Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381590 | XP_003603139.1 | 88.099 | 605 | 19 | 1 | 1 | 552 | 1 | 605 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381590 | sp|Q96AE4|FUBP1_HUMAN | 31.984 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 2.61e-23 | 107 |
| Msa0381590 | sp|Q96AE4|FUBP1_HUMAN | 33.921 | 227 | 129 | 6 | 38 | 251 | 231 | 449 | 4.13e-21 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381590 | G7J7L9 | 88.099 | 605 | 19 | 1 | 1 | 552 | 1 | 605 | 0.0 | 976 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0381590 | 0.820301 | 7.374860e-53 | -8.615850e-47 |
| Msa0140520 | Msa0381590 | 0.893470 | 6.100519e-75 | -8.615850e-47 |
| Msa0156650 | Msa0381590 | 0.802574 | 5.259830e-49 | -8.615850e-47 |
| Msa0162770 | Msa0381590 | 0.847382 | 1.198457e-59 | -8.615850e-47 |
| Msa0169140 | Msa0381590 | 0.831524 | 1.590088e-55 | -8.615850e-47 |
| Msa0178860 | Msa0381590 | 0.802536 | 5.355035e-49 | -8.615850e-47 |
| Msa0185640 | Msa0381590 | 0.822274 | 2.585534e-53 | -8.615850e-47 |
| Msa0196130 | Msa0381590 | 0.805648 | 1.206021e-49 | -8.615850e-47 |
| Msa0229490 | Msa0381590 | 0.823571 | 1.289018e-53 | -8.615850e-47 |
| Msa0375060 | Msa0381590 | 0.809769 | 1.606300e-50 | -8.615850e-47 |
| Msa0381590 | Msa0381600 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0381590 | Msa0443920 | -0.801810 | 7.552953e-49 | -8.615850e-47 |
| Msa0381590 | Msa0459770 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0381590 | Msa0465670 | 0.802432 | 5.627398e-49 | -8.615850e-47 |
| Msa0381590 | Msa0467900 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0381590 | Msa0467960 | 0.818899 | 1.540615e-52 | -8.615850e-47 |
| Msa0381590 | Msa0531990 | 0.815715 | 8.020583e-52 | -8.615850e-47 |
| Msa0381590 | Msa0532100 | 0.820001 | 8.637789e-53 | -8.615850e-47 |
| Msa0381590 | Msa0553220 | 0.840774 | 7.099013e-58 | -8.615850e-47 |
| Msa0381590 | Msa0562300 | 0.800721 | 1.261815e-48 | -8.615850e-47 |
| Msa0381590 | Msa0585000 | 0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0381590 | Msa0607340 | 0.812869 | 3.412761e-51 | -8.615850e-47 |
| Msa0381590 | Msa0647450 | 0.844671 | 6.542803e-59 | -8.615850e-47 |
| Msa0381590 | Msa0661190 | 0.821435 | 4.043014e-53 | -8.615850e-47 |
| Msa0381590 | Msa0744170 | 0.819842 | 9.390623e-53 | -8.615850e-47 |
| Msa0381590 | Msa0756630 | 0.818496 | 1.901814e-52 | -8.615850e-47 |
| Msa0381590 | Msa0788070 | 0.830107 | 3.538031e-55 | -8.615850e-47 |
| Msa0381590 | Msa0825240 | 0.816850 | 4.471327e-52 | -8.615850e-47 |
| Msa0381590 | Msa0864470 | 0.806948 | 6.418538e-50 | -8.615850e-47 |
| Msa0381590 | Msa0930460 | 0.874564 | 6.118185e-68 | -8.615850e-47 |
| Msa0381590 | Msa0992490 | 0.811889 | 5.586257e-51 | -8.615850e-47 |
| Msa0381590 | Msa1037700 | 0.824681 | 7.074972e-54 | -8.615850e-47 |
| Msa0381590 | Msa1073070 | 0.821234 | 4.499843e-53 | -8.615850e-47 |
| Msa0381590 | Msa1075220 | 0.820684 | 6.023952e-53 | -8.615850e-47 |
| Msa0381590 | Msa1079370 | 0.820864 | 5.476138e-53 | -8.615850e-47 |
| Msa0381590 | Msa1116130 | 0.837504 | 5.000479e-57 | -8.615850e-47 |
| Msa0381590 | Msa1130210 | 0.806710 | 7.207768e-50 | -8.615850e-47 |
| Msa0381590 | Msa1139000 | 0.817551 | 3.109373e-52 | -8.615850e-47 |
| Msa0381590 | Msa1143930 | 0.833293 | 5.795072e-56 | -8.615850e-47 |
| Msa0381590 | Msa1157420 | 0.817149 | 3.831193e-52 | -8.615850e-47 |
| Msa0381590 | Msa1162550 | 0.822914 | 1.835556e-53 | -8.615850e-47 |
| Msa0381590 | Msa1183100 | 0.813409 | 2.597500e-51 | -8.615850e-47 |
| Msa0381590 | Msa1190890 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
| Msa0381590 | Msa1204980 | 0.834065 | 3.716941e-56 | -8.615850e-47 |
| Msa0381590 | Msa1205010 | 0.836472 | 9.172441e-57 | -8.615850e-47 |
| Msa0381590 | Msa1217430 | 0.823307 | 1.486250e-53 | -8.615850e-47 |
| Msa0381590 | Msa1256540 | 0.830825 | 2.361450e-55 | -8.615850e-47 |
| Msa0381590 | Msa1259490 | 0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0381590 | Msa1296960 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa0381590 | Msa1299180 | 0.829574 | 4.770145e-55 | -8.615850e-47 |
| Msa0381590 | Msa1302190 | 0.824073 | 9.835284e-54 | -8.615850e-47 |
| Msa0381590 | Msa1332040 | 0.818822 | 1.603795e-52 | -8.615850e-47 |
| Msa0381590 | Msa1369530 | -0.802856 | 4.599101e-49 | -8.615850e-47 |
| Msa0381590 | Msa1395230 | 0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0381590 | Msa1401530 | -0.802445 | 5.590530e-49 | -8.615850e-47 |
| Msa0381590 | Msa1417830 | 0.843283 | 1.540982e-58 | -8.615850e-47 |
| Msa0381590 | Msa1445420 | 0.841468 | 4.665018e-58 | -8.615850e-47 |
| Msa0381590 | Msa1445610 | 0.803585 | 3.249470e-49 | -8.615850e-47 |
| Msa0294560 | Msa0381590 | 0.802979 | 4.337562e-49 | -8.615850e-47 |
| Msa0302580 | Msa0381590 | 0.814909 | 1.211719e-51 | -8.615850e-47 |
| Msa0333720 | Msa0381590 | 0.801283 | 9.687212e-49 | -8.615850e-47 |
| Msa0342340 | Msa0381590 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381590 | MtrunA17_Chr3g0135621 | 87.438 | 605 | 23 | 3 | 1 | 552 | 1 | 605 | 0.0 | 960 |
| Msa0381590 | MtrunA17_Chr3g0135631 | 83.127 | 403 | 15 | 1 | 203 | 552 | 1 | 403 | 0.0 | 570 |
| Msa0381590 | MtrunA17_Chr1g0151761 | 55.860 | 657 | 155 | 20 | 1 | 552 | 1 | 627 | 4.61e-180 | 521 |
| Msa0381590 | MtrunA17_Chr3g0135641 | 98.413 | 189 | 3 | 0 | 1 | 189 | 1 | 189 | 2.98e-131 | 380 |
| Msa0381590 | MtrunA17_Chr3g0135641 | 46.377 | 69 | 34 | 2 | 182 | 249 | 90 | 156 | 7.67e-13 | 67.8 |
| Msa0381590 | MtrunA17_Chr5g0396111 | 56.069 | 173 | 72 | 1 | 82 | 250 | 181 | 353 | 4.44e-58 | 198 |
| Msa0381590 | MtrunA17_Chr7g0217251 | 27.736 | 530 | 259 | 30 | 68 | 530 | 141 | 613 | 8.20e-14 | 74.3 |
| Msa0381590 | MtrunA17_Chr1g0197441 | 29.032 | 217 | 123 | 6 | 89 | 291 | 39 | 238 | 5.16e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381590 | AT2G25970.1 | 48.998 | 549 | 176 | 19 | 26 | 500 | 66 | 584 | 5.01e-112 | 347 |
| Msa0381590 | AT1G33680.1 | 35.860 | 541 | 229 | 26 | 86 | 546 | 232 | 734 | 1.98e-54 | 197 |
| Msa0381590 | AT4G10070.1 | 37.732 | 485 | 213 | 19 | 82 | 538 | 172 | 595 | 4.31e-54 | 194 |
| Msa0381590 | AT5G04430.2 | 30.288 | 208 | 125 | 7 | 89 | 289 | 38 | 232 | 5.88e-14 | 73.6 |
| Msa0381590 | AT5G04430.1 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 1.52e-12 | 69.3 |
Find 225 sgRNAs with CRISPR-Local
Find 511 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGCCAGGCCCCGCCTTC+TGG | 0.193239 | 3_1:-83807723 | Msa0381590:CDS |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3_1:-83812776 | Msa0381590:CDS |
| TTCTACCGGGGCACGAATTC+AGG | 0.220193 | 3_1:-83811431 | Msa0381590:intron |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3_1:-83812663 | Msa0381590:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3_1:-83810137 | Msa0381590:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.252253 | 3_1:+83807964 | None:intergenic |
| CTCCTCCTTTACCGATTATA+AGG | 0.263800 | 3_1:+83811476 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3_1:-83811671 | Msa0381590:CDS |
| TTCACTTTCTTCTTCTCTAT+AGG | 0.271310 | 3_1:-83813091 | Msa0381590:five_prime_UTR |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3_1:+83807937 | None:intergenic |
| TCACTTTCTTCTTCTCTATA+GGG | 0.293585 | 3_1:-83813090 | Msa0381590:five_prime_UTR |
| CTCTATAGGGTTTGTTTCAA+TGG | 0.295151 | 3_1:-83813077 | Msa0381590:exon |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3_1:-83811638 | Msa0381590:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3_1:+83812674 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3_1:+83811220 | None:intergenic |
| TCTCCCCACACCTTATTGTT+TGG | 0.320962 | 3_1:+83811590 | None:intergenic |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.330555 | 3_1:+83807965 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.338429 | 3_1:-83807588 | Msa0381590:CDS |
| GAAACTCCTCAACCAGGTTA+TGG | 0.345359 | 3_1:-83807909 | Msa0381590:CDS |
| CTTTAGGTTGGCCTTATAAT+CGG | 0.348223 | 3_1:-83811487 | Msa0381590:intron |
| ATGTGTGAAGGAATTGGATT+AGG | 0.348844 | 3_1:+83813120 | None:intergenic |
| GACTGACCATAGCCTCCTGC+TGG | 0.350562 | 3_1:+83807756 | None:intergenic |
| CCGGTGGATATTCCGCCAAC+TGG | 0.354362 | 3_1:-83809935 | Msa0381590:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3_1:+83809850 | None:intergenic |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3_1:+83812898 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3_1:+83812970 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3_1:-83811665 | Msa0381590:CDS |
| AGTGCAAATCCACCTGCTTA+TGG | 0.362303 | 3_1:-83807798 | Msa0381590:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3_1:+83811175 | None:intergenic |
| AGTTGGAAGTGTGCCCCTCT+TGG | 0.365119 | 3_1:+83808009 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3_1:-83812705 | Msa0381590:CDS |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3_1:+83807879 | None:intergenic |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3_1:-83811680 | Msa0381590:intron |
| GAGGGGCACACTTCCAACTA+TGG | 0.374400 | 3_1:-83808005 | Msa0381590:CDS |
