Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443920 | XP_003600611.1 | 97.059 | 68 | 2 | 0 | 6 | 73 | 15 | 82 | 1.55e-38 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443920 | G7J7W8 | 97.059 | 68 | 2 | 0 | 6 | 73 | 15 | 82 | 7.38e-39 | 132 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0443920 | 0.803922 | 2.766439e-49 | -8.615850e-47 |
| Msa0012040 | Msa0443920 | 0.827233 | 1.751843e-54 | -8.615850e-47 |
| Msa0013050 | Msa0443920 | -0.827108 | 1.876341e-54 | -8.615850e-47 |
| Msa0014710 | Msa0443920 | 0.809428 | 1.901262e-50 | -8.615850e-47 |
| Msa0023470 | Msa0443920 | 0.804339 | 2.264951e-49 | -8.615850e-47 |
| Msa0028660 | Msa0443920 | 0.821408 | 4.102972e-53 | -8.615850e-47 |
| Msa0033980 | Msa0443920 | 0.809222 | 2.105379e-50 | -8.615850e-47 |
| Msa0037700 | Msa0443920 | 0.812546 | 4.016022e-51 | -8.615850e-47 |
| Msa0039330 | Msa0443920 | 0.817762 | 2.786890e-52 | -8.615850e-47 |
| Msa0063350 | Msa0443920 | -0.808013 | 3.814913e-50 | -8.615850e-47 |
| Msa0068740 | Msa0443920 | -0.801623 | 8.251178e-49 | -8.615850e-47 |
| Msa0075880 | Msa0443920 | 0.802788 | 4.749852e-49 | -8.615850e-47 |
| Msa0081930 | Msa0443920 | 0.813686 | 2.257194e-51 | -8.615850e-47 |
| Msa0084940 | Msa0443920 | 0.816343 | 5.807073e-52 | -8.615850e-47 |
| Msa0086650 | Msa0443920 | 0.809736 | 1.633183e-50 | -8.615850e-47 |
| Msa0092990 | Msa0443920 | 0.818104 | 2.332695e-52 | -8.615850e-47 |
| Msa0115270 | Msa0443920 | 0.802723 | 4.900927e-49 | -8.615850e-47 |
| Msa0119850 | Msa0443920 | 0.809617 | 1.731864e-50 | -8.615850e-47 |
| Msa0120340 | Msa0443920 | 0.813156 | 2.952230e-51 | -8.615850e-47 |
| Msa0133130 | Msa0443920 | 0.800034 | 1.741917e-48 | -8.615850e-47 |
| Msa0135380 | Msa0443920 | 0.808874 | 2.499390e-50 | -8.615850e-47 |
| Msa0140860 | Msa0443920 | 0.801010 | 1.101717e-48 | -8.615850e-47 |
| Msa0145310 | Msa0443920 | 0.814164 | 1.770954e-51 | -8.615850e-47 |
| Msa0147250 | Msa0443920 | 0.808499 | 3.006102e-50 | -8.615850e-47 |
| Msa0150800 | Msa0443920 | 0.803596 | 3.233034e-49 | -8.615850e-47 |
| Msa0157100 | Msa0443920 | 0.802971 | 4.355459e-49 | -8.615850e-47 |
| Msa0162770 | Msa0443920 | -0.825431 | 4.704781e-54 | -8.615850e-47 |
| Msa0166870 | Msa0443920 | 0.802972 | 4.352664e-49 | -8.615850e-47 |
| Msa0172780 | Msa0443920 | 0.802987 | 4.321646e-49 | -8.615850e-47 |
| Msa0173990 | Msa0443920 | 0.842107 | 3.163984e-58 | -8.615850e-47 |
| Msa0178860 | Msa0443920 | -0.808671 | 2.762379e-50 | -8.615850e-47 |
| Msa0197660 | Msa0443920 | 0.839253 | 1.769649e-57 | -8.615850e-47 |
| Msa0217400 | Msa0443920 | 0.805399 | 1.360024e-49 | -8.615850e-47 |
| Msa0223410 | Msa0443920 | -0.809657 | 1.697555e-50 | -8.615850e-47 |
| Msa0229490 | Msa0443920 | -0.803394 | 3.560380e-49 | -8.615850e-47 |
| Msa0369440 | Msa0443920 | 0.804852 | 1.770391e-49 | -8.615850e-47 |
