Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348470 | GAU49970.1 | 82.812 | 128 | 19 | 1 | 1 | 125 | 1 | 128 | 1.05e-69 | 217 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348470 | A0A2Z6PGB9 | 82.812 | 128 | 19 | 1 | 1 | 125 | 1 | 128 | 5.00e-70 | 217 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005270 | Msa1348470 | -0.821144 | 4.720486e-53 | -8.615850e-47 |
Msa0029850 | Msa1348470 | -0.831077 | 2.048212e-55 | -8.615850e-47 |
Msa0031180 | Msa1348470 | -0.811787 | 5.879367e-51 | -8.615850e-47 |
Msa0036140 | Msa1348470 | -0.838038 | 3.646569e-57 | -8.615850e-47 |
Msa0040620 | Msa1348470 | -0.823220 | 1.557132e-53 | -8.615850e-47 |
Msa0042550 | Msa1348470 | -0.822272 | 2.588745e-53 | -8.615850e-47 |
Msa0043980 | Msa1348470 | -0.802178 | 6.344978e-49 | -8.615850e-47 |
Msa0053760 | Msa1348470 | -0.808202 | 3.476940e-50 | -8.615850e-47 |
Msa0054820 | Msa1348470 | -0.811253 | 7.680125e-51 | -8.615850e-47 |
Msa0056450 | Msa1348470 | -0.811741 | 6.014468e-51 | -8.615850e-47 |
Msa0059890 | Msa1348470 | -0.811764 | 5.947653e-51 | -8.615850e-47 |
Msa0065680 | Msa1348470 | 0.800188 | 1.620070e-48 | -8.615850e-47 |
Msa0077180 | Msa1348470 | -0.823060 | 1.697108e-53 | -8.615850e-47 |
Msa0078480 | Msa1348470 | -0.806940 | 6.443000e-50 | -8.615850e-47 |
Msa0083090 | Msa1348470 | -0.816240 | 6.123150e-52 | -8.615850e-47 |
Msa0084080 | Msa1348470 | -0.845628 | 3.606260e-59 | -8.615850e-47 |
Msa0085370 | Msa1348470 | -0.815968 | 7.042806e-52 | -8.615850e-47 |
Msa0086420 | Msa1348470 | -0.807253 | 5.533096e-50 | -8.615850e-47 |
Msa0092440 | Msa1348470 | -0.800331 | 1.515553e-48 | -8.615850e-47 |
Msa0095560 | Msa1348470 | -0.812438 | 4.239740e-51 | -8.615850e-47 |
Msa0096580 | Msa1348470 | -0.817704 | 2.872839e-52 | -8.615850e-47 |
Msa0099650 | Msa1348470 | -0.800664 | 1.295859e-48 | -8.615850e-47 |
Msa0100160 | Msa1348470 | -0.817512 | 3.173007e-52 | -8.615850e-47 |
Msa0104800 | Msa1348470 | -0.812040 | 5.177472e-51 | -8.615850e-47 |
Msa1348470 | Msa1357080 | -0.806840 | 6.766061e-50 | -8.615850e-47 |
Msa1348470 | Msa1357890 | -0.823468 | 1.362584e-53 | -8.615850e-47 |
Msa1348470 | Msa1359560 | -0.810813 | 9.563208e-51 | -8.615850e-47 |
Msa1348470 | Msa1364210 | -0.800797 | 1.217793e-48 | -8.615850e-47 |
Msa1348470 | Msa1371940 | -0.815257 | 1.014452e-51 | -8.615850e-47 |
Msa1348470 | Msa1372150 | -0.826758 | 2.276051e-54 | -8.615850e-47 |
Msa1348470 | Msa1372290 | -0.823357 | 1.446512e-53 | -8.615850e-47 |
Msa1348470 | Msa1374470 | -0.807756 | 4.325815e-50 | -8.615850e-47 |
Msa1348470 | Msa1374710 | -0.809959 | 1.461863e-50 | -8.615850e-47 |
Msa1348470 | Msa1376130 | -0.837659 | 4.563342e-57 | -8.615850e-47 |
Msa1348470 | Msa1377570 | -0.836400 | 9.566511e-57 | -8.615850e-47 |
Msa1348470 | Msa1378410 | -0.801988 | 6.942839e-49 | -8.615850e-47 |
Msa1348470 | Msa1385000 | -0.802061 | 6.706886e-49 | -8.615850e-47 |
Msa1348470 | Msa1392700 | -0.814222 | 1.719444e-51 | -8.615850e-47 |
Msa1348470 | Msa1395600 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
Msa1348470 | Msa1397120 | -0.820058 | 8.381098e-53 | -8.615850e-47 |
Msa1348470 | Msa1398090 | -0.815462 | 9.130398e-52 | -8.615850e-47 |
Msa1348470 | Msa1401460 | -0.801539 | 8.586700e-49 | -8.615850e-47 |
Msa1348470 | Msa1403340 | -0.835169 | 1.962608e-56 | -8.615850e-47 |
Msa1348470 | Msa1403890 | -0.814226 | 1.716130e-51 | -8.615850e-47 |
Msa1348470 | Msa1404240 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
Msa1348470 | Msa1406110 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
Msa1348470 | Msa1407580 | -0.821618 | 3.668775e-53 | -8.615850e-47 |
Msa1348470 | Msa1408620 | 0.804580 | 2.017652e-49 | -8.615850e-47 |
Msa1348470 | Msa1410210 | -0.811173 | 7.990393e-51 | -8.615850e-47 |
Msa1348470 | Msa1423820 | -0.809222 | 2.105336e-50 | -8.615850e-47 |
Msa1348470 | Msa1426570 | -0.810590 | 1.068583e-50 | -8.615850e-47 |
