258 248 105 10 205 440 307 503 7.84e-22 101
Msa0028550 AT5G24940.1 31.381 239 102 8 200 436 99 277 8.18e-21 97.4
Msa0028550 AT4G31750.2 28.044 271 135 7 183 453 82 292 1.12e-20 94.7
Msa0028550 AT4G31750.1 28.044 271 135 7 183 453 82 292 1.75e-20 94.0
Msa0028550 AT4G31750.3 28.044 271 135 7 183 453 82 292 1.75e-20 94.0
Msa0028550 AT5G10740.1 29.958 237 108 6 200 436 99 277 3.16e-20 94.4
Msa0028550 AT5G10740.2 29.958 237 108 6 200 436 99 277 3.16e-20 94.4
Msa0028550 AT5G51760.2 33.043 230 94 6 225 440 200 383 8.22e-20 93.6
Msa0028550 AT1G17550.1 31.278 227 95 8 226 440 326 503 8.84e-20 94.7
Msa0028550 AT1G17550.2 31.278 227 95 8 226 440 326 503 8.84e-20 94.7
Msa0028550 AT5G51760.1 33.043 230 94 6 225 440 230 413 1.38e-19 93.2
Msa0028550 AT2G29380.1 32.883 222 89 7 226 438 190 360 1.44e-19 92.4
Msa0028550 AT5G59220.1 36.000 175 62 6 226 400 221 345 3.78e-19 91.7
Msa0028550 AT1G43900.1 28.333 240 113 6 200 439 189 369 7.73e-19 90.1
Msa0028550 AT1G07430.1 33.714 175 66 5 226 400 233 357 8.45e-18 88.2
Msa0028550 AT1G07160.1 24.583 240 128 5 199 438 190 376 1.95e-17 86.3
Msa0028550 AT3G11410.1 34.286 175 65 5 226 400 221 345 1.99e-16 83.2
Msa0028550 AT2G34740.1 30.698 215 87 7 225 436 177 332 9.74e-15 77.4
Msa0028550 AT2G30020.1 31.250 144 85 4 301 441 263 395 1.15e-14 77.8
Msa0028550 AT2G40180.1 25.820 244 124 8 199 441 201 388 1.40e-14 77.4
Msa0028550 AT1G67820.2 30.570 193 81 5 196 388 153 292 5.80e-14 75.9
Msa0028550 AT1G67820.1 30.570 193 81 5 196 388 189 328 8.16e-14 75.5
Msa0028550 AT4G28400.3 26.512 215 97 7 226 438 105 260 4.33e-12 68.2
Msa0028550 AT4G28400.1 26.512 215 97 7 226 438 127 282 6.57e-12 68.2
Msa0028550 AT1G03590.1 26.601 203 101 4 200 393 159 322 6.03e-11 66.6
Msa0028550 AT1G34750.2 29.767 215 90 9 226 438 126 281 7.30e-11 64.7
Msa0028550 AT1G34750.1 29.767 215 90 9 226 438 126 281 7.30e-11 64.7
Msa0028550 AT1G34750.3 29.767 215 90 9 226 438 126 281 7.30e-11 64.7

Find 287 sgRNAs with CRISPR-Local

Find 982 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAATCCCTGGGGTTTC+TGG 0.128881 1_1:+53536399 Msa0028550:CDS
CTATCATCAGTCCATTATTT+TGG 0.155114 1_1:-53538443 None:intergenic
GCTAGAGATCCTCTTAAAAT+AGG 0.177908 1_1:+53537482 Msa0028550:CDS
GCATTTATCTGGAAAATATT+TGG 0.181104 1_1:-53535952 None:intergenic
CTCCTGCACAATTATCTTCT+TGG 0.186455 1_1:-53538098 None:intergenic
TGCTTTAACACGTGCTCTTT+TGG 0.206321 1_1:+53535972 Msa0028550:CDS
TTTGGTCGTATCGGTTATTT+TGG 0.209957 1_1:-53538469 None:intergenic
ATGCTTCTACTGGGCCTTCT+AGG 0.241354 1_1:+53535567 Msa0028550:CDS
GTTCAAACCTTCTTCATATA+TGG 0.241764 1_1:-53532340 None:intergenic
GATGCAGGTTTCCCATTATT+TGG 0.255370 1_1:+53527549 Msa0028550:CDS
TCTTGGCGGAGGTTGGAAAT+AGG 0.265002 1_1:-53538081 None:intergenic
ATTAGGTGCAATGGGGATTA+AGG 0.266498 1_1:+53525359 Msa0028550:intron
GAAGTGAAACATGGTGATTT+TGG 0.270964 1_1:+53529348 Msa0028550:CDS
GGTTGCAGATGATAAAATTT+TGG 0.273866 1_1:+53526385 Msa0028550:CDS
ATCAGAAAATCTTGGTGATT+TGG 0.274395 1_1:+53529383 Msa0028550:CDS
ATCCCTAGTCAATTCCTTTA+CGG 0.281821 1_1:-53526785 None:intergenic
AGGAAATGCGCAACCTTATC+TGG 0.283971 1_1:+53532577 Msa0028550:CDS
CTGGTGGTCAAGTTCTAAAT+TGG 0.286126 1_1:+53526851 Msa0028550:CDS
AACCAACGCCACCACTTTGA+TGG 0.287978 1_1:-53532531 None:intergenic
GTGATGTTAGAGATGGTCTT+AGG 0.291313 1_1:+53535925 Msa0028550:CDS
AAGTCAAAAGAAAATGTTTA+CGG 0.303789 1_1:+53538674 Msa0028550:three_prime_UTR
AAGCATCACACTGCGGCTAT+AGG 0.305351 1_1:+53538279 Msa0028550:three_prime_UTR
TCAATTCCTTTACATGATAC+TGG 0.307213 1_1:+53529756 Msa0028550:CDS
GGCGGTTTGCCTCGCGTAAA+TGG 0.311764 1_1:+53526874 Msa0028550:CDS
TTGGCGACGTGTTCTTTAAA+AGG 0.312314 1_1:+53526920 Msa0028550:CDS
CCTCTTTATTAAAGCTATAT+AGG 0.315202 1_1:+53526680 Msa0028550:CDS
TGGTCGTTGTACAAAATTAC+AGG 0.316460 1_1:-53529639 None:intergenic
TTTCAGACATCTGGGCTTTA+CGG 0.320626 1_1:+53537610 Msa0028550:CDS
TTGCTCAAGTCTTTCGTTCT+CGG 0.321277 1_1:-53532484 None:intergenic
AACTTGGTATCTGGCAGATT+AGG 0.330954 1_1:-53528728 None:intergenic
ATTCCACATATCTTGCAATA+TGG 0.333093 1_1:-53532362 None:intergenic
ATTCGCTTAAACTTGGTATC+TGG 0.334439 1_1:-53528737 None:intergenic
AGTCCCGGTCCAATGAAATA+TGG 0.334535 1_1:+53532391 Msa0028550:CDS
CTTGGCGGAGGTTGGAAATA+GGG 0.336263 1_1:-53538080 None:intergenic
TACTTCAAAGTTGAGCTTGA+TGG 0.339445 1_1:-53535749 None:intergenic
AAGCATTTATATGCTTCTAC+TGG 0.351239 1_1:+53535557 Msa0028550:CDS
AGAAGAACAAGACTACTTAT+AGG 0.354509 1_1:+53538493 Msa0028550:three_prime_UTR
ATAAAACTGGCAAAGCCTTC+AGG 0.357027 1_1:-53529720 None:intergenic
ACTTGGTATCTGGCAGATTA+GGG 0.357697 1_1:-53528727 None:intergenic
GGCTGCCAATCAGTCACTTC+TGG 0.361010 1_1:-53527252 None:intergenic
AGATAAATTTACCTTGAATC+AGG 0.361118 1_1:-53529810 None:intergenic
AAGTGCTTTCTAATCATGTT+TGG 0.362512 1_1:-53524786 None:intergenic
GATTCCTGCAGACCAAATAA+TGG 0.365171 1_1:-53527561 None:intergenic
TAGCTATCGTTAGCAGTTAG+AGG 0.367958 1_1:-53527273 None:intergenic
ACGACATGTAGCCAAAATAA+TGG 0.369058 1_1:+53538432 Msa0028550:three_prime_UTR
AAAGGGCAGTATGGACAATA+TGG 0.370563 1_1:+53527452 Msa0028550:CDS
CAAAGCATGCAAAGCTCATC+TGG 0.371812 1_1:-53538542 None:intergenic
ATAAATAGTTTACCGGGAAA+TGG 0.373233 1_1:-53525059 None:intergenic
CACGTGTTAAAGCATTTATC+TGG 0.375022 1_1:-53535963 None:intergenic
AGGATTTATGCATTGGTCAT+TGG 0.376552 1_1:-53529700 None:intergenic
TGGTGGTCAAGTTCTAAATT+GGG 0.378816 1_1:+53526852 Msa0028550:CDS
ACCATTTGGTTTGGCGCAAT+CGG 0.379352 1_1:+53524674 Msa0028550:five_prime_UTR
GATCTTCGCATTCCATTTCC+CGG 0.384363 1_1:+53525047 Msa0028550:CDS
AGTGCTTTCTAATCATGTTT+GGG 0.384660 1_1:-53524785 None:intergenic
AAGCACTTCTTCATCGCGTT+AGG 0.394880 1_1:+53524801 Msa0028550:CDS
TCAGGTGAAAACAGAAGTTT+TGG 0.396522 1_1:-53529659 None:intergenic
AGCATCACACTGCGGCTATA+GGG 0.397198 1_1:+53538280 Msa0028550:three_prime_UTR
GGAAGTTGTGGTTGGGATTG+TGG 0.398144 1_1:+53525380 Msa0028550:CDS
ATTATTCAATGCCTGATTCA+AGG 0.401088 1_1:+53529799 Msa0028550:CDS
TAGTGCGCCATCTGCTTATG+TGG 0.402017 1_1:+53537634 Msa0028550:CDS
GGCGCGGATACCATTTGGTT+TGG 0.402681 1_1:+53524665 Msa0028550:five_prime_UTR
AACAGAACATTTAATCCAAA+TGG 0.402745 1_1:-53538643 None:intergenic
TACCAAGTTTAAGCGAATAA+TGG 0.403865 1_1:+53528742 Msa0028550:CDS
ATGATACTGGTTCAGATAAC+AGG 0.403949 1_1:+53529769 Msa0028550:CDS
AGCCTTGGAGTCTCCAATAT+TGG 0.405985 1_1:-53526411 None:intergenic
TCTAGGAATAACCTTCATTC+AGG 0.406387 1_1:+53526341 Msa0028550:CDS
CAAAATAATGGACTGATGAT+AGG 0.410483 1_1:+53538444 Msa0028550:three_prime_UTR
TGCTTTGAAGATCCAGAGTC+AGG 0.410523 1_1:+53534175 Msa0028550:CDS
GGCAGCAGTTGTTGTTCCTC+TGG 0.410760 1_1:+53527473 Msa0028550:CDS
CAGTGTGATGCTTCAGTAGC+AGG 0.414474 1_1:-53538269 None:intergenic
CGTATTATTGACTTTGGAAG+TGG 0.414780 1_1:+53535515 Msa0028550:CDS
TATGTATTAAAGAGGAGTTT+TGG 0.415898 1_1:+53530072 Msa0028550:CDS
GTAGCATTTAGCAAAGCTTC+AGG 0.416085 1_1:-53535713 None:intergenic
ATCTACAGCAACAGTTGTAT+TGG 0.416406 1_1:+53526364 Msa0028550:CDS
TCAAAATATAGACACCTAAC+AGG 0.417653 1_1:+53538518 Msa0028550:three_prime_UTR
GGCACTCACAGAACAAATAC+TGG 0.418350 1_1:+53524644 Msa0028550:five_prime_UTR
TCGACAGGAACATTGCTTCA+TGG 0.419963 1_1:+53525525 Msa0028550:CDS
CTCAAGTAATCCTGAGTGTC+AGG 0.422575 1_1:+53530197 Msa0028550:CDS
TTCAAGAAGACCAATAAAAC+TGG 0.423014 1_1:-53529733 None:intergenic
TTTCCCATTATTTGGTCTGC+AGG 0.423374 1_1:+53527557 Msa0028550:CDS
GTTCTTTCATCCTCTCTGTC+TGG 0.423470 1_1:-53526814 None:intergenic
CTAGAGATCCTCTTAAAATA+GGG 0.423911 1_1:+53537483 Msa0028550:CDS
CATAGACGGAAAGAGATGTT+AGG 0.425807 1_1:+53525576 Msa0028550:CDS
CGGCAAAATTAGTGAGCCCT+TGG 0.426084 1_1:-53526765 None:intergenic
GAATACAAGCCATATTTCAT+TGG 0.428140 1_1:-53532400 None:intergenic
ATACTGGCGCGGATACCATT+TGG 0.430949 1_1:+53524660 Msa0028550:five_prime_UTR
TTGGCTATAACACGGGCTAT+TGG 0.432011 1_1:+53526901 Msa0028550:CDS
GAATTCTTCAGAGCATTTCC+AGG 0.434830 1_1:-53537441 None:intergenic
AAGACTTGAGCAAGTGAAAC+AGG 0.436937 1_1:+53532494 Msa0028550:CDS
GATGTTTGATTAGGTGCAAT+GGG 0.439760 1_1:+53525351 Msa0028550:intron
TACCATTATTCGCTTAAACT+TGG 0.442960 1_1:-53528744 None:intergenic
CTAAATGCTACATGGTATCA+AGG 0.445631 1_1:+53535725 Msa0028550:CDS
CGACAGGAACATTGCTTCAT+GGG 0.445851 1_1:+53525526 Msa0028550:CDS
GAATCCTCTACAGCTGCATA+TGG 0.449472 1_1:+53538179 Msa0028550:three_prime_UTR
AGCCTTCAGGATTTATGCAT+TGG 0.450173 1_1:-53529707 None:intergenic
TGTAGGCGTATTATTGACTT+TGG 0.450655 1_1:+53535509 Msa0028550:intron
GTGGATCATATGGTGAAGTA+TGG 0.450731 1_1:+53530097 Msa0028550:CDS
AAAGCTCATCTGGTCCTGTT+AGG 0.452914 1_1:-53538532 None:intergenic
AGCGCCACCGTGTTTGTAAA+CGG 0.454314 1_1:-53524883 None:intergenic
TTTGAAGATGTGCTGTTGGC+TGG 0.454563 1_1:+53532240 Msa0028550:CDS
ATTATCTTCTTGGCGGAGGT+TGG 0.456172 1_1:-53538088 None:intergenic
TTCAAGCATCTCCCTGACTC+TGG 0.456959 1_1:-53534187 None:intergenic
TCAGAGCATTTCCAGGATGC+AGG 0.459218 1_1:-53537434 None:intergenic
ATGTACAGGGTGTAGTTAGA+AGG 0.459269 1_1:-53530225 None:intergenic
ATTCCTGCAGACCAAATAAT+GGG 0.461614 1_1:-53527560 None:intergenic
TTCTCACCTTTAGCCTCCTT+AGG 0.462469 1_1:-53526461 None:intergenic
CTGGCAGATTAGGGTGCTCC+AGG 0.462532 1_1:-53528718 None:intergenic
GCTTGTTGATGAAGGGCATC+TGG 0.462663 1_1:-53529474 None:intergenic
CACAATTATCTTCTTGGCGG+AGG 0.462902 1_1:-53538092 None:intergenic
GCTTACCAGCTTGTTGATGA+AGG 0.463639 1_1:-53529482 None:intergenic
GATGCATTCAGTGATGTGTT+TGG 0.464990 1_1:-53538306 None:intergenic
GGGATTAAGGAAGTTGTGGT+TGG 0.467601 1_1:+53525372 Msa0028550:CDS
CCTATATAGCTTTAATAAAG+AGG 0.469166 1_1:-53526680 None:intergenic
TTCTAATCATGTTTGGGATG+AGG 0.471862 1_1:-53524779 None:intergenic
TCCGATTGCGCCAAACCAAA+TGG 0.474239 1_1:-53524675 None:intergenic
AGAAAATCTTGGTGATTTGG+TGG 0.474744 1_1:+53529386 Msa0028550:CDS
CTGATCTCATGTCACATAAA+CGG 0.475305 1_1:-53527371 None:intergenic
GCGCAACCTTATCTGGCAAC+TGG 0.476012 1_1:+53532584 Msa0028550:CDS
GATGGCGTCAAAATTATTGA+TGG 0.476159 1_1:+53525440 Msa0028550:CDS
CGACAGACTTAGATCGTTCA+TGG 0.476521 1_1:+53536368 Msa0028550:intron
GGTTAAGCATGTGGATGATT+CGG 0.477227 1_1:-53524862 None:intergenic
GGATGAGGAACTGAAAATTG+AGG 0.477839 1_1:-53524764 None:intergenic
TATGTATTGTAAGAAAGAAC+GGG 0.481103 1_1:+53538593 Msa0028550:three_prime_UTR
GAAGGGCATCTGGTATAGGC+TGG 0.481769 1_1:-53529464 None:intergenic
AACTGCTAACGATAGCTACT+TGG 0.481960 1_1:+53527278 Msa0028550:CDS
GAATTGTGCATCTTAATCCC+TGG 0.482370 1_1:+53536390 Msa0028550:CDS
TGATGAAGGGCATCTGGTAT+AGG 0.485113 1_1:-53529468 None:intergenic
TTGGAGTTTCGCCTGCATCC+TGG 0.489711 1_1:+53537423 Msa0028550:CDS
GGGTCTGCTGTGTACTTAAG+TGG 0.490131 1_1:+53532168 Msa0028550:CDS
AATTGTGCATCTTAATCCCT+GGG 0.493692 1_1:+53536391 Msa0028550:CDS
GCATCTTGAGGGCTGGAATG+AGG 0.494687 1_1:+53535999 Msa0028550:CDS
CTGCACAATTATCTTCTTGG+CGG 0.496279 1_1:-53538095 None:intergenic
AGCACTTCTTCATCGCGTTA+GGG 0.496565 1_1:+53524802 Msa0028550:CDS
TTCAGAGCACAAGAAAGCCT+TGG 0.496817 1_1:-53526426 None:intergenic
TGGCTTGTATTCAGTTATGA+AGG 0.497253 1_1:+53532411 Msa0028550:CDS
CTGCACCAGAAGTGACTGAT+TGG 0.497735 1_1:+53527247 Msa0028550:CDS
GAACCATATTGCAAGATATG+TGG 0.497814 1_1:+53532359 Msa0028550:CDS
TGCAATGCCTCGTCAACACT+TGG 0.499002 1_1:-53538053 None:intergenic
TGGATCGGCATCTTGAGGGC+TGG 0.499128 1_1:+53535992 Msa0028550:CDS
GACATACCAGTTGCCAGATA+AGG 0.499331 1_1:-53532590 None:intergenic
TACTTGGTGGCTGCATCTGA+TGG 0.499430 1_1:+53527294 Msa0028550:CDS
GAATCTGCTTACAGAAGCTC+AGG 0.499613 1_1:+53527579 Msa0028550:CDS
TTATACGTTTCAAAATGTAC+AGG 0.500478 1_1:-53530239 None:intergenic
CACCTCTGATCGATTGCACC+TGG 0.502161 1_1:+53528700 Msa0028550:CDS
AGCTACATTGTGCAAATACA+TGG 0.503285 1_1:+53538370 Msa0028550:three_prime_UTR
TGATGTTAGAGATGGTCTTA+GGG 0.503989 1_1:+53535926 Msa0028550:CDS
TGTACTGAACAGGTAGAGAA+AGG 0.507240 1_1:+53532147 Msa0028550:intron
TGGTTGAAAACAACAGAAGA+AGG 0.507783 1_1:+53532549 Msa0028550:CDS
GGATTAAGGAAGTTGTGGTT+GGG 0.510198 1_1:+53525373 Msa0028550:CDS
CATCTTGAGGGCTGGAATGA+GGG 0.512226 1_1:+53536000 Msa0028550:CDS
TGGTCAGTTGGCTATAACAC+GGG 0.512647 1_1:+53526894 Msa0028550:CDS
CGCCAAGAAGATAATTGTGC+AGG 0.513514 1_1:+53538096 Msa0028550:exon
GAGTAGCTGCCAGAAACCCC+AGG 0.513588 1_1:-53536408 None:intergenic
CTTCATTGATAGTTGAACTC+AGG 0.513812 1_1:-53529677 None:intergenic
AGGGGATTGTTGCGGAGAGG+AGG 0.515331 1_1:-53524830 None:intergenic
GTGCTTTGAAGATGTGCTGT+TGG 0.522383 1_1:+53532236 Msa0028550:CDS
TTACAAACACGGTGGCGCTC+CGG 0.522526 1_1:+53524887 Msa0028550:CDS
CAGTCTCCTAAGGAGGCTAA+AGG 0.524953 1_1:+53526455 Msa0028550:CDS
GTCCATCAAAGTGGTGGCGT+TGG 0.525148 1_1:+53532529 Msa0028550:CDS
AGTGAGGAATGATTACCGTT+AGG 0.529112 1_1:-53524707 None:intergenic
CAAAACAAATTTCGACTGCA+AGG 0.529137 1_1:+53532315 Msa0028550:CDS
TGCGGAGTGGCAACGAGTAG+TGG 0.531125 1_1:-53524973 None:intergenic
TTGCCGTAAAGGAATTGACT+AGG 0.531885 1_1:+53526782 Msa0028550:CDS
GCCTCGCGTAAATGGTCAGT+TGG 0.533001 1_1:+53526882 Msa0028550:CDS
ATATGTATTGTAAGAAAGAA+CGG 0.533443 1_1:+53538592 Msa0028550:three_prime_UTR
TTGAGCAAGTGAAACAGGTT+CGG 0.533800 1_1:+53532499 Msa0028550:CDS
CTTACCAGCTTGTTGATGAA+GGG 0.534667 1_1:-53529481 None:intergenic
GTGATTTGGTGGATTCTAAG+TGG 0.534844 1_1:+53529397 Msa0028550:CDS