| Msa0376590 | Msa0443920 | 0.811336 | 7.366262e-51 | -8.615850e-47 |
| Msa0379640 | Msa0443920 | 0.832278 | 1.035673e-55 | -8.615850e-47 |
| Msa0380740 | Msa0443920 | 0.806242 | 9.044955e-50 | -8.615850e-47 |
| Msa0381590 | Msa0443920 | -0.801810 | 7.552953e-49 | -8.615850e-47 |
| Msa0389340 | Msa0443920 | 0.802500 | 5.446804e-49 | -8.615850e-47 |
| Msa0389810 | Msa0443920 | 0.817184 | 3.762127e-52 | -8.615850e-47 |
| Msa0404000 | Msa0443920 | 0.867036 | 1.839498e-65 | -8.615850e-47 |
| Msa0404030 | Msa0443920 | 0.878424 | 2.841184e-69 | -8.615850e-47 |
| Msa0406880 | Msa0443920 | 0.812416 | 4.286871e-51 | -8.615850e-47 |
| Msa0412840 | Msa0443920 | 0.804575 | 2.022962e-49 | -8.615850e-47 |
| Msa0416300 | Msa0443920 | 0.818014 | 2.445309e-52 | -8.615850e-47 |
| Msa0431670 | Msa0443920 | 0.822052 | 2.910868e-53 | -8.615850e-47 |
| Msa0432770 | Msa0443920 | 0.830163 | 3.428136e-55 | -8.615850e-47 |
| Msa0442200 | Msa0443920 | 0.828016 | 1.136507e-54 | -8.615850e-47 |
| Msa0442850 | Msa0443920 | 0.826375 | 2.808029e-54 | -8.615850e-47 |
| Msa0443920 | Msa0453330 | 0.801466 | 8.885469e-49 | -8.615850e-47 |
| Msa0443920 | Msa0459770 | -0.801272 | 9.736522e-49 | -8.615850e-47 |
| Msa0443920 | Msa0464900 | 0.809515 | 1.821291e-50 | -8.615850e-47 |
| Msa0443920 | Msa0466390 | 0.829887 | 4.002949e-55 | -8.615850e-47 |
| Msa0443920 | Msa0467900 | -0.802563 | 5.286832e-49 | -8.615850e-47 |
| Msa0443920 | Msa0468130 | 0.815961 | 7.067078e-52 | -8.615850e-47 |
| Msa0443920 | Msa0471800 | 0.811942 | 5.439974e-51 | -8.615850e-47 |
| Msa0443920 | Msa0473240 | 0.828121 | 1.071892e-54 | -8.615850e-47 |
| Msa0443920 | Msa0475580 | 0.803734 | 3.026630e-49 | -8.615850e-47 |
| Msa0443920 | Msa0480000 | 0.814861 | 1.241881e-51 | -8.615850e-47 |
| Msa0443920 | Msa0482190 | -0.800471 | 1.418984e-48 | -8.615850e-47 |
| Msa0443920 | Msa0484780 | 0.833099 | 6.477486e-56 | -8.615850e-47 |
| Msa0443920 | Msa0509390 | 0.810608 | 1.059357e-50 | -8.615850e-47 |
| Msa0443920 | Msa0515010 | 0.802890 | 4.526238e-49 | -8.615850e-47 |
| Msa0443920 | Msa0516370 | 0.805626 | 1.219111e-49 | -8.615850e-47 |
| Msa0443920 | Msa0517110 | 0.802533 | 5.362748e-49 | -8.615850e-47 |
| Msa0443920 | Msa0519000 | 0.800927 | 1.145393e-48 | -8.615850e-47 |
| Msa0443920 | Msa0536220 | 0.839115 | 1.921813e-57 | -8.615850e-47 |
| Msa0443920 | Msa0547320 | 0.804276 | 2.335135e-49 | -8.615850e-47 |
| Msa0443920 | Msa0553220 | -0.829855 | 4.074565e-55 | -8.615850e-47 |
| Msa0443920 | Msa0553460 | 0.801245 | 9.861803e-49 | -8.615850e-47 |
| Msa0443920 | Msa0555020 | 0.803206 | 3.894533e-49 | -8.615850e-47 |
| Msa0443920 | Msa0558690 | 0.836732 | 7.877586e-57 | -8.615850e-47 |
| Msa0443920 | Msa0561130 | -0.808398 | 3.158289e-50 | -8.615850e-47 |