| CCTGCACAACAAGCTGGTTA+TGG | 0.376085 | 3_1:-83810044 | Msa0381590:CDS |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3_1:-83811600 | Msa0381590:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3_1:+83812899 | None:intergenic |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3_1:+83813006 | None:intergenic |
| AAACTCCTCAACCAGGTTAT+GGG | 0.389331 | 3_1:-83807908 | Msa0381590:CDS |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3_1:-83812770 | Msa0381590:CDS |
| TGGAGCACCGTTATCGGACT+TGG | 0.399369 | 3_1:+83812889 | None:intergenic |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3_1:-83807879 | Msa0381590:CDS |
| TTCCATATGACGGTGGAGTC+TGG | 0.403625 | 3_1:+83807601 | None:intergenic |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3_1:-83809843 | Msa0381590:CDS |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3_1:-83807855 | Msa0381590:CDS |
| GGCCAGACTCCACCGTCATA+TGG | 0.410070 | 3_1:-83807603 | Msa0381590:CDS |
| AACTGCACAGGCTGTTCCAC+AGG | 0.415355 | 3_1:-83807523 | Msa0381590:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3_1:-83810082 | Msa0381590:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3_1:+83807880 | None:intergenic |
| CATATCCAGAAGGCGGGGCC+TGG | 0.418708 | 3_1:+83807718 | None:intergenic |
| AACACGATGTGTGAAGGAAT+TGG | 0.418779 | 3_1:+83813114 | None:intergenic |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3_1:-83812662 | Msa0381590:CDS |
| GCTTGTTGTGCAGGAGCAGC+AGG | 0.419616 | 3_1:+83810053 | None:intergenic |
| TCTGGTTATGGACCTGGTTA+TGG | 0.421938 | 3_1:-83807843 | Msa0381590:CDS |
| CTGGTTGAGGAGTTTCTTGT+TGG | 0.423458 | 3_1:+83807916 | None:intergenic |
| GGTCCTCCACAACCAGCTGA+TGG | 0.427847 | 3_1:-83809819 | Msa0381590:CDS |
| CCATAGCCTCCTGCTGGGCT+AGG | 0.435681 | 3_1:+83807762 | None:intergenic |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3_1:+83807956 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.440407 | 3_1:-83810038 | Msa0381590:CDS |
| CGATTGTGGAGCACCGTTAT+CGG | 0.444219 | 3_1:+83812883 | None:intergenic |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3_1:-83811637 | Msa0381590:CDS |
| CGATAACGGTGCTCCACAAT+CGG | 0.446619 | 3_1:-83812882 | Msa0381590:CDS |
| GAGTCTGGCCATAGCTAGGC+TGG | 0.448899 | 3_1:+83807616 | None:intergenic |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3_1:+83807871 | None:intergenic |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3_1:+83810079 | None:intergenic |
| CCATAACCAGCTTGTTGTGC+AGG | 0.455611 | 3_1:+83810044 | None:intergenic |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3_1:+83807872 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3_1:+83810084 | None:intergenic |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3_1:-83811167 | Msa0381590:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3_1:-83812734 | Msa0381590:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3_1:+83812782 | None:intergenic |
| AGAAGGCGGGGCCTGGCTAG+AGG | 0.466470 | 3_1:+83807725 | None:intergenic |
| GATAACGGTGCTCCACAATC+GGG | 0.467332 | 3_1:-83812881 | Msa0381590:CDS |
| GTTGGAAGTGTGCCCCTCTT+GGG | 0.469268 | 3_1:+83808010 | None:intergenic |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3_1:+83811176 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3_1:-83812827 | Msa0381590:CDS |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3_1:-83812797 | Msa0381590:CDS |
| GTCCTCCACAACCAGCTGAT+GGG | 0.476711 | 3_1:-83809818 | Msa0381590:intron |
| GAAGTGTGCCCCTCTTGGGT+TGG | 0.479594 | 3_1:+83808014 | None:intergenic |
| TTATGGTGCTAGTTATGCTC+AGG | 0.481239 | 3_1:-83807571 | Msa0381590:CDS |
| GAAGGCGGGGCCTGGCTAGA+GGG | 0.486048 | 3_1:+83807726 | None:intergenic |
| GGGTATGGTCCGCAATCATA+TGG | 0.486408 | 3_1:-83807654 | Msa0381590:CDS |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3_1:-83810029 | Msa0381590:CDS |
| CCTAGCCCAGCAGGAGGCTA+TGG | 0.490924 | 3_1:-83807762 | Msa0381590:CDS |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.492893 | 3_1:-83811445 | Msa0381590:CDS |
| GCTGAGCATATCCAGAAGGC+GGG | 0.493910 | 3_1:+83807712 | None:intergenic |
| GCAGACCCATCAGCTGGTTG+TGG | 0.495061 | 3_1:+83809813 | None:intergenic |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3_1:-83811655 | Msa0381590:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3_1:+83810011 | None:intergenic |
| TCACAGTCACCTAGCCCAGC+AGG | 0.505105 | 3_1:-83807771 | Msa0381590:CDS |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3_1:+83811222 | None:intergenic |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3_1:-83809842 | Msa0381590:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3_1:+83807938 | None:intergenic |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3_1:-83808043 | Msa0381590:intron |
| TTGAGGAGTTTCTTGTTGGT+TGG | 0.513013 | 3_1:+83807920 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3_1:-83807861 | Msa0381590:CDS |
| CACGATGTGCTACTGAGACT+TGG | 0.516654 | 3_1:+83813152 | None:intergenic |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3_1:+83811177 | None:intergenic |
| ATCTGCTTGTGATCCATAGT+TGG | 0.518728 | 3_1:+83807992 | None:intergenic |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3_1:+83812907 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3_1:-83812788 | Msa0381590:CDS |
| GTTGGCCTTATAATCGGTAA+AGG | 0.521991 | 3_1:-83811481 | Msa0381590:CDS |
| CCAGTTGGCGGAATATCCAC+CGG | 0.522965 | 3_1:+83809935 | None:intergenic |
| CAAGGTGGCCAGCCTAGCTA+TGG | 0.524469 | 3_1:-83807624 | Msa0381590:CDS |
| TCAGCAGAAGAAACAGCGTC+AGG | 0.524572 | 3_1:+83812635 | None:intergenic |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3_1:+83807881 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3_1:+83807950 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3_1:-83807669 | Msa0381590:CDS |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3_1:+83813007 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3_1:-83810081 | Msa0381590:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.531625 | 3_1:-83810037 | Msa0381590:CDS |
| GCTCTATGAGTGCCTAACTC+TGG | 0.531849 | 3_1:+83807690 | None:intergenic |
| AGTCGATTGGTCCCAGTTGG+CGG | 0.531961 | 3_1:+83809923 | None:intergenic |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3_1:+83809948 | None:intergenic |
| GTCAGCATATCCCTCTAGCC+AGG | 0.533284 | 3_1:-83807736 | Msa0381590:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3_1:+83810078 | None:intergenic |
| GGTGGAGTCTGGCCATAGCT+AGG | 0.535763 | 3_1:+83807612 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3_1:-83812767 | Msa0381590:CDS |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3_1:-83811668 | Msa0381590:CDS |
| GGATATGCTCAGCCAGAGTT+AGG | 0.536855 | 3_1:-83807702 | Msa0381590:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3_1:+83810071 | None:intergenic |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3_1:-83811679 | Msa0381590:intron |
| GCTGCTCCTGCACAACAAGC+TGG | 0.542982 | 3_1:-83810050 | Msa0381590:CDS |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3_1:-83808044 | Msa0381590:intron |
| CATAGAGCACCAGTGCAACC+AGG | 0.543863 | 3_1:-83807675 | Msa0381590:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3_1:-83809975 | Msa0381590:CDS |
| AGAGTATGCAAGCTTCTACC+GGG | 0.546430 | 3_1:-83811444 | Msa0381590:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3_1:+83807955 | None:intergenic |
| GACCCATCAGCTGGTTGTGG+AGG | 0.546901 | 3_1:+83809816 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3_1:-83812944 | Msa0381590:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3_1:+83811221 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3_1:-83812679 | Msa0381590:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3_1:+83809963 | None:intergenic |
| TAAGCAGGTGGATTTGCACT+TGG | 0.550457 | 3_1:+83807801 | None:intergenic |
| TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | 3_1:-83807535 | Msa0381590:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3_1:+83809972 | None:intergenic |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3_1:+83807666 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3_1:-83809954 | Msa0381590:CDS |
| AGTGGGTTGGGAAGTTTGGG+AGG | 0.555622 | 3_1:+83807968 | None:intergenic |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3_1:-83812793 | Msa0381590:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3_1:-83812896 | Msa0381590:CDS |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3_1:-83811148 | Msa0381590:CDS |
| CCACAGTCTGGTTATGGACC+TGG | 0.560474 | 3_1:-83807849 | Msa0381590:CDS |
| CGGTGGATATTCCGCCAACT+GGG | 0.563001 | 3_1:-83809934 | Msa0381590:CDS |
| GAGGGAGGAGCACCATAACC+AGG | 0.563328 | 3_1:+83807831 | None:intergenic |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3_1:-83810128 | Msa0381590:CDS |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3_1:+83807546 | None:intergenic |
| CACTTGCATGAGTAGACTGC+TGG | 0.572808 | 3_1:+83809889 | None:intergenic |
| TAAGAATCAAACCCCGATTG+TGG | 0.574402 | 3_1:+83812869 | None:intergenic |