Msa1348470 | Msa1435400 | -0.810031 | 1.410744e-50 | -8.615850e-47 |
Msa1348470 | Msa1440940 | -0.830958 | 2.189956e-55 | -8.615850e-47 |
Msa1348470 | Msa1442790 | -0.810914 | 9.094842e-51 | -8.615850e-47 |
Msa1348470 | Msa1444250 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
Msa1348470 | Msa1444260 | -0.815758 | 7.846239e-52 | -8.615850e-47 |
Msa1348470 | Msa1449520 | -0.804929 | 1.706062e-49 | -8.615850e-47 |
Msa1348470 | Msa1462930 | -0.803878 | 2.824696e-49 | -8.615850e-47 |
Msa0609410 | Msa1348470 | 0.805025 | 1.629224e-49 | -8.615850e-47 |
Msa0610670 | Msa1348470 | -0.804727 | 1.879720e-49 | -8.615850e-47 |
Msa0613710 | Msa1348470 | -0.805348 | 1.393862e-49 | -8.615850e-47 |
Msa0618950 | Msa1348470 | -0.809551 | 1.789171e-50 | -8.615850e-47 |
Msa0624060 | Msa1348470 | -0.802853 | 4.605411e-49 | -8.615850e-47 |
Msa0626220 | Msa1348470 | -0.806498 | 7.988379e-50 | -8.615850e-47 |
Msa0626990 | Msa1348470 | -0.807104 | 5.950115e-50 | -8.615850e-47 |
Msa0628740 | Msa1348470 | -0.811306 | 7.477609e-51 | -8.615850e-47 |
Msa0629430 | Msa1348470 | -0.820060 | 8.372517e-53 | -8.615850e-47 |
Msa0631200 | Msa1348470 | -0.800842 | 1.191949e-48 | -8.615850e-47 |
Msa0636020 | Msa1348470 | -0.811818 | 5.787316e-51 | -8.615850e-47 |
Msa0637900 | Msa1348470 | -0.809088 | 2.249346e-50 | -8.615850e-47 |
Msa0651270 | Msa1348470 | -0.842561 | 2.398099e-58 | -8.615850e-47 |
Msa0653320 | Msa1348470 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
Msa0661320 | Msa1348470 | -0.807443 | 5.042552e-50 | -8.615850e-47 |
Msa0666140 | Msa1348470 | -0.804643 | 1.957296e-49 | -8.615850e-47 |
Msa0667050 | Msa1348470 | -0.829488 | 5.004388e-55 | -8.615850e-47 |
Msa0667790 | Msa1348470 | -0.801394 | 9.194007e-49 | -8.615850e-47 |
Msa0673460 | Msa1348470 | -0.800555 | 1.363903e-48 | -8.615850e-47 |
Msa0677080 | Msa1348470 | -0.806381 | 8.455961e-50 | -8.615850e-47 |
Msa0679550 | Msa1348470 | -0.810391 | 1.179878e-50 | -8.615850e-47 |
Msa0682090 | Msa1348470 | -0.809419 | 1.910039e-50 | -8.615850e-47 |
Msa0682140 | Msa1348470 | -0.804929 | 1.706062e-49 | -8.615850e-47 |
Msa0688070 | Msa1348470 | -0.831073 | 2.052592e-55 | -8.615850e-47 |
Msa0693100 | Msa1348470 | -0.800008 | 1.762593e-48 | -8.615850e-47 |
Msa0693310 | Msa1348470 | -0.814462 | 1.522210e-51 | -8.615850e-47 |
Msa0693380 | Msa1348470 | -0.803398 | 3.553304e-49 | -8.615850e-47 |
Msa0698360 | Msa1348470 | -0.801350 | 9.386008e-49 | -8.615850e-47 |
Msa0704920 | Msa1348470 | -0.800059 | 1.721523e-48 | -8.615850e-47 |
Msa0705190 | Msa1348470 | -0.812820 | 3.496944e-51 | -8.615850e-47 |
Msa0709160 | Msa1348470 | -0.806318 | 8.720722e-50 | -8.615850e-47 |
Msa0711100 | Msa1348470 | -0.820026 | 8.523624e-53 | -8.615850e-47 |
Msa0711790 | Msa1348470 | -0.811064 | 8.437893e-51 | -8.615850e-47 |
Msa0715410 | Msa1348470 | -0.813493 | 2.489057e-51 | -8.615850e-47 |
Msa0716960 | Msa1348470 | -0.836791 | 7.607836e-57 | -8.615850e-47 |
Msa0717010 | Msa1348470 | -0.839865 | 1.227059e-57 | -8.615850e-47 |
Msa0717020 | Msa1348470 | -0.811712 | 6.104196e-51 | -8.615850e-47 |
Msa0721280 | Msa1348470 | -0.821546 | 3.812714e-53 | -8.615850e-47 |
Msa0721970 | Msa1348470 | -0.805145 | 1.537826e-49 | -8.615850e-47 |
Msa0731180 | Msa1348470 | -0.810419 | 1.163596e-50 | -8.615850e-47 |
Msa0740510 | Msa1348470 | -0.818488 | 1.909900e-52 | -8.615850e-47 |
Msa0744170 | Msa1348470 | 0.808256 | 3.385762e-50 | -8.615850e-47 |
Msa0749440 | Msa1348470 | -0.814636 | 1.393035e-51 | -8.615850e-47 |
Msa0751850 | Msa1348470 | -0.816136 | 6.461578e-52 | -8.615850e-47 |
Msa0761890 | Msa1348470 | -0.804117 | 2.519831e-49 | -8.615850e-47 |
Msa0763890 | Msa1348470 | -0.808034 | 3.776921e-50 | -8.615850e-47 |
Msa0763920 | Msa1348470 | -0.811665 | 6.250426e-51 | -8.615850e-47 |
Msa0773590 | Msa1348470 | -0.819339 | 1.223447e-52 | -8.615850e-47 |
Msa0788070 | Msa1348470 | 0.809099 | 2.236806e-50 | -8.615850e-47 |
Msa0788710 | Msa1348470 | -0.806458 | 8.146364e-50 | -8.615850e-47 |