TGATGTTTGATTAGGTGCAA+TGG 0.535874 1_1:+53525350 Msa0028550:intron
TGCTTAACCGTTTACAAACA+CGG 0.536233 1_1:+53524876 Msa0028550:CDS
TGCCGTAAAGGAATTGACTA+GGG 0.538228 1_1:+53526783 Msa0028550:CDS
TGAGCAATAAGATACCTAGA+AGG 0.538448 1_1:-53535581 None:intergenic
AAACTATGAAGGAAGCCTCT+AGG 0.538727 1_1:+53526324 Msa0028550:intron
GGCAAAATTAGTGAGCCCTT+GGG 0.540691 1_1:-53526764 None:intergenic
AAGGGCATCTGGTATAGGCT+GGG 0.541611 1_1:-53529463 None:intergenic
TACAGATTAGCTTCTTCCCA+AGG 0.542089 1_1:+53526748 Msa0028550:CDS
AGAACTCGTGTGGAAGCTGC+TGG 0.542286 1_1:+53526832 Msa0028550:CDS
GGGTTTCTCTCTAAATCTAA+AGG 0.543016 1_1:+53538244 Msa0028550:three_prime_UTR
TGATGGTTCTGTTTCTGTGT+GGG 0.546242 1_1:+53526714 Msa0028550:CDS
CAAGCCATATTTCATTGGAC+CGG 0.546801 1_1:-53532395 None:intergenic
ATCATATGGTGAAGTATGGT+TGG 0.546846 1_1:+53530101 Msa0028550:CDS
CTGTGTACTTAAGTGGGCTG+AGG 0.547798 1_1:+53532175 Msa0028550:CDS
TTTGGGGATTGGAACACCGC+CGG 0.552404 1_1:-53524906 None:intergenic
TCTGAACCAGTATCATGTAA+AGG 0.554413 1_1:-53529762 None:intergenic
CCATCTGCTTATGTGGGACC+CGG 0.555390 1_1:+53537641 Msa0028550:CDS
AGATGTCTGTGATTTGTTGT+GGG 0.556957 1_1:+53527341 Msa0028550:CDS
ATGTAAACGTATTGCATAGA+CGG 0.557005 1_1:+53525562 Msa0028550:CDS
TGCTAACGATAGCTACTTGG+TGG 0.559456 1_1:+53527281 Msa0028550:CDS
AAGATGTCTGTGATTTGTTG+TGG 0.560429 1_1:+53527340 Msa0028550:CDS
GTTATATCGAAAGCTTCGAC+AGG 0.561902 1_1:+53525510 Msa0028550:CDS
CAAGGAGCCATATATGAAGA+AGG 0.563211 1_1:+53532333 Msa0028550:CDS
TACACTGAAAACGAGGATGC+AGG 0.564296 1_1:+53527534 Msa0028550:CDS
GGAACATTGCTTCATGGGAA+AGG 0.564326 1_1:+53525531 Msa0028550:CDS
ACGGGAACAATATCAATGAC+AGG 0.568374 1_1:+53538611 Msa0028550:three_prime_UTR
CAGCACATCTTCAAAGCACA+TGG 0.569088 1_1:-53532232 None:intergenic
TCGATCAGAGGTGATACCAT+TGG 0.570089 1_1:-53528690 None:intergenic
GTACTGAACAGGTAGAGAAA+GGG 0.572856 1_1:+53532148 Msa0028550:intron
TGCCAATATTGGAGACTCCA+AGG 0.573506 1_1:+53526409 Msa0028550:CDS
GATGATTCGGCGTGAGTGAA+GGG 0.573961 1_1:-53524849 None:intergenic
CAAACACGGTGGCGCTCCGG+CGG 0.574240 1_1:+53524890 Msa0028550:CDS
TGGTGTTGTGATGTTAGAGA+TGG 0.574267 1_1:+53535918 Msa0028550:CDS
GAATGAGGGTGTGAAGGAGC+TGG 0.574520 1_1:+53536014 Msa0028550:CDS
TGCCACTCCGCAATGCTCCA+AGG 0.577663 1_1:+53524984 Msa0028550:CDS
GTGATCGAAGAGGTTCCAGC+GGG 0.578336 1_1:-53524934 None:intergenic
TGTGCAGGTATGTATTAAAG+AGG 0.587658 1_1:+53530064 Msa0028550:intron
TGGCAACGAGTAGTGGATTG+AGG 0.588292 1_1:-53524966 None:intergenic
AAGCCATATTTCATTGGACC+GGG 0.588357 1_1:-53532394 None:intergenic
GACGGAAAGAGATGTTAGGT+TGG 0.594701 1_1:+53525580 Msa0028550:CDS
AAGCTTTGCTAAATGCTACA+TGG 0.595339 1_1:+53535717 Msa0028550:CDS
ACAGATTAGCTTCTTCCCAA+GGG 0.596152 1_1:+53526749 Msa0028550:CDS
AACAACAGAAGAAGGGCAAG+AGG 0.596199 1_1:+53532557 Msa0028550:CDS
AGCACCATATGCAGCTGTAG+AGG 0.597798 1_1:-53538183 None:intergenic
TTTCATTGGAATTGTAACCA+AGG 0.599457 1_1:+53530126 Msa0028550:CDS
ATATGGTGCTGCAGCTGTAA+CGG 0.600094 1_1:+53538196 Msa0028550:three_prime_UTR
GGTGGTCAAGTTCTAAATTG+GGG 0.601878 1_1:+53526853 Msa0028550:CDS
TGAAGGGGATTGTTGCGGAG+AGG 0.603256 1_1:-53524833 None:intergenic
GACCAATGCATAAATCCTGA+AGG 0.603749 1_1:+53529705 Msa0028550:CDS
AGTGCGCCATCTGCTTATGT+GGG 0.605908 1_1:+53537635 Msa0028550:CDS
GATGCCCTTCATCAACAAGC+TGG 0.609006 1_1:+53529477 Msa0028550:CDS
CCGGGTCCCACATAAGCAGA+TGG 0.610347 1_1:-53537641 None:intergenic
GAAGGACCATCCTGACACTC+AGG 0.611190 1_1:-53530207 None:intergenic
AGGGCATCTGGTATAGGCTG+GGG 0.612492 1_1:-53529462 None:intergenic
AGTGTGATGCTTCAGTAGCA+GGG 0.614089 1_1:-53538268 None:intergenic
TAAATGCTACATGGTATCAA+GGG 0.615134 1_1:+53535726 Msa0028550:CDS
ATTGTGCAGGAGGAAACAAC+CGG 0.615860 1_1:+53538109 Msa0028550:exon
TAATGAATAAGAAGATGAAG+AGG 0.616048 1_1:-53527400 None:intergenic
TAGATTTAGAGAGAAACCCC+TGG 0.616219 1_1:-53538240 None:intergenic
CAAGAAGATAATTGTGCAGG+AGG 0.616798 1_1:+53538099 Msa0028550:exon
AGCATTTATATGCTTCTACT+GGG 0.617258 1_1:+53535558 Msa0028550:CDS
TCTTCGACCTTGGAGCATTG+CGG 0.617385 1_1:-53524991 None:intergenic
CTCCAGGTGCAATCGATCAG+AGG 0.618244 1_1:-53528702 None:intergenic
TTTGTAAACGGTTAAGCATG+TGG 0.619327 1_1:-53524871 None:intergenic
AGTAATCCTGAGTGTCAGGA+TGG 0.619635 1_1:+53530201 Msa0028550:CDS
AGAGGATGAAAGAACTCGTG+TGG 0.621867 1_1:+53526822 Msa0028550:CDS
GGTCTGCTGTGTACTTAAGT+GGG 0.623133 1_1:+53532169 Msa0028550:CDS
GGTCGTTGTACAAAATTACA+GGG 0.623669 1_1:-53529638 None:intergenic
CGGTGCGGAAGCTAGTGAGA+TGG 0.625186 1_1:+53525422 Msa0028550:CDS
GGATGATTCGGCGTGAGTGA+AGG 0.625250 1_1:-53524850 None:intergenic
AGGTCGAAGAAAATCTCAAG+AGG 0.625421 1_1:+53525004 Msa0028550:CDS
GGGCTGGAATGAGGGTGTGA+AGG 0.627190 1_1:+53536008 Msa0028550:CDS
TTGCTGTAGATCCTGAATGA+AGG 0.628923 1_1:-53526352 None:intergenic
GGTTGAAAACAACAGAAGAA+GGG 0.630216 1_1:+53532550 Msa0028550:CDS
TATCCCTGTGTGTGATATTG+CGG 0.631016 1_1:-53533599 None:intergenic
ACACACAGGGATATTAAACC+TGG 0.631661 1_1:+53533609 Msa0028550:CDS
ATGATTCGGCGTGAGTGAAG+GGG 0.632437 1_1:-53524848 None:intergenic
GATCGAAGAGGTTCCAGCGG+GGG 0.633018 1_1:-53524932 None:intergenic
AATGGGGATTAAGGAAGTTG+TGG 0.634124 1_1:+53525368 Msa0028550:CDS
AGTTGTGGTTGGGATTGTGG+CGG 0.635560 1_1:+53525383 Msa0028550:CDS
GCTATTACAGGTATGACATG+TGG 0.637987 1_1:+53535890 Msa0028550:intron
TGAATGAAGGTTATTCCTAG+AGG 0.639688 1_1:-53526339 None:intergenic
GCTTTGAAGATCCAGAGTCA+GGG 0.642490 1_1:+53534176 Msa0028550:CDS
TGAATGAACTGCATTCTGAA+AGG 0.646082 1_1:+53525607 Msa0028550:CDS
GTGAGTGAAGGGGATTGTTG+CGG 0.646562 1_1:-53524838 None:intergenic
ATTGTGCATCTTAATCCCTG+GGG 0.647262 1_1:+53536392 Msa0028550:CDS
AGTAGCTGCCAGAAACCCCA+GGG 0.648173 1_1:-53536407 None:intergenic
ATCGGAAAATCTGATCCTAA+CGG 0.648275 1_1:+53524692 Msa0028550:five_prime_UTR
GACCTTGGAGCATTGCGGAG+TGG 0.648976 1_1:-53524986 None:intergenic
AGGTATGACATGTGGAGTGT+TGG 0.649398 1_1:+53535898 Msa0028550:intron
CGACCGCAATATCACACACA+GGG 0.649899 1_1:+53533596 Msa0028550:CDS
ATGGTCAGTTGGCTATAACA+CGG 0.652150 1_1:+53526893 Msa0028550:CDS
TGATAGGTTGAAGTGAAACA+TGG 0.652421 1_1:+53529339 Msa0028550:intron
GGTCAAGTTCTAAATTGGGG+CGG 0.652501 1_1:+53526856 Msa0028550:CDS
TACTACGTCCATCAAAGTGG+TGG 0.655382 1_1:+53532523 Msa0028550:CDS
GAAGATTTGAAAGATTCCAG+AGG 0.656765 1_1:-53527489 None:intergenic
GCATTTAGCAAAGCTTCAGG+AGG 0.661051 1_1:-53535710 None:intergenic
GTGATGGTTCTGTTTCTGTG+TGG 0.661246 1_1:+53526713 Msa0028550:CDS
GGATCGGCCAAGTGTTGACG+AGG 0.662296 1_1:+53538046 Msa0028550:CDS
GGATACTACGTCCATCAAAG+TGG 0.662788 1_1:+53532520 Msa0028550:CDS
TATACGTTTCAAAATGTACA+GGG 0.664830 1_1:-53530238 None:intergenic
TATAGGCAGACAGAGCGTGA+TGG 0.668590 1_1:+53526697 Msa0028550:CDS
GACGAGAATTGTGATCGAAG+AGG 0.668622 1_1:-53524944 None:intergenic
TGTGATCGAAGAGGTTCCAG+CGG 0.668743 1_1:-53524935 None:intergenic
ACTCGTGTGGAAGCTGCTGG+TGG 0.671105 1_1:+53526835 Msa0028550:CDS
ACACTCTATGCTGAAAAGTG+AGG 0.673822 1_1:-53524723 None:intergenic
TGTGTACTTAAGTGGGCTGA+GGG 0.679721 1_1:+53532176 Msa0028550:CDS
TCACAGAACAAATACTGGCG+CGG 0.679742 1_1:+53524649 Msa0028550:five_prime_UTR
ACGACCGCAATATCACACAC+AGG 0.685103 1_1:+53533595 Msa0028550:CDS
GCCAACTGACCATTTACGCG+AGG 0.686631 1_1:-53526883 None:intergenic
ATGTTTGATTAGGTGCAATG+GGG 0.693914 1_1:+53525352 Msa0028550:intron
GGATCATCATCCAGACAGAG+AGG 0.695616 1_1:+53526804 Msa0028550:CDS
AAGAAGCTACACTGAAAACG+AGG 0.698930 1_1:+53527527 Msa0028550:CDS
GAAATGGAATGCGAAGATCG+AGG 0.704163 1_1:-53525043 None:intergenic
TTTCGATGGTCATAACGGTG+CGG 0.715714 1_1:+53525407 Msa0028550:CDS
CACATCTTCAAAGCACATGG+AGG 0.716246 1_1:-53532229 None:intergenic
TGATCGAAGAGGTTCCAGCG+GGG 0.731401 1_1:-53524933 None:intergenic
TTAACCGTTTACAAACACGG+TGG 0.787662 1_1:+53524879 Msa0028550:CDS
GCTACTGAAGCATCACACTG+CGG 0.813899 1_1:+53538272 Msa0028550:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATAATTTAAAAATTTCA+GGG + chr1_1:53527145-53527164 Msa0028550:intron 10.0%
!! TTATCAACTAATTTATTATT+TGG + chr1_1:53528656-53528675 Msa0028550:intron 10.0%
!! TTAAGTAAAGTAAAAAATTT+GGG - chr1_1:53530607-53530626 None:intergenic 10.0%
!! TCTTATTAGTAAATATTATT+AGG - chr1_1:53531759-53531778 None:intergenic 10.0%
!! TAATAATATTTACTAATAAG+AGG + chr1_1:53531758-53531777 Msa0028550:intron 10.0%
!! TAATTTAAGTATAATTAAGA+TGG + chr1_1:53533039-53533058 Msa0028550:intron 10.0%
!! AAAATAAATTGATATTTGAT+CGG - chr1_1:53533526-53533545 None:intergenic 10.0%
!!! CAATTTTTTATTCTAAAAAA+AGG - chr1_1:53534290-53534309 None:intergenic 10.0%
!!! TTTTTAGAATAAAAAATTGA+TGG + chr1_1:53534291-53534310 Msa0028550:intron 10.0%
!!! TTTTAGAATAAAAAATTGAT+GGG + chr1_1:53534292-53534311 Msa0028550:intron 10.0%
!! TAATAATGTTATAAATGAAT+TGG + chr1_1:53536592-53536611 Msa0028550:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532695-53532714 None:intergenic 100.0%
!!! AGTTTTTGTTAATAGATAAT+TGG + chr1_1:53525657-53525676 Msa0028550:intron 15.0%
!!! AATTTTACAAAAACTTCATT+TGG + chr1_1:53526261-53526280 Msa0028550:intron 15.0%
!!! AAACTTATATCTTTTAACAA+TGG - chr1_1:53526511-53526530 None:intergenic 15.0%
!! TAAAAGATATAAGTTTATCA+TGG + chr1_1:53526515-53526534 Msa0028550:intron 15.0%
!! ATTAAGATTAAATTGCAAAA+TGG + chr1_1:53527071-53527090 Msa0028550:intron 15.0%
!! GCTAATAATTTAAAAATTTC+AGG + chr1_1:53527144-53527163 Msa0028550:intron 15.0%
!! ATATGGAATAATTATAACAT+GGG - chr1_1:53527845-53527864 None:intergenic 15.0%
!!! GTAAAGTCAATTTTTAAAAA+AGG + chr1_1:53527934-53527953 Msa0028550:intron 15.0%
!!! TTTTATATATTGTTTTGCTT+AGG - chr1_1:53528015-53528034 None:intergenic 15.0%
!!! AATAAAAGGATCTTTTAAAA+AGG - chr1_1:53528282-53528301 None:intergenic 15.0%
!! ATCACTAAATTTATTTAATC+TGG + chr1_1:53528596-53528615 Msa0028550:intron 15.0%
!!! TTTTATTTATCAGAAAATCT+TGG + chr1_1:53529375-53529394 Msa0028550:CDS 15.0%
!! TAAGTAAAGTAAAAAATTTG+GGG - chr1_1:53530606-53530625 None:intergenic 15.0%
!! GTTAAGTAAAGTAAAAAATT+TGG - chr1_1:53530608-53530627 None:intergenic 15.0%
!! AAGAAAGACAAATTAATTAA+TGG - chr1_1:53531225-53531244 None:intergenic 15.0%
!!! TAGTTTGTTATTTGAATTAA+GGG - chr1_1:53531638-53531657 None:intergenic 15.0%
!! TTTATTTGTATTATTGAACA+TGG + chr1_1:53532777-53532796 Msa0028550:intron 15.0%
!! TAAATTTATGATTATTTGGA+CGG - chr1_1:53532987-53533006 None:intergenic 15.0%
!! GGATTAAATTTATGATTATT+TGG - chr1_1:53532991-53533010 None:intergenic 15.0%
!!! AAAAAAAAGTATAAGTAAGA+TGG + chr1_1:53533071-53533090 Msa0028550:intron 15.0%
!!! AAAAAAAGTATAAGTAAGAT+GGG + chr1_1:53533072-53533091 Msa0028550:intron 15.0%
!! AAGTAAGAAGAAAAAAAAAA+CGG - chr1_1:53533375-53533394 None:intergenic 15.0%
!!! TCAGATGTTAATTTATTTTA+TGG + chr1_1:53533792-53533811 Msa0028550:intron 15.0%
!!! ATTTTTTTTTCTCAAATATG+TGG + chr1_1:53533931-53533950 Msa0028550:intron 15.0%
!!! TTTTTTTTTCTCAAATATGT+GGG + chr1_1:53533932-53533951 Msa0028550:intron 15.0%
!!! TTTTGTATTTAATGTCTAAT+TGG + chr1_1:53533968-53533987 Msa0028550:intron 15.0%
!! TTTAAAGATGTATATTCAAA+TGG - chr1_1:53534697-53534716 None:intergenic 15.0%
!! AATTTAAATTATCTGCAATT+TGG + chr1_1:53534958-53534977 Msa0028550:intron 15.0%
!! AGAAAAAAAAAATCTTTATC+TGG + chr1_1:53535304-53535323 Msa0028550:intron 15.0%
!!! GTATATAAATTGATAATCAT+TGG + chr1_1:53535334-53535353 Msa0028550:intron 15.0%
!! AAAATTTACAGTATTAAAGA+AGG - chr1_1:53536080-53536099 None:intergenic 15.0%
!!! TCTTTAATACTGTAAATTTT+TGG + chr1_1:53536080-53536099 Msa0028550:intron 15.0%
!! ATAAACATTAAATAATCCTA+GGG - chr1_1:53536854-53536873 None:intergenic 15.0%
!!! AAAGTATTTTTCTTTTCTTT+TGG - chr1_1:53537931-53537950 None:intergenic 15.0%
!!! ATTATGAATGATTGTTTTGT+TGG + chr1_1:53525991-53526010 Msa0028550:intron 20.0%
!! ATCTTTCAATTAAACTATGA+AGG + chr1_1:53526313-53526332 Msa0028550:intron 20.0%
!! TATTAATACTGCCTTAAAAA+AGG + chr1_1:53527434-53527453 Msa0028550:CDS 20.0%
!! ATTAATACTGCCTTAAAAAA+GGG + chr1_1:53527435-53527454 Msa0028550:CDS 20.0%
!! CATAATGAATTGAATGTATA+TGG + chr1_1:53527704-53527723 Msa0028550:intron 20.0%
!!! TTCATTTTTTCTCATTTAAC+AGG + chr1_1:53527746-53527765 Msa0028550:intron 20.0%
!! TATGGAATAATTATAACATG+GGG - chr1_1:53527844-53527863 None:intergenic 20.0%
!! CATATGGAATAATTATAACA+TGG - chr1_1:53527846-53527865 None:intergenic 20.0%
!!! AAATTTTAAAGTTTGTGTGA+AGG - chr1_1:53527878-53527897 None:intergenic 20.0%
!! AAAGGAAAATTATTAAGAAG+AGG + chr1_1:53527952-53527971 Msa0028550:intron 20.0%
!! AAATATTACGAAGATAAAGA+AGG + chr1_1:53527977-53527996 Msa0028550:intron 20.0%
!! TAGATGCAAAACTAAATAAA+AGG - chr1_1:53528296-53528315 None:intergenic 20.0%
!! TATGATGACAATATATTGTT+TGG + chr1_1:53528911-53528930 Msa0028550:intron 20.0%
!!! TTGTGATGAAATGTAATTTT+TGG + chr1_1:53529047-53529066 Msa0028550:intron 20.0%
!! AACCAAAAATGCTAATAAAT+CGG - chr1_1:53529073-53529092 None:intergenic 20.0%
!!! AAAGAAAAATAACTGCTTTT+TGG - chr1_1:53529120-53529139 None:intergenic 20.0%
!!! AGGTGTAAATTTTCAATTTT+TGG + chr1_1:53529166-53529185 Msa0028550:intron 20.0%
!!! GGTGTAAATTTTCAATTTTT+GGG + chr1_1:53529167-53529186 Msa0028550:intron 20.0%
!! ATTAAAAGAACATATAGACA+AGG - chr1_1:53529235-53529254 None:intergenic 20.0%
!!! TAATCTGAATAAATTCCTTT+TGG + chr1_1:53529306-53529325 Msa0028550:intron 20.0%
!! ATCAACTAAAATGTAAGATA+AGG - chr1_1:53529575-53529594 None:intergenic 20.0%