| Msa0443920 | Msa0562440 | 0.817454 | 3.270812e-52 | -8.615850e-47 |
| Msa0443920 | Msa0563840 | 0.809664 | 1.692075e-50 | -8.615850e-47 |
| Msa0443920 | Msa0568820 | 0.810533 | 1.099225e-50 | -8.615850e-47 |
| Msa0443920 | Msa0569500 | 0.816204 | 6.238934e-52 | -8.615850e-47 |
| Msa0443920 | Msa0577220 | 0.820522 | 6.559978e-53 | -8.615850e-47 |
| Msa0443920 | Msa0577500 | 0.803572 | 3.270661e-49 | -8.615850e-47 |
| Msa0443920 | Msa0593650 | 0.810599 | 1.064019e-50 | -8.615850e-47 |
| Msa0443920 | Msa0599580 | 0.826176 | 3.131851e-54 | -8.615850e-47 |
| Msa0443920 | Msa0601850 | 0.820067 | 8.343704e-53 | -8.615850e-47 |
| Msa0443920 | Msa0607540 | 0.808587 | 2.877952e-50 | -8.615850e-47 |
| Msa0443920 | Msa0608710 | 0.801858 | 7.385514e-49 | -8.615850e-47 |
| Msa0443920 | Msa0610430 | 0.843125 | 1.697828e-58 | -8.615850e-47 |
| Msa0443920 | Msa0619070 | 0.804842 | 1.779235e-49 | -8.615850e-47 |
| Msa0443920 | Msa0621590 | 0.835307 | 1.810552e-56 | -8.615850e-47 |
| Msa0443920 | Msa0623080 | 0.828614 | 8.150406e-55 | -8.615850e-47 |
| Msa0443920 | Msa0633840 | 0.829643 | 4.588292e-55 | -8.615850e-47 |
| Msa0443920 | Msa0638070 | 0.832558 | 8.825534e-56 | -8.615850e-47 |
| Msa0443920 | Msa0638320 | 0.811647 | 6.305489e-51 | -8.615850e-47 |
| Msa0443920 | Msa0647450 | -0.824960 | 6.081775e-54 | -8.615850e-47 |
| Msa0443920 | Msa0654010 | 0.807758 | 4.323586e-50 | -8.615850e-47 |
| Msa0443920 | Msa0657610 | 0.800465 | 1.422777e-48 | -8.615850e-47 |
| Msa0443920 | Msa0657970 | 0.815533 | 8.806781e-52 | -8.615850e-47 |
| Msa0443920 | Msa0658570 | 0.807712 | 4.421886e-50 | -8.615850e-47 |
| Msa0443920 | Msa0661190 | -0.854791 | 9.724768e-62 | -8.615850e-47 |
| Msa0443920 | Msa0662650 | 0.825879 | 3.683554e-54 | -8.615850e-47 |
| Msa0443920 | Msa0669440 | 0.804768 | 1.843721e-49 | -8.615850e-47 |
| Msa0443920 | Msa0673460 | 0.813698 | 2.243776e-51 | -8.615850e-47 |
| Msa0443920 | Msa0677270 | 0.802211 | 6.247878e-49 | -8.615850e-47 |
| Msa0443920 | Msa0689010 | 0.808626 | 2.824048e-50 | -8.615850e-47 |
| Msa0443920 | Msa0692230 | 0.816316 | 5.888251e-52 | -8.615850e-47 |
| Msa0443920 | Msa0693380 | 0.816349 | 5.788068e-52 | -8.615850e-47 |
| Msa0443920 | Msa0708860 | 0.826469 | 2.667505e-54 | -8.615850e-47 |
| Msa0443920 | Msa0716840 | 0.840169 | 1.022219e-57 | -8.615850e-47 |
| Msa0443920 | Msa0731180 | 0.820093 | 8.228595e-53 | -8.615850e-47 |
| Msa0443920 | Msa0739120 | 0.804489 | 2.108233e-49 | -8.615850e-47 |
| Msa0443920 | Msa0743260 | 0.821815 | 3.302872e-53 | -8.615850e-47 |
| Msa0443920 | Msa0743720 | 0.811948 | 5.421514e-51 | -8.615850e-47 |
| Msa0443920 | Msa0744170 | -0.813154 | 2.954702e-51 | -8.615850e-47 |
| Msa0443920 | Msa0745790 | 0.821248 | 4.466126e-53 | -8.615850e-47 |
| Msa0443920 | Msa0750350 | 0.814994 | 1.159989e-51 | -8.615850e-47 |