Msa0793140 | Msa1348470 | 0.866249 | 3.272237e-65 | -8.615850e-47 |
Msa0794680 | Msa1348470 | -0.800705 | 1.271400e-48 | -8.615850e-47 |
Msa0803590 | Msa1348470 | -0.814291 | 1.660550e-51 | -8.615850e-47 |
Msa0817460 | Msa1348470 | -0.816518 | 5.307288e-52 | -8.615850e-47 |
Msa0818890 | Msa1348470 | -0.815863 | 7.434003e-52 | -8.615850e-47 |
Msa0820770 | Msa1348470 | -0.815043 | 1.131444e-51 | -8.615850e-47 |
Msa0830420 | Msa1348470 | -0.801348 | 9.392278e-49 | -8.615850e-47 |
Msa0831150 | Msa1348470 | -0.831823 | 1.341295e-55 | -8.615850e-47 |
Msa0831850 | Msa1348470 | -0.815184 | 1.053081e-51 | -8.615850e-47 |
Msa0832090 | Msa1348470 | -0.811586 | 6.502447e-51 | -8.615850e-47 |
Msa0832150 | Msa1348470 | -0.820431 | 6.883488e-53 | -8.615850e-47 |
Msa0124550 | Msa1348470 | -0.837515 | 4.967136e-57 | -8.615850e-47 |
Msa0125050 | Msa1348470 | -0.814213 | 1.727065e-51 | -8.615850e-47 |
Msa0138020 | Msa1348470 | -0.815585 | 8.572443e-52 | -8.615850e-47 |
Msa0138500 | Msa1348470 | -0.817883 | 2.617501e-52 | -8.615850e-47 |
Msa0138520 | Msa1348470 | -0.819371 | 1.202676e-52 | -8.615850e-47 |
Msa0144790 | Msa1348470 | -0.812139 | 4.926049e-51 | -8.615850e-47 |
Msa0151180 | Msa1348470 | -0.806416 | 8.313384e-50 | -8.615850e-47 |
Msa0159770 | Msa1348470 | -0.814129 | 1.802550e-51 | -8.615850e-47 |
Msa0169820 | Msa1348470 | -0.820808 | 5.639232e-53 | -8.615850e-47 |
Msa0171120 | Msa1348470 | -0.824560 | 7.554460e-54 | -8.615850e-47 |
Msa0175540 | Msa1348470 | -0.818050 | 2.399833e-52 | -8.615850e-47 |
Msa0178510 | Msa1348470 | -0.817759 | 2.791306e-52 | -8.615850e-47 |
Msa0178860 | Msa1348470 | 0.819585 | 1.074922e-52 | -8.615850e-47 |
Msa0185510 | Msa1348470 | -0.812311 | 4.519828e-51 | -8.615850e-47 |
Msa0187950 | Msa1348470 | -0.805903 | 1.066381e-49 | -8.615850e-47 |
Msa0199800 | Msa1348470 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
Msa0200560 | Msa1348470 | -0.810348 | 1.205108e-50 | -8.615850e-47 |
Msa0205340 | Msa1348470 | -0.809055 | 2.285962e-50 | -8.615850e-47 |
Msa0206010 | Msa1348470 | -0.818806 | 1.617587e-52 | -8.615850e-47 |
Msa0212090 | Msa1348470 | -0.811761 | 5.954520e-51 | -8.615850e-47 |
Msa0213040 | Msa1348470 | -0.831329 | 1.775335e-55 | -8.615850e-47 |
Msa0217680 | Msa1348470 | -0.811100 | 8.287338e-51 | -8.615850e-47 |
Msa0219240 | Msa1348470 | -0.803983 | 2.686388e-49 | -8.615850e-47 |
Msa0220440 | Msa1348470 | -0.805407 | 1.355206e-49 | -8.615850e-47 |
Msa0225640 | Msa1348470 | -0.800206 | 1.606743e-48 | -8.615850e-47 |
Msa0236420 | Msa1348470 | -0.800931 | 1.143021e-48 | -8.615850e-47 |
Msa1224580 | Msa1348470 | 0.812124 | 4.963578e-51 | -8.615850e-47 |
Msa1227330 | Msa1348470 | -0.807667 | 4.519244e-50 | -8.615850e-47 |
Msa1235400 | Msa1348470 | -0.802996 | 4.303892e-49 | -8.615850e-47 |
Msa1236890 | Msa1348470 | -0.810104 | 1.360369e-50 | -8.615850e-47 |
Msa1242580 | Msa1348470 | 0.807851 | 4.130370e-50 | -8.615850e-47 |
Msa1251080 | Msa1348470 | -0.801813 | 7.541919e-49 | -8.615850e-47 |
Msa1258380 | Msa1348470 | 0.800318 | 1.524527e-48 | -8.615850e-47 |
Msa1263290 | Msa1348470 | 0.843082 | 1.743864e-58 | -8.615850e-47 |
Msa1267520 | Msa1348470 | -0.802785 | 4.756778e-49 | -8.615850e-47 |
Msa1270660 | Msa1348470 | -0.840078 | 1.079929e-57 | -8.615850e-47 |
Msa1270730 | Msa1348470 | -0.843135 | 1.687381e-58 | -8.615850e-47 |
Msa1276440 | Msa1348470 | -0.807934 | 3.966570e-50 | -8.615850e-47 |
Msa1287440 | Msa1348470 | -0.812831 | 3.478417e-51 | -8.615850e-47 |
Msa1295540 | Msa1348470 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
Msa1295930 | Msa1348470 | -0.815510 | 8.911037e-52 | -8.615850e-47 |
Msa1297290 | Msa1348470 | -0.801727 | 7.853771e-49 | -8.615850e-47 |
Msa1305190 | Msa1348470 | -0.803634 | 3.174215e-49 | -8.615850e-47 |
Msa1306840 | Msa1348470 | -0.820757 | 5.793194e-53 | -8.615850e-47 |
Msa1314770 | Msa1348470 | -0.823019 | 1.735408e-53 | -8.615850e-47 |