!!! AGAACTATTTTTAATGGTTT+CGG + chr1_1:53530284-53530303 Msa0028550:intron 20.0%
!! TTATGTTGTGGTAATAAAAT+AGG - chr1_1:53530377-53530396 None:intergenic 20.0%
!! ATTGCATATTAATTATGTTG+TGG - chr1_1:53530389-53530408 None:intergenic 20.0%
!!! AACTTCTAGAAATGTTTATA+GGG - chr1_1:53530493-53530512 None:intergenic 20.0%
!! AAGTAAAGTAAAAAATTTGG+GGG - chr1_1:53530605-53530624 None:intergenic 20.0%
!! CAACAAAAATAAAGAAACAT+GGG - chr1_1:53530936-53530955 None:intergenic 20.0%
!!! TGCCTTATTCTATTAATTAA+TGG + chr1_1:53531189-53531208 Msa0028550:intron 20.0%
!! CTCCATTAATTAATAGAATA+AGG - chr1_1:53531194-53531213 None:intergenic 20.0%
!!! TTTTTCTATTTTCTTGCTTA+TGG - chr1_1:53531366-53531385 None:intergenic 20.0%
!! AAGAAAATAGAAAAAAGTGA+AGG + chr1_1:53531371-53531390 Msa0028550:intron 20.0%
!!! CTAGTTTGTTATTTGAATTA+AGG - chr1_1:53531639-53531658 None:intergenic 20.0%
!! TTTATTATACATATGTAAGC+AGG + chr1_1:53532105-53532124 Msa0028550:intron 20.0%
!! AATAAAAATAACAACAGTGA+TGG - chr1_1:53532763-53532782 None:intergenic 20.0%
!! AAAGTTAATTTCTTTCTCAA+AGG + chr1_1:53532845-53532864 Msa0028550:intron 20.0%
!! AAGTTAATTTCTTTCTCAAA+GGG + chr1_1:53532846-53532865 Msa0028550:intron 20.0%
!! ATATAAAAAACAGACAGAAA+AGG - chr1_1:53533313-53533332 None:intergenic 20.0%
!!! TTGGTAAAATTAGTTTTGTT+CGG - chr1_1:53533474-53533493 None:intergenic 20.0%
!!! AAAAAGCATTCAAGAAAAAT+TGG - chr1_1:53533493-53533512 None:intergenic 20.0%
!!! AATTTTTCTTGAATGCTTTT+TGG + chr1_1:53533492-53533511 Msa0028550:intron 20.0%
!! TAAACACTATTGTTTCATAA+AGG + chr1_1:53533688-53533707 Msa0028550:intron 20.0%
!!! TGTTATTTTTGAAGAGAATA+TGG + chr1_1:53534147-53534166 Msa0028550:intron 20.0%
!!! GAAAAATTATTCACTTTTGT+TGG - chr1_1:53534220-53534239 None:intergenic 20.0%
!! AAAAAGGTTAGAATAAAAGA+AGG - chr1_1:53534274-53534293 None:intergenic 20.0%
!! TAATATGATTTGATCTATTG+TGG + chr1_1:53534372-53534391 Msa0028550:intron 20.0%
!! GATTATCAAACATTAAAAAG+AGG - chr1_1:53534537-53534556 None:intergenic 20.0%
!!! TTTTTTTTCTTAATGTAAGC+AGG - chr1_1:53535294-53535313 None:intergenic 20.0%
!!! TTATTGCTTACCTTTAAAAT+TGG + chr1_1:53535392-53535411 Msa0028550:intron 20.0%
!! TAGAGAAAAAATTATTGTCA+GGG - chr1_1:53536107-53536126 None:intergenic 20.0%
!! ATAGAGAAAAAATTATTGTC+AGG - chr1_1:53536108-53536127 None:intergenic 20.0%
!!! CGCTATTTATTTTATTAATG+TGG + chr1_1:53536344-53536363 Msa0028550:intron 20.0%
!!! AAAATAATTAGCTTTTGACA+AGG - chr1_1:53536497-53536516 None:intergenic 20.0%
!! ATGTTATAAATGAATTGGTT+TGG + chr1_1:53536597-53536616 Msa0028550:intron 20.0%
!! AGGTAAATATGATTTAGAAA+AGG + chr1_1:53536755-53536774 Msa0028550:intron 20.0%
!! GGTAAATATGATTTAGAAAA+GGG + chr1_1:53536756-53536775 Msa0028550:intron 20.0%
!! GATAAACATTAAATAATCCT+AGG - chr1_1:53536855-53536874 None:intergenic 20.0%
!! ATCTGAATAAATTGAATTCT+CGG - chr1_1:53537078-53537097 None:intergenic 20.0%
!! ATATATTCAAATAAGGAAGT+TGG - chr1_1:53537369-53537388 None:intergenic 20.0%
!! TTAGGCAATATATTCAAATA+AGG - chr1_1:53537376-53537395 None:intergenic 20.0%
!!! ATTCTTTTCTAGACAAATTA+AGG + chr1_1:53537460-53537479 Msa0028550:CDS 20.0%
!! AATTACAATCAAAAGTTATC+AGG - chr1_1:53537674-53537693 None:intergenic 20.0%
!!! TTTTTGAAATATGGAACTTT+AGG - chr1_1:53537704-53537723 None:intergenic 20.0%
!!! GAACAAACTTTTTTGAAATA+TGG - chr1_1:53537713-53537732 None:intergenic 20.0%
!! ATATGTATTGTAAGAAAGAA+CGG + chr1_1:53538592-53538611 Msa0028550:three_prime_UTR 20.0%
!!! ATTTTCTTTTGACTTCAAAA+GGG - chr1_1:53538669-53538688 None:intergenic 20.0%
!! AAGTCAAAAGAAAATGTTTA+CGG + chr1_1:53538674-53538693 Msa0028550:three_prime_UTR 20.0%
! ACGTCAAATAAATAGTTTAC+CGG - chr1_1:53525069-53525088 None:intergenic 25.0%
! CAGTTATAGTTAAGTTTCAT+CGG + chr1_1:53525108-53525127 Msa0028550:intron 25.0%
! GTTACAATAATTAGTTACAG+TGG + chr1_1:53525282-53525301 Msa0028550:intron 25.0%
! TATGTGTTTGATGTTTGATT+AGG + chr1_1:53525342-53525361 Msa0028550:intron 25.0%
! GTTAATAGATAATTGGTGAA+AGG + chr1_1:53525664-53525683 Msa0028550:intron 25.0%
! CAGTGTTTATTATGAATGAT+TGG + chr1_1:53525866-53525885 Msa0028550:intron 25.0%
!!! TTTTGATGATTCTTTTCACT+TGG + chr1_1:53526159-53526178 Msa0028550:CDS 25.0%
!! TATTGATGAAAAGTTTTCTG+AGG + chr1_1:53526219-53526238 Msa0028550:CDS 25.0%
!!! AAAATTTTGGTTGCCAATAT+TGG + chr1_1:53526398-53526417 Msa0028550:CDS 25.0%
!! ATCTTTTAACAATGGAAGTT+TGG - chr1_1:53526503-53526522 None:intergenic 25.0%
! AAGTTTATCATGGCAATATT+AGG + chr1_1:53526525-53526544 Msa0028550:intron 25.0%
! TATCAGTATTATATAATGCG+TGG + chr1_1:53526577-53526596 Msa0028550:intron 25.0%
!! CATTTCAATAAAAAGTATGC+TGG - chr1_1:53526617-53526636 None:intergenic 25.0%
!!! CCTATATAGCTTTAATAAAG+AGG - chr1_1:53526683-53526702 None:intergenic 25.0%
! CCTCTTTATTAAAGCTATAT+AGG + chr1_1:53526680-53526699 Msa0028550:CDS 25.0%
!!! TACACTTGATAAGTTGATAT+TGG - chr1_1:53526981-53527000 None:intergenic 25.0%
! CTTAATTTAAGAATGAGACT+TGG - chr1_1:53527057-53527076 None:intergenic 25.0%
! AGATTAAATTGCAAAATGGT+AGG + chr1_1:53527075-53527094 Msa0028550:intron 25.0%
! GATTAAATTGCAAAATGGTA+GGG + chr1_1:53527076-53527095 Msa0028550:intron 25.0%
! TAATGAACTTTCAACAGTTA+TGG + chr1_1:53527216-53527235 Msa0028550:intron 25.0%
! TAATGAATAAGAAGATGAAG+AGG - chr1_1:53527403-53527422 None:intergenic 25.0%
! TGTATATGGTATAATCAACA+AGG + chr1_1:53527718-53527737 Msa0028550:intron 25.0%
! ATGGAATAATTATAACATGG+GGG - chr1_1:53527843-53527862 None:intergenic 25.0%
!! GTTACTGCTAGAATATATTT+TGG - chr1_1:53528052-53528071 None:intergenic 25.0%
! CTAAGAAAGAGATAAATCTT+TGG + chr1_1:53528313-53528332 Msa0028550:intron 25.0%
! GAGATGCAAAAAGAAAAAAA+AGG + chr1_1:53528356-53528375 Msa0028550:intron 25.0%
! AATTATCCAAGTTCTATACT+CGG + chr1_1:53528558-53528577 Msa0028550:intron 25.0%
! ATCAGCAATAATAAATCTGA+TGG - chr1_1:53528780-53528799 None:intergenic 25.0%
!! TGAATGTTTCTATGAAATTC+AGG + chr1_1:53528829-53528848 Msa0028550:intron 25.0%
!! TGTATTCTTTATTTGAGACT+AGG + chr1_1:53528966-53528985 Msa0028550:intron 25.0%
! TATAGACAAGGATGAAAATT+TGG - chr1_1:53529223-53529242 None:intergenic 25.0%
!!! TCAGATTAATTTTGATCAGA+GGG - chr1_1:53529294-53529313 None:intergenic 25.0%
!!! TTCAGATTAATTTTGATCAG+AGG - chr1_1:53529295-53529314 None:intergenic 25.0%
! TATCATAAAAGGAAACCAAA+AGG - chr1_1:53529324-53529343 None:intergenic 25.0%
!!! TTTTGGTTTCCTTTTATGAT+AGG + chr1_1:53529323-53529342 Msa0028550:intron 25.0%
!!! GTTGATGATCAAATATACTT+TGG + chr1_1:53529589-53529608 Msa0028550:intron 25.0%
! ATGATCAAATATACTTTGGT+CGG + chr1_1:53529593-53529612 Msa0028550:intron 25.0%
! AGATAAATTTACCTTGAATC+AGG - chr1_1:53529813-53529832 None:intergenic 25.0%
!! TTTTACTAGCAACCATATAT+CGG - chr1_1:53529870-53529889 None:intergenic 25.0%
!! TATGTATTAAAGAGGAGTTT+TGG + chr1_1:53530072-53530091 Msa0028550:CDS 25.0%
!! TTTTTGCAGTAATATTACCT+TGG - chr1_1:53530146-53530165 None:intergenic 25.0%
! TATACGTTTCAAAATGTACA+GGG - chr1_1:53530241-53530260 None:intergenic 25.0%
! TTATACGTTTCAAAATGTAC+AGG - chr1_1:53530242-53530261 None:intergenic 25.0%
!!! GTACATTTTGAAACGTATAA+TGG + chr1_1:53530242-53530261 Msa0028550:CDS 25.0%
!!! TGAAGCAGAACTATTTTTAA+TGG + chr1_1:53530278-53530297 Msa0028550:intron 25.0%
!! CAACTTCTAGAAATGTTTAT+AGG - chr1_1:53530494-53530513 None:intergenic 25.0%
! AGAAAAAAAATTGAACAAGG+TGG - chr1_1:53530735-53530754 None:intergenic 25.0%
! GGAAGAAAAAAAATTGAACA+AGG - chr1_1:53530738-53530757 None:intergenic 25.0%
! AAAACCAAGACAAAAATGAA+AGG - chr1_1:53530879-53530898 None:intergenic 25.0%
! GCAACAAAAATAAAGAAACA+TGG - chr1_1:53530937-53530956 None:intergenic 25.0%
! GCAAAGAAGGAAAATAATAA+AGG - chr1_1:53531130-53531149 None:intergenic 25.0%
! TGTATATAATCTTTGCTCTT+TGG - chr1_1:53531551-53531570 None:intergenic 25.0%
!!! TTTGTTATTTGAATTAAGGG+AGG - chr1_1:53531635-53531654 None:intergenic 25.0%
!!! AGTTATGTTTTATTACGTGA+TGG - chr1_1:53531679-53531698 None:intergenic 25.0%
! TTAGGCAGTTATTATGTTAT+CGG - chr1_1:53531741-53531760 None:intergenic 25.0%
! TTTACTAATAAGAGGTTACA+CGG + chr1_1:53531766-53531785 Msa0028550:intron 25.0%
!!! TTTTTTGCTTAGACTTTCTA+AGG + chr1_1:53532051-53532070 Msa0028550:intron 25.0%
!! TTTTTGCTTAGACTTTCTAA+GGG + chr1_1:53532052-53532071 Msa0028550:intron 25.0%
! TTATATATTAGCGAACCATA+TGG - chr1_1:53532650-53532669 None:intergenic 25.0%
!! AATTTTGTCGAATCCTTATT+GGG - chr1_1:53532724-53532743 None:intergenic 25.0%
!! TAATTTTGTCGAATCCTTAT+TGG - chr1_1:53532725-53532744 None:intergenic 25.0%
!! TTAACTTTTCCACATTCATT+GGG - chr1_1:53532833-53532852 None:intergenic 25.0%
!! ATTAACTTTTCCACATTCAT+TGG - chr1_1:53532834-53532853 None:intergenic 25.0%
! CATGGATACAAAAAAGTAAA+AGG + chr1_1:53532875-53532894 Msa0028550:intron 25.0%
! TTACCTCAATTAAGAAGAAT+GGG - chr1_1:53533022-53533041 None:intergenic 25.0%
! ATTACCTCAATTAAGAAGAA+TGG - chr1_1:53533023-53533042 None:intergenic 25.0%
!!! AATTAGTTTTGTTCGGTTTT+AGG - chr1_1:53533467-53533486 None:intergenic 25.0%
!!! TCTTTTATTTGCTCAGTTAT+TGG + chr1_1:53533557-53533576 Msa0028550:intron 25.0%
! CATAAAGGATATCAATCATT+TGG + chr1_1:53533703-53533722 Msa0028550:intron 25.0%
! AATTAAGCTGAAATCAATTC+TGG + chr1_1:53533896-53533915 Msa0028550:intron 25.0%
! TGGTTAAAATACTATTACGA+TGG + chr1_1:53533988-53534007 Msa0028550:intron 25.0%
!! AATTTTTCCACCAAAATGTA+TGG + chr1_1:53534232-53534251 Msa0028550:intron 25.0%
!! AAATACTTCACCATACATTT+TGG - chr1_1:53534245-53534264 None:intergenic 25.0%
! TCCAACTTAACTCAAAATTT+GGG - chr1_1:53534589-53534608 None:intergenic 25.0%
! TAAAAGATCAATCCTTTGAA+GGG - chr1_1:53534769-53534788 None:intergenic 25.0%
!!! CTTACCTTTAAAATTGGATT+TGG + chr1_1:53535398-53535417 Msa0028550:intron 25.0%
!! ATAGCCAAATCCAATTTTAA+AGG - chr1_1:53535405-53535424 None:intergenic 25.0%
!! AAAGATTTTGCATGATTGTT+TGG + chr1_1:53535816-53535835 Msa0028550:intron 25.0%
! GCATTTATCTGGAAAATATT+TGG - chr1_1:53535955-53535974 None:intergenic 25.0%
! AGAGAAAAAATTATTGTCAG+GGG - chr1_1:53536106-53536125 None:intergenic 25.0%
!!! CACAACTTTTACTTTTATGA+TGG + chr1_1:53536555-53536574 Msa0028550:intron 25.0%
!!! ATCTTTGGGATATTAGAATT+GGG - chr1_1:53536726-53536745 None:intergenic 25.0%
!!! TATCTTTGGGATATTAGAAT+TGG - chr1_1:53536727-53536746 None:intergenic 25.0%
! TACCTACTGTTATTATCTTT+GGG - chr1_1:53536740-53536759 None:intergenic 25.0%
! TTACCTACTGTTATTATCTT+TGG - chr1_1:53536741-53536760 None:intergenic 25.0%
! TTTAGAAAAGGGTTTATCAT+CGG + chr1_1:53536767-53536786 Msa0028550:intron 25.0%
! TTTATAATTCCCCTAAAAGA+TGG + chr1_1:53536816-53536835 Msa0028550:intron 25.0%
! ATACAAAATGATTGAGAAAC+AGG - chr1_1:53537000-53537019 None:intergenic 25.0%
!! TGTTTCTCAATCATTTTGTA+TGG + chr1_1:53536999-53537018 Msa0028550:intron 25.0%
! ATTGAATTCTCGGTAAATAT+TGG - chr1_1:53537068-53537087 None:intergenic 25.0%
! ACAGAAAAGAAAACTTCATT+AGG - chr1_1:53537394-53537413 None:intergenic 25.0%
!! GTTTTCTTTTCTGTCATTAT+AGG + chr1_1:53537400-53537419 Msa0028550:intron 25.0%
! CACTCTAATATCTTAGTAAT+AGG + chr1_1:53537809-53537828 Msa0028550:intron 25.0%
! TTAAGTTTATTTCGCTACAA+AGG + chr1_1:53537835-53537854 Msa0028550:intron 25.0%
! AATAGAACGAAGATAAAATG+AGG - chr1_1:53537906-53537925 None:intergenic 25.0%
!! TTACTCTCTTTATATTTTGC+AGG + chr1_1:53538022-53538041 Msa0028550:intron 25.0%
!!! GGAGTTGTTTTTAAATCTAA+TGG - chr1_1:53538222-53538241 None:intergenic 25.0%
! TTAGATTTAAAAACAACTCC+AGG + chr1_1:53538222-53538241 Msa0028550:three_prime_UTR 25.0%
! TAGATTTAAAAACAACTCCA+GGG + chr1_1:53538223-53538242 Msa0028550:three_prime_UTR 25.0%
! TATGTATTGTAAGAAAGAAC+GGG + chr1_1:53538593-53538612 Msa0028550:three_prime_UTR 25.0%
! AACAGAACATTTAATCCAAA+TGG - chr1_1:53538646-53538665 None:intergenic 25.0%
!!! CATTTTCTTTTGACTTCAAA+AGG - chr1_1:53538670-53538689 None:intergenic 25.0%
AGTGCTTTCTAATCATGTTT+GGG - chr1_1:53524788-53524807 None:intergenic 30.0%
AAGTGCTTTCTAATCATGTT+TGG - chr1_1:53524789-53524808 None:intergenic 30.0%
ATAAATAGTTTACCGGGAAA+TGG - chr1_1:53525062-53525081 None:intergenic 30.0%
CGTCAAATAAATAGTTTACC+GGG - chr1_1:53525068-53525087 None:intergenic 30.0%
ACTAGTTAGTTGAGTTTCAT+TGG + chr1_1:53525205-53525224 Msa0028550:intron 30.0%
ATGTAAACGTATTGCATAGA+CGG + chr1_1:53525562-53525581 Msa0028550:CDS 30.0%
TATCTAGTATCGTTGATCAA+AGG + chr1_1:53525697-53525716 Msa0028550:intron 30.0%
AGACATACAAATGTGAGAAA+TGG - chr1_1:53526088-53526107 None:intergenic 30.0%
TCAACTAAAAAAACCTTTCC+AGG + chr1_1:53526113-53526132 Msa0028550:intron 30.0%
! GGTTGCAGATGATAAAATTT+TGG + chr1_1:53526385-53526404 Msa0028550:CDS 30.0%
! TGAAAATTTTCAGTCTCCTA+AGG + chr1_1:53526445-53526464 Msa0028550:CDS 30.0%
TGAAATGAAACACGACTATA+AGG + chr1_1:53526630-53526649 Msa0028550:intron 30.0%
! TGTTCTTTAAAAGGTAGGTT+CGG + chr1_1:53526929-53526948 Msa0028550:intron 30.0%
!! TTGATAAGTTGATATTGGCT+TGG - chr1_1:53526976-53526995 None:intergenic 30.0%
TTTAAAAATTTCAGGGTGAC+TGG + chr1_1:53527152-53527171 Msa0028550:intron 30.0%
ATGCATTAGCAATCATCATA+GGG - chr1_1:53527673-53527692 None:intergenic 30.0%
TATGCATTAGCAATCATCAT+AGG - chr1_1:53527674-53527693 None:intergenic 30.0%
ATGGTATAATCAACAAGGTT+TGG + chr1_1:53527723-53527742 Msa0028550:intron 30.0%
!! TATTGTTTTGCTTAGGAGTT+AGG - chr1_1:53528008-53528027 None:intergenic 30.0%