| TAGCTAGGCTGGCCACCTTG+AGG | 0.574664 | 3_1:+83807627 | None:intergenic |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3_1:+83812925 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3_1:+83807951 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3_1:-83810136 | Msa0381590:CDS |
| GGGAGTAATCCAACCCAAGA+GGG | 0.576300 | 3_1:-83808023 | Msa0381590:CDS |
| ACTGACCATAGCCTCCTGCT+GGG | 0.577432 | 3_1:+83807757 | None:intergenic |
| GGCTGAGCATATCCAGAAGG+CGG | 0.579823 | 3_1:+83807711 | None:intergenic |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3_1:-83807549 | Msa0381590:CDS |
| GGCATGTTATACTGCGGTGA+TGG | 0.581623 | 3_1:+83809993 | None:intergenic |
| CAATCATATGGTGCTCCTCA+AGG | 0.582124 | 3_1:-83807642 | Msa0381590:CDS |
| GAATATCCACCGGGTTGCTG+AGG | 0.583120 | 3_1:+83809945 | None:intergenic |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.584276 | 3_1:+83809897 | None:intergenic |
| GCTACCCCATAACCTGGTTG+AGG | 0.585519 | 3_1:+83807903 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3_1:-83812792 | Msa0381590:CDS |
| AGCAGTCGATTGGTCCCAGT+TGG | 0.586343 | 3_1:+83809920 | None:intergenic |
| CTGTATGCAGACCCATCAGC+TGG | 0.587306 | 3_1:+83809807 | None:intergenic |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3_1:-83810017 | Msa0381590:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3_1:-83811651 | Msa0381590:CDS |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3_1:-83807951 | Msa0381590:CDS |
| AACTCCTCAACCAGGTTATG+GGG | 0.596098 | 3_1:-83807907 | Msa0381590:CDS |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3_1:+83812914 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3_1:-83811636 | Msa0381590:CDS |
| AGTGAAAACACGATGTGTGA+AGG | 0.602428 | 3_1:+83813108 | None:intergenic |
| TGTTGTGCAGGAGCAGCAGG+AGG | 0.605854 | 3_1:+83810056 | None:intergenic |
| GACTGTGATTGACCATAAGC+AGG | 0.606917 | 3_1:+83807786 | None:intergenic |
| GAAAACCTGAATTCGTGCCC+CGG | 0.608473 | 3_1:+83811426 | None:intergenic |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3_1:-83812675 | Msa0381590:CDS |
| CAGTTGGCGGAATATCCACC+GGG | 0.609806 | 3_1:+83809936 | None:intergenic |
| GGTGAGATGGAGCAGTCGAT+TGG | 0.609946 | 3_1:+83809910 | None:intergenic |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3_1:+83812836 | None:intergenic |
| GAGTATGCAAGCTTCTACCG+GGG | 0.611864 | 3_1:-83811443 | Msa0381590:CDS |
| TAAGAACTATTTCCATATGA+CGG | 0.615919 | 3_1:+83807591 | None:intergenic |
| CATCAATGAAGTCCTTGCTG+AGG | 0.616712 | 3_1:-83812606 | Msa0381590:intron |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3_1:+83812917 | None:intergenic |
| GTAGGGGCTACCCCATAACC+TGG | 0.621045 | 3_1:+83807897 | None:intergenic |
| CAGCAGTCTACTCATGCAAG+TGG | 0.623206 | 3_1:-83809888 | Msa0381590:CDS |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3_1:+83810074 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3_1:+83807863 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3_1:-83811143 | Msa0381590:intron |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3_1:+83811223 | None:intergenic |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3_1:+83807875 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3_1:+83809966 | None:intergenic |
| TATAGGGTTTGTTTCAATGG+CGG | 0.632326 | 3_1:-83813074 | Msa0381590:exon |
| TATGATTGCGGACCATACCC+TGG | 0.632611 | 3_1:+83807657 | None:intergenic |
| GGCCTTATAATCGGTAAAGG+AGG | 0.635849 | 3_1:-83811478 | Msa0381590:CDS |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3_1:+83813000 | None:intergenic |
| TCAGGTGGTTATACTCAGCA+AGG | 0.636998 | 3_1:-83810110 | Msa0381590:CDS |
| CAACAAGAAACTCCTCAACC+AGG | 0.638274 | 3_1:-83807915 | Msa0381590:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3_1:-83811678 | Msa0381590:intron |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3_1:-83813017 | Msa0381590:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3_1:-83812839 | Msa0381590:CDS |
| ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | 3_1:-83807522 | Msa0381590:CDS |
| CTGAGCATATCCAGAAGGCG+GGG | 0.654248 | 3_1:+83807713 | None:intergenic |
| TCTGGCTGAGCATATCCAGA+AGG | 0.655491 | 3_1:+83807708 | None:intergenic |
| ATAGAGCACCAGTGCAACCA+GGG | 0.660833 | 3_1:-83807674 | Msa0381590:CDS |
| AGAAATTCAGGGAACTCAGG+TGG | 0.665666 | 3_1:-83810125 | Msa0381590:CDS |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3_1:-83811635 | Msa0381590:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3_1:-83809841 | Msa0381590:CDS |
| TGAGGAGCACCATATGATTG+CGG | 0.676376 | 3_1:+83807645 | None:intergenic |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3_1:+83813003 | None:intergenic |
| CAGTCACCTAGCCCAGCAGG+AGG | 0.679822 | 3_1:-83807768 | Msa0381590:CDS |
| TGGGAGTAATCCAACCCAAG+AGG | 0.681350 | 3_1:-83808024 | Msa0381590:CDS |
| ATAACGGTGCTCCACAATCG+GGG | 0.686584 | 3_1:-83812880 | Msa0381590:CDS |
| GGAGTAATCCAACCCAAGAG+GGG | 0.687207 | 3_1:-83808022 | Msa0381590:CDS |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3_1:-83812836 | Msa0381590:CDS |
| ACTTTAGCAACACTGCCCTG+TGG | 0.699397 | 3_1:+83807507 | None:intergenic |
| TCATATGGTGCTCCTCAAGG+TGG | 0.706407 | 3_1:-83807639 | Msa0381590:CDS |
| GAACTATTTCCATATGACGG+TGG | 0.711749 | 3_1:+83807594 | None:intergenic |
| TGTGATTGACCATAAGCAGG+TGG | 0.719303 | 3_1:+83807789 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3_1:-83809951 | Msa0381590:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3_1:+83812946 | None:intergenic |
| CCAGGTCCATAACCAGACTG+TGG | 0.734270 | 3_1:+83807849 | None:intergenic |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3_1:-83809840 | Msa0381590:CDS |
| GGTAGCCCCTACCTCCCAAG+CGG | 0.739424 | 3_1:-83807886 | Msa0381590:CDS |
| GGCTGAGGCATGTTATACTG+CGG | 0.750903 | 3_1:+83809987 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3_1:+83811134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATGACTAATTTTTAT+TGG | - | chr3_1:83810355-83810374 | Msa0381590:intron | 10.0% |
| !!! | TTTTTTTATACTCTTGTTTA+CGG | - | chr3_1:83808061-83808080 | Msa0381590:intron | 15.0% |
| !! | ATATTGGTAAAAAGTTAAAA+CGG | + | chr3_1:83809364-83809383 | None:intergenic | 15.0% |
| !!! | AATTTTAAACTTAAGAGATT+TGG | + | chr3_1:83809581-83809600 | None:intergenic | 15.0% |
| !!! | ATCTCTTAAGTTTAAAATTA+TGG | - | chr3_1:83809582-83809601 | Msa0381590:intron | 15.0% |
| !!! | TCTCTTAAGTTTAAAATTAT+GGG | - | chr3_1:83809583-83809602 | Msa0381590:intron | 15.0% |
| !!! | TTATAATCATGTTTAGTTTT+AGG | - | chr3_1:83809607-83809626 | Msa0381590:intron | 15.0% |
| !! | ACAATTACCTTATAAAATTA+TGG | - | chr3_1:83809652-83809671 | Msa0381590:intron | 15.0% |
| !!! | AAATGAATAACAATTTTGTA+GGG | + | chr3_1:83809694-83809713 | None:intergenic | 15.0% |
| !!! | AAAATGAATAACAATTTTGT+AGG | + | chr3_1:83809695-83809714 | None:intergenic | 15.0% |
| !! | TTAAAATATTTCTTATCGTT+GGG | - | chr3_1:83810011-83810030 | Msa0381590:CDS | 15.0% |
| !! | GAATTCAAAATAATTCAATT+AGG | - | chr3_1:83811128-83811147 | Msa0381590:intron | 15.0% |
| !! | GAATTCAAAATAATTCAATT+AGG | - | chr3_1:83811128-83811147 | Msa0381590:intron | 15.0% |
| !! | TAATCAATGATATTTCACTA+AGG | + | chr3_1:83808255-83808274 | None:intergenic | 20.0% |
| !!! | TGAAATACATTTTTACTAAC+AGG | + | chr3_1:83808748-83808767 | None:intergenic | 20.0% |
| !! | TATATTATAGTTACAGAATC+AGG | + | chr3_1:83808855-83808874 | None:intergenic | 20.0% |
| !! | AAAGAACATTAAAAATCGAT+GGG | - | chr3_1:83809439-83809458 | Msa0381590:intron | 20.0% |
| !!! | CACAATTTTTTTGTTTTATC+TGG | - | chr3_1:83809531-83809550 | Msa0381590:intron | 20.0% |
| !!! | AAAAGGTCCATAATTTTATA+AGG | + | chr3_1:83809662-83809681 | None:intergenic | 20.0% |
| !! | CTTAAAATATTTCTTATCGT+TGG | - | chr3_1:83810010-83810029 | Msa0381590:CDS | 20.0% |
| !!! | AAAGTCACTTTCAATTATAA+TGG | - | chr3_1:83810134-83810153 | Msa0381590:CDS | 20.0% |
| !!! | CTTCGTATATTTTTATGTTT+TGG | - | chr3_1:83810436-83810455 | Msa0381590:intron | 20.0% |
| !! | AATTCAATTAGGAATCTTAT+TGG | - | chr3_1:83811139-83811158 | Msa0381590:intron | 20.0% |
| !!! | CTTTTGTTTCTCTTTAATTT+GGG | - | chr3_1:83811266-83811285 | Msa0381590:intron | 20.0% |
| !! | TATAAACTATCACAATTTAC+TGG | - | chr3_1:83811369-83811388 | Msa0381590:intron | 20.0% |
| !! | ATAAACTATCACAATTTACT+GGG | - | chr3_1:83811370-83811389 | Msa0381590:intron | 20.0% |
| !! | CAAATATAAAACTTTGTATG+TGG | - | chr3_1:83811968-83811987 | Msa0381590:intron | 20.0% |
| !! | AATTCAATTAGGAATCTTAT+TGG | - | chr3_1:83811139-83811158 | Msa0381590:intron | 20.0% |
| ! | AAGAAGATTGAAATACCTAA+TGG | - | chr3_1:83807843-83807862 | Msa0381590:CDS | 25.0% |
| ! | TAAAAAAAAAAACCTCAGCA+AGG | + | chr3_1:83808049-83808068 | None:intergenic | 25.0% |
| ! | GTGATTTCAAAACATGAATT+GGG | + | chr3_1:83808221-83808240 | None:intergenic | 25.0% |
| ! | TACTCAAATGATGTTCAAAT+TGG | - | chr3_1:83808366-83808385 | Msa0381590:intron | 25.0% |
| ! | TAAATATGCTCAAATGATGT+TGG | - | chr3_1:83808889-83808908 | Msa0381590:intron | 25.0% |
| !!! | ATACGTGTTGTTTATTAACT+AGG | - | chr3_1:83808950-83808969 | Msa0381590:intron | 25.0% |