Msa1320820 | Msa1348470 | -0.823303 | 1.489273e-53 | -8.615850e-47 |
Msa1331000 | Msa1348470 | -0.809500 | 1.835440e-50 | -8.615850e-47 |
Msa1331320 | Msa1348470 | -0.830587 | 2.700783e-55 | -8.615850e-47 |
Msa1333680 | Msa1348470 | -0.838507 | 2.759552e-57 | -8.615850e-47 |
Msa1333730 | Msa1348470 | -0.816957 | 4.230629e-52 | -8.615850e-47 |
Msa1335230 | Msa1348470 | -0.815431 | 9.279150e-52 | -8.615850e-47 |
Msa1335710 | Msa1348470 | -0.821861 | 3.223277e-53 | -8.615850e-47 |
Msa0369980 | Msa1348470 | 0.801928 | 7.144298e-49 | -8.615850e-47 |
Msa0376910 | Msa1348470 | -0.820173 | 7.887824e-53 | -8.615850e-47 |
Msa0377440 | Msa1348470 | -0.829856 | 4.072564e-55 | -8.615850e-47 |
Msa0378970 | Msa1348470 | -0.801615 | 8.280829e-49 | -8.615850e-47 |
Msa0381080 | Msa1348470 | -0.801171 | 1.021259e-48 | -8.615850e-47 |
Msa0387050 | Msa1348470 | -0.809632 | 1.719468e-50 | -8.615850e-47 |
Msa0390960 | Msa1348470 | -0.828544 | 8.476360e-55 | -8.615850e-47 |
Msa0392270 | Msa1348470 | -0.835590 | 1.535416e-56 | -8.615850e-47 |
Msa0394340 | Msa1348470 | -0.805389 | 1.367017e-49 | -8.615850e-47 |
Msa0409200 | Msa1348470 | -0.801575 | 8.439919e-49 | -8.615850e-47 |
Msa0412840 | Msa1348470 | -0.845432 | 4.076648e-59 | -8.615850e-47 |
Msa0417650 | Msa1348470 | -0.824514 | 7.746627e-54 | -8.615850e-47 |
Msa0417730 | Msa1348470 | -0.801613 | 8.290684e-49 | -8.615850e-47 |
Msa0422010 | Msa1348470 | -0.800727 | 1.258087e-48 | -8.615850e-47 |
Msa0426900 | Msa1348470 | -0.807628 | 4.606248e-50 | -8.615850e-47 |
Msa0430950 | Msa1348470 | -0.806448 | 8.187814e-50 | -8.615850e-47 |
Msa0433410 | Msa1348470 | 0.857958 | 1.144232e-62 | -8.615850e-47 |
Msa0436760 | Msa1348470 | -0.813019 | 3.164170e-51 | -8.615850e-47 |
Msa0437400 | Msa1348470 | -0.811845 | 5.711094e-51 | -8.615850e-47 |
Msa0442610 | Msa1348470 | -0.807158 | 5.793979e-50 | -8.615850e-47 |
Msa0453350 | Msa1348470 | -0.802062 | 6.702888e-49 | -8.615850e-47 |
Msa0457510 | Msa1348470 | -0.852831 | 3.565374e-61 | -8.615850e-47 |
Msa0464900 | Msa1348470 | -0.810430 | 1.157062e-50 | -8.615850e-47 |
Msa0465670 | Msa1348470 | 0.804055 | 2.595621e-49 | -8.615850e-47 |
Msa0469940 | Msa1348470 | 0.813882 | 2.043308e-51 | -8.615850e-47 |
Msa0471900 | Msa1348470 | -0.825065 | 5.742698e-54 | -8.615850e-47 |
Msa0476880 | Msa1348470 | -0.806148 | 9.467759e-50 | -8.615850e-47 |
Msa0477130 | Msa1348470 | 0.844729 | 6.311827e-59 | -8.615850e-47 |
Msa0481030 | Msa1348470 | -0.810361 | 1.197590e-50 | -8.615850e-47 |
Msa0482190 | Msa1348470 | 0.800882 | 1.169734e-48 | -8.615850e-47 |
Msa0981310 | Msa1348470 | -0.828350 | 9.441227e-55 | -8.615850e-47 |
Msa0990580 | Msa1348470 | -0.811886 | 5.595034e-51 | -8.615850e-47 |
Msa0992580 | Msa1348470 | -0.816530 | 5.274172e-52 | -8.615850e-47 |
Msa0992600 | Msa1348470 | -0.821869 | 3.210321e-53 | -8.615850e-47 |
Msa0999100 | Msa1348470 | -0.813214 | 2.865980e-51 | -8.615850e-47 |
Msa1001390 | Msa1348470 | -0.805857 | 1.090233e-49 | -8.615850e-47 |
Msa1002850 | Msa1348470 | -0.805141 | 1.540707e-49 | -8.615850e-47 |
Msa1006850 | Msa1348470 | -0.801705 | 7.939414e-49 | -8.615850e-47 |
Msa1018990 | Msa1348470 | 0.844669 | 6.553033e-59 | -8.615850e-47 |
Msa1021510 | Msa1348470 | -0.823321 | 1.475216e-53 | -8.615850e-47 |
Msa1023920 | Msa1348470 | -0.821020 | 5.041169e-53 | -8.615850e-47 |
Msa1028590 | Msa1348470 | -0.811677 | 6.211864e-51 | -8.615850e-47 |
Msa1031770 | Msa1348470 | -0.847053 | 1.474980e-59 | -8.615850e-47 |
Msa1039710 | Msa1348470 | 0.808594 | 2.868434e-50 | -8.615850e-47 |
Msa1062920 | Msa1348470 | -0.804783 | 1.830294e-49 | -8.615850e-47 |
Msa1067890 | Msa1348470 | 0.803110 | 4.075323e-49 | -8.615850e-47 |
Msa1070840 | Msa1348470 | -0.833422 | 5.383124e-56 | -8.615850e-47 |
Msa1073070 | Msa1348470 | 0.808690 | 2.736514e-50 | -8.615850e-47 |
Msa1079730 | Msa1348470 | 0.810832 | 9.472405e-51 | -8.615850e-47 |
Msa1080270 | Msa1348470 | -0.826374 | 2.810037e-54 | -8.615850e-47 |