| Msa0443920 | Msa0756630 | -0.807067 | 6.056362e-50 | -8.615850e-47 |
| Msa0443920 | Msa0765380 | 0.800018 | 1.755027e-48 | -8.615850e-47 |
| Msa0443920 | Msa0771720 | 0.826853 | 2.159675e-54 | -8.615850e-47 |
| Msa0443920 | Msa0773840 | 0.842823 | 2.043189e-58 | -8.615850e-47 |
| Msa0443920 | Msa0777230 | 0.805036 | 1.620338e-49 | -8.615850e-47 |
| Msa0443920 | Msa0778520 | 0.815446 | 9.205688e-52 | -8.615850e-47 |
| Msa0443920 | Msa0784380 | 0.806752 | 7.062027e-50 | -8.615850e-47 |
| Msa0443920 | Msa0788070 | -0.801892 | 7.267234e-49 | -8.615850e-47 |
| Msa0443920 | Msa0788710 | 0.819336 | 1.225072e-52 | -8.615850e-47 |
| Msa0443920 | Msa0790660 | -0.802513 | 5.413676e-49 | -8.615850e-47 |
| Msa0443920 | Msa0795080 | 0.803259 | 3.795893e-49 | -8.615850e-47 |
| Msa0443920 | Msa0804230 | 0.805554 | 1.262201e-49 | -8.615850e-47 |
| Msa0443920 | Msa0820850 | 0.814099 | 1.830831e-51 | -8.615850e-47 |
| Msa0443920 | Msa0827040 | 0.826132 | 3.207510e-54 | -8.615850e-47 |
| Msa0443920 | Msa0840820 | 0.804639 | 1.961732e-49 | -8.615850e-47 |
| Msa0443920 | Msa0844240 | 0.800125 | 1.668591e-48 | -8.615850e-47 |
| Msa0443920 | Msa0860410 | 0.809211 | 2.116232e-50 | -8.615850e-47 |
| Msa0443920 | Msa0861130 | 0.809650 | 1.704253e-50 | -8.615850e-47 |
| Msa0443920 | Msa0876200 | 0.802398 | 5.717375e-49 | -8.615850e-47 |
| Msa0443920 | Msa0876580 | 0.822478 | 2.318033e-53 | -8.615850e-47 |
| Msa0443920 | Msa0907070 | 0.807826 | 4.181754e-50 | -8.615850e-47 |
| Msa0443920 | Msa0910980 | -0.810290 | 1.240822e-50 | -8.615850e-47 |
| Msa0443920 | Msa0930460 | -0.839628 | 1.413957e-57 | -8.615850e-47 |
| Msa0443920 | Msa0936300 | 0.817379 | 3.399922e-52 | -8.615850e-47 |
| Msa0443920 | Msa0942070 | 0.801579 | 8.422930e-49 | -8.615850e-47 |
| Msa0443920 | Msa0947660 | 0.801612 | 8.293978e-49 | -8.615850e-47 |
| Msa0443920 | Msa0961420 | -0.802120 | 6.523191e-49 | -8.615850e-47 |
| Msa0443920 | Msa0968680 | 0.800344 | 1.505939e-48 | -8.615850e-47 |
| Msa0443920 | Msa0971020 | 0.813382 | 2.633013e-51 | -8.615850e-47 |
| Msa0443920 | Msa0982270 | 0.828761 | 7.512145e-55 | -8.615850e-47 |
| Msa0443920 | Msa0990960 | 0.805836 | 1.101051e-49 | -8.615850e-47 |
| Msa0443920 | Msa0992490 | -0.831440 | 1.667765e-55 | -8.615850e-47 |
| Msa0443920 | Msa0993600 | 0.806967 | 6.359720e-50 | -8.615850e-47 |
| Msa0443920 | Msa0996170 | 0.829491 | 4.995808e-55 | -8.615850e-47 |
| Msa0443920 | Msa1006850 | 0.822194 | 2.699012e-53 | -8.615850e-47 |
| Msa0443920 | Msa1012830 | 0.827241 | 1.744135e-54 | -8.615850e-47 |
| Msa0443920 | Msa1014540 | 0.828793 | 7.378481e-55 | -8.615850e-47 |
| Msa0443920 | Msa1021540 | 0.812499 | 4.112197e-51 | -8.615850e-47 |
| Msa0443920 | Msa1027290 | 0.801688 | 8.002083e-49 | -8.615850e-47 |
| Msa0443920 | Msa1030970 | 0.817849 | 2.663679e-52 | -8.615850e-47 |