| !!! | TGTTTTGTTTATTCTCGTTT+GGG | - | chr3_1:83809107-83809126 | Msa0381590:intron | 25.0% |
| ! | GAAAGAACATTAAAAATCGA+TGG | - | chr3_1:83809438-83809457 | Msa0381590:intron | 25.0% |
| !!! | TTTATCTGGCTTATCATTTT+TGG | - | chr3_1:83809545-83809564 | Msa0381590:intron | 25.0% |
| ! | TCAACAAGTCAAAATTCAAA+AGG | + | chr3_1:83809842-83809861 | None:intergenic | 25.0% |
| !!! | ATTTCATAGTTTGTTTAAGC+TGG | - | chr3_1:83810185-83810204 | Msa0381590:intron | 25.0% |
| !! | CTAATTTTTATTGGCATCAA+TGG | - | chr3_1:83810364-83810383 | Msa0381590:intron | 25.0% |
| ! | AATAGATGTACACATATAAC+GGG | + | chr3_1:83810415-83810434 | None:intergenic | 25.0% |
| ! | CAATAGATGTACACATATAA+CGG | + | chr3_1:83810416-83810435 | None:intergenic | 25.0% |
| !!! | ATTTTTATGTTTTGGTACGT+TGG | - | chr3_1:83810444-83810463 | Msa0381590:intron | 25.0% |
| !!! | TTTTTATGTTTTGGTACGTT+GGG | - | chr3_1:83810445-83810464 | Msa0381590:intron | 25.0% |
| !!! | TGCAGTAATTTGTATTGATT+AGG | - | chr3_1:83811039-83811058 | Msa0381590:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | chr3_1:83811044-83811063 | Msa0381590:intron | 25.0% |
| !!! | GCCTTATTTATACAAACAAA+GGG | + | chr3_1:83811086-83811105 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAAGGCCATT+TGG | - | chr3_1:83811090-83811109 | Msa0381590:intron | 25.0% |
| !!! | ATTAGGAATCTTATTGGTTT+TGG | - | chr3_1:83811145-83811164 | Msa0381590:CDS | 25.0% |
| !!! | TTAGGAATCTTATTGGTTTT+GGG | - | chr3_1:83811146-83811165 | Msa0381590:CDS | 25.0% |
| ! | CCAAATTAAAGAGAAACAAA+AGG | + | chr3_1:83811268-83811287 | None:intergenic | 25.0% |
| !!! | CCTTTTGTTTCTCTTTAATT+TGG | - | chr3_1:83811265-83811284 | Msa0381590:intron | 25.0% |
| !!! | CATTGTTGTGGTTTTATTAT+TGG | - | chr3_1:83811502-83811521 | Msa0381590:intron | 25.0% |
| ! | ATGGCTATGATTAAAGAATT+TGG | - | chr3_1:83811564-83811583 | Msa0381590:intron | 25.0% |
| !!! | TGCAGTAATTTGTATTGATT+AGG | - | chr3_1:83811039-83811058 | Msa0381590:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | chr3_1:83811044-83811063 | Msa0381590:intron | 25.0% |
| !!! | GCCTTATTTATACAAACAAA+GGG | + | chr3_1:83811086-83811105 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAAGGCCATT+TGG | - | chr3_1:83811090-83811109 | Msa0381590:intron | 25.0% |
| !!! | ATTAGGAATCTTATTGGTTT+TGG | - | chr3_1:83811145-83811164 | Msa0381590:CDS | 25.0% |
| !!! | TTAGGAATCTTATTGGTTTT+GGG | - | chr3_1:83811146-83811165 | Msa0381590:CDS | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3_1:83813052-83813071 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3_1:83813052-83813071 | Msa0381590:CDS | 25.0% |
| TTCACTTTCTTCTTCTCTAT+AGG | - | chr3_1:83807549-83807568 | Msa0381590:CDS | 30.0% | |
| TCACTTTCTTCTTCTCTATA+GGG | - | chr3_1:83807550-83807569 | Msa0381590:CDS | 30.0% | |
| AGATTGAAATACCTAATGGT+AGG | - | chr3_1:83807847-83807866 | Msa0381590:CDS | 30.0% | |
| GATTGAAATACCTAATGGTA+GGG | - | chr3_1:83807848-83807867 | Msa0381590:CDS | 30.0% | |
| TACTGTAATTCTTACTAGTC+AGG | - | chr3_1:83808116-83808135 | Msa0381590:intron | 30.0% | |
| ACTGTAATTCTTACTAGTCA+GGG | - | chr3_1:83808117-83808136 | Msa0381590:intron | 30.0% | |
| GGTGATTTCAAAACATGAAT+TGG | + | chr3_1:83808222-83808241 | None:intergenic | 30.0% | |
| TTTCACTAAGGTAACAGTTA+CGG | + | chr3_1:83808243-83808262 | None:intergenic | 30.0% | |
| ! | CTGATTTGATAACTGTTGTA+TGG | - | chr3_1:83808288-83808307 | Msa0381590:intron | 30.0% |
| CTCAAATGATGTTTCAATGA+CGG | - | chr3_1:83808464-83808483 | Msa0381590:intron | 30.0% | |
| TCTAATCTTGCACAATTTCA+TGG | - | chr3_1:83808582-83808601 | Msa0381590:intron | 30.0% | |
| TTGGTGAAACATTCACTAAT+AGG | - | chr3_1:83808637-83808656 | Msa0381590:intron | 30.0% | |
| GATGCAAATACCAAACAATA+AGG | - | chr3_1:83809040-83809059 | Msa0381590:intron | 30.0% | |
| AAATACCAAACAATAAGGTG+TGG | - | chr3_1:83809045-83809064 | Msa0381590:intron | 30.0% | |
| AATACCAAACAATAAGGTGT+GGG | - | chr3_1:83809046-83809065 | Msa0381590:intron | 30.0% | |
| !!! | GTGTTTTGTTTATTCTCGTT+TGG | - | chr3_1:83809106-83809125 | Msa0381590:intron | 30.0% |
| GGTAAAAAGTTAAAACGGAT+AGG | + | chr3_1:83809359-83809378 | None:intergenic | 30.0% | |
| CCTGAAAAAATTGACGATAT+TGG | + | chr3_1:83809380-83809399 | None:intergenic | 30.0% | |
| !!! | CCAATATCGTCAATTTTTTC+AGG | - | chr3_1:83809377-83809396 | Msa0381590:intron | 30.0% |
| !! | TTGCTGATTCAATTTGATCA+GGG | + | chr3_1:83809467-83809486 | None:intergenic | 30.0% |
| !! | TTTGCTGATTCAATTTGATC+AGG | + | chr3_1:83809468-83809487 | None:intergenic | 30.0% |
| AATTGAATCAGCAAAGCAAT+TGG | - | chr3_1:83809473-83809492 | Msa0381590:intron | 30.0% | |
| ! | CTCCACCTTTTGTAAAAATA+AGG | - | chr3_1:83809720-83809739 | Msa0381590:intron | 30.0% |
| !!! | CACCTTATTTTTACAAAAGG+TGG | + | chr3_1:83809725-83809744 | None:intergenic | 30.0% |
| !!! | GAGCACCTTATTTTTACAAA+AGG | + | chr3_1:83809728-83809747 | None:intergenic | 30.0% |
| TGAGTTATCATGGTTTCATT+TGG | + | chr3_1:83809779-83809798 | None:intergenic | 30.0% | |
| !!! | CAAAGTGCTGTCTAATTTTA+TGG | + | chr3_1:83809878-83809897 | None:intergenic | 30.0% |
| TCATATGCTCAACTTTCATT+CGG | - | chr3_1:83810034-83810053 | Msa0381590:CDS | 30.0% | |
| !!! | ATTCGGTTTAGTTTTATCCT+TGG | - | chr3_1:83810051-83810070 | Msa0381590:CDS | 30.0% |
| !!! | TTCGGTTTAGTTTTATCCTT+GGG | - | chr3_1:83810052-83810071 | Msa0381590:CDS | 30.0% |
| ATTGAAAGTGACTTTAACGT+AGG | + | chr3_1:83810129-83810148 | None:intergenic | 30.0% | |
| AGGATTGTTTCAATGTACTT+GGG | - | chr3_1:83810238-83810257 | Msa0381590:intron | 30.0% | |
| ! | GCCCTTTGTTTGTATAAATA+AGG | - | chr3_1:83811082-83811101 | Msa0381590:intron | 30.0% |
| !! | GGCCTTATTTATACAAACAA+AGG | + | chr3_1:83811087-83811106 | None:intergenic | 30.0% |
| ! | TAATTTGGGTTCCTATCAAT+TGG | - | chr3_1:83811280-83811299 | Msa0381590:intron | 30.0% |
| GTACTCAACAGATAAACAAA+TGG | - | chr3_1:83811599-83811618 | Msa0381590:intron | 30.0% | |
| TCCTTTCTTTCAAATTCAGA+GGG | + | chr3_1:83811944-83811963 | None:intergenic | 30.0% | |
| ATAAAACTTTGTATGTGGCT+TGG | - | chr3_1:83811973-83811992 | Msa0381590:intron | 30.0% | |
| ! | GCCCTTTGTTTGTATAAATA+AGG | - | chr3_1:83811082-83811101 | Msa0381590:intron | 30.0% |
| !! | GGCCTTATTTATACAAACAA+AGG | + | chr3_1:83811087-83811106 | None:intergenic | 30.0% |
| ATGTGTGAAGGAATTGGATT+AGG | + | chr3_1:83807523-83807542 | None:intergenic | 35.0% | |
| ! | CTCTATAGGGTTTGTTTCAA+TGG | - | chr3_1:83807563-83807582 | Msa0381590:CDS | 35.0% |
| ! | TATAGGGTTTGTTTCAATGG+CGG | - | chr3_1:83807566-83807585 | Msa0381590:CDS | 35.0% |
| ! | TTCATCGTACTTGCGTTTTA+GGG | + | chr3_1:83807610-83807629 | None:intergenic | 35.0% |
| ! | GTTGGTGTTCTTATTGGTAA+AGG | - | chr3_1:83807870-83807889 | Msa0381590:CDS | 35.0% |
| AAGTATCTTCAGATGCAATC+TGG | - | chr3_1:83807906-83807925 | Msa0381590:CDS | 35.0% | |
| ! | GATTCAAGTTACTCGTGATA+TGG | - | chr3_1:83807935-83807954 | Msa0381590:CDS | 35.0% |
| ACTAGGATGGTTGAACTTAT+GGG | - | chr3_1:83807978-83807997 | Msa0381590:CDS | 35.0% | |
| CTGTTGTATGGAGTTTCAAT+AGG | - | chr3_1:83808300-83808319 | Msa0381590:intron | 35.0% | |
| CAGTCAGATACAACAAAATC+AGG | + | chr3_1:83808403-83808422 | None:intergenic | 35.0% | |
| TGATGTTTCAATGACGGTAA+AGG | - | chr3_1:83808470-83808489 | Msa0381590:intron | 35.0% | |
| ATGACTGTAACTTTACCTCT+TGG | - | chr3_1:83808618-83808637 | Msa0381590:intron | 35.0% | |
| TTAGTGAATGTTTCACCAAG+AGG | + | chr3_1:83808636-83808655 | None:intergenic | 35.0% | |
| TGCTCAAATGATGTTGGAAT+TGG | - | chr3_1:83808895-83808914 | Msa0381590:intron | 35.0% | |
| TTTATTAACTAGGCTGAAGC+TGG | - | chr3_1:83808960-83808979 | Msa0381590:intron | 35.0% | |
| TTATTAACTAGGCTGAAGCT+GGG | - | chr3_1:83808961-83808980 | Msa0381590:intron | 35.0% | |
| ATACCAAACAATAAGGTGTG+GGG | - | chr3_1:83809047-83809066 | Msa0381590:intron | 35.0% | |
| GGTTTCTTGTGTGAATCTTT+AGG | - | chr3_1:83809137-83809156 | Msa0381590:intron | 35.0% | |
| TCTTGTGTGAATCTTTAGGT+TGG | - | chr3_1:83809141-83809160 | Msa0381590:intron | 35.0% | |
| !! | CTTTAGGTTGGCCTTATAAT+CGG | - | chr3_1:83809153-83809172 | Msa0381590:intron | 35.0% |
| TTTCTGTTGATGTATCACCT+GGG | + | chr3_1:83809422-83809441 | None:intergenic | 35.0% | |
| !! | TGCTGATTCAATTTGATCAG+GGG | + | chr3_1:83809466-83809485 | None:intergenic | 35.0% |
| TTGGTTAATCAAATCCTCAC+TGG | - | chr3_1:83809492-83809511 | Msa0381590:intron | 35.0% | |
| !!! | TCTGGCTTATCATTTTTGGT+TGG | - | chr3_1:83809549-83809568 | Msa0381590:intron | 35.0% |
| TTGTAGGGACTAAAGTCAAA+AGG | + | chr3_1:83809679-83809698 | None:intergenic | 35.0% | |
| !! | AGGTGCTCATATTTTTACAG+TGG | - | chr3_1:83809740-83809759 | Msa0381590:intron | 35.0% |
| CAAACAAAATCTAACAGCCA+GGG | + | chr3_1:83809932-83809951 | None:intergenic | 35.0% | |
| TCAAACAAAATCTAACAGCC+AGG | + | chr3_1:83809933-83809952 | None:intergenic | 35.0% | |
| AATCGACAGAAACACACAAA+TGG | + | chr3_1:83809973-83809992 | None:intergenic | 35.0% | |
| GAGGATTGTTTCAATGTACT+TGG | - | chr3_1:83810237-83810256 | Msa0381590:intron | 35.0% | |
| GGATTGTTTCAATGTACTTG+GGG | - | chr3_1:83810239-83810258 | Msa0381590:intron | 35.0% | |