Msa1080330 | Msa1348470 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
Msa1082500 | Msa1348470 | -0.807082 | 6.013664e-50 | -8.615850e-47 |
Msa1087980 | Msa1348470 | -0.805695 | 1.178793e-49 | -8.615850e-47 |
Msa1089320 | Msa1348470 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
Msa1090260 | Msa1348470 | -0.800997 | 1.108208e-48 | -8.615850e-47 |
Msa1102790 | Msa1348470 | -0.808065 | 3.719078e-50 | -8.615850e-47 |
Msa1105190 | Msa1348470 | -0.800051 | 1.727387e-48 | -8.615850e-47 |
Msa1105500 | Msa1348470 | -0.826165 | 3.151206e-54 | -8.615850e-47 |
Msa0240300 | Msa1348470 | -0.818267 | 2.142580e-52 | -8.615850e-47 |
Msa0241470 | Msa1348470 | -0.806024 | 1.005567e-49 | -8.615850e-47 |
Msa0243250 | Msa1348470 | -0.807371 | 5.222458e-50 | -8.615850e-47 |
Msa0245940 | Msa1348470 | -0.803556 | 3.294734e-49 | -8.615850e-47 |
Msa0248520 | Msa1348470 | -0.804744 | 1.864981e-49 | -8.615850e-47 |
Msa0250670 | Msa1348470 | -0.809293 | 2.032638e-50 | -8.615850e-47 |
Msa0251770 | Msa1348470 | -0.807390 | 5.175122e-50 | -8.615850e-47 |
Msa0253340 | Msa1348470 | -0.833960 | 3.949397e-56 | -8.615850e-47 |
Msa0257500 | Msa1348470 | -0.811909 | 5.530090e-51 | -8.615850e-47 |
Msa0261720 | Msa1348470 | -0.826346 | 2.852802e-54 | -8.615850e-47 |
Msa0262370 | Msa1348470 | -0.826133 | 3.206016e-54 | -8.615850e-47 |
Msa0264930 | Msa1348470 | -0.801711 | 7.914765e-49 | -8.615850e-47 |
Msa0265150 | Msa1348470 | -0.808855 | 2.523050e-50 | -8.615850e-47 |
Msa0271790 | Msa1348470 | -0.804633 | 1.967024e-49 | -8.615850e-47 |
Msa0281480 | Msa1348470 | -0.809764 | 1.610611e-50 | -8.615850e-47 |
Msa0281640 | Msa1348470 | -0.810265 | 1.255910e-50 | -8.615850e-47 |
Msa0287410 | Msa1348470 | -0.813031 | 3.143708e-51 | -8.615850e-47 |
Msa0289400 | Msa1348470 | -0.802336 | 5.888769e-49 | -8.615850e-47 |
Msa0290760 | Msa1348470 | -0.804882 | 1.744755e-49 | -8.615850e-47 |
Msa0292120 | Msa1348470 | -0.814380 | 1.586808e-51 | -8.615850e-47 |
Msa0292170 | Msa1348470 | -0.850041 | 2.194334e-60 | -8.615850e-47 |
Msa0299580 | Msa1348470 | -0.811128 | 8.174484e-51 | -8.615850e-47 |
Msa0300150 | Msa1348470 | -0.813749 | 2.186481e-51 | -8.615850e-47 |
Msa0306210 | Msa1348470 | 0.828306 | 9.675223e-55 | -8.615850e-47 |
Msa0308200 | Msa1348470 | -0.806107 | 9.660415e-50 | -8.615850e-47 |
Msa0310430 | Msa1348470 | -0.823350 | 1.452405e-53 | -8.615850e-47 |
Msa0310600 | Msa1348470 | -0.826126 | 3.219310e-54 | -8.615850e-47 |
Msa0310660 | Msa1348470 | -0.830864 | 2.309967e-55 | -8.615850e-47 |
Msa0311720 | Msa1348470 | -0.820996 | 5.105531e-53 | -8.615850e-47 |
Msa0319170 | Msa1348470 | -0.810704 | 1.009950e-50 | -8.615850e-47 |
Msa0320610 | Msa1348470 | -0.801667 | 8.081317e-49 | -8.615850e-47 |
Msa0320800 | Msa1348470 | -0.824837 | 6.499911e-54 | -8.615850e-47 |
Msa0326110 | Msa1348470 | -0.830973 | 2.171335e-55 | -8.615850e-47 |
Msa0327410 | Msa1348470 | -0.824452 | 8.011190e-54 | -8.615850e-47 |
Msa0337060 | Msa1348470 | -0.830508 | 2.822608e-55 | -8.615850e-47 |
Msa0337590 | Msa1348470 | -0.807449 | 5.027066e-50 | -8.615850e-47 |
Msa0340170 | Msa1348470 | -0.802777 | 4.776756e-49 | -8.615850e-47 |
Msa0344530 | Msa1348470 | -0.807853 | 4.125279e-50 | -8.615850e-47 |
Msa0344690 | Msa1348470 | 0.828092 | 1.089586e-54 | -8.615850e-47 |
Msa1107900 | Msa1348470 | -0.821185 | 4.618713e-53 | -8.615850e-47 |
Msa1113010 | Msa1348470 | -0.814782 | 1.292563e-51 | -8.615850e-47 |
Msa1118760 | Msa1348470 | -0.817196 | 3.737926e-52 | -8.615850e-47 |
Msa1124540 | Msa1348470 | 0.849834 | 2.507499e-60 | -8.615850e-47 |
Msa1130530 | Msa1348470 | -0.805947 | 1.043866e-49 | -8.615850e-47 |
Msa1144970 | Msa1348470 | -0.800644 | 1.308181e-48 | -8.615850e-47 |
Msa1156150 | Msa1348470 | 0.808797 | 2.596063e-50 | -8.615850e-47 |
Msa1158660 | Msa1348470 | -0.811308 | 7.470399e-51 | -8.615850e-47 |
Msa1168040 | Msa1348470 | 0.819214 | 1.306385e-52 | -8.615850e-47 |