| Msa0443920 | Msa1033410 | -0.805941 | 1.046491e-49 | -8.615850e-47 |
| Msa0443920 | Msa1037700 | -0.810190 | 1.303916e-50 | -8.615850e-47 |
| Msa0443920 | Msa1039880 | 0.819025 | 1.442487e-52 | -8.615850e-47 |
| Msa0443920 | Msa1044420 | 0.815369 | 9.577437e-52 | -8.615850e-47 |
| Msa0443920 | Msa1046020 | 0.822320 | 2.523617e-53 | -8.615850e-47 |
| Msa0443920 | Msa1046060 | 0.832959 | 7.019734e-56 | -8.615850e-47 |
| Msa0443920 | Msa1046300 | 0.822527 | 2.259134e-53 | -8.615850e-47 |
| Msa0443920 | Msa1053260 | 0.815789 | 7.721721e-52 | -8.615850e-47 |
| Msa0443920 | Msa1063510 | 0.800907 | 1.156405e-48 | -8.615850e-47 |
| Msa0443920 | Msa1073070 | -0.814728 | 1.329196e-51 | -8.615850e-47 |
| Msa0443920 | Msa1075220 | -0.821568 | 3.767980e-53 | -8.615850e-47 |
| Msa0443920 | Msa1079590 | 0.809074 | 2.265139e-50 | -8.615850e-47 |
| Msa0443920 | Msa1079730 | -0.815616 | 8.437918e-52 | -8.615850e-47 |
| Msa0443920 | Msa1082500 | 0.837086 | 6.397098e-57 | -8.615850e-47 |
| Msa0443920 | Msa1085300 | 0.814749 | 1.314711e-51 | -8.615850e-47 |
| Msa0443920 | Msa1089020 | 0.811413 | 7.090258e-51 | -8.615850e-47 |
| Msa0443920 | Msa1089040 | 0.807657 | 4.541051e-50 | -8.615850e-47 |
| Msa0443920 | Msa1090260 | 0.818379 | 2.021294e-52 | -8.615850e-47 |
| Msa0443920 | Msa1091100 | 0.803827 | 2.894215e-49 | -8.615850e-47 |
| Msa0443920 | Msa1091830 | 0.803617 | 3.200586e-49 | -8.615850e-47 |
| Msa0443920 | Msa1092090 | 0.824388 | 8.293970e-54 | -8.615850e-47 |
| Msa0443920 | Msa1095480 | 0.825408 | 4.765083e-54 | -8.615850e-47 |
| Msa0443920 | Msa1097800 | 0.823219 | 1.558519e-53 | -8.615850e-47 |
| Msa0443920 | Msa1116130 | -0.837302 | 5.632293e-57 | -8.615850e-47 |
| Msa0443920 | Msa1124540 | -0.810021 | 1.417818e-50 | -8.615850e-47 |
| Msa0443920 | Msa1131220 | 0.821117 | 4.788855e-53 | -8.615850e-47 |
| Msa0443920 | Msa1139000 | -0.812428 | 4.260115e-51 | -8.615850e-47 |
| Msa0443920 | Msa1143930 | -0.839687 | 1.365032e-57 | -8.615850e-47 |
| Msa0443920 | Msa1162550 | -0.824799 | 6.636129e-54 | -8.615850e-47 |
| Msa0443920 | Msa1168040 | -0.804308 | 2.299308e-49 | -8.615850e-47 |
| Msa0443920 | Msa1171870 | 0.839128 | 1.907163e-57 | -8.615850e-47 |
| Msa0443920 | Msa1172230 | 0.803949 | 2.731012e-49 | -8.615850e-47 |
| Msa0443920 | Msa1172400 | 0.807144 | 5.834691e-50 | -8.615850e-47 |
| Msa0443920 | Msa1174040 | 0.818131 | 2.299906e-52 | -8.615850e-47 |
| Msa0443920 | Msa1179460 | 0.805279 | 1.441644e-49 | -8.615850e-47 |
| Msa0443920 | Msa1183100 | -0.811708 | 6.115072e-51 | -8.615850e-47 |
| Msa0443920 | Msa1185980 | 0.806473 | 8.086671e-50 | -8.615850e-47 |
| Msa0443920 | Msa1186950 | -0.800664 | 1.296192e-48 | -8.615850e-47 |
| Msa0443920 | Msa1197410 | 0.809419 | 1.909578e-50 | -8.615850e-47 |
| Msa0443920 | Msa1199220 | 0.810960 | 8.887712e-51 | -8.615850e-47 |