| TGAAGTACGGTCTGTATATT+TGG | - | chr3_1:83810267-83810286 | Msa0381590:intron | 35.0% | |
| TTTCCCATACTTGCTCTTTA+GGG | - | chr3_1:83810296-83810315 | Msa0381590:intron | 35.0% | |
| TATTGGCATCAATGGAAATG+AGG | - | chr3_1:83810372-83810391 | Msa0381590:intron | 35.0% | |
| AGAATCGTCTCAGAAATTCA+GGG | - | chr3_1:83810504-83810523 | Msa0381590:intron | 35.0% | |
| !! | TGTGTTGATTAGAAGCAGTT+AGG | - | chr3_1:83811009-83811028 | Msa0381590:intron | 35.0% |
| ! | AGAGAAATGTCTTTTCTCTG+AGG | - | chr3_1:83811174-83811193 | Msa0381590:CDS | 35.0% |
| ACTATCACAATTTACTGGGA+CGG | - | chr3_1:83811374-83811393 | Msa0381590:intron | 35.0% | |
| !! | TGACTGGAAGTCATTTTCTA+TGG | - | chr3_1:83811545-83811564 | Msa0381590:intron | 35.0% |
| ! | TAAAGAATTTGGAGCACAGA+TGG | - | chr3_1:83811575-83811594 | Msa0381590:intron | 35.0% |
| AAGAATCAGAACCAAAACTG+TGG | - | chr3_1:83811637-83811656 | Msa0381590:CDS | 35.0% | |
| ACAGAAAAACATGATGAACC+AGG | - | chr3_1:83811666-83811685 | Msa0381590:CDS | 35.0% | |
| CAATGAAATTTCACCTTCGT+CGG | - | chr3_1:83811728-83811747 | Msa0381590:intron | 35.0% | |
| AAAGGTTGTTGATGCAGAAA+TGG | - | chr3_1:83811752-83811771 | Msa0381590:intron | 35.0% | |
| AGTCGCAAGGATAATAGAAT+TGG | - | chr3_1:83811795-83811814 | Msa0381590:intron | 35.0% | |
| GTCGCAAGGATAATAGAATT+GGG | - | chr3_1:83811796-83811815 | Msa0381590:intron | 35.0% | |
| TCGCAAGGATAATAGAATTG+GGG | - | chr3_1:83811797-83811816 | Msa0381590:intron | 35.0% | |
| !! | GAAAGAGTATTGAACGAGAA+AGG | - | chr3_1:83811819-83811838 | Msa0381590:intron | 35.0% |
| TCTTTCAAATTCAGAGGGAA+TGG | + | chr3_1:83811939-83811958 | None:intergenic | 35.0% | |
| TCCCTCTGAATTTGAAAGAA+AGG | - | chr3_1:83811940-83811959 | Msa0381590:intron | 35.0% | |
| CTCCTTTCTTTCAAATTCAG+AGG | + | chr3_1:83811945-83811964 | None:intergenic | 35.0% | |
| !! | TGTGTTGATTAGAAGCAGTT+AGG | - | chr3_1:83811009-83811028 | Msa0381590:intron | 35.0% |
| ! | AGAGAAATGTCTTTTCTCTG+AGG | - | chr3_1:83811174-83811193 | Msa0381590:CDS | 35.0% |
| TATAATGCGCAACAACAATC+TGG | - | chr3_1:83812530-83812549 | Msa0381590:intron | 35.0% | |
| ATAATGCGCAACAACAATCT+GGG | - | chr3_1:83812531-83812550 | Msa0381590:intron | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3_1:83812566-83812585 | None:intergenic | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3_1:83812566-83812585 | Msa0381590:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3_1:83812572-83812591 | Msa0381590:intron | 35.0% | |
| AACACGATGTGTGAAGGAAT+TGG | + | chr3_1:83807529-83807548 | None:intergenic | 40.0% | |
| AGTGAAAACACGATGTGTGA+AGG | + | chr3_1:83807535-83807554 | None:intergenic | 40.0% | |
| ! | GTTCATCGTACTTGCGTTTT+AGG | + | chr3_1:83807611-83807630 | None:intergenic | 40.0% |
| AACTTCTTGAGCTCGTTGTT+TGG | + | chr3_1:83807673-83807692 | None:intergenic | 40.0% | |
| ! | TTATCGGACTTGGTTCGTTT+GGG | + | chr3_1:83807744-83807763 | None:intergenic | 40.0% |
| AAACGAACCAAGTCCGATAA+CGG | - | chr3_1:83807744-83807763 | Msa0381590:CDS | 40.0% | |
| TAAGAATCAAACCCCGATTG+TGG | + | chr3_1:83807774-83807793 | None:intergenic | 40.0% | |
| GAAATACCTAATGGTAGGGT+TGG | - | chr3_1:83807852-83807871 | Msa0381590:CDS | 40.0% | |
| GGTGTTCTTATTGGTAAAGG+AGG | - | chr3_1:83807873-83807892 | Msa0381590:CDS | 40.0% | |
| CTGATCCTAATTCTCAGACT+AGG | - | chr3_1:83807961-83807980 | Msa0381590:CDS | 40.0% | |
| TCCTAATTCTCAGACTAGGA+TGG | - | chr3_1:83807965-83807984 | Msa0381590:CDS | 40.0% | |
| ACCATCCTAGTCTGAGAATT+AGG | + | chr3_1:83807969-83807988 | None:intergenic | 40.0% | |
| GACTAGGATGGTTGAACTTA+TGG | - | chr3_1:83807977-83807996 | Msa0381590:CDS | 40.0% | |
| TATTAACTAGGCTGAAGCTG+GGG | - | chr3_1:83808962-83808981 | Msa0381590:intron | 40.0% | |
| GAGAAAATATATCCAGCTGC+AGG | - | chr3_1:83809069-83809088 | Msa0381590:intron | 40.0% | |
| ! | TATTCTCGTTTGGGTTCATG+TGG | - | chr3_1:83809116-83809135 | Msa0381590:intron | 40.0% |
| !! | GTTGGCCTTATAATCGGTAA+AGG | - | chr3_1:83809159-83809178 | Msa0381590:intron | 40.0% |
| ! | CTCCTCCTTTACCGATTATA+AGG | + | chr3_1:83809167-83809186 | None:intergenic | 40.0% |
| ! | AAGAGTATGCAAGCTTCTAC+CGG | - | chr3_1:83809195-83809214 | Msa0381590:intron | 40.0% |
| AAATCCAAGTCATGAGAGTC+GGG | + | chr3_1:83809336-83809355 | None:intergenic | 40.0% | |
| GAAATCCAAGTCATGAGAGT+CGG | + | chr3_1:83809337-83809356 | None:intergenic | 40.0% | |
| TTCTGTTGATGTATCACCTG+GGG | + | chr3_1:83809421-83809440 | None:intergenic | 40.0% | |
| CTTTCTGTTGATGTATCACC+TGG | + | chr3_1:83809423-83809442 | None:intergenic | 40.0% | |
| TAATCAAATCCTCACTGGTG+AGG | - | chr3_1:83809497-83809516 | Msa0381590:intron | 40.0% | |
| GAAACCATGATAACTCAGAC+TGG | - | chr3_1:83809782-83809801 | Msa0381590:intron | 40.0% | |
| ATGTCTCTATTTATGTGCCC+TGG | - | chr3_1:83809912-83809931 | Msa0381590:CDS | 40.0% | |
| ! | TTTAAGCTGGCCTGTTAGAT+TGG | - | chr3_1:83810198-83810217 | Msa0381590:intron | 40.0% |
| ! | TTAAGCTGGCCTGTTAGATT+GGG | - | chr3_1:83810199-83810218 | Msa0381590:intron | 40.0% |
| GTTTCCCATACTTGCTCTTT+AGG | - | chr3_1:83810295-83810314 | Msa0381590:intron | 40.0% | |
| ACTCCCTAAAGAGCAAGTAT+GGG | + | chr3_1:83810302-83810321 | None:intergenic | 40.0% | |
| TACTCCCTAAAGAGCAAGTA+TGG | + | chr3_1:83810303-83810322 | None:intergenic | 40.0% | |
| !!! | GGGCGAGCATTTTTAATTTG+TGG | - | chr3_1:83810465-83810484 | Msa0381590:intron | 40.0% |
| CAGAATCGTCTCAGAAATTC+AGG | - | chr3_1:83810503-83810522 | Msa0381590:intron | 40.0% | |
| AACAAGCTGGTTATGGCTAT+GGG | - | chr3_1:83810603-83810622 | Msa0381590:intron | 40.0% | |
| CAGGGTTATTGTTAGGTATC+TGG | - | chr3_1:83810896-83810915 | Msa0381590:intron | 40.0% | |
| GGTTATTGTTAGGTATCTGG+TGG | - | chr3_1:83810899-83810918 | Msa0381590:intron | 40.0% | |
| !! | AGGTATCTGGTGGTATTGAT+AGG | - | chr3_1:83810909-83810928 | Msa0381590:intron | 40.0% |
| !! | GGTATCTGGTGGTATTGATA+GGG | - | chr3_1:83810910-83810929 | Msa0381590:intron | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | chr3_1:83811051-83811070 | Msa0381590:intron | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | - | chr3_1:83811200-83811219 | Msa0381590:CDS | 40.0% |
| GAGAAGGAAACCAGTGTTAT+CGG | - | chr3_1:83811320-83811339 | Msa0381590:intron | 40.0% | |
| TATCGGAGATGGATGGAATA+TGG | - | chr3_1:83811337-83811356 | Msa0381590:intron | 40.0% | |
| ACTCATGTGATAAGTTGCAG+TGG | - | chr3_1:83811451-83811470 | Msa0381590:CDS | 40.0% | |
| CTCATGTGATAAGTTGCAGT+GGG | - | chr3_1:83811452-83811471 | Msa0381590:CDS | 40.0% | |
| !! | AGGATGAAGAAGCATTGTTG+TGG | - | chr3_1:83811490-83811509 | Msa0381590:intron | 40.0% |
| ATGACTTCCAGTCAGCATAT+GGG | + | chr3_1:83811539-83811558 | None:intergenic | 40.0% | |
| AATGACTTCCAGTCAGCATA+TGG | + | chr3_1:83811540-83811559 | None:intergenic | 40.0% | |
| ! | TCTGTCATCTTCCACAGTTT+TGG | + | chr3_1:83811651-83811670 | None:intergenic | 40.0% |
| AATTTCACCTTCGTCGGAAA+AGG | - | chr3_1:83811734-83811753 | Msa0381590:intron | 40.0% | |
| TGAAACAAAGAAGAGTCGCA+AGG | - | chr3_1:83811782-83811801 | Msa0381590:intron | 40.0% | |
| AGAAAAAGAGAGCAAGAGTG+TGG | - | chr3_1:83811888-83811907 | Msa0381590:intron | 40.0% | |
| ! | GAAAAAGAGAGCAAGAGTGT+GGG | - | chr3_1:83811889-83811908 | Msa0381590:intron | 40.0% |
| ! | AAAAAGAGAGCAAGAGTGTG+GGG | - | chr3_1:83811890-83811909 | Msa0381590:intron | 40.0% |
| !! | TATGTGGCTTGGTTGTTTGA+AGG | - | chr3_1:83811984-83812003 | Msa0381590:intron | 40.0% |
| !! | ATGTGGCTTGGTTGTTTGAA+GGG | - | chr3_1:83811985-83812004 | Msa0381590:intron | 40.0% |
| !! | AGGTATCTGGTGGTATTGAT+AGG | - | chr3_1:83810909-83810928 | Msa0381590:intron | 40.0% |
| !! | GGTATCTGGTGGTATTGATA+GGG | - | chr3_1:83810910-83810929 | Msa0381590:intron | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | chr3_1:83811051-83811070 | Msa0381590:intron | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | - | chr3_1:83811200-83811219 | Msa0381590:CDS | 40.0% |
| CTTTCCTGACCATAACTGAT+AGG | + | chr3_1:83812500-83812519 | None:intergenic | 40.0% | |
| AGTTATGGTCAGGAAAGCTA+TGG | - | chr3_1:83812503-83812522 | Msa0381590:intron | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3_1:83812651-83812670 | None:intergenic | 40.0% | |
| TTGAGGAGTTTCTTGTTGGT+TGG | + | chr3_1:83812723-83812742 | None:intergenic | 40.0% | |
| AAACTCCTCAACCAGGTTAT+GGG | - | chr3_1:83812732-83812751 | Msa0381590:CDS | 40.0% | |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3_1:83812830-83812849 | None:intergenic | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3_1:83812831-83812850 | None:intergenic | 40.0% |
| GAACTATTTCCATATGACGG+TGG | + | chr3_1:83813049-83813068 | None:intergenic | 40.0% | |
| ! | TTATGGTGCTAGTTATGCTC+AGG | - | chr3_1:83813069-83813088 | Msa0381590:exon | 40.0% |
| ! | GTTATCGGACTTGGTTCGTT+TGG | + | chr3_1:83807745-83807764 | None:intergenic | 45.0% |
| AGAACACCAACCCTACCATT+AGG | + | chr3_1:83807861-83807880 | None:intergenic | 45.0% | |
| !! | GGTAGGGTTGGTGTTCTTAT+TGG | - | chr3_1:83807864-83807883 | Msa0381590:CDS | 45.0% |
| CATCAATGAAGTCCTTGCTG+AGG | - | chr3_1:83808034-83808053 | Msa0381590:CDS | 45.0% | |