Msa1174310 | Msa1348470 | -0.819443 | 1.158356e-52 | -8.615850e-47 |
Msa1174850 | Msa1348470 | -0.805180 | 1.512051e-49 | -8.615850e-47 |
Msa1176270 | Msa1348470 | -0.809377 | 1.950488e-50 | -8.615850e-47 |
Msa1183100 | Msa1348470 | 0.860515 | 1.957349e-63 | -8.615850e-47 |
Msa1188600 | Msa1348470 | 0.808899 | 2.468859e-50 | -8.615850e-47 |
Msa1202770 | Msa1348470 | 0.823196 | 1.577510e-53 | -8.615850e-47 |
Msa1204530 | Msa1348470 | -0.819603 | 1.065007e-52 | -8.615850e-47 |
Msa1204630 | Msa1348470 | -0.821014 | 5.058028e-53 | -8.615850e-47 |
Msa1207310 | Msa1348470 | -0.819438 | 1.161424e-52 | -8.615850e-47 |
Msa1214880 | Msa1348470 | -0.812554 | 3.999575e-51 | -8.615850e-47 |
Msa1224480 | Msa1348470 | -0.829099 | 6.220291e-55 | -8.615850e-47 |
Msa0484720 | Msa1348470 | -0.806858 | 6.704987e-50 | -8.615850e-47 |
Msa0484780 | Msa1348470 | -0.819408 | 1.179984e-52 | -8.615850e-47 |
Msa0485490 | Msa1348470 | -0.819234 | 1.292655e-52 | -8.615850e-47 |
Msa0489610 | Msa1348470 | -0.800400 | 1.467120e-48 | -8.615850e-47 |
Msa0501450 | Msa1348470 | -0.802903 | 4.499060e-49 | -8.615850e-47 |
Msa0506830 | Msa1348470 | -0.801151 | 1.030945e-48 | -8.615850e-47 |
Msa0512870 | Msa1348470 | -0.804552 | 2.045564e-49 | -8.615850e-47 |
Msa0517650 | Msa1348470 | -0.817248 | 3.639288e-52 | -8.615850e-47 |
Msa0518380 | Msa1348470 | -0.813675 | 2.270419e-51 | -8.615850e-47 |
Msa0518440 | Msa1348470 | -0.828493 | 8.717177e-55 | -8.615850e-47 |
Msa0522070 | Msa1348470 | -0.801071 | 1.070437e-48 | -8.615850e-47 |
Msa0523460 | Msa1348470 | -0.803072 | 4.149870e-49 | -8.615850e-47 |
Msa0523910 | Msa1348470 | -0.806998 | 6.263730e-50 | -8.615850e-47 |
Msa0534730 | Msa1348470 | -0.821999 | 2.994920e-53 | -8.615850e-47 |
Msa0546570 | Msa1348470 | -0.808731 | 2.681116e-50 | -8.615850e-47 |
Msa0558690 | Msa1348470 | -0.813461 | 2.529834e-51 | -8.615850e-47 |
Msa0559500 | Msa1348470 | -0.815072 | 1.114696e-51 | -8.615850e-47 |
Msa0561230 | Msa1348470 | -0.814738 | 1.321961e-51 | -8.615850e-47 |
Msa0566350 | Msa1348470 | -0.800375 | 1.484553e-48 | -8.615850e-47 |
Msa0571780 | Msa1348470 | -0.825058 | 5.765645e-54 | -8.615850e-47 |
Msa0572480 | Msa1348470 | -0.803274 | 3.769457e-49 | -8.615850e-47 |
Msa0575470 | Msa1348470 | -0.809904 | 1.502572e-50 | -8.615850e-47 |
Msa0577500 | Msa1348470 | -0.816847 | 4.478093e-52 | -8.615850e-47 |
Msa0579100 | Msa1348470 | -0.805201 | 1.496525e-49 | -8.615850e-47 |
Msa0579130 | Msa1348470 | -0.835168 | 1.962845e-56 | -8.615850e-47 |
Msa0579200 | Msa1348470 | -0.823165 | 1.604432e-53 | -8.615850e-47 |
Msa0580000 | Msa1348470 | -0.802792 | 4.742559e-49 | -8.615850e-47 |
Msa0587190 | Msa1348470 | -0.819126 | 1.367908e-52 | -8.615850e-47 |
Msa0598160 | Msa1348470 | -0.825039 | 5.825686e-54 | -8.615850e-47 |
Msa0599800 | Msa1348470 | 0.815361 | 9.615952e-52 | -8.615850e-47 |
Msa0844110 | Msa1348470 | -0.839665 | 1.383380e-57 | -8.615850e-47 |
Msa0844230 | Msa1348470 | -0.805129 | 1.549299e-49 | -8.615850e-47 |
Msa0861090 | Msa1348470 | -0.816354 | 5.773930e-52 | -8.615850e-47 |
Msa0864470 | Msa1348470 | 0.803692 | 3.088014e-49 | -8.615850e-47 |
Msa0866400 | Msa1348470 | -0.834956 | 2.220902e-56 | -8.615850e-47 |
Msa0866410 | Msa1348470 | -0.817799 | 2.734610e-52 | -8.615850e-47 |
Msa0868160 | Msa1348470 | -0.814367 | 1.597013e-51 | -8.615850e-47 |
Msa0879600 | Msa1348470 | -0.809676 | 1.682144e-50 | -8.615850e-47 |
Msa0892570 | Msa1348470 | -0.824784 | 6.690614e-54 | -8.615850e-47 |
Msa0918390 | Msa1348470 | -0.812159 | 4.877442e-51 | -8.615850e-47 |
Msa0926470 | Msa1348470 | -0.806361 | 8.539073e-50 | -8.615850e-47 |
Msa0930860 | Msa1348470 | -0.830789 | 2.408924e-55 | -8.615850e-47 |
Msa0933310 | Msa1348470 | -0.804904 | 1.726871e-49 | -8.615850e-47 |
Msa0942550 | Msa1348470 | 0.813377 | 2.639214e-51 | -8.615850e-47 |
Msa0942560 | Msa1348470 | 0.823791 | 1.145375e-53 | -8.615850e-47 |