ATATTCTAGCAGTAACAGTT+AGG + chr1_1:53528056-53528075 Msa0028550:intron 30.0%
TATTCTAGCAGTAACAGTTA+GGG + chr1_1:53528057-53528076 Msa0028550:intron 30.0%
! AAAAAAGCACACAAGAAGTA+GGG + chr1_1:53528121-53528140 Msa0028550:intron 30.0%
!!! GGATCTTTTAAAAAGGTGTT+GGG - chr1_1:53528275-53528294 None:intergenic 30.0%
!! AGGATCTTTTAAAAAGGTGT+TGG - chr1_1:53528276-53528295 None:intergenic 30.0%
GCAAAAAGAAAAAAAAGGTC+AGG + chr1_1:53528361-53528380 Msa0028550:intron 30.0%
! TCTTTTCTAGATGCTACATT+TGG + chr1_1:53528478-53528497 Msa0028550:intron 30.0%
TACCAAGTTTAAGCGAATAA+TGG + chr1_1:53528742-53528761 Msa0028550:CDS 30.0%
TACCATTATTCGCTTAAACT+TGG - chr1_1:53528747-53528766 None:intergenic 30.0%
AGTTTAAGCGAATAATGGTA+TGG + chr1_1:53528747-53528766 Msa0028550:intron 30.0%
GATGACAATATATTGTTTGG+TGG + chr1_1:53528914-53528933 Msa0028550:intron 30.0%
! ACAATATATTGTTTGGTGGT+GGG + chr1_1:53528918-53528937 Msa0028550:intron 30.0%
ACATTTCATCACAAAGAAAG+TGG - chr1_1:53529041-53529060 None:intergenic 30.0%
!! CTTTTTGGCAATAGATTAAC+TGG - chr1_1:53529105-53529124 None:intergenic 30.0%
!!! AGGATGAAAATTTGGTTTTG+CGG - chr1_1:53529215-53529234 None:intergenic 30.0%
TCACTTCAACCTATCATAAA+AGG - chr1_1:53529335-53529354 None:intergenic 30.0%
! AAGTGAAACATGGTGATTTT+GGG + chr1_1:53529349-53529368 Msa0028550:CDS 30.0%
! ATCAGAAAATCTTGGTGATT+TGG + chr1_1:53529383-53529402 Msa0028550:CDS 30.0%
TTCAAGAAGACCAATAAAAC+TGG - chr1_1:53529736-53529755 None:intergenic 30.0%
TCAATTCCTTTACATGATAC+TGG + chr1_1:53529756-53529775 Msa0028550:CDS 30.0%
ATTATTCAATGCCTGATTCA+AGG + chr1_1:53529799-53529818 Msa0028550:CDS 30.0%
TACATCTATAAGCCGATATA+TGG + chr1_1:53529855-53529874 Msa0028550:intron 30.0%
! TTAAAGCATCAAATTTGCAG+GGG - chr1_1:53530001-53530020 None:intergenic 30.0%
! CTTAAAGCATCAAATTTGCA+GGG - chr1_1:53530002-53530021 None:intergenic 30.0%
! ACTTAAAGCATCAAATTTGC+AGG - chr1_1:53530003-53530022 None:intergenic 30.0%
TTTCATTGGAATTGTAACCA+AGG + chr1_1:53530126-53530145 Msa0028550:CDS 30.0%
TATTACTGCAAAAATGAGCA+AGG + chr1_1:53530152-53530171 Msa0028550:CDS 30.0%
ATTACTGCAAAAATGAGCAA+GGG + chr1_1:53530153-53530172 Msa0028550:CDS 30.0%
TTTAATGGTTTCGGTTTATC+AGG + chr1_1:53530293-53530312 Msa0028550:intron 30.0%
! GTAATTTGTACAAATCAGCA+AGG - chr1_1:53530422-53530441 None:intergenic 30.0%
!!! ACTGCTTTTCTTTAAAGTGA+GGG + chr1_1:53530843-53530862 Msa0028550:intron 30.0%
!! TAGTCCTTTCATTTTTGTCT+TGG + chr1_1:53530872-53530891 Msa0028550:intron 30.0%
!! CTTGGTTTTTCAATAAGTTG+TGG + chr1_1:53530890-53530909 Msa0028550:intron 30.0%
AAAAATAAAGAAACATGGGC+GGG - chr1_1:53530932-53530951 None:intergenic 30.0%
CAAAAATAAAGAAACATGGG+CGG - chr1_1:53530933-53530952 None:intergenic 30.0%
AACAAAGACAAAAGAAGGAA+TGG - chr1_1:53530962-53530981 None:intergenic 30.0%
! ATTCCTTCTTTTGTCTTTGT+TGG + chr1_1:53530961-53530980 Msa0028550:intron 30.0%
ATTTCAGAGAGAAATGAGAA+AGG - chr1_1:53531288-53531307 None:intergenic 30.0%
TAACTGAACTGAATACTGTT+AGG + chr1_1:53531452-53531471 Msa0028550:intron 30.0%
AAGATTATATACACACTGAC+AGG + chr1_1:53531558-53531577 Msa0028550:intron 30.0%
ATCGGTAGTAGCTATTATTT+AGG - chr1_1:53531723-53531742 None:intergenic 30.0%
! TTTTGCTTAGACTTTCTAAG+GGG + chr1_1:53532053-53532072 Msa0028550:intron 30.0%
GTTCAAACCTTCTTCATATA+TGG - chr1_1:53532343-53532362 None:intergenic 30.0%
ATTCCACATATCTTGCAATA+TGG - chr1_1:53532365-53532384 None:intergenic 30.0%
GAATACAAGCCATATTTCAT+TGG - chr1_1:53532403-53532422 None:intergenic 30.0%
TCTTCAATGTAGGTTTGTAA+GGG + chr1_1:53532611-53532630 Msa0028550:intron 30.0%
! ATTTTGTCGAATCCTTATTG+GGG - chr1_1:53532723-53532742 None:intergenic 30.0%
TTAATTTCTTTCTCAAAGGG+AGG + chr1_1:53532849-53532868 Msa0028550:intron 30.0%
ATTTATGATTATTTGGACGG+AGG - chr1_1:53532984-53533003 None:intergenic 30.0%
TACCTCAATTAAGAAGAATG+GGG - chr1_1:53533021-53533040 None:intergenic 30.0%
TTGCAATTGTATTCTTGTCA+AGG - chr1_1:53533203-53533222 None:intergenic 30.0%
!!! TTTTGCAGTCTTGTTTGAAT+CGG - chr1_1:53533428-53533447 None:intergenic 30.0%
!!! TTCGGTTTTAGGTTTGTTTT+TGG - chr1_1:53533456-53533475 None:intergenic 30.0%
ATATTAAACCTGGTAAGACA+TGG + chr1_1:53533619-53533638 Msa0028550:intron 30.0%
TATTAAACCTGGTAAGACAT+GGG + chr1_1:53533620-53533639 Msa0028550:intron 30.0%
! TAATCAACCTGTCTTCATTT+TGG + chr1_1:53533852-53533871 Msa0028550:intron 30.0%
! AATCAACCTGTCTTCATTTT+GGG + chr1_1:53533853-53533872 Msa0028550:intron 30.0%
! CAAGTCAGTTACATTTTACA+AGG - chr1_1:53534122-53534141 None:intergenic 30.0%
!! TGTAAAATGTAACTGACTTG+AGG + chr1_1:53534122-53534141 Msa0028550:intron 30.0%
ATTACTTCTGCTCATTATGT+AGG - chr1_1:53534445-53534464 None:intergenic 30.0%
CCAAAACTATGAAACACATT+GGG - chr1_1:53534483-53534502 None:intergenic 30.0%
ACCAAAACTATGAAACACAT+TGG - chr1_1:53534484-53534503 None:intergenic 30.0%
CAACTTAACTCAAAATTTGG+GGG - chr1_1:53534587-53534606 None:intergenic 30.0%
CCAACTTAACTCAAAATTTG+GGG - chr1_1:53534588-53534607 None:intergenic 30.0%
CTCCAACTTAACTCAAAATT+TGG - chr1_1:53534590-53534609 None:intergenic 30.0%
TGAGGATCATCAAGATAAAT+TGG - chr1_1:53534724-53534743 None:intergenic 30.0%
CTAAAAGATCAATCCTTTGA+AGG - chr1_1:53534770-53534789 None:intergenic 30.0%
!! GACTTGACATTTTAACATCA+TGG - chr1_1:53534841-53534860 None:intergenic 30.0%
GAAGAATAGTAAGAAAGAAG+TGG - chr1_1:53534934-53534953 None:intergenic 30.0%
TACTGTTAGTTATGTATCAG+TGG + chr1_1:53535030-53535049 Msa0028550:intron 30.0%
ATCCTTTCTTACAGTACATT+TGG + chr1_1:53535155-53535174 Msa0028550:intron 30.0%
TCCTGATACAATCTTTAATC+CGG + chr1_1:53535234-53535253 Msa0028550:intron 30.0%
AAGCATTTATATGCTTCTAC+TGG + chr1_1:53535557-53535576 Msa0028550:CDS 30.0%
AGCATTTATATGCTTCTACT+GGG + chr1_1:53535558-53535577 Msa0028550:CDS 30.0%
TAAATGCTACATGGTATCAA+GGG + chr1_1:53535726-53535745 Msa0028550:CDS 30.0%
!!! TGGTGGATTTAGATTTTAGA+CGG + chr1_1:53535836-53535855 Msa0028550:intron 30.0%
TATGATTACAGCCTTCTAAA+AGG - chr1_1:53536056-53536075 None:intergenic 30.0%
ATTAATGTTAGCTGTCTTTC+TGG - chr1_1:53536134-53536153 None:intergenic 30.0%
ACAGCTAACATTAATTCATG+TGG + chr1_1:53536139-53536158 Msa0028550:intron 30.0%
CTCTTCTTAATGTATAACGT+TGG + chr1_1:53536530-53536549 Msa0028550:intron 30.0%
AAAGATAATCTCCAAAGTTC+AGG + chr1_1:53536679-53536698 Msa0028550:intron 30.0%
ATCCCAAAGATAATAACAGT+AGG + chr1_1:53536735-53536754 Msa0028550:intron 30.0%
TATAAAATTCCAGATCTGAG+AGG - chr1_1:53536802-53536821 None:intergenic 30.0%
! AATTTGAGCTTTGACATGTT+GGG - chr1_1:53536896-53536915 None:intergenic 30.0%
! AAATTTGAGCTTTGACATGT+TGG - chr1_1:53536897-53536916 None:intergenic 30.0%
! TCTCAATCATTTTGTATGGT+TGG + chr1_1:53537003-53537022 Msa0028550:intron 30.0%
ATTCAAATAAGGAAGTTGGA+AGG - chr1_1:53537365-53537384 None:intergenic 30.0%
! TCTTTTCTGTCATTATAGGT+TGG + chr1_1:53537404-53537423 Msa0028550:intron 30.0%
CTAGAGATCCTCTTAAAATA+GGG + chr1_1:53537483-53537502 Msa0028550:CDS 30.0%
AAAGTTATCAGGAAACTTAC+CGG - chr1_1:53537663-53537682 None:intergenic 30.0%
!! CAAATTTTAATGCTAAGACC+AGG - chr1_1:53537763-53537782 None:intergenic 30.0%
! ATTCGTTCTTGTCAATCTTT+TGG + chr1_1:53537953-53537972 Msa0028550:intron 30.0%
! TTTATATTTTGCAGGAGGAT+CGG + chr1_1:53538030-53538049 Msa0028550:intron 30.0%
CACTGAAAAATTCATACAAG+AGG + chr1_1:53538138-53538157 Msa0028550:three_prime_UTR 30.0%
AGATTTAAAAACAACTCCAG+GGG + chr1_1:53538224-53538243 Msa0028550:three_prime_UTR 30.0%
! CTATCATCAGTCCATTATTT+TGG - chr1_1:53538446-53538465 None:intergenic 30.0%
!! CAAAATAATGGACTGATGAT+AGG + chr1_1:53538444-53538463 Msa0028550:three_prime_UTR 30.0%
!!! AGTAGTCTTGTTCTTCTTTT+TGG - chr1_1:53538490-53538509 None:intergenic 30.0%
AGAAGAACAAGACTACTTAT+AGG + chr1_1:53538493-53538512 Msa0028550:three_prime_UTR 30.0%
TCAAAATATAGACACCTAAC+AGG + chr1_1:53538518-53538537 Msa0028550:three_prime_UTR 30.0%
ATCGGAAAATCTGATCCTAA+CGG + chr1_1:53524692-53524711 Msa0028550:five_prime_UTR 35.0%
! TTCTAATCATGTTTGGGATG+AGG - chr1_1:53524782-53524801 None:intergenic 35.0%
TTTGTAAACGGTTAAGCATG+TGG - chr1_1:53524874-53524893 None:intergenic 35.0%
TGCTTAACCGTTTACAAACA+CGG + chr1_1:53524876-53524895 Msa0028550:CDS 35.0%
TGATGTTTGATTAGGTGCAA+TGG + chr1_1:53525350-53525369 Msa0028550:intron 35.0%
GATGTTTGATTAGGTGCAAT+GGG + chr1_1:53525351-53525370 Msa0028550:intron 35.0%
ATGTTTGATTAGGTGCAATG+GGG + chr1_1:53525352-53525371 Msa0028550:intron 35.0%
GATGGCGTCAAAATTATTGA+TGG + chr1_1:53525440-53525459 Msa0028550:CDS 35.0%
TGAATGAACTGCATTCTGAA+AGG + chr1_1:53525607-53525626 Msa0028550:CDS 35.0%
GTAATCACATGTGTAAGTGT+CGG + chr1_1:53525806-53525825 Msa0028550:intron 35.0%
TCAGTTAGAAATGCGTAATC+AGG + chr1_1:53525947-53525966 Msa0028550:intron 35.0%
AGAAAATGTATTCTGCAACC+TGG - chr1_1:53526134-53526153 None:intergenic 35.0%
TGAATGAAGGTTATTCCTAG+AGG - chr1_1:53526342-53526361 None:intergenic 35.0%
TCTAGGAATAACCTTCATTC+AGG + chr1_1:53526341-53526360 Msa0028550:CDS 35.0%
ATCTACAGCAACAGTTGTAT+TGG + chr1_1:53526364-53526383 Msa0028550:CDS 35.0%
! AAATTTTCAGTCTCCTAAGG+AGG + chr1_1:53526448-53526467 Msa0028550:CDS 35.0%
ATCCCTAGTCAATTCCTTTA+CGG - chr1_1:53526788-53526807 None:intergenic 35.0%
!! TGGTGGTCAAGTTCTAAATT+GGG + chr1_1:53526852-53526871 Msa0028550:CDS 35.0%
AAATTGCAAAATGGTAGGGA+AGG + chr1_1:53527080-53527099 Msa0028550:intron 35.0%
!! AAGATGTCTGTGATTTGTTG+TGG + chr1_1:53527340-53527359 Msa0028550:CDS 35.0%
!! AGATGTCTGTGATTTGTTGT+GGG + chr1_1:53527341-53527360 Msa0028550:CDS 35.0%
CTGATCTCATGTCACATAAA+CGG - chr1_1:53527374-53527393 None:intergenic 35.0%
GAAGATTTGAAAGATTCCAG+AGG - chr1_1:53527492-53527511 None:intergenic 35.0%
ATTCCTGCAGACCAAATAAT+GGG - chr1_1:53527563-53527582 None:intergenic 35.0%
TAGGGAAGAACTAAAGAACA+CGG + chr1_1:53528075-53528094 Msa0028550:intron 35.0%
! GAAAAAAGCACACAAGAAGT+AGG + chr1_1:53528120-53528139 Msa0028550:intron 35.0%
GGGAATACCTAAAGAAGATA+GGG + chr1_1:53528166-53528185 Msa0028550:intron 35.0%
GGAATACCTAAAGAAGATAG+GGG + chr1_1:53528167-53528186 Msa0028550:intron 35.0%
GAATACCTAAAGAAGATAGG+GGG + chr1_1:53528168-53528187 Msa0028550:intron 35.0%
! TTTTTCCCCCTATCTTCTTT+AGG - chr1_1:53528176-53528195 None:intergenic 35.0%
AACATGAAAGGATGGAACTT+TGG + chr1_1:53528194-53528213 Msa0028550:intron 35.0%
TGGAACTTTGGATTCAAAGA+CGG + chr1_1:53528206-53528225 Msa0028550:intron 35.0%
CTCAGTAAAAGCTATCAAGA+AGG + chr1_1:53528245-53528264 Msa0028550:intron 35.0%
!!! TCTTTTAAAAAGGTGTTGGG+AGG - chr1_1:53528272-53528291 None:intergenic 35.0%
ATTCGCTTAAACTTGGTATC+TGG - chr1_1:53528740-53528759 None:intergenic 35.0%
! GACAATATATTGTTTGGTGG+TGG + chr1_1:53528917-53528936 Msa0028550:intron 35.0%
!! CAATATATTGTTTGGTGGTG+GGG + chr1_1:53528919-53528938 Msa0028550:intron 35.0%
!! GGCCGATTTATTAGCATTTT+TGG + chr1_1:53529068-53529087 Msa0028550:intron 35.0%
TGGCAATAGATTAACTGGTT+TGG - chr1_1:53529100-53529119 None:intergenic 35.0%
CCTGTATCTCAGTGAAAAAT+GGG - chr1_1:53529149-53529168 None:intergenic 35.0%
ACCTGTATCTCAGTGAAAAA+TGG - chr1_1:53529150-53529169 None:intergenic 35.0%
! TGATAGGTTGAAGTGAAACA+TGG + chr1_1:53529339-53529358 Msa0028550:intron 35.0%
! GAAGTGAAACATGGTGATTT+TGG + chr1_1:53529348-53529367 Msa0028550:CDS 35.0%
! AGAAAATCTTGGTGATTTGG+TGG + chr1_1:53529386-53529405 Msa0028550:CDS 35.0%
!!! GTTCCTTTTTCAGTAGTAGA+TGG + chr1_1:53529615-53529634 Msa0028550:intron 35.0%
GGTCGTTGTACAAAATTACA+GGG - chr1_1:53529641-53529660 None:intergenic 35.0%
TGGTCGTTGTACAAAATTAC+AGG - chr1_1:53529642-53529661 None:intergenic 35.0%
! TCAGGTGAAAACAGAAGTTT+TGG - chr1_1:53529662-53529681 None:intergenic 35.0%
! CTTCATTGATAGTTGAACTC+AGG - chr1_1:53529680-53529699 None:intergenic 35.0%
! AGGATTTATGCATTGGTCAT+TGG - chr1_1:53529703-53529722 None:intergenic 35.0%
TCTGAACCAGTATCATGTAA+AGG - chr1_1:53529765-53529784 None:intergenic 35.0%
!! ATGATACTGGTTCAGATAAC+AGG + chr1_1:53529769-53529788 Msa0028550:CDS 35.0%
! CTCAAGGGAATATCAACTTT+TGG - chr1_1:53529912-53529931 None:intergenic 35.0%
TCCAGATAAAACACACTCAA+GGG - chr1_1:53529927-53529946 None:intergenic 35.0%
ATCCAGATAAAACACACTCA+AGG - chr1_1:53529928-53529947 None:intergenic 35.0%
! TTGAGTGTGTTTTATCTGGA+TGG + chr1_1:53529927-53529946 Msa0028550:intron 35.0%
ACTCATACAACAACACGTAA+TGG - chr1_1:53529968-53529987 None:intergenic 35.0%
! AACTGAGACAATGTGCATTT+TGG + chr1_1:53530041-53530060 Msa0028550:intron 35.0%
TGTGCAGGTATGTATTAAAG+AGG + chr1_1:53530064-53530083 Msa0028550:intron 35.0%
ATCATATGGTGAAGTATGGT+TGG + chr1_1:53530101-53530120 Msa0028550:CDS 35.0%
!!! AAGTATGGTTGGCTTTTCAT+TGG + chr1_1:53530112-53530131 Msa0028550:CDS 35.0%
CTCGATGTAGTTTGACATAT+GGG - chr1_1:53530632-53530651 None:intergenic 35.0%
TCATGACATGATAGACAGAT+AGG + chr1_1:53530670-53530689 Msa0028550:intron 35.0%
ACAAAAAATGAGAAGAGACG+TGG - chr1_1:53530702-53530721 None:intergenic 35.0%
! TGTGTATGTGTTTTTCTGAG+TGG + chr1_1:53530776-53530795 Msa0028550:intron 35.0%
!!! CACTGCTTTTCTTTAAAGTG+AGG + chr1_1:53530842-53530861 Msa0028550:intron 35.0%
TTCAATAAGTTGTGGCTTCA+TGG + chr1_1:53530898-53530917 Msa0028550:intron 35.0%
TCAATAAGTTGTGGCTTCAT+GGG + chr1_1:53530899-53530918 Msa0028550:intron 35.0%
AAATGAGAAAGGATCAAAGG+AGG - chr1_1:53531277-53531296 None:intergenic 35.0%
GAGAAATGAGAAAGGATCAA+AGG - chr1_1:53531280-53531299 None:intergenic 35.0%