| TCTCCCCACACCTTATTGTT+TGG | + | chr3_1:83809053-83809072 | None:intergenic | 45.0% | |
| ! | GGCCTTATAATCGGTAAAGG+AGG | - | chr3_1:83809162-83809181 | Msa0381590:intron | 45.0% |
| AGAGTATGCAAGCTTCTACC+GGG | - | chr3_1:83809196-83809215 | Msa0381590:intron | 45.0% | |
| TCTGTTGATGTATCACCTGG+GGG | + | chr3_1:83809420-83809439 | None:intergenic | 45.0% | |
| GATAACATACCTCACCAGTG+AGG | + | chr3_1:83809509-83809528 | None:intergenic | 45.0% | |
| GTCTCCAGTCTGAGTTATCA+TGG | + | chr3_1:83809789-83809808 | None:intergenic | 45.0% | |
| ! | GACAGCACTTTGAAGACTCT+TGG | - | chr3_1:83809886-83809905 | Msa0381590:CDS | 45.0% |
| TTCCCTCAACCCAATCTAAC+AGG | + | chr3_1:83810211-83810230 | None:intergenic | 45.0% | |
| !! | TGTTAGATTGGGTTGAGGGA+AGG | - | chr3_1:83810210-83810229 | Msa0381590:intron | 45.0% |
| ACTTGGGGCTTAGTGAAGTA+CGG | - | chr3_1:83810254-83810273 | Msa0381590:intron | 45.0% | |
| CTCAGAAATTCAGGGAACTC+AGG | - | chr3_1:83810512-83810531 | Msa0381590:intron | 45.0% | |
| AGAAATTCAGGGAACTCAGG+TGG | - | chr3_1:83810515-83810534 | Msa0381590:intron | 45.0% | |
| TCAGGTGGTTATACTCAGCA+AGG | - | chr3_1:83810530-83810549 | Msa0381590:intron | 45.0% | |
| CAACAAGCTGGTTATGGCTA+TGG | - | chr3_1:83810602-83810621 | Msa0381590:intron | 45.0% | |
| AACCTCCTTCCTCTGGTTAT+AGG | - | chr3_1:83810864-83810883 | Msa0381590:intron | 45.0% | |
| ACCTGGACAGGGTTATTGTT+AGG | - | chr3_1:83810889-83810908 | Msa0381590:intron | 45.0% | |
| ACCTAACAATAACCCTGTCC+AGG | + | chr3_1:83810893-83810912 | None:intergenic | 45.0% | |
| TTGAATTCCCCCTACTGTTG+TGG | + | chr3_1:83811116-83811135 | None:intergenic | 45.0% | |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | - | chr3_1:83811199-83811218 | Msa0381590:CDS | 45.0% |
| TATCAATTGGTCCGACCTAC+CGG | - | chr3_1:83811293-83811312 | Msa0381590:intron | 45.0% | |
| ! | ACTGGTTTCCTTCTCGTATC+CGG | + | chr3_1:83811315-83811334 | None:intergenic | 45.0% |
| GAAACCAGTGTTATCGGAGA+TGG | - | chr3_1:83811326-83811345 | Msa0381590:intron | 45.0% | |
| AGTCAGCATATGGGTTCTCT+TGG | + | chr3_1:83811530-83811549 | None:intergenic | 45.0% | |
| AAGAGAACCCATATGCTGAC+TGG | - | chr3_1:83811529-83811548 | Msa0381590:intron | 45.0% | |
| TTGACGGTCTTCTCTAAACC+TGG | + | chr3_1:83811687-83811706 | None:intergenic | 45.0% | |
| TTAGAGAAGACCGTCAACGA+TGG | - | chr3_1:83811690-83811709 | Msa0381590:intron | 45.0% | |
| ! | TCAACAACCTTTTCCGACGA+AGG | + | chr3_1:83811744-83811763 | None:intergenic | 45.0% |
| AAATTCAGAGGGAATGGCTC+CGG | + | chr3_1:83811933-83811952 | None:intergenic | 45.0% | |
| !! | TGTGGCTTGGTTGTTTGAAG+GGG | - | chr3_1:83811986-83812005 | Msa0381590:intron | 45.0% |
| CTTGTCAGGGTTCCAACAAT+GGG | - | chr3_1:83812010-83812029 | Msa0381590:intron | 45.0% | |
| ! | ACTAGAATTCTTTTGCCCCC+AGG | + | chr3_1:83812038-83812057 | None:intergenic | 45.0% |
| GTTTCTTTAACCCAGCCTTG+AGG | - | chr3_1:83812060-83812079 | Msa0381590:intron | 45.0% | |
| TTCTAGCGGTCGGTAATGTT+AGG | - | chr3_1:83812095-83812114 | Msa0381590:intron | 45.0% | |
| GGTCGGTAATGTTAGGTATC+TGG | - | chr3_1:83812102-83812121 | Msa0381590:intron | 45.0% | |
| CGGTAATGTTAGGTATCTGG+TGG | - | chr3_1:83812105-83812124 | Msa0381590:intron | 45.0% | |
| TTGAATTCCCCCTACTGTTG+TGG | + | chr3_1:83811116-83811135 | None:intergenic | 45.0% | |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | - | chr3_1:83811199-83811218 | Msa0381590:CDS | 45.0% |
| GGTTCCTATCAGTTATGGTC+AGG | - | chr3_1:83812493-83812512 | Msa0381590:intron | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3_1:83812605-83812624 | None:intergenic | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3_1:83812606-83812625 | None:intergenic | 45.0% | |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3_1:83812678-83812697 | None:intergenic | 45.0% |
| CTGGTTGAGGAGTTTCTTGT+TGG | + | chr3_1:83812727-83812746 | None:intergenic | 45.0% | |
| CAACAAGAAACTCCTCAACC+AGG | - | chr3_1:83812725-83812744 | Msa0381590:CDS | 45.0% | |
| GAAACTCCTCAACCAGGTTA+TGG | - | chr3_1:83812731-83812750 | Msa0381590:CDS | 45.0% | |
| AACTCCTCAACCAGGTTATG+GGG | - | chr3_1:83812733-83812752 | Msa0381590:CDS | 45.0% | |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3_1:83812780-83812799 | None:intergenic | 45.0% |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3_1:83812779-83812798 | Msa0381590:CDS | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3_1:83812785-83812804 | Msa0381590:CDS | 45.0% | |
| TCTGGTTATGGACCTGGTTA+TGG | - | chr3_1:83812797-83812816 | Msa0381590:CDS | 45.0% | |
| ! | TAAGCAGGTGGATTTGCACT+TGG | + | chr3_1:83812842-83812861 | None:intergenic | 45.0% |
| AGTGCAAATCCACCTGCTTA+TGG | - | chr3_1:83812842-83812861 | Msa0381590:CDS | 45.0% | |
| TGTGATTGACCATAAGCAGG+TGG | + | chr3_1:83812854-83812873 | None:intergenic | 45.0% | |
| GACTGTGATTGACCATAAGC+AGG | + | chr3_1:83812857-83812876 | None:intergenic | 45.0% | |
| !! | TGAGGAGCACCATATGATTG+CGG | + | chr3_1:83812998-83813017 | None:intergenic | 45.0% |
| CAATCATATGGTGCTCCTCA+AGG | - | chr3_1:83812998-83813017 | Msa0381590:CDS | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | chr3_1:83810954-83810973 | Msa0381590:intron | 5.0% |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | chr3_1:83810954-83810973 | Msa0381590:intron | 5.0% |
| ! | CTTGGTTCGTTTGGGATCGT+AGG | + | chr3_1:83807736-83807755 | None:intergenic | 50.0% |
| !! | CGATTGTGGAGCACCGTTAT+CGG | + | chr3_1:83807760-83807779 | None:intergenic | 50.0% |
| ! | CGATAACGGTGCTCCACAAT+CGG | - | chr3_1:83807758-83807777 | Msa0381590:CDS | 50.0% |
| ! | GATAACGGTGCTCCACAATC+GGG | - | chr3_1:83807759-83807778 | Msa0381590:CDS | 50.0% |
| ATAACGGTGCTCCACAATCG+GGG | - | chr3_1:83807760-83807779 | Msa0381590:CDS | 50.0% | |
| TCGCAGCAAGGTGGTAGTTA+TGG | - | chr3_1:83807813-83807832 | Msa0381590:CDS | 50.0% | |
| TCAGCAGAAGAAACAGCGTC+AGG | + | chr3_1:83808008-83808027 | None:intergenic | 50.0% | |
| AGACGGATGGTTGCACAATC+TGG | - | chr3_1:83809002-83809021 | Msa0381590:intron | 50.0% | |
| GACGGATGGTTGCACAATCT+GGG | - | chr3_1:83809003-83809022 | Msa0381590:intron | 50.0% | |
| ACGGATGGTTGCACAATCTG+GGG | - | chr3_1:83809004-83809023 | Msa0381590:intron | 50.0% | |
| GAGTATGCAAGCTTCTACCG+GGG | - | chr3_1:83809197-83809216 | Msa0381590:intron | 50.0% | |
| GAAAACCTGAATTCGTGCCC+CGG | + | chr3_1:83809217-83809236 | None:intergenic | 50.0% | |
| ACTGGAGACTGCAGTAGCTA+TGG | - | chr3_1:83809800-83809819 | Msa0381590:intron | 50.0% | |
| GTAGATGAGCACAAGTCCCA+AGG | + | chr3_1:83810071-83810090 | None:intergenic | 50.0% | |
| ! | TGGCCTGTTAGATTGGGTTG+AGG | - | chr3_1:83810205-83810224 | Msa0381590:intron | 50.0% |
| !! | GGCCTGTTAGATTGGGTTGA+GGG | - | chr3_1:83810206-83810225 | Msa0381590:intron | 50.0% |
| !! | CCATAACCAGCTTGTTGTGC+AGG | + | chr3_1:83810599-83810618 | None:intergenic | 50.0% |
| CCTGCACAACAAGCTGGTTA+TGG | - | chr3_1:83810596-83810615 | Msa0381590:intron | 50.0% | |
| GATGGACCAGAGTATGATCC+AGG | + | chr3_1:83810632-83810651 | None:intergenic | 50.0% | |
| GGCATGTTATACTGCGGTGA+TGG | + | chr3_1:83810650-83810669 | None:intergenic | 50.0% | |
| GGCTGAGGCATGTTATACTG+CGG | + | chr3_1:83810656-83810675 | None:intergenic | 50.0% | |
| TGAGGAGGATAGCCTGCATA+TGG | + | chr3_1:83810680-83810699 | None:intergenic | 50.0% | |
| TGAGTAGACTGCTGGTGAGA+TGG | + | chr3_1:83810746-83810765 | None:intergenic | 50.0% | |
| CACTTGCATGAGTAGACTGC+TGG | + | chr3_1:83810754-83810773 | None:intergenic | 50.0% | |
| CAGCAGTCTACTCATGCAAG+TGG | - | chr3_1:83810752-83810771 | Msa0381590:intron | 50.0% | |
| !! | TTTGCTGTTGCTGGGGTTGT+TGG | + | chr3_1:83810793-83810812 | None:intergenic | 50.0% |
| !!! | CCAGGATTTTGCTGTTGCTG+GGG | + | chr3_1:83810800-83810819 | None:intergenic | 50.0% |
| !!! | CCCAGGATTTTGCTGTTGCT+GGG | + | chr3_1:83810801-83810820 | None:intergenic | 50.0% |
| CCCAGCAACAGCAAAATCCT+GGG | - | chr3_1:83810798-83810817 | Msa0381590:intron | 50.0% | |
| CCAGCAACAGCAAAATCCTG+GGG | - | chr3_1:83810799-83810818 | Msa0381590:intron | 50.0% | |
| CAGCAACAGCAAAATCCTGG+GGG | - | chr3_1:83810800-83810819 | Msa0381590:intron | 50.0% | |
| TACAGTCAACCTCCTTCCTC+TGG | - | chr3_1:83810857-83810876 | Msa0381590:intron | 50.0% | |
| TGCCTATAACCAGAGGAAGG+AGG | + | chr3_1:83810869-83810888 | None:intergenic | 50.0% | |
| GGTTGCCTATAACCAGAGGA+AGG | + | chr3_1:83810872-83810891 | None:intergenic | 50.0% | |
| TCCTCTGGTTATAGGCAACC+TGG | - | chr3_1:83810872-83810891 | Msa0381590:intron | 50.0% | |
| TCCAGGTTGCCTATAACCAG+AGG | + | chr3_1:83810876-83810895 | None:intergenic | 50.0% | |
| TGGTTATAGGCAACCTGGAC+AGG | - | chr3_1:83810877-83810896 | Msa0381590:intron | 50.0% | |
| GGTTATAGGCAACCTGGACA+GGG | - | chr3_1:83810878-83810897 | Msa0381590:intron | 50.0% | |
| TGATTAGGAGCGGTTACAGG+CGG | - | chr3_1:83811054-83811073 | Msa0381590:intron | 50.0% | |
| GCCATTTGGCCACAACAGTA+GGG | - | chr3_1:83811104-83811123 | Msa0381590:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | chr3_1:83811105-83811124 | Msa0381590:intron | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | - | chr3_1:83811106-83811125 | Msa0381590:intron | 50.0% | |