| Msa0443920 | Msa1199560 | 0.821295 | 4.355226e-53 | -8.615850e-47 |
| Msa0443920 | Msa1203250 | 0.818766 | 1.651424e-52 | -8.615850e-47 |
| Msa0443920 | Msa1205010 | -0.800984 | 1.114889e-48 | -8.615850e-47 |
| Msa0443920 | Msa1205130 | 0.814047 | 1.879278e-51 | -8.615850e-47 |
| Msa0443920 | Msa1214480 | 0.807545 | 4.798066e-50 | -8.615850e-47 |
| Msa0443920 | Msa1217430 | -0.843458 | 1.383949e-58 | -8.615850e-47 |
| Msa0443920 | Msa1217830 | 0.802633 | 5.115091e-49 | -8.615850e-47 |
| Msa0443920 | Msa1217860 | 0.810051 | 1.396640e-50 | -8.615850e-47 |
| Msa0443920 | Msa1233500 | 0.863616 | 2.191692e-64 | -8.615850e-47 |
| Msa0443920 | Msa1233890 | 0.822108 | 2.825037e-53 | -8.615850e-47 |
| Msa0443920 | Msa1240180 | 0.828330 | 9.543547e-55 | -8.615850e-47 |
| Msa0443920 | Msa1240210 | 0.831252 | 1.854912e-55 | -8.615850e-47 |
| Msa0443920 | Msa1249490 | 0.808108 | 3.642412e-50 | -8.615850e-47 |
| Msa0443920 | Msa1250890 | 0.848441 | 6.115785e-60 | -8.615850e-47 |
| Msa0443920 | Msa1259300 | 0.804651 | 1.950559e-49 | -8.615850e-47 |
| Msa0443920 | Msa1267060 | 0.826859 | 2.152153e-54 | -8.615850e-47 |
| Msa0443920 | Msa1267260 | 0.812982 | 3.222752e-51 | -8.615850e-47 |
| Msa0443920 | Msa1271210 | 0.817710 | 2.863021e-52 | -8.615850e-47 |
| Msa0443920 | Msa1275360 | 0.815556 | 8.704184e-52 | -8.615850e-47 |
| Msa0443920 | Msa1276190 | 0.800194 | 1.616095e-48 | -8.615850e-47 |
| Msa0443920 | Msa1276440 | 0.833711 | 4.558397e-56 | -8.615850e-47 |
| Msa0443920 | Msa1279210 | 0.838440 | 2.871524e-57 | -8.615850e-47 |
| Msa0443920 | Msa1289010 | 0.813173 | 2.927293e-51 | -8.615850e-47 |
| Msa0443920 | Msa1293280 | 0.819277 | 1.263620e-52 | -8.615850e-47 |
| Msa0443920 | Msa1294610 | -0.800603 | 1.334060e-48 | -8.615850e-47 |
| Msa0443920 | Msa1299180 | -0.802141 | 6.459055e-49 | -8.615850e-47 |
| Msa0443920 | Msa1300350 | -0.812064 | 5.117168e-51 | -8.615850e-47 |
| Msa0443920 | Msa1302190 | -0.851322 | 9.571312e-61 | -8.615850e-47 |
| Msa0443920 | Msa1305190 | 0.826219 | 3.058907e-54 | -8.615850e-47 |
| Msa0443920 | Msa1305340 | 0.834534 | 2.834763e-56 | -8.615850e-47 |
| Msa0443920 | Msa1306430 | 0.841839 | 3.724624e-58 | -8.615850e-47 |
| Msa0443920 | Msa1306840 | 0.802075 | 6.661788e-49 | -8.615850e-47 |
| Msa0443920 | Msa1307740 | 0.808951 | 2.405960e-50 | -8.615850e-47 |
| Msa0443920 | Msa1308380 | 0.803253 | 3.807906e-49 | -8.615850e-47 |
| Msa0443920 | Msa1314340 | 0.839511 | 1.517249e-57 | -8.615850e-47 |
| Msa0443920 | Msa1318240 | 0.801861 | 7.374482e-49 | -8.615850e-47 |
| Msa0443920 | Msa1320620 | 0.833351 | 5.607151e-56 | -8.615850e-47 |
| Msa0443920 | Msa1322190 | 0.821450 | 4.012470e-53 | -8.615850e-47 |
| Msa0443920 | Msa1327550 | 0.806096 | 9.710530e-50 | -8.615850e-47 |