AATTCGCCCAATCAAAAGAA+AGG + chr1_1:53531305-53531324 Msa0028550:intron 35.0%
ATTCGCCCAATCAAAAGAAA+GGG + chr1_1:53531306-53531325 Msa0028550:intron 35.0%
!! TATCCCCCTTTCTTTTGATT+GGG - chr1_1:53531314-53531333 None:intergenic 35.0%
! ATATCCCCCTTTCTTTTGAT+TGG - chr1_1:53531315-53531334 None:intergenic 35.0%
AAAAAGTGAAGGAAGATGAG+TGG + chr1_1:53531382-53531401 Msa0028550:intron 35.0%
AAAAGTGAAGGAAGATGAGT+GGG + chr1_1:53531383-53531402 Msa0028550:intron 35.0%
TAGGATATACCGAATGTACT+TGG + chr1_1:53531492-53531511 Msa0028550:intron 35.0%
ATATACCGAATGTACTTGGA+TGG + chr1_1:53531496-53531515 Msa0028550:intron 35.0%
CAATACCATCCAAGTACATT+CGG - chr1_1:53531504-53531523 None:intergenic 35.0%
AATGTACTTGGATGGTATTG+AGG + chr1_1:53531504-53531523 Msa0028550:intron 35.0%
!! CTCTTTGGAACATTGTTTCA+AGG - chr1_1:53531536-53531555 None:intergenic 35.0%
TTTATTTAGAAGGAACCGCT+TGG - chr1_1:53531610-53531629 None:intergenic 35.0%
AAGGGAGGAGTTTATTTAGA+AGG - chr1_1:53531620-53531639 None:intergenic 35.0%
TCACCATAGAAGATTCTAGT+GGG - chr1_1:53531883-53531902 None:intergenic 35.0%
! GTTCTGTATATTGTGGACTA+GGG - chr1_1:53531950-53531969 None:intergenic 35.0%
TGTTCTGTATATTGTGGACT+AGG - chr1_1:53531951-53531970 None:intergenic 35.0%
GCTTTGTGTTCTGTATATTG+TGG - chr1_1:53531957-53531976 None:intergenic 35.0%
AACTCTTGATTGTACTGAAC+AGG + chr1_1:53532137-53532156 Msa0028550:intron 35.0%
CAAAACAAATTTCGACTGCA+AGG + chr1_1:53532315-53532334 Msa0028550:CDS 35.0%
GAACCATATTGCAAGATATG+TGG + chr1_1:53532359-53532378 Msa0028550:CDS 35.0%
! TGGCTTGTATTCAGTTATGA+AGG + chr1_1:53532411-53532430 Msa0028550:CDS 35.0%
TGGTTGAAAACAACAGAAGA+AGG + chr1_1:53532549-53532568 Msa0028550:CDS 35.0%
GGTTGAAAACAACAGAAGAA+GGG + chr1_1:53532550-53532569 Msa0028550:CDS 35.0%
AACTGGTATGTCTTCAATGT+AGG + chr1_1:53532601-53532620 Msa0028550:intron 35.0%
GTCTTCAATGTAGGTTTGTA+AGG + chr1_1:53532610-53532629 Msa0028550:intron 35.0%
CTTCAATGTAGGTTTGTAAG+GGG + chr1_1:53532612-53532631 Msa0028550:intron 35.0%
! TTGTGTTGTCGTAGTTTTCA+TGG - chr1_1:53532673-53532692 None:intergenic 35.0%
! TTTTGTCGAATCCTTATTGG+GGG - chr1_1:53532722-53532741 None:intergenic 35.0%
ATTACACGAGGTCTCATAAA+AGG - chr1_1:53532917-53532936 None:intergenic 35.0%
! AAGAGATTTGGTCTTTGACA+TGG + chr1_1:53532950-53532969 Msa0028550:intron 35.0%
ACCTCAATTAAGAAGAATGG+GGG - chr1_1:53533020-53533039 None:intergenic 35.0%
CTGCTTAACAAAGATCCTTT+GGG - chr1_1:53533120-53533139 None:intergenic 35.0%
AGCTAGCAAAGGCTTATAAA+AGG - chr1_1:53533159-53533178 None:intergenic 35.0%
CTAAAAGAAGTAGCTAGCAA+AGG - chr1_1:53533170-53533189 None:intergenic 35.0%
! CTTTGCTAGCTACTTCTTTT+AGG + chr1_1:53533168-53533187 Msa0028550:intron 35.0%
ATTAAACCTGGTAAGACATG+GGG + chr1_1:53533621-53533640 Msa0028550:intron 35.0%
CACTTGATGTAAATGCTAAG+TGG + chr1_1:53533758-53533777 Msa0028550:intron 35.0%
!! TGAAGACAGGTTGATTAAGA+GGG - chr1_1:53533849-53533868 None:intergenic 35.0%
!! ATGAAGACAGGTTGATTAAG+AGG - chr1_1:53533850-53533869 None:intergenic 35.0%
TAGAAACCCAAAATGAAGAC+AGG - chr1_1:53533862-53533881 None:intergenic 35.0%
TATTATGGACCGCAGAAAAA+GGG - chr1_1:53534014-53534033 None:intergenic 35.0%
TTATTATGGACCGCAGAAAA+AGG - chr1_1:53534015-53534034 None:intergenic 35.0%
!! CACAGATTGCAGTCTTATTA+TGG - chr1_1:53534029-53534048 None:intergenic 35.0%
TCACAGATACATACATCTGA+GGG - chr1_1:53534053-53534072 None:intergenic 35.0%
TTCACAGATACATACATCTG+AGG - chr1_1:53534054-53534073 None:intergenic 35.0%
! TACTTCACCATACATTTTGG+TGG - chr1_1:53534242-53534261 None:intergenic 35.0%
CACAGTATGCACACAAAATA+TGG - chr1_1:53534403-53534422 None:intergenic 35.0%
! CCCAATGTGTTTCATAGTTT+TGG + chr1_1:53534480-53534499 Msa0028550:intron 35.0%
AAAAGAGGAAATCCATTAGC+AGG - chr1_1:53534522-53534541 None:intergenic 35.0%
TTAACTCAAAATTTGGGGGT+GGG - chr1_1:53534583-53534602 None:intergenic 35.0%
!!! CCCCAAATTTTGAGTTAAGT+TGG + chr1_1:53534585-53534604 Msa0028550:intron 35.0%
!! TTAAGTTGGAGAATGACTGA+TGG + chr1_1:53534599-53534618 Msa0028550:intron 35.0%
GGATCATCAAGATAAATTGG+TGG - chr1_1:53534721-53534740 None:intergenic 35.0%
!! ATCAATAAGAGTACCCATCT+AGG + chr1_1:53534877-53534896 Msa0028550:intron 35.0%
!! TCAATAAGAGTACCCATCTA+GGG + chr1_1:53534878-53534897 Msa0028550:intron 35.0%
TTCAGCACATCTATTCATAG+TGG + chr1_1:53535004-53535023 Msa0028550:intron 35.0%
TCAGCACATCTATTCATAGT+GGG + chr1_1:53535005-53535024 Msa0028550:intron 35.0%
TAGTTATGTATCAGTGGATC+CGG + chr1_1:53535036-53535055 Msa0028550:intron 35.0%
CAAAATGTCACCATAACTGA+CGG - chr1_1:53535070-53535089 None:intergenic 35.0%
! AGTTATGGTGACATTTTGCA+CGG + chr1_1:53535072-53535091 Msa0028550:intron 35.0%
GTCCAAATGTACTGTAAGAA+AGG - chr1_1:53535160-53535179 None:intergenic 35.0%
TGAGACTTATCCATGTTATC+TGG + chr1_1:53535181-53535200 Msa0028550:intron 35.0%
! TTTTCATGCACCAGATAACA+TGG - chr1_1:53535194-53535213 None:intergenic 35.0%
CCTGATACAATCTTTAATCC+GGG + chr1_1:53535235-53535254 Msa0028550:intron 35.0%
GATATCAATTGAACTAAGCC+CGG - chr1_1:53535256-53535275 None:intergenic 35.0%
ACAATGATAGCAGTACAACT+GGG + chr1_1:53535369-53535388 Msa0028550:intron 35.0%
!! GTCCTTTTTCTGTTTCTTGT+AGG + chr1_1:53535492-53535511 Msa0028550:intron 35.0%
!! TGTAGGCGTATTATTGACTT+TGG + chr1_1:53535509-53535528 Msa0028550:intron 35.0%
!! CGTATTATTGACTTTGGAAG+TGG + chr1_1:53535515-53535534 Msa0028550:CDS 35.0%
TGAGCAATAAGATACCTAGA+AGG - chr1_1:53535584-53535603 None:intergenic 35.0%
AAGCTTTGCTAAATGCTACA+TGG + chr1_1:53535717-53535736 Msa0028550:CDS 35.0%
CTAAATGCTACATGGTATCA+AGG + chr1_1:53535725-53535744 Msa0028550:CDS 35.0%
TACTTCAAAGTTGAGCTTGA+TGG - chr1_1:53535752-53535771 None:intergenic 35.0%
! GATTTTGCATGATTGTTTGG+TGG + chr1_1:53535819-53535838 Msa0028550:intron 35.0%
AGCAATCTTTCTGCTATTAC+AGG + chr1_1:53535878-53535897 Msa0028550:intron 35.0%
! TGATGTTAGAGATGGTCTTA+GGG + chr1_1:53535926-53535945 Msa0028550:CDS 35.0%
! CACGTGTTAAAGCATTTATC+TGG - chr1_1:53535966-53535985 None:intergenic 35.0%
! AAGTAAGTGTGCCTTTTAGA+AGG + chr1_1:53536042-53536061 Msa0028550:intron 35.0%
CAGTGCATTCACTATGAAAT+TGG - chr1_1:53536169-53536188 None:intergenic 35.0%
AGCGATAATATAGATTCCAG+AGG - chr1_1:53536328-53536347 None:intergenic 35.0%
AATTGTGCATCTTAATCCCT+GGG + chr1_1:53536391-53536410 Msa0028550:CDS 35.0%
AGTAAGTTTACCTTCTTAGC+CGG + chr1_1:53536452-53536471 Msa0028550:intron 35.0%
AGTAATAAGCACCTGAACTT+TGG - chr1_1:53536693-53536712 None:intergenic 35.0%
ATGTTTATCAACAACCGTTG+TGG + chr1_1:53536866-53536885 Msa0028550:intron 35.0%
TCAAAGCTCAAATAACCTTG+AGG + chr1_1:53536935-53536954 Msa0028550:intron 35.0%
! TCAACGCATTTTAAACCTCA+AGG - chr1_1:53536953-53536972 None:intergenic 35.0%
TCAGTAATGCAGTTTAGGTA+GGG - chr1_1:53537029-53537048 None:intergenic 35.0%
ATCAGTAATGCAGTTTAGGT+AGG - chr1_1:53537030-53537049 None:intergenic 35.0%
TACCTAAACTGCATTACTGA+TGG + chr1_1:53537029-53537048 Msa0028550:intron 35.0%
TTCCATCAGTAATGCAGTTT+AGG - chr1_1:53537034-53537053 None:intergenic 35.0%
AGAAACATGGACCAAAATCT+TGG + chr1_1:53537131-53537150 Msa0028550:intron 35.0%
! GGGAAAGAAATCCAAGATTT+TGG - chr1_1:53537145-53537164 None:intergenic 35.0%
AATCTTGGATTTCTTTCCCT+TGG + chr1_1:53537146-53537165 Msa0028550:intron 35.0%
ATCTTGGATTTCTTTCCCTT+GGG + chr1_1:53537147-53537166 Msa0028550:intron 35.0%
! TCTAGATTAGTCCATTCCAA+TGG + chr1_1:53537201-53537220 Msa0028550:intron 35.0%
ATGTTTGTGAACCATAGAGA+TGG - chr1_1:53537318-53537337 None:intergenic 35.0%
CACAAACATGCTTTAGTTGT+TGG + chr1_1:53537329-53537348 Msa0028550:intron 35.0%
GCTAGAGATCCTCTTAAAAT+AGG + chr1_1:53537482-53537501 Msa0028550:CDS 35.0%
AGATCCTCTTAAAATAGGGT+TGG + chr1_1:53537487-53537506 Msa0028550:intron 35.0%
!! TTGCAGTTTTTCAGACATCT+GGG + chr1_1:53537602-53537621 Msa0028550:intron 35.0%
AAGTTATCAGGAAACTTACC+GGG - chr1_1:53537662-53537681 None:intergenic 35.0%
ATCTAAACTATTTGCCATCC+TGG + chr1_1:53537742-53537761 Msa0028550:intron 35.0%
! TTTTAATGCTAAGACCAGGA+TGG - chr1_1:53537759-53537778 None:intergenic 35.0%
! CTCTCTTTATATTTTGCAGG+AGG + chr1_1:53538025-53538044 Msa0028550:intron 35.0%
GGGTTTCTCTCTAAATCTAA+AGG + chr1_1:53538244-53538263 Msa0028550:three_prime_UTR 35.0%
AGCTACATTGTGCAAATACA+TGG + chr1_1:53538370-53538389 Msa0028550:three_prime_UTR 35.0%
ACGACATGTAGCCAAAATAA+TGG + chr1_1:53538432-53538451 Msa0028550:three_prime_UTR 35.0%
!!! TTTGGTCGTATCGGTTATTT+TGG - chr1_1:53538472-53538491 None:intergenic 35.0%
!! GTTCTTCTTTTTGGTCGTAT+CGG - chr1_1:53538481-53538500 None:intergenic 35.0%
AGTGAGGAATGATTACCGTT+AGG - chr1_1:53524710-53524729 None:intergenic 40.0%
ACACTCTATGCTGAAAAGTG+AGG - chr1_1:53524726-53524745 None:intergenic 40.0%
GGATGAGGAACTGAAAATTG+AGG - chr1_1:53524767-53524786 None:intergenic 40.0%
GGTTAAGCATGTGGATGATT+CGG - chr1_1:53524865-53524884 None:intergenic 40.0%
TTAACCGTTTACAAACACGG+TGG + chr1_1:53524879-53524898 Msa0028550:CDS 40.0%
! CTTGAGATTTTCTTCGACCT+TGG - chr1_1:53525004-53525023 None:intergenic 40.0%
AGGTCGAAGAAAATCTCAAG+AGG + chr1_1:53525004-53525023 Msa0028550:CDS 40.0%
ATTAGGTGCAATGGGGATTA+AGG + chr1_1:53525359-53525378 Msa0028550:intron 40.0%
AATGGGGATTAAGGAAGTTG+TGG + chr1_1:53525368-53525387 Msa0028550:CDS 40.0%
GGATTAAGGAAGTTGTGGTT+GGG + chr1_1:53525373-53525392 Msa0028550:CDS 40.0%
GTTATATCGAAAGCTTCGAC+AGG + chr1_1:53525510-53525529 Msa0028550:CDS 40.0%
CATAGACGGAAAGAGATGTT+AGG + chr1_1:53525576-53525595 Msa0028550:CDS 40.0%
ATGTATTCTGCAACCTGGAA+AGG - chr1_1:53526129-53526148 None:intergenic 40.0%
AAACTATGAAGGAAGCCTCT+AGG + chr1_1:53526324-53526343 Msa0028550:intron 40.0%
TTGCTGTAGATCCTGAATGA+AGG - chr1_1:53526355-53526374 None:intergenic 40.0%
!! TGATGGTTCTGTTTCTGTGT+GGG + chr1_1:53526714-53526733 Msa0028550:CDS 40.0%
!! TACAGATTAGCTTCTTCCCA+AGG + chr1_1:53526748-53526767 Msa0028550:CDS 40.0%
!! ACAGATTAGCTTCTTCCCAA+GGG + chr1_1:53526749-53526768 Msa0028550:CDS 40.0%
! GCTCACTAATTTTGCCGTAA+AGG + chr1_1:53526771-53526790 Msa0028550:CDS 40.0%
TTGCCGTAAAGGAATTGACT+AGG + chr1_1:53526782-53526801 Msa0028550:CDS 40.0%
TGCCGTAAAGGAATTGACTA+GGG + chr1_1:53526783-53526802 Msa0028550:CDS 40.0%
!! CTGGTGGTCAAGTTCTAAAT+TGG + chr1_1:53526851-53526870 Msa0028550:CDS 40.0%
!! GGTGGTCAAGTTCTAAATTG+GGG + chr1_1:53526853-53526872 Msa0028550:CDS 40.0%
ATGGTCAGTTGGCTATAACA+CGG + chr1_1:53526893-53526912 Msa0028550:CDS 40.0%
TTGGCGACGTGTTCTTTAAA+AGG + chr1_1:53526920-53526939 Msa0028550:CDS 40.0%
! CGACGTGTTCTTTAAAAGGT+AGG + chr1_1:53526924-53526943 Msa0028550:intron 40.0%
! TCTTTAAAAGGTAGGTTCGG+CGG + chr1_1:53526932-53526951 Msa0028550:intron 40.0%
TAGCTATCGTTAGCAGTTAG+AGG - chr1_1:53527276-53527295 None:intergenic 40.0%
AACTGCTAACGATAGCTACT+TGG + chr1_1:53527278-53527297 Msa0028550:CDS 40.0%
TGCCTTAAAAAAGGGCAGTA+TGG + chr1_1:53527443-53527462 Msa0028550:CDS 40.0%
!!! GTCCATACTGCCCTTTTTTA+AGG - chr1_1:53527448-53527467 None:intergenic 40.0%
AAAGGGCAGTATGGACAATA+TGG + chr1_1:53527452-53527471 Msa0028550:CDS 40.0%
AAGAAGCTACACTGAAAACG+AGG + chr1_1:53527527-53527546 Msa0028550:CDS 40.0%
GATGCAGGTTTCCCATTATT+TGG + chr1_1:53527549-53527568 Msa0028550:CDS 40.0%
TTTCCCATTATTTGGTCTGC+AGG + chr1_1:53527557-53527576 Msa0028550:CDS 40.0%
GATTCCTGCAGACCAAATAA+TGG - chr1_1:53527564-53527583 None:intergenic 40.0%
AGAAGCTCAGGTATGTTTCA+TGG + chr1_1:53527591-53527610 Msa0028550:intron 40.0%
GAAGCTCAGGTATGTTTCAT+GGG + chr1_1:53527592-53527611 Msa0028550:intron 40.0%
ATCATAGGGAGGAAATCTTG+AGG - chr1_1:53527659-53527678 None:intergenic 40.0%
CATTAGCAATCATCATAGGG+AGG - chr1_1:53527670-53527689 None:intergenic 40.0%
GCAAAGGATTTGAAAACTGC+AGG - chr1_1:53527804-53527823 None:intergenic 40.0%
TAATTCGTGCAGTGAAGCAA+AGG - chr1_1:53527820-53527839 None:intergenic 40.0%
AGGGAAGAACTAAAGAACAC+GGG + chr1_1:53528076-53528095 Msa0028550:intron 40.0%
CAAGAAGTAGGGTATATGAC+TGG + chr1_1:53528132-53528151 Msa0028550:intron 40.0%
CGGGAATACCTAAAGAAGAT+AGG + chr1_1:53528165-53528184 Msa0028550:intron 40.0%
GATAGGGGGAAAAACATGAA+AGG + chr1_1:53528182-53528201 Msa0028550:intron 40.0%
GGAACTTTGGATTCAAAGAC+GGG + chr1_1:53528207-53528226 Msa0028550:intron 40.0%
TGCACAGAGATGCACATAAT+AGG + chr1_1:53528407-53528426 Msa0028550:intron 40.0%
TTCTGTCCGAGTATAGAACT+TGG - chr1_1:53528567-53528586 None:intergenic 40.0%
! TTTGGAACTTACTCAGCCAA+TGG + chr1_1:53528674-53528693 Msa0028550:intron 40.0%
ACTTGGTATCTGGCAGATTA+GGG - chr1_1:53528730-53528749 None:intergenic 40.0%
AACTTGGTATCTGGCAGATT+AGG - chr1_1:53528731-53528750 None:intergenic 40.0%
!! CCCATTTTTCACTGAGATAC+AGG + chr1_1:53529146-53529165 Msa0028550:intron 40.0%
!! GTGATTTGGTGGATTCTAAG+TGG + chr1_1:53529397-53529416 Msa0028550:CDS 40.0%
GCTTGCCAAAAAAGATGACT+GGG + chr1_1:53529419-53529438 Msa0028550:CDS 40.0%
!!! GTCTTCCCAGTCATCTTTTT+TGG - chr1_1:53529427-53529446 None:intergenic 40.0%
!! CTTACCAGCTTGTTGATGAA+GGG - chr1_1:53529484-53529503 None:intergenic 40.0%
GACCAATGCATAAATCCTGA+AGG + chr1_1:53529705-53529724 Msa0028550:CDS 40.0%
AGCCTTCAGGATTTATGCAT+TGG - chr1_1:53529710-53529729 None:intergenic 40.0%
ATAAAACTGGCAAAGCCTTC+AGG - chr1_1:53529723-53529742 None:intergenic 40.0%
!! GAAGGCTTTGCCAGTTTTAT+TGG + chr1_1:53529723-53529742 Msa0028550:CDS 40.0%