| !! | TCTCTGAGGAGCTTTTGCTC+TGG | - | chr3_1:83811188-83811207 | Msa0381590:CDS | 50.0% |
| !! | CTCTGAGGAGCTTTTGCTCT+GGG | - | chr3_1:83811189-83811208 | Msa0381590:CDS | 50.0% |
| GGTAGGTCGGACCAATTGAT+AGG | + | chr3_1:83811294-83811313 | None:intergenic | 50.0% | |
| GTTTCCTTCTCGTATCCGGT+AGG | + | chr3_1:83811311-83811330 | None:intergenic | 50.0% | |
| CCATCCATCTCCGATAACAC+TGG | + | chr3_1:83811333-83811352 | None:intergenic | 50.0% | |
| CCAGTGTTATCGGAGATGGA+TGG | - | chr3_1:83811330-83811349 | Msa0381590:intron | 50.0% | |
| ATCCTGCTGGATGGATCACA+AGG | - | chr3_1:83811397-83811416 | Msa0381590:intron | 50.0% | |
| TCCTGCTGGATGGATCACAA+GGG | - | chr3_1:83811398-83811417 | Msa0381590:intron | 50.0% | |
| ! | GCAGTGGGCTTTCATGAGTA+TGG | - | chr3_1:83811467-83811486 | Msa0381590:CDS | 50.0% |
| GTGGGCTTTCATGAGTATGG+AGG | - | chr3_1:83811470-83811489 | Msa0381590:CDS | 50.0% | |
| AAGACCGTCAACGATGGAGA+AGG | - | chr3_1:83811696-83811715 | Msa0381590:intron | 50.0% | |
| CCTTCCTTCTCCATCGTTGA+CGG | + | chr3_1:83811703-83811722 | None:intergenic | 50.0% | |
| !! | GTGGCTTGGTTGTTTGAAGG+GGG | - | chr3_1:83811987-83812006 | Msa0381590:intron | 50.0% |
| TTGTTTGAAGGGGGCTTGTC+AGG | - | chr3_1:83811996-83812015 | Msa0381590:intron | 50.0% | |
| TGTTTGAAGGGGGCTTGTCA+GGG | - | chr3_1:83811997-83812016 | Msa0381590:intron | 50.0% | |
| GCTTGTCAGGGTTCCAACAA+TGG | - | chr3_1:83812009-83812028 | Msa0381590:intron | 50.0% | |
| GGTTCCAACAATGGGATCCT+GGG | - | chr3_1:83812018-83812037 | Msa0381590:intron | 50.0% | |
| GTTCCAACAATGGGATCCTG+GGG | - | chr3_1:83812019-83812038 | Msa0381590:intron | 50.0% | |
| TTCCAACAATGGGATCCTGG+GGG | - | chr3_1:83812020-83812039 | Msa0381590:intron | 50.0% | |
| TTAACCCAGCCTTGAGGACA+AGG | - | chr3_1:83812066-83812085 | Msa0381590:intron | 50.0% | |
| ! | GAAACACAGCCTTGTCCTCA+AGG | + | chr3_1:83812078-83812097 | None:intergenic | 50.0% |
| !! | GGACAAGGCTGTGTTTCTAG+CGG | - | chr3_1:83812081-83812100 | Msa0381590:intron | 50.0% |
| !! | AAGGCTGTGTTTCTAGCGGT+CGG | - | chr3_1:83812085-83812104 | Msa0381590:intron | 50.0% |
| TGATTAGGAGCGGTTACAGG+CGG | - | chr3_1:83811054-83811073 | Msa0381590:intron | 50.0% | |
| GCCATTTGGCCACAACAGTA+GGG | - | chr3_1:83811104-83811123 | Msa0381590:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | chr3_1:83811105-83811124 | Msa0381590:intron | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | - | chr3_1:83811106-83811125 | Msa0381590:intron | 50.0% | |
| !! | TCTCTGAGGAGCTTTTGCTC+TGG | - | chr3_1:83811188-83811207 | Msa0381590:CDS | 50.0% |
| !! | CTCTGAGGAGCTTTTGCTCT+GGG | - | chr3_1:83811189-83811208 | Msa0381590:CDS | 50.0% |
| GCGCAACAACAATCTGGGTA+TGG | - | chr3_1:83812536-83812555 | Msa0381590:intron | 50.0% | |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3_1:83812590-83812609 | Msa0381590:intron | 50.0% |
| TGGGAGTAATCCAACCCAAG+AGG | - | chr3_1:83812616-83812635 | Msa0381590:CDS | 50.0% | |
| GGGAGTAATCCAACCCAAGA+GGG | - | chr3_1:83812617-83812636 | Msa0381590:CDS | 50.0% | |
| GGAGTAATCCAACCCAAGAG+GGG | - | chr3_1:83812618-83812637 | Msa0381590:CDS | 50.0% | |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3_1:83812679-83812698 | None:intergenic | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3_1:83812705-83812724 | None:intergenic | 50.0% |
| TTGACTTCCATAGGCCGCTT+GGG | + | chr3_1:83812771-83812790 | None:intergenic | 50.0% | |
| TCTGGCTGAGCATATCCAGA+AGG | + | chr3_1:83812935-83812954 | None:intergenic | 50.0% | |
| GGATATGCTCAGCCAGAGTT+AGG | - | chr3_1:83812938-83812957 | Msa0381590:CDS | 50.0% | |
| GCTCTATGAGTGCCTAACTC+TGG | + | chr3_1:83812953-83812972 | None:intergenic | 50.0% | |
| ! | ATAGAGCACCAGTGCAACCA+GGG | - | chr3_1:83812966-83812985 | Msa0381590:CDS | 50.0% |
| TATGATTGCGGACCATACCC+TGG | + | chr3_1:83812986-83813005 | None:intergenic | 50.0% | |
| GGGTATGGTCCGCAATCATA+TGG | - | chr3_1:83812986-83813005 | Msa0381590:CDS | 50.0% | |
| TCATATGGTGCTCCTCAAGG+TGG | - | chr3_1:83813001-83813020 | Msa0381590:CDS | 50.0% | |
| TTCCATATGACGGTGGAGTC+TGG | + | chr3_1:83813042-83813061 | None:intergenic | 50.0% | |
| ACTTTAGCAACACTGCCCTG+TGG | + | chr3_1:83813136-83813155 | None:intergenic | 50.0% | |
| ! | TTCGAGTTCGATGTCCGTGG+CGG | + | chr3_1:83807640-83807659 | None:intergenic | 55.0% |
| ! | GACTTCGAGTTCGATGTCCG+TGG | + | chr3_1:83807643-83807662 | None:intergenic | 55.0% |
| TTGGGATCGTAGGAGAGTGG+TGG | + | chr3_1:83807726-83807745 | None:intergenic | 55.0% | |
| ! | CGTTTGGGATCGTAGGAGAG+TGG | + | chr3_1:83807729-83807748 | None:intergenic | 55.0% |
| !! | TGGAGCACCGTTATCGGACT+TGG | + | chr3_1:83807754-83807773 | None:intergenic | 55.0% |
| AAGCCGCAATACTCGCAGCA+AGG | - | chr3_1:83807801-83807820 | Msa0381590:CDS | 55.0% | |
| ! | CCACCTTGCTGCGAGTATTG+CGG | + | chr3_1:83807807-83807826 | None:intergenic | 55.0% |
| CGGATGGTTGCACAATCTGG+GGG | - | chr3_1:83809005-83809024 | Msa0381590:intron | 55.0% | |
| ! | CCAAAAAGCATGCCTGCAGC+TGG | + | chr3_1:83809084-83809103 | None:intergenic | 55.0% |
| ! | CCAGCTGCAGGCATGCTTTT+TGG | - | chr3_1:83809081-83809100 | Msa0381590:intron | 55.0% |
| TTCTACCGGGGCACGAATTC+AGG | - | chr3_1:83809209-83809228 | Msa0381590:intron | 55.0% | |
| ACTGCCCGACTCTCATGACT+TGG | - | chr3_1:83809329-83809348 | Msa0381590:intron | 55.0% | |
| ATACCTTTGCATCCTCCCCC+AGG | - | chr3_1:83809402-83809421 | Msa0381590:intron | 55.0% | |
| GTTGATGTATCACCTGGGGG+AGG | + | chr3_1:83809417-83809436 | None:intergenic | 55.0% | |
| ! | TGGGTTGAGGGAAGGTTGAG+AGG | - | chr3_1:83810218-83810237 | Msa0381590:intron | 55.0% |
| GGTTATGGCTATGGGCAACC+TGG | - | chr3_1:83810611-83810630 | Msa0381590:intron | 55.0% | |
| GGGCAACCTGGATCATACTC+TGG | - | chr3_1:83810623-83810642 | Msa0381590:intron | 55.0% | |
| ATGCCTCAGCCACCATATGC+AGG | - | chr3_1:83810665-83810684 | Msa0381590:intron | 55.0% | |
| TAGCCTGCATATGGTGGCTG+AGG | + | chr3_1:83810671-83810690 | None:intergenic | 55.0% | |
| GGAGGATAGCCTGCATATGG+TGG | + | chr3_1:83810677-83810696 | None:intergenic | 55.0% | |
| GAATATCCACCGGGTTGCTG+AGG | + | chr3_1:83810698-83810717 | None:intergenic | 55.0% | |
| CAGTTGGCGGAATATCCACC+GGG | + | chr3_1:83810707-83810726 | None:intergenic | 55.0% | |
| CCAGTTGGCGGAATATCCAC+CGG | + | chr3_1:83810708-83810727 | None:intergenic | 55.0% | |
| CGGTGGATATTCCGCCAACT+GGG | - | chr3_1:83810706-83810725 | Msa0381590:intron | 55.0% | |
| ! | AGTCGATTGGTCCCAGTTGG+CGG | + | chr3_1:83810720-83810739 | None:intergenic | 55.0% |
| ! | AGCAGTCGATTGGTCCCAGT+TGG | + | chr3_1:83810723-83810742 | None:intergenic | 55.0% |
| GGTGAGATGGAGCAGTCGAT+TGG | + | chr3_1:83810733-83810752 | None:intergenic | 55.0% | |
| CCCCAGCAACAGCAAAATCC+TGG | - | chr3_1:83810797-83810816 | Msa0381590:intron | 55.0% | |
| !!! | CCCCAGGATTTTGCTGTTGC+TGG | + | chr3_1:83810802-83810821 | None:intergenic | 55.0% |
| GTCCTCCACAACCAGCTGAT+GGG | - | chr3_1:83810822-83810841 | Msa0381590:intron | 55.0% | |
| CTGTATGCAGACCCATCAGC+TGG | + | chr3_1:83810836-83810855 | None:intergenic | 55.0% | |
| GGCCATTTGGCCACAACAGT+AGG | - | chr3_1:83811103-83811122 | Msa0381590:intron | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | chr3_1:83811108-83811127 | None:intergenic | 55.0% | |
| CCTTCTCGTATCCGGTAGGT+CGG | + | chr3_1:83811307-83811326 | None:intergenic | 55.0% | |
| TTTACTGGGACGGATCCTGC+TGG | - | chr3_1:83811384-83811403 | Msa0381590:intron | 55.0% | |
| CCGTCAACGATGGAGAAGGA+AGG | - | chr3_1:83811700-83811719 | Msa0381590:intron | 55.0% | |
| GGGTTCCAACAATGGGATCC+TGG | - | chr3_1:83812017-83812036 | Msa0381590:intron | 55.0% | |
| ! | ACAGCCTTGTCCTCAAGGCT+GGG | + | chr3_1:83812073-83812092 | None:intergenic | 55.0% |
| GGCCATTTGGCCACAACAGT+AGG | - | chr3_1:83811103-83811122 | Msa0381590:intron | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | chr3_1:83811108-83811127 | None:intergenic | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3_1:83812596-83812615 | Msa0381590:intron | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3_1:83812597-83812616 | Msa0381590:intron | 55.0% | |
| ! | GTTGGAAGTGTGCCCCTCTT+GGG | + | chr3_1:83812633-83812652 | None:intergenic | 55.0% |
| ! | AGTTGGAAGTGTGCCCCTCT+TGG | + | chr3_1:83812634-83812653 | None:intergenic | 55.0% |
| ! | GAGGGGCACACTTCCAACTA+TGG | - | chr3_1:83812635-83812654 | Msa0381590:CDS | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+AGG | + | chr3_1:83812675-83812694 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3_1:83812687-83812706 | None:intergenic | 55.0% |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3_1:83812692-83812711 | None:intergenic | 55.0% | |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3_1:83812706-83812725 | None:intergenic | 55.0% |
| GCTACCCCATAACCTGGTTG+AGG | + | chr3_1:83812740-83812759 | None:intergenic | 55.0% | |
| ! | GTTGACTTCCATAGGCCGCT+TGG | + | chr3_1:83812772-83812791 | None:intergenic | 55.0% |
| CCAGGTCCATAACCAGACTG+TGG | + | chr3_1:83812794-83812813 | None:intergenic | 55.0% | |