Msa0958030 | Msa1348470 | -0.820244 | 7.598772e-53 | -8.615850e-47 |
Msa0965020 | Msa1348470 | -0.800356 | 1.497719e-48 | -8.615850e-47 |
Msa0971090 | Msa1348470 | -0.806347 | 8.596680e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348470 | MtrunA17_Chr3g0139001 | 90.400 | 125 | 12 | 0 | 1 | 125 | 23 | 147 | 6.84e-72 | 213 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348470 | AT5G10700.1 | 50.000 | 120 | 43 | 3 | 6 | 125 | 24 | 126 | 1.50e-33 | 116 |
Msa1348470 | AT5G10700.2 | 50.000 | 120 | 43 | 3 | 6 | 125 | 24 | 126 | 1.56e-33 | 115 |
Find 39 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGTTGACTCATTGAGTTAA+AGG | 0.322492 | tig0010468:-55052 | None:intergenic |
CTGATCGATACTTGGCCATT+AGG | 0.378184 | tig0010468:+55165 | Msa1348470:CDS |
TTGATTCTATGCACAAAGTA+AGG | 0.385439 | tig0010468:+55283 | Msa1348470:CDS |
ACGCTTCTGTTTCCGCGGTT+TGG | 0.395935 | tig0010468:+55211 | Msa1348470:CDS |
AGTGGTGGAATCGGTGGAGG+CGG | 0.421097 | tig0010468:-55073 | None:intergenic |
TGAGTAACCACACTGCCTAA+TGG | 0.453176 | tig0010468:-55180 | None:intergenic |
GGTGACAGGATCGTCTTTGT+TGG | 0.456796 | tig0010468:-55235 | None:intergenic |
TGGTCCAATACGTGGTGCTC+CGG | 0.468634 | tig0010468:+55136 | Msa1348470:CDS |
GAGAGTGGTGGAATCGGTGG+AGG | 0.477145 | tig0010468:-55076 | None:intergenic |
TAAAGGTGAGCTGACTCGTC+CGG | 0.477990 | tig0010468:-55035 | None:intergenic |
CTCCACATCAACTGATTCGC+CGG | 0.486687 | tig0010468:+55098 | Msa1348470:CDS |
CACGCCGGAGCACCACGTAT+TGG | 0.503895 | tig0010468:-55140 | None:intergenic |
GGCGTGATCTGATCGATACT+TGG | 0.507820 | tig0010468:+55157 | Msa1348470:CDS |
CTACAATAATCAACGGTGAC+AGG | 0.516772 | tig0010468:-55249 | None:intergenic |
TGAGAAGGCGAGGTACGAAC+GGG | 0.519329 | tig0010468:-54968 | None:intergenic |
GTGGTGGAATCGGTGGAGGC+GGG | 0.520690 | tig0010468:-55072 | None:intergenic |
TTGAGAAGGCGAGGTACGAA+CGG | 0.522363 | tig0010468:-54969 | None:intergenic |
TGTGGAGAGAGTGGTGGAAT+CGG | 0.534342 | tig0010468:-55082 | None:intergenic |
AGGCGAGGTACGAACGGGAG+GGG | 0.553596 | tig0010468:-54963 | None:intergenic |
TTCCGGCGAATCAGTTGATG+TGG | 0.555932 | tig0010468:-55100 | None:intergenic |
GGGTTGAAGAGACGAAGCGT+AGG | 0.561056 | tig0010468:-54943 | None:intergenic |
TTAGGCAGTGTGGTTACTCA+AGG | 0.562328 | tig0010468:+55183 | Msa1348470:CDS |
GAAGGCGAGGTACGAACGGG+AGG | 0.562660 | tig0010468:-54965 | None:intergenic |
GGAGAGAGTGGTGGAATCGG+TGG | 0.566146 | tig0010468:-55079 | None:intergenic |
AAGGCGAGGTACGAACGGGA+GGG | 0.566860 | tig0010468:-54964 | None:intergenic |
GCCGGAAAACGTCGATGTTG+TGG | 0.569743 | tig0010468:+55116 | Msa1348470:CDS |
TGAAGAGACGAAGCGTAGGA+AGG | 0.573707 | tig0010468:-54939 | None:intergenic |
ACTAAACTTCGTTCTTGAGA+AGG | 0.577942 | tig0010468:-54983 | None:intergenic |
GAAGAGACGAAGCGTAGGAA+GGG | 0.601157 | tig0010468:-54938 | None:intergenic |
GTCGGGGCTACAATAATCAA+CGG | 0.604557 | tig0010468:-55256 | None:intergenic |
ACTTCGTTCTTGAGAAGGCG+AGG | 0.622634 | tig0010468:-54978 | None:intergenic |
TTGTCACGCTTCTGTTTCCG+CGG | 0.641384 | tig0010468:+55206 | Msa1348470:CDS |
ATCAGTTGATGTGGAGAGAG+TGG | 0.646257 | tig0010468:-55091 | None:intergenic |
CGATGTTGTGGTCCAATACG+TGG | 0.652164 | tig0010468:+55128 | Msa1348470:CDS |
GTCTTTGTTGGACCAAACCG+CGG | 0.653891 | tig0010468:-55223 | None:intergenic |
AGTTGATGTGGAGAGAGTGG+TGG | 0.659985 | tig0010468:-55088 | None:intergenic |
TACTTGGCCATTAGGCAGTG+TGG | 0.667910 | tig0010468:+55173 | Msa1348470:CDS |
GTTTAGTGTCACTTTACACG+CGG | 0.717247 | tig0010468:+54999 | Msa1348470:CDS |
AAGTATCGATCAGATCACGC+CGG | 0.740521 | tig0010468:-55155 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGCATAGAATCAATTTTGTC+GGG | - | tig0010468:55276-55295 | None:intergenic | 30.0% |
! | GTGCATAGAATCAATTTTGT+CGG | - | tig0010468:55277-55296 | None:intergenic | 30.0% |
ACTAAACTTCGTTCTTGAGA+AGG | - | tig0010468:54986-55005 | None:intergenic | 35.0% | |
! | GCATAGAATCAATTTTGTCG+GGG | - | tig0010468:55275-55294 | None:intergenic | 35.0% |