TGGTTGCTAGTAAAAGACAC+AGG + chr1_1:53529875-53529894 Msa0028550:intron 40.0%
! TCCCTTGAGTGTGTTTTATC+TGG + chr1_1:53529923-53529942 Msa0028550:intron 40.0%
TGCACATTGTCTCAGTTGTT+GGG - chr1_1:53530038-53530057 None:intergenic 40.0%
ATGCACATTGTCTCAGTTGT+TGG - chr1_1:53530039-53530058 None:intergenic 40.0%
!! TTAAAGAGGAGTTTTGGTCG+TGG + chr1_1:53530078-53530097 Msa0028550:CDS 40.0%
!! AGTTTTGGTCGTGGATCATA+TGG + chr1_1:53530087-53530106 Msa0028550:CDS 40.0%
GTGGATCATATGGTGAAGTA+TGG + chr1_1:53530097-53530116 Msa0028550:CDS 40.0%
ATGTACAGGGTGTAGTTAGA+AGG - chr1_1:53530228-53530247 None:intergenic 40.0%
TCGGTTTATCAGGATCTCTT+TGG + chr1_1:53530303-53530322 Msa0028550:intron 40.0%
CGGTTTATCAGGATCTCTTT+GGG + chr1_1:53530304-53530323 Msa0028550:intron 40.0%
AAGCCTCTAAATAAAGCCCA+GGG - chr1_1:53530455-53530474 None:intergenic 40.0%
! TGTGGATTATTTAGCCCAAG+AGG + chr1_1:53530528-53530547 Msa0028550:intron 40.0%
! GTGGATTATTTAGCCCAAGA+GGG + chr1_1:53530529-53530548 Msa0028550:intron 40.0%
AAAAAATTTGGGGGTGACCA+TGG - chr1_1:53530596-53530615 None:intergenic 40.0%
CCTCGATGTAGTTTGACATA+TGG - chr1_1:53530633-53530652 None:intergenic 40.0%
CCATATGTCAAACTACATCG+AGG + chr1_1:53530630-53530649 Msa0028550:intron 40.0%
TCTGTCTATCATGTCATGAG+TGG - chr1_1:53530669-53530688 None:intergenic 40.0%
GCACCAACAAAGACAAAAGA+AGG - chr1_1:53530967-53530986 None:intergenic 40.0%
TTCGCCCAATCAAAAGAAAG+GGG + chr1_1:53531307-53531326 Msa0028550:intron 40.0%
GAACTGAATACTGTTAGGAC+TGG + chr1_1:53531457-53531476 Msa0028550:intron 40.0%
! GGACTGGTATCTAAATCACT+AGG + chr1_1:53531473-53531492 Msa0028550:intron 40.0%
CTAATAAGAGGTTACACGGA+AGG + chr1_1:53531770-53531789 Msa0028550:intron 40.0%
TTACACGGAAGGCCATTTAT+GGG + chr1_1:53531781-53531800 Msa0028550:intron 40.0%
TCACCCACTAGAATCTTCTA+TGG + chr1_1:53531877-53531896 Msa0028550:intron 40.0%
CTCACCATAGAAGATTCTAG+TGG - chr1_1:53531884-53531903 None:intergenic 40.0%
GACAACAATGCAGCTTACAT+AGG - chr1_1:53531912-53531931 None:intergenic 40.0%
! GGGAAGTTTTTGTGTTCAGT+AGG + chr1_1:53532073-53532092 Msa0028550:intron 40.0%
TGTACTGAACAGGTAGAGAA+AGG + chr1_1:53532147-53532166 Msa0028550:intron 40.0%
GTACTGAACAGGTAGAGAAA+GGG + chr1_1:53532148-53532167 Msa0028550:intron 40.0%
CAAGGAGCCATATATGAAGA+AGG + chr1_1:53532333-53532352 Msa0028550:CDS 40.0%
!! ATGTGGAATCTTTTGAGTCC+CGG + chr1_1:53532376-53532395 Msa0028550:CDS 40.0%
AAGCCATATTTCATTGGACC+GGG - chr1_1:53532397-53532416 None:intergenic 40.0%
CAAGCCATATTTCATTGGAC+CGG - chr1_1:53532398-53532417 None:intergenic 40.0%
TTGCTCAAGTCTTTCGTTCT+CGG - chr1_1:53532487-53532506 None:intergenic 40.0%
AAGACTTGAGCAAGTGAAAC+AGG + chr1_1:53532494-53532513 Msa0028550:CDS 40.0%
TTGAGCAAGTGAAACAGGTT+CGG + chr1_1:53532499-53532518 Msa0028550:CDS 40.0%
TTTGTCGAATCCTTATTGGG+GGG - chr1_1:53532721-53532740 None:intergenic 40.0%
! CTTTTCCACATTCATTGGGT+GGG - chr1_1:53532829-53532848 None:intergenic 40.0%
! ACTTTTCCACATTCATTGGG+TGG - chr1_1:53532830-53532849 None:intergenic 40.0%
TTTCTCAAAGGGAGGATACA+TGG + chr1_1:53532857-53532876 Msa0028550:intron 40.0%
! GCTTTGGCTTCTAAGAGATT+TGG + chr1_1:53532938-53532957 Msa0028550:intron 40.0%
GCTGCTTAACAAAGATCCTT+TGG - chr1_1:53533121-53533140 None:intergenic 40.0%
AACTGCTTTATGTGCAGCTA+AGG + chr1_1:53533281-53533300 Msa0028550:intron 40.0%
CATGAAAAGACAAGACAGAG+AGG - chr1_1:53533344-53533363 None:intergenic 40.0%
!! CAGTCTTGTTTGAATCGGTT+TGG - chr1_1:53533423-53533442 None:intergenic 40.0%
TATCCCTGTGTGTGATATTG+CGG - chr1_1:53533602-53533621 None:intergenic 40.0%
ACACACAGGGATATTAAACC+TGG + chr1_1:53533609-53533628 Msa0028550:CDS 40.0%
TTAAACCTGGTAAGACATGG+GGG + chr1_1:53533622-53533641 Msa0028550:intron 40.0%
TCTACATGCATACATCCCTT+AGG - chr1_1:53533660-53533679 None:intergenic 40.0%
CGTAAAAGTCTTCCTGCTAA+TGG + chr1_1:53534507-53534526 Msa0028550:intron 40.0%
TAACTCAAAATTTGGGGGTG+GGG - chr1_1:53534582-53534601 None:intergenic 40.0%
CTTAACTCAAAATTTGGGGG+TGG - chr1_1:53534584-53534603 None:intergenic 40.0%
TCAAAGTTGGCCAACTAAGT+TGG + chr1_1:53534802-53534821 Msa0028550:intron 40.0%
CAAAGTTGGCCAACTAAGTT+GGG + chr1_1:53534803-53534822 Msa0028550:intron 40.0%
GATGCACATTTAGTGTTCCT+TGG + chr1_1:53534980-53534999 Msa0028550:intron 40.0%
GAATAGATGTGCTGAAACCA+AGG - chr1_1:53535000-53535019 None:intergenic 40.0%
AGTTATGTATCAGTGGATCC+GGG + chr1_1:53535037-53535056 Msa0028550:intron 40.0%
GTAGAATTGCAATGCTTGCA+TGG + chr1_1:53535106-53535125 Msa0028550:intron 40.0%
CCCGGATTAAAGATTGTATC+AGG - chr1_1:53535238-53535257 None:intergenic 40.0%
AAGCAGGAGATAGTCAAACA+TGG - chr1_1:53535278-53535297 None:intergenic 40.0%
GACAATGATAGCAGTACAAC+TGG + chr1_1:53535368-53535387 Msa0028550:intron 40.0%
CGCCTACAAGAAACAGAAAA+AGG - chr1_1:53535497-53535516 None:intergenic 40.0%
GTAGCATTTAGCAAAGCTTC+AGG - chr1_1:53535716-53535735 None:intergenic 40.0%
GCTATTACAGGTATGACATG+TGG + chr1_1:53535890-53535909 Msa0028550:intron 40.0%
!! TGGTGTTGTGATGTTAGAGA+TGG + chr1_1:53535918-53535937 Msa0028550:CDS 40.0%
GTGATGTTAGAGATGGTCTT+AGG + chr1_1:53535925-53535944 Msa0028550:CDS 40.0%
! TGCTTTAACACGTGCTCTTT+TGG + chr1_1:53535972-53535991 Msa0028550:CDS 40.0%
! TAACACGTGCTCTTTTGGAT+CGG + chr1_1:53535977-53535996 Msa0028550:CDS 40.0%
AAACCATCAGCAAGCAATCT+TGG - chr1_1:53536231-53536250 None:intergenic 40.0%
GACTTGCATATTTGAACCTC+TGG + chr1_1:53536309-53536328 Msa0028550:intron 40.0%
CATGAACGATCTAAGTCTGT+CGG - chr1_1:53536370-53536389 None:intergenic 40.0%
GAATTGTGCATCTTAATCCC+TGG + chr1_1:53536390-53536409 Msa0028550:CDS 40.0%
ATTGTGCATCTTAATCCCTG+GGG + chr1_1:53536392-53536411 Msa0028550:CDS 40.0%
GTAAGTTTACCTTCTTAGCC+GGG + chr1_1:53536453-53536472 Msa0028550:intron 40.0%
TAATTCCCCTAAAAGATGGC+TGG + chr1_1:53536820-53536839 Msa0028550:intron 40.0%
! ATGCATCCAGCCATCTTTTA+GGG - chr1_1:53536829-53536848 None:intergenic 40.0%
! TATGCATCCAGCCATCTTTT+AGG - chr1_1:53536830-53536849 None:intergenic 40.0%
GTTCAACCTAGTCAGAAACA+TGG + chr1_1:53537118-53537137 Msa0028550:intron 40.0%
! TTTGGTCCATGTTTCTGACT+AGG - chr1_1:53537127-53537146 None:intergenic 40.0%
TCTTGGATTTCTTTCCCTTG+GGG + chr1_1:53537148-53537167 Msa0028550:intron 40.0%
TTCAAGTCAATCTTCCCCAA+GGG - chr1_1:53537165-53537184 None:intergenic 40.0%
AGTCCATTCCAATGGTTCAT+AGG + chr1_1:53537209-53537228 Msa0028550:intron 40.0%
!!! GTTACTTTTGTCTCAACGCA+AGG - chr1_1:53537250-53537269 None:intergenic 40.0%
CTTCTCACAAAAGCCAACAT+TGG + chr1_1:53537279-53537298 Msa0028550:intron 40.0%
TTTGTTTCGCGTTCCAATGT+TGG - chr1_1:53537295-53537314 None:intergenic 40.0%
! GAATTCTTCAGAGCATTTCC+AGG - chr1_1:53537444-53537463 None:intergenic 40.0%
GAAGAGAACAACTGCTTCAT+AGG - chr1_1:53537564-53537583 None:intergenic 40.0%
!! CTTGCAGTTTTTCAGACATC+TGG + chr1_1:53537601-53537620 Msa0028550:intron 40.0%
TTTCAGACATCTGGGCTTTA+CGG + chr1_1:53537610-53537629 Msa0028550:CDS 40.0%
TGGTCAACAACTGCTTTAGT+TGG + chr1_1:53537973-53537992 Msa0028550:intron 40.0%
GGTCAACAACTGCTTTAGTT+GGG + chr1_1:53537974-53537993 Msa0028550:intron 40.0%
GGTAGTGTTGTATCTGATGA+AGG + chr1_1:53537995-53538014 Msa0028550:intron 40.0%
CTGCACAATTATCTTCTTGG+CGG - chr1_1:53538098-53538117 None:intergenic 40.0%
CTCCTGCACAATTATCTTCT+TGG - chr1_1:53538101-53538120 None:intergenic 40.0%
CAAGAAGATAATTGTGCAGG+AGG + chr1_1:53538099-53538118 Msa0028550:exon 40.0%
!! GAATTTTTCAGTGCAAGCAC+CGG - chr1_1:53538131-53538150 None:intergenic 40.0%
TAGATTTAGAGAGAAACCCC+TGG - chr1_1:53538243-53538262 None:intergenic 40.0%
GATGCATTCAGTGATGTGTT+TGG - chr1_1:53538309-53538328 None:intergenic 40.0%
ACGGGAACAATATCAATGAC+AGG + chr1_1:53538611-53538630 Msa0028550:three_prime_UTR 40.0%
! GACAGGTTTTGCAAACCATT+TGG + chr1_1:53538628-53538647 Msa0028550:three_prime_UTR 40.0%
GGCACTCACAGAACAAATAC+TGG + chr1_1:53524644-53524663 Msa0028550:five_prime_UTR 45.0%
TCACAGAACAAATACTGGCG+CGG + chr1_1:53524649-53524668 Msa0028550:five_prime_UTR 45.0%
!! ACCATTTGGTTTGGCGCAAT+CGG + chr1_1:53524674-53524693 Msa0028550:five_prime_UTR 45.0%
AAGCACTTCTTCATCGCGTT+AGG + chr1_1:53524801-53524820 Msa0028550:CDS 45.0%
AGCACTTCTTCATCGCGTTA+GGG + chr1_1:53524802-53524821 Msa0028550:CDS 45.0%
GACGAGAATTGTGATCGAAG+AGG - chr1_1:53524947-53524966 None:intergenic 45.0%
GAAATGGAATGCGAAGATCG+AGG - chr1_1:53525046-53525065 None:intergenic 45.0%
GATCTTCGCATTCCATTTCC+CGG + chr1_1:53525047-53525066 Msa0028550:CDS 45.0%
GGGATTAAGGAAGTTGTGGT+TGG + chr1_1:53525372-53525391 Msa0028550:CDS 45.0%
! GCGGTTTTCGATGGTCATAA+CGG + chr1_1:53525402-53525421 Msa0028550:CDS 45.0%
TTTCGATGGTCATAACGGTG+CGG + chr1_1:53525407-53525426 Msa0028550:CDS 45.0%
TCGACAGGAACATTGCTTCA+TGG + chr1_1:53525525-53525544 Msa0028550:CDS 45.0%
CGACAGGAACATTGCTTCAT+GGG + chr1_1:53525526-53525545 Msa0028550:CDS 45.0%
GGAACATTGCTTCATGGGAA+AGG + chr1_1:53525531-53525550 Msa0028550:CDS 45.0%
GACGGAAAGAGATGTTAGGT+TGG + chr1_1:53525580-53525599 Msa0028550:CDS 45.0%
CTTCTGATCGAACGCAAGTT+CGG - chr1_1:53525835-53525854 None:intergenic 45.0%
TGCCAATATTGGAGACTCCA+AGG + chr1_1:53526409-53526428 Msa0028550:CDS 45.0%
AGCCTTGGAGTCTCCAATAT+TGG - chr1_1:53526414-53526433 None:intergenic 45.0%
TTCAGAGCACAAGAAAGCCT+TGG - chr1_1:53526429-53526448 None:intergenic 45.0%
TTCTCACCTTTAGCCTCCTT+AGG - chr1_1:53526464-53526483 None:intergenic 45.0%
!! GTGATGGTTCTGTTTCTGTG+TGG + chr1_1:53526713-53526732 Msa0028550:CDS 45.0%
GGCAAAATTAGTGAGCCCTT+GGG - chr1_1:53526767-53526786 None:intergenic 45.0%
GTTCTTTCATCCTCTCTGTC+TGG - chr1_1:53526817-53526836 None:intergenic 45.0%
AGAGGATGAAAGAACTCGTG+TGG + chr1_1:53526822-53526841 Msa0028550:CDS 45.0%
!! GGTCAAGTTCTAAATTGGGG+CGG + chr1_1:53526856-53526875 Msa0028550:CDS 45.0%
TGGTCAGTTGGCTATAACAC+GGG + chr1_1:53526894-53526913 Msa0028550:CDS 45.0%
! TTGGCTATAACACGGGCTAT+TGG + chr1_1:53526901-53526920 Msa0028550:CDS 45.0%
! AACCAAAGCACTAATGCGTG+TGG + chr1_1:53527120-53527139 Msa0028550:intron 45.0%
! ACCAAAGCACTAATGCGTGT+GGG + chr1_1:53527121-53527140 Msa0028550:intron 45.0%
TGCTAACGATAGCTACTTGG+TGG + chr1_1:53527281-53527300 Msa0028550:CDS 45.0%
TACACTGAAAACGAGGATGC+AGG + chr1_1:53527534-53527553 Msa0028550:CDS 45.0%
GAATCTGCTTACAGAAGCTC+AGG + chr1_1:53527579-53527598 Msa0028550:CDS 45.0%
GGATTTGAAAACTGCAGGAG+AGG - chr1_1:53527799-53527818 None:intergenic 45.0%
AGTTTGTGTGAAGGAGCAGT+AGG - chr1_1:53527869-53527888 None:intergenic 45.0%
AACTAAAGAACACGGGAGCA+TGG + chr1_1:53528083-53528102 Msa0028550:intron 45.0%
! ATATGACTGGCTGACAGTCA+CGG + chr1_1:53528145-53528164 Msa0028550:intron 45.0%
GGGGGAAAAACATGAAAGGA+TGG + chr1_1:53528186-53528205 Msa0028550:intron 45.0%
CTCTTCTCCTTAACGAAGCT+GGG - chr1_1:53528339-53528358 None:intergenic 45.0%
TCTCTTCTCCTTAACGAAGC+TGG - chr1_1:53528340-53528359 None:intergenic 45.0%
! CATGTCACACAGAGCTTGTT+CGG - chr1_1:53528387-53528406 None:intergenic 45.0%
TCGATCAGAGGTGATACCAT+TGG - chr1_1:53528693-53528712 None:intergenic 45.0%
TGGTGGGGTGCATAAATAGT+AGG + chr1_1:53528934-53528953 Msa0028550:intron 45.0%
GGCTTGCCAAAAAAGATGAC+TGG + chr1_1:53529418-53529437 Msa0028550:CDS 45.0%
!! TGATGAAGGGCATCTGGTAT+AGG - chr1_1:53529471-53529490 None:intergenic 45.0%
!! GCTTACCAGCTTGTTGATGA+AGG - chr1_1:53529485-53529504 None:intergenic 45.0%
GGGCCATCTACTACTGAAAA+AGG - chr1_1:53529621-53529640 None:intergenic 45.0%
CGTAATGGCAGTGATAGTAC+TGG - chr1_1:53529953-53529972 None:intergenic 45.0%
!! CAATGTGCATTTTGGTGTGC+AGG + chr1_1:53530049-53530068 Msa0028550:intron 45.0%
CTCAAGTAATCCTGAGTGTC+AGG + chr1_1:53530197-53530216 Msa0028550:CDS 45.0%
AGTAATCCTGAGTGTCAGGA+TGG + chr1_1:53530201-53530220 Msa0028550:CDS 45.0%
AAATTACGATCTGCACTCCC+TGG + chr1_1:53530435-53530454 Msa0028550:intron 45.0%
AATTACGATCTGCACTCCCT+GGG + chr1_1:53530436-53530455 Msa0028550:intron 45.0%
!! ACTCCCTGGGCTTTATTTAG+AGG + chr1_1:53530449-53530468 Msa0028550:intron 45.0%
CAAGCCTCTAAATAAAGCCC+AGG - chr1_1:53530456-53530475 None:intergenic 45.0%
!! TGTCATGAGTGGTGTTACGA+GGG - chr1_1:53530658-53530677 None:intergenic 45.0%
!! ATGTCATGAGTGGTGTTACG+AGG - chr1_1:53530659-53530678 None:intergenic 45.0%
ACACAGTAGCAGTCTAGCAA+AGG - chr1_1:53530759-53530778 None:intergenic 45.0%
! GTTGTGACTTGTGAGTCGTT+TGG + chr1_1:53530798-53530817 Msa0028550:intron 45.0%
TTTGCCTCCATCGAGTTCAA+AGG + chr1_1:53531145-53531164 Msa0028550:intron 45.0%
TAGAATAAGGCAAGCTGCCA+GGG - chr1_1:53531181-53531200 None:intergenic 45.0%
ATAGAATAAGGCAAGCTGCC+AGG - chr1_1:53531182-53531201 None:intergenic 45.0%
TCAGCTTCTGTTGTGCACTT+TGG + chr1_1:53531244-53531263 Msa0028550:intron 45.0%
CAGCTTCTGTTGTGCACTTT+GGG + chr1_1:53531245-53531264 Msa0028550:intron 45.0%
TCGCCCAATCAAAAGAAAGG+GGG + chr1_1:53531308-53531327 Msa0028550:intron 45.0%
TAGAAGGAACCGCTTGGTTA+AGG - chr1_1:53531604-53531623 None:intergenic 45.0%
GTTACACGGAAGGCCATTTA+TGG + chr1_1:53531780-53531799 Msa0028550:intron 45.0%
TACACGGAAGGCCATTTATG+GGG + chr1_1:53531782-53531801 Msa0028550:intron 45.0%
AGCTGCATTGTTGTCTGATG+AGG + chr1_1:53531917-53531936 Msa0028550:intron 45.0%
TTGTTGTCTGATGAGGTCCA+AGG + chr1_1:53531924-53531943 Msa0028550:intron 45.0%
!! TATATTGTGGACTAGGGCCT+TGG - chr1_1:53531944-53531963 None:intergenic 45.0%
GGTCTGCTGTGTACTTAAGT+GGG + chr1_1:53532169-53532188 Msa0028550:CDS 45.0%