| Msa0443920 | Msa1328700 | 0.830896 | 2.268417e-55 | -8.615850e-47 |
| Msa0443920 | Msa1333410 | 0.825554 | 4.399065e-54 | -8.615850e-47 |
| Msa0443920 | Msa1340650 | 0.847850 | 8.907770e-60 | -8.615850e-47 |
| Msa0443920 | Msa1343760 | 0.815516 | 8.881038e-52 | -8.615850e-47 |
| Msa0443920 | Msa1351620 | 0.832245 | 1.055258e-55 | -8.615850e-47 |
| Msa0443920 | Msa1359040 | 0.812542 | 4.022782e-51 | -8.615850e-47 |
| Msa0443920 | Msa1359650 | -0.809869 | 1.528559e-50 | -8.615850e-47 |
| Msa0443920 | Msa1362880 | 0.838999 | 2.059162e-57 | -8.615850e-47 |
| Msa0443920 | Msa1369530 | 0.826825 | 2.192615e-54 | -8.615850e-47 |
| Msa0443920 | Msa1371430 | 0.817030 | 4.074372e-52 | -8.615850e-47 |
| Msa0443920 | Msa1376890 | 0.807790 | 4.255486e-50 | -8.615850e-47 |
| Msa0443920 | Msa1384350 | 0.828398 | 9.193658e-55 | -8.615850e-47 |
| Msa0443920 | Msa1385670 | 0.820373 | 7.099232e-53 | -8.615850e-47 |
| Msa0443920 | Msa1390050 | 0.805395 | 1.363001e-49 | -8.615850e-47 |
| Msa0443920 | Msa1392260 | 0.814295 | 1.656746e-51 | -8.615850e-47 |
| Msa0443920 | Msa1395660 | 0.832204 | 1.080373e-55 | -8.615850e-47 |
| Msa0443920 | Msa1401530 | 0.821367 | 4.193043e-53 | -8.615850e-47 |
| Msa0443920 | Msa1403340 | 0.806744 | 7.087961e-50 | -8.615850e-47 |
| Msa0443920 | Msa1403580 | -0.801737 | 7.819338e-49 | -8.615850e-47 |
| Msa0443920 | Msa1410100 | 0.819404 | 1.182161e-52 | -8.615850e-47 |
| Msa0443920 | Msa1415640 | 0.812663 | 3.786129e-51 | -8.615850e-47 |
| Msa0443920 | Msa1416150 | 0.800633 | 1.315381e-48 | -8.615850e-47 |
| Msa0443920 | Msa1417830 | -0.806546 | 7.806068e-50 | -8.615850e-47 |
| Msa0443920 | Msa1424450 | 0.828108 | 1.079890e-54 | -8.615850e-47 |
| Msa0443920 | Msa1427230 | 0.801809 | 7.556634e-49 | -8.615850e-47 |
| Msa0443920 | Msa1430680 | 0.837800 | 4.198150e-57 | -8.615850e-47 |
| Msa0443920 | Msa1435370 | 0.802448 | 5.584586e-49 | -8.615850e-47 |
| Msa0443920 | Msa1438700 | 0.856105 | 4.027385e-62 | -8.615850e-47 |
| Msa0443920 | Msa1439960 | 0.807110 | 5.932610e-50 | -8.615850e-47 |
| Msa0443920 | Msa1440000 | 0.830033 | 3.688778e-55 | -8.615850e-47 |
| Msa0443920 | Msa1440910 | 0.801769 | 7.702478e-49 | -8.615850e-47 |
| Msa0443920 | Msa1441190 | 0.801787 | 7.636932e-49 | -8.615850e-47 |
| Msa0443920 | Msa1443290 | -0.807029 | 6.169347e-50 | -8.615850e-47 |
| Msa0443920 | Msa1444740 | 0.806350 | 8.585426e-50 | -8.615850e-47 |
| Msa0443920 | Msa1445420 | -0.806662 | 7.376985e-50 | -8.615850e-47 |
| Msa0443920 | Msa1445610 | -0.803763 | 2.984845e-49 | -8.615850e-47 |
| Msa0443920 | Msa1449820 | 0.807399 | 5.150598e-50 | -8.615850e-47 |
| Msa0443920 | Msa1451620 | -0.816724 | 4.771209e-52 | -8.615850e-47 |
| Msa0443920 | Msa1455490 | 0.821645 | 3.616379e-53 | -8.615850e-47 |
| Msa0443920 | Msa1460830 | 0.801312 | 9.557288e-49 | -8.615850e-47 |