| CCACAGTCTGGTTATGGACC+TGG | - | chr3_1:83812791-83812810 | Msa0381590:CDS | 55.0% | |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3_1:83812827-83812846 | None:intergenic | 55.0% |
| ACTGACCATAGCCTCCTGCT+GGG | + | chr3_1:83812886-83812905 | None:intergenic | 55.0% | |
| GTCAGCATATCCCTCTAGCC+AGG | - | chr3_1:83812904-83812923 | Msa0381590:CDS | 55.0% | |
| CTGAGCATATCCAGAAGGCG+GGG | + | chr3_1:83812930-83812949 | None:intergenic | 55.0% | |
| GCTGAGCATATCCAGAAGGC+GGG | + | chr3_1:83812931-83812950 | None:intergenic | 55.0% | |
| GGCTGAGCATATCCAGAAGG+CGG | + | chr3_1:83812932-83812951 | None:intergenic | 55.0% | |
| ! | CATAGAGCACCAGTGCAACC+AGG | - | chr3_1:83812965-83812984 | Msa0381590:CDS | 55.0% |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3_1:83813105-83813124 | Msa0381590:five_prime_UTR | 55.0% | |
| AACTGCACAGGCTGTTCCAC+AGG | - | chr3_1:83813117-83813136 | Msa0381590:five_prime_UTR | 55.0% | |
| ACTGCACAGGCTGTTCCACA+GGG | - | chr3_1:83813118-83813137 | Msa0381590:five_prime_UTR | 55.0% | |
| CGATGAACAACCCACCGCCA+CGG | - | chr3_1:83807623-83807642 | Msa0381590:CDS | 60.0% | |
| AGTTCGATGTCCGTGGCGGT+GGG | + | chr3_1:83807636-83807655 | None:intergenic | 60.0% | |
| GGTGACGCTGAGAAGACGAG+CGG | + | chr3_1:83807697-83807716 | None:intergenic | 60.0% | |
| GCTCGTCTTCTCAGCGTCAC+CGG | - | chr3_1:83807696-83807715 | Msa0381590:CDS | 60.0% | |
| CCGCAATACTCGCAGCAAGG+TGG | - | chr3_1:83807804-83807823 | Msa0381590:CDS | 60.0% | |
| TAGGCTGAAGCTGGGGCTTC+TGG | - | chr3_1:83808969-83808988 | Msa0381590:intron | 60.0% | |
| CTTCTGGCGGTGGCACTAGA+CGG | - | chr3_1:83808985-83809004 | Msa0381590:intron | 60.0% | |
| TCACCTGGGGGAGGATGCAA+AGG | + | chr3_1:83809408-83809427 | None:intergenic | 60.0% | |
| AGCTAGACGGTGGTCGGGAT+TGG | + | chr3_1:83810559-83810578 | None:intergenic | 60.0% | |
| AATCCCGACCACCGTCTAGC+TGG | - | chr3_1:83810558-83810577 | Msa0381590:intron | 60.0% | |
| ATCCCGACCACCGTCTAGCT+GGG | - | chr3_1:83810559-83810578 | Msa0381590:intron | 60.0% | |
| TGTTGTGCAGGAGCAGCAGG+AGG | + | chr3_1:83810587-83810606 | None:intergenic | 60.0% | |
| !! | GCTTGTTGTGCAGGAGCAGC+AGG | + | chr3_1:83810590-83810609 | None:intergenic | 60.0% |
| GCTGCTCCTGCACAACAAGC+TGG | - | chr3_1:83810590-83810609 | Msa0381590:intron | 60.0% | |
| GGCTATCCTCCTCAGCAACC+CGG | - | chr3_1:83810686-83810705 | Msa0381590:intron | 60.0% | |
| TATCCTCCTCAGCAACCCGG+TGG | - | chr3_1:83810689-83810708 | Msa0381590:intron | 60.0% | |
| TATCCACCGGGTTGCTGAGG+AGG | + | chr3_1:83810695-83810714 | None:intergenic | 60.0% | |
| CCGGTGGATATTCCGCCAAC+TGG | - | chr3_1:83810705-83810724 | Msa0381590:intron | 60.0% | |
| GGTCCTCCACAACCAGCTGA+TGG | - | chr3_1:83810821-83810840 | Msa0381590:intron | 60.0% | |
| GACCCATCAGCTGGTTGTGG+AGG | + | chr3_1:83810827-83810846 | None:intergenic | 60.0% | |
| GCAGACCCATCAGCTGGTTG+TGG | + | chr3_1:83810830-83810849 | None:intergenic | 60.0% | |
| CCGACCTACCGGATACGAGA+AGG | - | chr3_1:83811304-83811323 | Msa0381590:intron | 60.0% | |
| GCCCTTGTGATCCATCCAGC+AGG | + | chr3_1:83811402-83811421 | None:intergenic | 60.0% | |
| TTCAGAGGGAATGGCTCCGG+CGG | + | chr3_1:83811930-83811949 | None:intergenic | 60.0% | |
| TGCCCCCAGGATCCCATTGT+TGG | + | chr3_1:83812025-83812044 | None:intergenic | 60.0% | |
| ! | CACAGCCTTGTCCTCAAGGC+TGG | + | chr3_1:83812074-83812093 | None:intergenic | 60.0% |
| GAAGTGTGCCCCTCTTGGGT+TGG | + | chr3_1:83812629-83812648 | None:intergenic | 60.0% | |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3_1:83812688-83812707 | None:intergenic | 60.0% |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3_1:83812689-83812708 | Msa0381590:CDS | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3_1:83812693-83812712 | None:intergenic | 60.0% | |
| GTAGGGGCTACCCCATAACC+TGG | + | chr3_1:83812746-83812765 | None:intergenic | 60.0% | |
| ATAGGCCGCTTGGGAGGTAG+GGG | + | chr3_1:83812762-83812781 | None:intergenic | 60.0% | |
| CATAGGCCGCTTGGGAGGTA+GGG | + | chr3_1:83812763-83812782 | None:intergenic | 60.0% | |
| ACTTCCATAGGCCGCTTGGG+AGG | + | chr3_1:83812768-83812787 | None:intergenic | 60.0% | |
| !! | GAGGGAGGAGCACCATAACC+AGG | + | chr3_1:83812812-83812831 | None:intergenic | 60.0% |
| TCACAGTCACCTAGCCCAGC+AGG | - | chr3_1:83812869-83812888 | Msa0381590:CDS | 60.0% | |
| GACTGACCATAGCCTCCTGC+TGG | + | chr3_1:83812887-83812906 | None:intergenic | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3_1:83812971-83812990 | Msa0381590:CDS | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3_1:83812977-83812996 | None:intergenic | 60.0% | |
| ! | TAGCTAGGCTGGCCACCTTG+AGG | + | chr3_1:83813016-83813035 | None:intergenic | 60.0% |
| CAAGGTGGCCAGCCTAGCTA+TGG | - | chr3_1:83813016-83813035 | Msa0381590:CDS | 60.0% | |
| GAGTCTGGCCATAGCTAGGC+TGG | + | chr3_1:83813027-83813046 | None:intergenic | 60.0% | |
| GGTGGAGTCTGGCCATAGCT+AGG | + | chr3_1:83813031-83813050 | None:intergenic | 60.0% | |
| GGCCAGACTCCACCGTCATA+TGG | - | chr3_1:83813037-83813056 | Msa0381590:CDS | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3_1:83813091-83813110 | Msa0381590:five_prime_UTR | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3_1:83813097-83813116 | None:intergenic | 60.0% | |
| GAGTTCGATGTCCGTGGCGG+TGG | + | chr3_1:83807637-83807656 | None:intergenic | 65.0% | |
| ! | GTAGGAGAGTGGTGGAGCGC+CGG | + | chr3_1:83807718-83807737 | None:intergenic | 65.0% |
| GCTGAAGCTGGGGCTTCTGG+CGG | - | chr3_1:83808972-83808991 | Msa0381590:intron | 65.0% | |
| TGGCGGTGGCACTAGACGGA+TGG | - | chr3_1:83808989-83809008 | Msa0381590:intron | 65.0% | |
| AGCCCAGCTAGACGGTGGTC+GGG | + | chr3_1:83810564-83810583 | None:intergenic | 65.0% | |
| GAGCCCAGCTAGACGGTGGT+CGG | + | chr3_1:83810565-83810584 | None:intergenic | 65.0% | |
| GCAGGAGGAGCCCAGCTAGA+CGG | + | chr3_1:83810572-83810591 | None:intergenic | 65.0% | |
| CTGGGACGGATCCTGCTGGA+TGG | - | chr3_1:83811388-83811407 | Msa0381590:intron | 65.0% | |
| GGTCTACCCACAACCACCGC+CGG | - | chr3_1:83811911-83811930 | Msa0381590:intron | 65.0% | |
| ATGGCTCCGGCGGTGGTTGT+GGG | + | chr3_1:83811920-83811939 | None:intergenic | 65.0% | |
| AATGGCTCCGGCGGTGGTTG+TGG | + | chr3_1:83811921-83811940 | None:intergenic | 65.0% | |
| GGTAGCCCCTACCTCCCAAG+CGG | - | chr3_1:83812754-83812773 | Msa0381590:CDS | 65.0% | |
| CCATAGGCCGCTTGGGAGGT+AGG | + | chr3_1:83812764-83812783 | None:intergenic | 65.0% | |
| CCTACCTCCCAAGCGGCCTA+TGG | - | chr3_1:83812761-83812780 | Msa0381590:CDS | 65.0% | |
| CAGTCACCTAGCCCAGCAGG+AGG | - | chr3_1:83812872-83812891 | Msa0381590:CDS | 65.0% | |
| CCATAGCCTCCTGCTGGGCT+AGG | + | chr3_1:83812881-83812900 | None:intergenic | 65.0% | |
| CCTAGCCCAGCAGGAGGCTA+TGG | - | chr3_1:83812878-83812897 | Msa0381590:CDS | 65.0% | |
| CATATCCAGAAGGCGGGGCC+TGG | + | chr3_1:83812925-83812944 | None:intergenic | 65.0% | |
| GAAGCTGGGGCTTCTGGCGG+TGG | - | chr3_1:83808975-83808994 | Msa0381590:intron | 70.0% | |
| GGAGGAGCCCAGCTAGACGG+TGG | + | chr3_1:83810569-83810588 | None:intergenic | 70.0% | |
| GCTGGTTGTGGAGGACCCCC+AGG | + | chr3_1:83810818-83810837 | None:intergenic | 70.0% | |
| AGAGGGAATGGCTCCGGCGG+TGG | + | chr3_1:83811927-83811946 | None:intergenic | 70.0% | |
| GAAGGCGGGGCCTGGCTAGA+GGG | + | chr3_1:83812917-83812936 | None:intergenic | 70.0% | |
| AGAAGGCGGGGCCTGGCTAG+AGG | + | chr3_1:83812918-83812937 | None:intergenic | 70.0% | |
| TCTAGCCAGGCCCCGCCTTC+TGG | - | chr3_1:83812917-83812936 | Msa0381590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 83807491 | 83813171 | 83807491 | ID=Msa0381590;Name=Msa0381590 |
| chr3_1 | mRNA | 83807491 | 83813171 | 83807491 | ID=Msa0381590-mRNA-1;Parent=Msa0381590;Name=Msa0381590-mRNA-1;_AED=0.16;_eAED=0.16;_QI=91|0.8|0.66|1|1|1|6|0|552 |
| chr3_1 | exon | 83807491 | 83808055 | 83807491 | ID=Msa0381590-mRNA-1:exon:21710;Parent=Msa0381590-mRNA-1 |
| chr3_1 | exon | 83809819 | 83810156 | 83809819 | ID=Msa0381590-mRNA-1:exon:21709;Parent=Msa0381590-mRNA-1 |
| chr3_1 | exon | 83811144 | 83811263 | 83811144 | ID=Msa0381590-mRNA-1:exon:21708;Parent=Msa0381590-mRNA-1 |
| chr3_1 | exon | 83811432 | 83811503 | 83811432 | ID=Msa0381590-mRNA-1:exon:21707;Parent=Msa0381590-mRNA-1 |
| chr3_1 | exon | 83811601 | 83811690 | 83811601 | ID=Msa0381590-mRNA-1:exon:21706;Parent=Msa0381590-mRNA-1 |
| chr3_1 | exon | 83812607 | 83813171 | 83812607 | ID=Msa0381590-mRNA-1:exon:21705;Parent=Msa0381590-mRNA-1 |
| chr3_1 | five_prime_UTR | 83813081 | 83813171 | 83813081 | ID=Msa0381590-mRNA-1:five_prime_utr;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83812607 | 83813080 | 83812607 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83811601 | 83811690 | 83811601 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83811432 | 83811503 | 83811432 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83811144 | 83811263 | 83811144 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83809819 | 83810156 | 83809819 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| chr3_1 | CDS | 83807491 | 83808055 | 83807491 | ID=Msa0381590-mRNA-1:cds;Parent=Msa0381590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