!! | GTTTAGTGTCACTTTACACG+CGG | + | tig0010468:54999-55018 | Msa1348470:CDS | 40.0% |
! | GGGTTGACTCATTGAGTTAA+AGG | - | tig0010468:55055-55074 | None:intergenic | 40.0% |
CTACAATAATCAACGGTGAC+AGG | - | tig0010468:55252-55271 | None:intergenic | 40.0% | |
! | ACTCGTCCGGTTTGAAAAAG+AGG | - | tig0010468:55025-55044 | None:intergenic | 45.0% |
! | ATCAGTTGATGTGGAGAGAG+TGG | - | tig0010468:55094-55113 | None:intergenic | 45.0% |
! | ACCACAACATCGACGTTTTC+CGG | - | tig0010468:55120-55139 | None:intergenic | 45.0% |
!! | AAGTATCGATCAGATCACGC+CGG | - | tig0010468:55158-55177 | None:intergenic | 45.0% |
CTGATCGATACTTGGCCATT+AGG | + | tig0010468:55165-55184 | Msa1348470:CDS | 45.0% | |
TGAGTAACCACACTGCCTAA+TGG | - | tig0010468:55183-55202 | None:intergenic | 45.0% | |
TTAGGCAGTGTGGTTACTCA+AGG | + | tig0010468:55183-55202 | Msa1348470:CDS | 45.0% | |
GTCGGGGCTACAATAATCAA+CGG | - | tig0010468:55259-55278 | None:intergenic | 45.0% | |
GAAGAGACGAAGCGTAGGAA+GGG | - | tig0010468:54941-54960 | None:intergenic | 50.0% | |
TGAAGAGACGAAGCGTAGGA+AGG | - | tig0010468:54942-54961 | None:intergenic | 50.0% | |
TTGAGAAGGCGAGGTACGAA+CGG | - | tig0010468:54972-54991 | None:intergenic | 50.0% | |
ACTTCGTTCTTGAGAAGGCG+AGG | - | tig0010468:54981-55000 | None:intergenic | 50.0% | |
!!! | ACGCGGCCTCTTTTTCAAAC+CGG | + | tig0010468:55016-55035 | Msa1348470:CDS | 50.0% |
!! | TAAAGGTGAGCTGACTCGTC+CGG | - | tig0010468:55038-55057 | None:intergenic | 50.0% |
! | TGTGGAGAGAGTGGTGGAAT+CGG | - | tig0010468:55085-55104 | None:intergenic | 50.0% |
! | AGTTGATGTGGAGAGAGTGG+TGG | - | tig0010468:55091-55110 | None:intergenic | 50.0% |
!! | CTCCACATCAACTGATTCGC+CGG | + | tig0010468:55098-55117 | Msa1348470:CDS | 50.0% |
! | TTCCGGCGAATCAGTTGATG+TGG | - | tig0010468:55103-55122 | None:intergenic | 50.0% |
CGATGTTGTGGTCCAATACG+TGG | + | tig0010468:55128-55147 | Msa1348470:CDS | 50.0% | |
GGCGTGATCTGATCGATACT+TGG | + | tig0010468:55157-55176 | Msa1348470:CDS | 50.0% | |
TACTTGGCCATTAGGCAGTG+TGG | + | tig0010468:55173-55192 | Msa1348470:CDS | 50.0% | |
TTGTCACGCTTCTGTTTCCG+CGG | + | tig0010468:55206-55225 | Msa1348470:CDS | 50.0% | |
GTCTTTGTTGGACCAAACCG+CGG | - | tig0010468:55226-55245 | None:intergenic | 50.0% | |
GGTGACAGGATCGTCTTTGT+TGG | - | tig0010468:55238-55257 | None:intergenic | 50.0% | |
GGGTTGAAGAGACGAAGCGT+AGG | - | tig0010468:54946-54965 | None:intergenic | 55.0% | |
TGAGAAGGCGAGGTACGAAC+GGG | - | tig0010468:54971-54990 | None:intergenic | 55.0% | |
GCCGGAAAACGTCGATGTTG+TGG | + | tig0010468:55116-55135 | Msa1348470:CDS | 55.0% | |
TGGTCCAATACGTGGTGCTC+CGG | + | tig0010468:55136-55155 | Msa1348470:CDS | 55.0% | |
ACGCTTCTGTTTCCGCGGTT+TGG | + | tig0010468:55211-55230 | Msa1348470:CDS | 55.0% | |
AAGGCGAGGTACGAACGGGA+GGG | - | tig0010468:54967-54986 | None:intergenic | 60.0% | |
! | AGTGGTGGAATCGGTGGAGG+CGG | - | tig0010468:55076-55095 | None:intergenic | 60.0% |
! | GAGAGTGGTGGAATCGGTGG+AGG | - | tig0010468:55079-55098 | None:intergenic | 60.0% |
! | GGAGAGAGTGGTGGAATCGG+TGG | - | tig0010468:55082-55101 | None:intergenic | 60.0% |
AGGCGAGGTACGAACGGGAG+GGG | - | tig0010468:54966-54985 | None:intergenic | 65.0% | |
GAAGGCGAGGTACGAACGGG+AGG | - | tig0010468:54968-54987 | None:intergenic | 65.0% | |
! | GTGGTGGAATCGGTGGAGGC+GGG | - | tig0010468:55075-55094 | None:intergenic | 65.0% |
! | CACGCCGGAGCACCACGTAT+TGG | - | tig0010468:55143-55162 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0010468 | gene | 54928 | 55302 | 54928 | ID=Msa1348470;Name=Msa1348470 |
tig0010468 | mRNA | 54928 | 55302 | 54928 | ID=Msa1348470-mRNA-1;Parent=Msa1348470;Name=Msa1348470-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|125 |
tig0010468 | exon | 54928 | 55302 | 54928 | ID=Msa1348470-mRNA-1:exon:6439;Parent=Msa1348470-mRNA-1 |
tig0010468 | CDS | 54928 | 55302 | 54928 | ID=Msa1348470-mRNA-1:cds;Parent=Msa1348470-mRNA-1 |
Gene Sequence |
Protein sequence |