!! TGTGTACTTAAGTGGGCTGA+GGG + chr1_1:53532176-53532195 Msa0028550:CDS 45.0%
! GGGCTGAGGGAAAAACATTT+TGG + chr1_1:53532189-53532208 Msa0028550:CDS 45.0%
CACATCTTCAAAGCACATGG+AGG - chr1_1:53532232-53532251 None:intergenic 45.0%
CAGCACATCTTCAAAGCACA+TGG - chr1_1:53532235-53532254 None:intergenic 45.0%
!! GTGCTTTGAAGATGTGCTGT+TGG + chr1_1:53532236-53532255 Msa0028550:CDS 45.0%
! TTTGAAGATGTGCTGTTGGC+TGG + chr1_1:53532240-53532259 Msa0028550:CDS 45.0%
AGTCCCGGTCCAATGAAATA+TGG + chr1_1:53532391-53532410 Msa0028550:CDS 45.0%
GGATACTACGTCCATCAAAG+TGG + chr1_1:53532520-53532539 Msa0028550:CDS 45.0%
TACTACGTCCATCAAAGTGG+TGG + chr1_1:53532523-53532542 Msa0028550:CDS 45.0%
AACAACAGAAGAAGGGCAAG+AGG + chr1_1:53532557-53532576 Msa0028550:CDS 45.0%
AGGAAATGCGCAACCTTATC+TGG + chr1_1:53532577-53532596 Msa0028550:CDS 45.0%
GACATACCAGTTGCCAGATA+AGG - chr1_1:53532593-53532612 None:intergenic 45.0%
TTGTCGAATCCTTATTGGGG+GGG - chr1_1:53532720-53532739 None:intergenic 45.0%
GAGACCTCGTGTAATAGCTT+TGG + chr1_1:53532922-53532941 Msa0028550:intron 45.0%
GAAGCCAAAGCTATTACACG+AGG - chr1_1:53532929-53532948 None:intergenic 45.0%
GCCCCCATTCTTCTTAATTG+AGG + chr1_1:53533016-53533035 Msa0028550:intron 45.0%
TAAGACATGGGGGTAGTTTG+TGG + chr1_1:53533632-53533651 Msa0028550:intron 45.0%
! TTACGATGGCCCTTTTTCTG+CGG + chr1_1:53534002-53534021 Msa0028550:intron 45.0%
!! TGCTTTGAAGATCCAGAGTC+AGG + chr1_1:53534175-53534194 Msa0028550:CDS 45.0%
!! GCTTTGAAGATCCAGAGTCA+GGG + chr1_1:53534176-53534195 Msa0028550:CDS 45.0%
AACTCAAAATTTGGGGGTGG+GGG - chr1_1:53534581-53534600 None:intergenic 45.0%
AGTTGGAGAATGACTGATGG+CGG + chr1_1:53534602-53534621 Msa0028550:intron 45.0%
CAGTTCACAGGCATTCTTTG+AGG - chr1_1:53534742-53534761 None:intergenic 45.0%
! TTGAAGGGTATGCAGTTCAC+AGG - chr1_1:53534754-53534773 None:intergenic 45.0%
GTGAACTGCATACCCTTCAA+AGG + chr1_1:53534754-53534773 Msa0028550:intron 45.0%
GCATCTCTACCAGTCAAAGT+TGG + chr1_1:53534789-53534808 Msa0028550:intron 45.0%
CTTAGTTGGCCAACTTTGAC+TGG - chr1_1:53534801-53534820 None:intergenic 45.0%
GAGATTCCCTTCCATAGACA+GGG - chr1_1:53534908-53534927 None:intergenic 45.0%
AGAGATTCCCTTCCATAGAC+AGG - chr1_1:53534909-53534928 None:intergenic 45.0%
GCATTTAGCAAAGCTTCAGG+AGG - chr1_1:53535713-53535732 None:intergenic 45.0%
AGGTATGACATGTGGAGTGT+TGG + chr1_1:53535898-53535917 Msa0028550:intron 45.0%
! TCTTTTGGATCGGCATCTTG+AGG + chr1_1:53535987-53536006 Msa0028550:CDS 45.0%
! CTTTTGGATCGGCATCTTGA+GGG + chr1_1:53535988-53536007 Msa0028550:CDS 45.0%
!! TCTTGGCTTAGAAGGCATCT+CGG - chr1_1:53536214-53536233 None:intergenic 45.0%
GCAAGCAATCTTGGCTTAGA+AGG - chr1_1:53536222-53536241 None:intergenic 45.0%
! AAGCCAAGATTGCTTGCTGA+TGG + chr1_1:53536225-53536244 Msa0028550:intron 45.0%
CGACAGACTTAGATCGTTCA+TGG + chr1_1:53536368-53536387 Msa0028550:intron 45.0%
ATCTTAATCCCTGGGGTTTC+TGG + chr1_1:53536399-53536418 Msa0028550:CDS 45.0%
AGTAAGAAGCCTCTCAGATC+TGG + chr1_1:53536790-53536809 Msa0028550:intron 45.0%
! TGCATCCAGCCATCTTTTAG+GGG - chr1_1:53536828-53536847 None:intergenic 45.0%
CTTCAAGTCAATCTTCCCCA+AGG - chr1_1:53537166-53537185 None:intergenic 45.0%
CGCGAAACAAACCATCTCTA+TGG + chr1_1:53537304-53537323 Msa0028550:intron 45.0%
!! CCAGCCAACCCTATTTTAAG+AGG - chr1_1:53537494-53537513 None:intergenic 45.0%
! CCTCTTAAAATAGGGTTGGC+TGG + chr1_1:53537491-53537510 Msa0028550:intron 45.0%
GTTTAGTACAGCTGCACACA+GGG - chr1_1:53537790-53537809 None:intergenic 45.0%
TGTTTAGTACAGCTGCACAC+AGG - chr1_1:53537791-53537810 None:intergenic 45.0%
ATTATCTTCTTGGCGGAGGT+TGG - chr1_1:53538091-53538110 None:intergenic 45.0%
CACAATTATCTTCTTGGCGG+AGG - chr1_1:53538095-53538114 None:intergenic 45.0%
CGCCAAGAAGATAATTGTGC+AGG + chr1_1:53538096-53538115 Msa0028550:exon 45.0%
ATTGTGCAGGAGGAAACAAC+CGG + chr1_1:53538109-53538128 Msa0028550:exon 45.0%
GAATCCTCTACAGCTGCATA+TGG + chr1_1:53538179-53538198 Msa0028550:three_prime_UTR 45.0%
!! ATATGGTGCTGCAGCTGTAA+CGG + chr1_1:53538196-53538215 Msa0028550:three_prime_UTR 45.0%
AGTGTGATGCTTCAGTAGCA+GGG - chr1_1:53538271-53538290 None:intergenic 45.0%
AAAGCTCATCTGGTCCTGTT+AGG - chr1_1:53538535-53538554 None:intergenic 45.0%
CAAAGCATGCAAAGCTCATC+TGG - chr1_1:53538545-53538564 None:intergenic 45.0%
!!! ATTTAAAATTTATATTCAAA+AGG - chr1_1:53531010-53531029 None:intergenic 5.0%
ATACTGGCGCGGATACCATT+TGG + chr1_1:53524660-53524679 Msa0028550:five_prime_UTR 50.0%
TCCGATTGCGCCAAACCAAA+TGG - chr1_1:53524678-53524697 None:intergenic 50.0%
GTGAGTGAAGGGGATTGTTG+CGG - chr1_1:53524841-53524860 None:intergenic 50.0%
! ATGATTCGGCGTGAGTGAAG+GGG - chr1_1:53524851-53524870 None:intergenic 50.0%
! GATGATTCGGCGTGAGTGAA+GGG - chr1_1:53524852-53524871 None:intergenic 50.0%
AGCGCCACCGTGTTTGTAAA+CGG - chr1_1:53524886-53524905 None:intergenic 50.0%
TGTGATCGAAGAGGTTCCAG+CGG - chr1_1:53524938-53524957 None:intergenic 50.0%
!! TGGCAACGAGTAGTGGATTG+AGG - chr1_1:53524969-53524988 None:intergenic 50.0%
!! TCTTCGACCTTGGAGCATTG+CGG - chr1_1:53524994-53525013 None:intergenic 50.0%
GGAAGTTGTGGTTGGGATTG+TGG + chr1_1:53525380-53525399 Msa0028550:CDS 50.0%
AGTTGTGGTTGGGATTGTGG+CGG + chr1_1:53525383-53525402 Msa0028550:CDS 50.0%
CAGTCTCCTAAGGAGGCTAA+AGG + chr1_1:53526455-53526474 Msa0028550:CDS 50.0%
TATAGGCAGACAGAGCGTGA+TGG + chr1_1:53526697-53526716 Msa0028550:CDS 50.0%
CGGCAAAATTAGTGAGCCCT+TGG - chr1_1:53526768-53526787 None:intergenic 50.0%
GGATCATCATCCAGACAGAG+AGG + chr1_1:53526804-53526823 Msa0028550:CDS 50.0%
! GCAGCCTTATGTCATGTGCA+AGG + chr1_1:53527004-53527023 Msa0028550:intron 50.0%
GCCTTATGTCATGTGCAAGG+CGG + chr1_1:53527007-53527026 Msa0028550:intron 50.0%
ACCGCCTTGCACATGACATA+AGG - chr1_1:53527011-53527030 None:intergenic 50.0%
! CCAAAGCACTAATGCGTGTG+GGG + chr1_1:53527122-53527141 Msa0028550:intron 50.0%
CTGCACCAGAAGTGACTGAT+TGG + chr1_1:53527247-53527266 Msa0028550:CDS 50.0%
! TACTTGGTGGCTGCATCTGA+TGG + chr1_1:53527294-53527313 Msa0028550:CDS 50.0%
GTGAAGGAGCAGTAGGCATA+TGG - chr1_1:53527862-53527881 None:intergenic 50.0%
GGAGCATGGCAGTAGCAATT+GGG + chr1_1:53528097-53528116 Msa0028550:intron 50.0%
GAGCATGGCAGTAGCAATTG+GGG + chr1_1:53528098-53528117 Msa0028550:intron 50.0%
! TATGACTGGCTGACAGTCAC+GGG + chr1_1:53528146-53528165 Msa0028550:intron 50.0%
TCTTTGGCCCAGCTTCGTTA+AGG + chr1_1:53528329-53528348 Msa0028550:intron 50.0%
!! AAGGGCATCTGGTATAGGCT+GGG - chr1_1:53529466-53529485 None:intergenic 50.0%
!! GCTTGTTGATGAAGGGCATC+TGG - chr1_1:53529477-53529496 None:intergenic 50.0%
GATGCCCTTCATCAACAAGC+TGG + chr1_1:53529477-53529496 Msa0028550:CDS 50.0%
!! GTCATGAGTGGTGTTACGAG+GGG - chr1_1:53530657-53530676 None:intergenic 50.0%
GAACTCGATGGAGGCAAAGA+AGG - chr1_1:53531143-53531162 None:intergenic 50.0%
AGAATAAGGCAAGCTGCCAG+GGG - chr1_1:53531180-53531199 None:intergenic 50.0%
TCTGTTGTGCACTTTGGGTC+TGG + chr1_1:53531250-53531269 Msa0028550:intron 50.0%
GGGGGATATGTGCATAGACT+TGG + chr1_1:53531326-53531345 Msa0028550:intron 50.0%
GAACCGCTTGGTTAAGGAGA+GGG - chr1_1:53531598-53531617 None:intergenic 50.0%
ACACGGAAGGCCATTTATGG+GGG + chr1_1:53531783-53531802 Msa0028550:intron 50.0%
CTCCTTCTCTCCCCCATAAA+TGG - chr1_1:53531796-53531815 None:intergenic 50.0%
GGGTCTGCTGTGTACTTAAG+TGG + chr1_1:53532168-53532187 Msa0028550:CDS 50.0%
!! CTGTGTACTTAAGTGGGCTG+AGG + chr1_1:53532175-53532194 Msa0028550:CDS 50.0%
AACCAACGCCACCACTTTGA+TGG - chr1_1:53532534-53532553 None:intergenic 50.0%
TGTCGAATCCTTATTGGGGG+GGG - chr1_1:53532719-53532738 None:intergenic 50.0%
GTGTACCCACCCAATGAATG+TGG + chr1_1:53532821-53532840 Msa0028550:intron 50.0%
ACGACCGCAATATCACACAC+AGG + chr1_1:53533595-53533614 Msa0028550:CDS 50.0%
CGACCGCAATATCACACACA+GGG + chr1_1:53533596-53533615 Msa0028550:CDS 50.0%
AACTACCCCCATGTCTTACC+AGG - chr1_1:53533630-53533649 None:intergenic 50.0%
! GGGTAGTTTGTGGTGCCTAA+GGG + chr1_1:53533642-53533661 Msa0028550:intron 50.0%
TTCAAGCATCTCCCTGACTC+TGG - chr1_1:53534190-53534209 None:intergenic 50.0%
GTCCTACTGCCCAACTTAGT+TGG - chr1_1:53534815-53534834 None:intergenic 50.0%
AGACAGGGAAGTCCCTAGAT+GGG - chr1_1:53534893-53534912 None:intergenic 50.0%
TAGACAGGGAAGTCCCTAGA+TGG - chr1_1:53534894-53534913 None:intergenic 50.0%
TCTAGGGACTTCCCTGTCTA+TGG + chr1_1:53534894-53534913 Msa0028550:intron 50.0%
GGACTTCCCTGTCTATGGAA+GGG + chr1_1:53534899-53534918 Msa0028550:intron 50.0%
ATGTCACCATAACTGACGGC+CGG - chr1_1:53535066-53535085 None:intergenic 50.0%
ATGCTTCTACTGGGCCTTCT+AGG + chr1_1:53535567-53535586 Msa0028550:CDS 50.0%
CATCTTGAGGGCTGGAATGA+GGG + chr1_1:53536000-53536019 Msa0028550:CDS 50.0%
!! CTTGGCTTAGAAGGCATCTC+GGG - chr1_1:53536213-53536232 None:intergenic 50.0%
TCATGAACCAGAGACTGTCC+CGG - chr1_1:53536474-53536493 None:intergenic 50.0%
ATGGCTGGATGCATATCCCT+AGG + chr1_1:53536835-53536854 Msa0028550:intron 50.0%
! TGAGCTTTGACATGTTGGGC+TGG - chr1_1:53536892-53536911 None:intergenic 50.0%
CGGCCTATGAACCATTGGAA+TGG - chr1_1:53537215-53537234 None:intergenic 50.0%
TTCCAATGGTTCATAGGCCG+TGG + chr1_1:53537215-53537234 Msa0028550:intron 50.0%
TCCAATGGTTCATAGGCCGT+GGG + chr1_1:53537216-53537235 Msa0028550:intron 50.0%
! TCAGAGCATTTCCAGGATGC+AGG - chr1_1:53537437-53537456 None:intergenic 50.0%
TAGTGCGCCATCTGCTTATG+TGG + chr1_1:53537634-53537653 Msa0028550:CDS 50.0%
AGTGCGCCATCTGCTTATGT+GGG + chr1_1:53537635-53537654 Msa0028550:CDS 50.0%
TGCAATGCCTCGTCAACACT+TGG - chr1_1:53538056-53538075 None:intergenic 50.0%
CTTGGCGGAGGTTGGAAATA+GGG - chr1_1:53538083-53538102 None:intergenic 50.0%
TCTTGGCGGAGGTTGGAAAT+AGG - chr1_1:53538084-53538103 None:intergenic 50.0%
AGCACCATATGCAGCTGTAG+AGG - chr1_1:53538186-53538205 None:intergenic 50.0%
CAGTGTGATGCTTCAGTAGC+AGG - chr1_1:53538272-53538291 None:intergenic 50.0%
! GCTACTGAAGCATCACACTG+CGG + chr1_1:53538272-53538291 Msa0028550:three_prime_UTR 50.0%
AAGCATCACACTGCGGCTAT+AGG + chr1_1:53538279-53538298 Msa0028550:three_prime_UTR 50.0%
AGCATCACACTGCGGCTATA+GGG + chr1_1:53538280-53538299 Msa0028550:three_prime_UTR 50.0%
GGCGCGGATACCATTTGGTT+TGG + chr1_1:53524665-53524684 Msa0028550:five_prime_UTR 55.0%
TGAAGGGGATTGTTGCGGAG+AGG - chr1_1:53524836-53524855 None:intergenic 55.0%
! GGATGATTCGGCGTGAGTGA+AGG - chr1_1:53524853-53524872 None:intergenic 55.0%
TTACAAACACGGTGGCGCTC+CGG + chr1_1:53524887-53524906 Msa0028550:CDS 55.0%
TTTGGGGATTGGAACACCGC+CGG - chr1_1:53524909-53524928 None:intergenic 55.0%
TGATCGAAGAGGTTCCAGCG+GGG - chr1_1:53524936-53524955 None:intergenic 55.0%
GTGATCGAAGAGGTTCCAGC+GGG - chr1_1:53524937-53524956 None:intergenic 55.0%
! GGGATTGTGGCGGTTTTCGA+TGG + chr1_1:53525393-53525412 Msa0028550:CDS 55.0%
AGAACTCGTGTGGAAGCTGC+TGG + chr1_1:53526832-53526851 Msa0028550:CDS 55.0%
GCCTCGCGTAAATGGTCAGT+TGG + chr1_1:53526882-53526901 Msa0028550:CDS 55.0%
GCCAACTGACCATTTACGCG+AGG - chr1_1:53526886-53526905 None:intergenic 55.0%
CCCCACACGCATTAGTGCTT+TGG - chr1_1:53527125-53527144 None:intergenic 55.0%
GGCTGCCAATCAGTCACTTC+TGG - chr1_1:53527255-53527274 None:intergenic 55.0%
! GGCAGCAGTTGTTGTTCCTC+TGG + chr1_1:53527473-53527492 Msa0028550:CDS 55.0%
! GGGAGCATGGCAGTAGCAAT+TGG + chr1_1:53528096-53528115 Msa0028550:intron 55.0%
CACCTCTGATCGATTGCACC+TGG + chr1_1:53528700-53528719 Msa0028550:CDS 55.0%
CTCCAGGTGCAATCGATCAG+AGG - chr1_1:53528705-53528724 None:intergenic 55.0%
! AGGGCATCTGGTATAGGCTG+GGG - chr1_1:53529465-53529484 None:intergenic 55.0%
!! GAAGGGCATCTGGTATAGGC+TGG - chr1_1:53529467-53529486 None:intergenic 55.0%
GAAGGACCATCCTGACACTC+AGG - chr1_1:53530210-53530229 None:intergenic 55.0%
GTTGCGCATTGTGCGCTATG+TGG + chr1_1:53530510-53530529 Msa0028550:intron 55.0%
CTCGCAGATGCGGAGACAAT+GGG + chr1_1:53530557-53530576 Msa0028550:intron 55.0%
CCAGCCTTTGAACTCGATGG+AGG - chr1_1:53531152-53531171 None:intergenic 55.0%
CCTCCATCGAGTTCAAAGGC+TGG + chr1_1:53531149-53531168 Msa0028550:intron 55.0%
GAGCCAGCCTTTGAACTCGA+TGG - chr1_1:53531155-53531174 None:intergenic 55.0%
CTTGGTTAAGGAGAGGGCAG+GGG - chr1_1:53531592-53531611 None:intergenic 55.0%
GCTTGGTTAAGGAGAGGGCA+GGG - chr1_1:53531593-53531612 None:intergenic 55.0%
CTGCCCTCTCCTTAACCAAG+CGG + chr1_1:53531592-53531611 Msa0028550:intron 55.0%
GGAACCGCTTGGTTAAGGAG+AGG - chr1_1:53531599-53531618 None:intergenic 55.0%
GGCCATTTATGGGGGAGAGA+AGG + chr1_1:53531791-53531810 Msa0028550:intron 55.0%
! GTCCATCAAAGTGGTGGCGT+TGG + chr1_1:53532529-53532548 Msa0028550:CDS 55.0%
GCGCAACCTTATCTGGCAAC+TGG + chr1_1:53532584-53532603 Msa0028550:CDS 55.0%
TCGAATCCTTATTGGGGGGG+GGG - chr1_1:53532717-53532736 None:intergenic 55.0%
GTCGAATCCTTATTGGGGGG+GGG - chr1_1:53532718-53532737 None:intergenic 55.0%
TAAGAAGAATGGGGGCAGCG+AGG - chr1_1:53533012-53533031 None:intergenic 55.0%
GCCTTAGCGTTCCAAGCATC+AGG + chr1_1:53533094-53533113 Msa0028550:intron 55.0%
GCCTGATGCTTGGAACGCTA+AGG - chr1_1:53533098-53533117 None:intergenic 55.0%
GTTCCAAGCATCAGGCCCAA+AGG + chr1_1:53533102-53533121 Msa0028550:intron 55.0%
GATCCTTTGGGCCTGATGCT+TGG - chr1_1:53533108-53533127 None:intergenic 55.0%
! GGGGTAGTTTGTGGTGCCTA+AGG + chr1_1:53533641-53533660 Msa0028550:intron 55.0%
! GGCCAACTAAGTTGGGCAGT+AGG + chr1_1:53534810-53534829 Msa0028550:intron 55.0%
GGGACTTCCCTGTCTATGGA+AGG + chr1_1:53534898-53534917 Msa0028550:intron 55.0%
TATCAGTGGATCCGGGCATC+CGG + chr1_1:53535044-53535063 Msa0028550:intron 55.0%
GCATCTTGAGGGCTGGAATG+AGG + chr1_1:53535999-53536018 Msa0028550:CDS 55.0%
! GAATGAGGGTGTGAAGGAGC+TGG + chr1_1:53536014-53536033 Msa0028550:CDS 55.0%
AGTAGCTGCCAGAAACCCCA+GGG - chr1_1:53536410-53536429 None:intergenic 55.0%
AGAGACTGTCCCGGCTAAGA+AGG - chr1_1:53536465-53536484 None:intergenic 55.0%
TTCTTAGCCGGGACAGTCTC+TGG + chr1_1:53536464-53536483 Msa0028550:intron 55.0%
!! ACATGTTGGGCTGGCCACAA+CGG - chr1_1:53536883-53536902 None:intergenic 55.0%
CCAATGGTTCATAGGCCGTG+GGG + chr1_1:53537217-53537236 Msa0028550:intron 55.0%
ACGCAAGGTTACTGACCCCA+CGG - chr1_1:53537235-53537254 None:intergenic 55.0%
TTGGAGTTTCGCCTGCATCC+TGG + chr1_1:53537423-53537442 Msa0028550:CDS 55.0%
CCATCTGCTTATGTGGGACC+CGG + chr1_1:53537641-53537660 Msa0028550:CDS 55.0%
AGGGGATTGTTGCGGAGAGG+AGG - chr1_1:53524833-53524852 None:intergenic 60.0%
!!! AGCGGGGGCATTTTGGGGAT+TGG - chr1_1:53524920-53524939 None:intergenic 60.0%
AATCCCCAAAATGCCCCCGC+TGG + chr1_1:53524919-53524938 Msa0028550:CDS 60.0%
!!! GTTCCAGCGGGGGCATTTTG+GGG - chr1_1:53524925-53524944 None:intergenic 60.0%
!!! GGTTCCAGCGGGGGCATTTT+GGG - chr1_1:53524926-53524945 None:intergenic 60.0%
!!! AGGTTCCAGCGGGGGCATTT+TGG - chr1_1:53524927-53524946 None:intergenic 60.0%
GATCGAAGAGGTTCCAGCGG+GGG - chr1_1:53524935-53524954 None:intergenic 60.0%
TGCGGAGTGGCAACGAGTAG+TGG - chr1_1:53524976-53524995 None:intergenic 60.0%
TGCCACTCCGCAATGCTCCA+AGG + chr1_1:53524984-53525003 Msa0028550:CDS 60.0%
!! GACCTTGGAGCATTGCGGAG+TGG - chr1_1:53524989-53525008 None:intergenic 60.0%
CGGTGCGGAAGCTAGTGAGA+TGG + chr1_1:53525422-53525441 Msa0028550:CDS 60.0%
ACTCGTGTGGAAGCTGCTGG+TGG + chr1_1:53526835-53526854 Msa0028550:CDS 60.0%
GGCGGTTTGCCTCGCGTAAA+TGG + chr1_1:53526874-53526893 Msa0028550:CDS 60.0%
! CTGGCAGATTAGGGTGCTCC+AGG - chr1_1:53528721-53528740 None:intergenic 60.0%
TCTGCGAGCAGCTCCCTCTT+GGG - chr1_1:53530545-53530564 None:intergenic 60.0%
ATCTGCGAGCAGCTCCCTCT+TGG - chr1_1:53530546-53530565 None:intergenic 60.0%
GCTCGCAGATGCGGAGACAA+TGG + chr1_1:53530556-53530575 Msa0028550:intron 60.0%
GCAGATGCGGAGACAATGGG+CGG + chr1_1:53530560-53530579 Msa0028550:intron 60.0%
CGCTTGGTTAAGGAGAGGGC+AGG - chr1_1:53531594-53531613 None:intergenic 60.0%
AATCCTTATTGGGGGGGGGG+GGG - chr1_1:53532714-53532733 None:intergenic 60.0%
GAATCCTTATTGGGGGGGGG+GGG - chr1_1:53532715-53532734 None:intergenic 60.0%
CGAATCCTTATTGGGGGGGG+GGG - chr1_1:53532716-53532735 None:intergenic 60.0%
TTTGGGGGTGGGGGAAGAGA+AGG - chr1_1:53534572-53534591 None:intergenic 60.0%
ATAACTGACGGCCGGATGCC+CGG - chr1_1:53535058-53535077 None:intergenic 60.0%
TGGATCGGCATCTTGAGGGC+TGG + chr1_1:53535992-53536011 Msa0028550:CDS 60.0%
! GGGCTGGAATGAGGGTGTGA+AGG + chr1_1:53536008-53536027 Msa0028550:CDS 60.0%
GAGTAGCTGCCAGAAACCCC+AGG - chr1_1:53536411-53536430 None:intergenic 60.0%
CCCCACGGCCTATGAACCAT+TGG - chr1_1:53537220-53537239 None:intergenic 60.0%
CCGGGTCCCACATAAGCAGA+TGG - chr1_1:53537644-53537663 None:intergenic 60.0%
!! GGATCGGCCAAGTGTTGACG+AGG + chr1_1:53538046-53538065 Msa0028550:CDS 60.0%
GAGGGAGCTGCTCGCAGATG+CGG + chr1_1:53530547-53530566 Msa0028550:intron 65.0%
TGGGGGTGACCATGGCACCA+GGG - chr1_1:53530588-53530607 None:intergenic 65.0%
TTGGGGGTGACCATGGCACC+AGG - chr1_1:53530589-53530608 None:intergenic 65.0%
!! TCAAAGGCTGGCTCTGCCCC+TGG + chr1_1:53531161-53531180 Msa0028550:intron 65.0%
ATCCTTATTGGGGGGGGGGG+GGG - chr1_1:53532713-53532732 None:intergenic 65.0%
GGGCATCCGGCCGTCAGTTA+TGG + chr1_1:53535057-53535076 Msa0028550:intron 65.0%
CAAACACGGTGGCGCTCCGG+CGG + chr1_1:53524890-53524909 Msa0028550:CDS 70.0%
GGGGTGACCATGGCACCAGG+GGG - chr1_1:53530586-53530605 None:intergenic 70.0%
GGGGGTGACCATGGCACCAG+GGG - chr1_1:53530587-53530606 None:intergenic 70.0%
TCCTTATTGGGGGGGGGGGG+GGG - chr1_1:53532712-53532731 None:intergenic 70.0%
GGAGACAATGGGCGGCCCCC+TGG + chr1_1:53530568-53530587 Msa0028550:intron 75.0%
TTATTGGGGGGGGGGGGGGG+GGG - chr1_1:53532709-53532728 None:intergenic 75.0%
CTTATTGGGGGGGGGGGGGG+GGG - chr1_1:53532710-53532729 None:intergenic 75.0%
CCTTATTGGGGGGGGGGGGG+GGG - chr1_1:53532711-53532730 None:intergenic 75.0%
!! TGGGCGGCCCCCTGGTGCCA+TGG + chr1_1:53530576-53530595 Msa0028550:intron 80.0%
! TATTGGGGGGGGGGGGGGGG+GGG - chr1_1:53532708-53532727 None:intergenic 80.0%
! CCCCCCCCCCCCCCCCAATA+AGG + chr1_1:53532708-53532727 Msa0028550:intron 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532707-53532726 None:intergenic 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532706-53532725 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr1_1:53532705-53532724 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 53524642 53538698 53524642 ID=Msa0028550;Name=Msa0028550
chr1_1 mRNA 53524642 53538698 53524642 ID=Msa0028550-mRNA-1;Parent=Msa0028550;Name=Msa0028550-mRNA-1;_AED=0.17;_eAED=0.17;_QI=150|1|1|1|1|1|20|589|1070
chr1_1 exon 53524642 53525068 53524642 ID=Msa0028550-mRNA-1:exon:15738;Parent=Msa0028550-mRNA-1
chr1_1 exon 53525364 53525628 53525364 ID=Msa0028550-mRNA-1:exon:15739;Parent=Msa0028550-mRNA-1
chr1_1 exon 53526135 53526240 53526135 ID=Msa0028550-mRNA-1:exon:15740;Parent=Msa0028550-mRNA-1
chr1_1 exon 53526335 53526476 53526335 ID=Msa0028550-mRNA-1:exon:15741;Parent=Msa0028550-mRNA-1
chr1_1 exon 53526680 53526941 53526680 ID=Msa0028550-mRNA-1:exon:15742;Parent=Msa0028550-mRNA-1
chr1_1 exon 53527233 53527600 53527233 ID=Msa0028550-mRNA-1:exon:15743;Parent=Msa0028550-mRNA-1
chr1_1 exon 53528690 53528763 53528690 ID=Msa0028550-mRNA-1:exon:15744;Parent=Msa0028550-mRNA-1
chr1_1 exon 53529345 53529498 53529345 ID=Msa0028550-mRNA-1:exon:15745;Parent=Msa0028550-mRNA-1
chr1_1 exon 53529628 53529820 53529628 ID=Msa0028550-mRNA-1:exon:15746;Parent=Msa0028550-mRNA-1
chr1_1 exon 53530071 53530263 53530071 ID=Msa0028550-mRNA-1:exon:15747;Parent=Msa0028550-mRNA-1
chr1_1 exon 53532159 53532605 53532159 ID=Msa0028550-mRNA-1:exon:15748;Parent=Msa0028550-mRNA-1
chr1_1 exon 53533573 53533630 53533573 ID=Msa0028550-mRNA-1:exon:15749;Parent=Msa0028550-mRNA-1
chr1_1 exon 53534161 53534248 53534161 ID=Msa0028550-mRNA-1:exon:15750;Parent=Msa0028550-mRNA-1
chr1_1 exon 53535514 53535588 53535514 ID=Msa0028550-mRNA-1:exon:15751;Parent=Msa0028550-mRNA-1
chr1_1 exon 53535685 53535768 53535685 ID=Msa0028550-mRNA-1:exon:15752;Parent=Msa0028550-mRNA-1
chr1_1 exon 53535900 53536043 53535900 ID=Msa0028550-mRNA-1:exon:15753;Parent=Msa0028550-mRNA-1
chr1_1 exon 53536374 53536452 53536374 ID=Msa0028550-mRNA-1:exon:15754;Parent=Msa0028550-mRNA-1
chr1_1 exon 53537422 53537504 53537422 ID=Msa0028550-mRNA-1:exon:15755;Parent=Msa0028550-mRNA-1
chr1_1 exon 53537608 53537662 53537608 ID=Msa0028550-mRNA-1:exon:15756;Parent=Msa0028550-mRNA-1
chr1_1 exon 53538044 53538698 53538044 ID=Msa0028550-mRNA-1:exon:15757;Parent=Msa0028550-mRNA-1
chr1_1 five_prime_UTR 53524642 53524791 53524642 ID=Msa0028550-mRNA-1:five_prime_utr;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53524792 53525068 53524792 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53525364 53525628 53525364 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53526135 53526240 53526135 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53526335 53526476 53526335 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53526680 53526941 53526680 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53527233 53527600 53527233 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53528690 53528763 53528690 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53529345 53529498 53529345 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53529628 53529820 53529628 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53530071 53530263 53530071 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53532159 53532605 53532159 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53533573 53533630 53533573 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53534161 53534248 53534161 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53535514 53535588 53535514 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53535685 53535768 53535685 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53535900 53536043 53535900 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53536374 53536452 53536374 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53537422 53537504 53537422 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53537608 53537662 53537608 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 CDS 53538044 53538109 53538044 ID=Msa0028550-mRNA-1:cds;Parent=Msa0028550-mRNA-1
chr1_1 three_prime_UTR 53538110 53538698 53538110 ID=Msa0028550-mRNA-1:three_prime_utr;Parent=Msa0028550-mRNA-1
Gene Sequence

>Msa0028550

ATGATTAGAAAGCACTTCTTCATCGCGTTAGGGTTTCTCCTCCTCTCCGCAACAATCCCCTTCACTCACGCCGAATCATCCACATGCTTAACCGTTTACAAACACGGTGGCGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAACCTCTTCGATCACAATTCTCGTCCTCAATCCACTACTCGTTGCCACTCCGCAATGCTCCAAGGTCGAAGAAAATCTCAAGAGGATCGCACTCTCTGCGTCCTCGATCTTCGCATTCCATTTCCCGGTGCAATGGGGATTAAGGAAGTTGTGGTTGGGATTGTGGCGGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCAAAATTATTGATGGAGTATTTTGTTCTTCATACTTATTTTCTTCTTGATGCTACGTATTCTGTTATATCGAAAGCTTCGACAGGAACATTGCTTCATGGGAAAGGTCATGATCATGTAAACGTATTGCATAGACGGAAAGAGATGTTAGGTTGGCAATTGAATGAACTGCATTCTGAAAGGTTGCAGAATACATTTTCTGCTAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAAGAAGCATTGTTGAGAGCAATTCATGATATTGATGAAAAGTTTTCTGAGGAAGCCTCTAGGAATAACCTTCATTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGCCTCTTTATTAAAGCTATATAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCTTCCCAAGGGCTCACTAATTTTGCCGTAAAGGAATTGACTAGGGATCATCATCCAGACAGAGAGGATGAAAGAACTCGTGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGCGGTTTGCCTCGCGTAAATGGTCAGTTGGCTATAACACGGGCTATTGGCGACGTGTTCTTTAAAAGTTATGGAGTTGTATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAACGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTATGTGACATGAGATCAGATTGCACCTCTTCATCTTCTTATTCATTAGCAGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTTTCAAATCTTCTGCTAACTCGCTTAGAAGAAGCTACACTGAAAACGAGGATGCAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCAGCCAATGGTATCACCTCTGATCGATTGCACCTGGAGCACCCTAATCTGCCAGATACCAAGTTTAAGCGAATAATGGTTGAAGTGAAACATGGTGATTTTGGGTGTTTTTATTTATCAGAAAATCTTGGTGATTTGGTGGATTCTAAGTGGCTTGCCAAAAAAGATGACTGGGAAGACTATTTGTATGAACTACCCCAGCCTATACCAGATGCCCTTCATCAACAAGCTGTAGTAGATGGCCCTGTAATTTTGTACAACGACCAAAACTTCTGTTTTCACCTGAGTTCAACTATCAATGAAGCCAATGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCAGATAACAGGTCTTCTGATTATTCAATGCCTGATTCAAGGTATGTATTAAAGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAACCAAGGTAATATTACTGCAAAAATGAGCAAGGGTGACAATAATAGAAACAGCAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAACATTTTGGAGAAATTTTCTTAAATGCCTCCATGTGCTTTGAAGATGTGCTGTTGGCTGGAAAATCTAACTGCGTATACGAAACATCACAATATGATTCTGAGTATTCGTTTCAAAACAAATTTCGACTGCAAGGAGCCATATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCCCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAACTTTTATATACTGTAGAAGATGCAAACAATACTGCCGAGAACGAAAGACTTGAGCAAGTGAAACAGGTTCGGATACTACGTCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAACTGTTATTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGGGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGATGCTCCAACAAAAGTGAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGACGAGTTCACAATAAAGCATTTATATGCTTCTACTGGGCCTTCTAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCATCAAGCTCAACTTTGAAGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCAAATATTTTCCAGATAAATGCTTTAACACGTGCTCTTTTGGATCGGCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGCTACTCAAAAAAGTATCACAAAGTGAAAGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGAATTCTTTTCTAGACAAATTAAGGCTAGAGATCCTCTTAAAATAGGTTTTTCAGACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTTATGTGGGACCCGGAGGATCGGCCAAGTGTTGACGAGGCATTGCAGCATCCCTATTTCCAACCTCCGCCAAGAAGATAA
Protein sequence

>Msa0028550

MIRKHFFIALGFLLLSATIPFTHAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQSTTRCHSAMLQGRRKSQEDRTLCVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDATYSVISKASTGTLLHGKGHDHVNVLHRRKEMLGWQLNELHSERLQNTFSANFDDSFHLEILKEALLRAIHDIDEKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSENFQSPKEAKASLLKLYRQTERDGSVSVWDREKYRLASSQGLTNFAVKELTRDHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVVSAPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHRLCDMRSDCTSSSSYSLADFIINTALKKGSMDNMAAVVVPLESFKSSANSLRRSYTENEDAGFPLFGLQESAYRSSANGITSDRLHLEHPNLPDTKFKRIMVEVKHGDFGCFYLSENLGDLVDSKWLAKKDDWEDYLYELPQPIPDALHQQAVVDGPVILYNDQNFCFHLSSTINEANDQCINPEGFASFIGLLESIPLHDTGSDNRSSDYSMPDSRYVLKRSFGRGSYGEVWLAFHWNCNQGNITAKMSKGDNNRNSSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKHFGEIFLNASMCFEDVLLAGKSNCVYETSQYDSEYSFQNKFRLQGAIYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAENERLEQVKQVRILRPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDAPTKVNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGPSSSTLKYDMWSVGVVMLEMVLGTPNIFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGVSGSYSKKYHKVKVGVSPASWKCSEEFFSRQIKARDPLKIGFSDIWALRLVRHLLMWDPEDRPSVDEALQHPYFQPPPRR*