| Msa0443920 | Msa1463670 | 0.822498 | 2.294237e-53 | -8.615850e-47 |
| Msa0443920 | Msa1464940 | 0.807645 | 4.569146e-50 | -8.615850e-47 |
| Msa0443920 | Msa1466300 | 0.805458 | 1.322372e-49 | -8.615850e-47 |
| Msa0239800 | Msa0443920 | 0.832598 | 8.630164e-56 | -8.615850e-47 |
| Msa0242480 | Msa0443920 | 0.805364 | 1.383233e-49 | -8.615850e-47 |
| Msa0243710 | Msa0443920 | 0.816387 | 5.676857e-52 | -8.615850e-47 |
| Msa0246430 | Msa0443920 | 0.802818 | 4.684689e-49 | -8.615850e-47 |
| Msa0258760 | Msa0443920 | 0.811010 | 8.667570e-51 | -8.615850e-47 |
| Msa0259370 | Msa0443920 | 0.805197 | 1.499175e-49 | -8.615850e-47 |
| Msa0260680 | Msa0443920 | 0.814025 | 1.900360e-51 | -8.615850e-47 |
| Msa0264930 | Msa0443920 | 0.808497 | 3.007971e-50 | -8.615850e-47 |
| Msa0265380 | Msa0443920 | 0.824052 | 9.947281e-54 | -8.615850e-47 |
| Msa0268090 | Msa0443920 | 0.812499 | 4.112319e-51 | -8.615850e-47 |
| Msa0269450 | Msa0443920 | 0.826097 | 3.270356e-54 | -8.615850e-47 |
| Msa0270220 | Msa0443920 | -0.803299 | 3.725103e-49 | -8.615850e-47 |
| Msa0277820 | Msa0443920 | 0.801072 | 1.069727e-48 | -8.615850e-47 |
| Msa0279790 | Msa0443920 | 0.810295 | 1.237569e-50 | -8.615850e-47 |
| Msa0280090 | Msa0443920 | 0.814214 | 1.726385e-51 | -8.615850e-47 |
| Msa0282250 | Msa0443920 | 0.834873 | 2.329905e-56 | -8.615850e-47 |
| Msa0287650 | Msa0443920 | 0.809790 | 1.589486e-50 | -8.615850e-47 |
| Msa0289250 | Msa0443920 | 0.808398 | 3.158768e-50 | -8.615850e-47 |
| Msa0302580 | Msa0443920 | -0.819302 | 1.247210e-52 | -8.615850e-47 |
| Msa0303360 | Msa0443920 | 0.814785 | 1.291168e-51 | -8.615850e-47 |
| Msa0306210 | Msa0443920 | -0.810684 | 1.020121e-50 | -8.615850e-47 |
| Msa0307830 | Msa0443920 | -0.811215 | 7.825542e-51 | -8.615850e-47 |
| Msa0317510 | Msa0443920 | 0.839967 | 1.154358e-57 | -8.615850e-47 |
| Msa0317720 | Msa0443920 | 0.813850 | 2.077742e-51 | -8.615850e-47 |
| Msa0317750 | Msa0443920 | 0.801377 | 9.265546e-49 | -8.615850e-47 |
| Msa0319170 | Msa0443920 | 0.835534 | 1.587077e-56 | -8.615850e-47 |
| Msa0320100 | Msa0443920 | 0.800122 | 1.671127e-48 | -8.615850e-47 |
| Msa0323080 | Msa0443920 | 0.839044 | 2.005342e-57 | -8.615850e-47 |
| Msa0326520 | Msa0443920 | 0.800725 | 1.259763e-48 | -8.615850e-47 |
| Msa0333030 | Msa0443920 | 0.804817 | 1.800463e-49 | -8.615850e-47 |
| Msa0333720 | Msa0443920 | -0.824082 | 9.785475e-54 | -8.615850e-47 |
| Msa0335040 | Msa0443920 | 0.816913 | 4.327247e-52 | -8.615850e-47 |
| Msa0336420 | Msa0443920 | 0.808230 | 3.430722e-50 | -8.615850e-47 |
| Msa0339620 | Msa0443920 | 0.800764 | 1.236412e-48 | -8.615850e-47 |
| Msa0340450 | Msa0443920 | 0.810536 | 1.097663e-50 | -8.615850e-47 |
| Msa0344830 | Msa0443920 | 0.825336 | 4.955524e-54 | -8.615850e-47 |
| Msa0344870 | Msa0443920 | 0.809888 | 1.514263e-50 | -8.615850e-47 |
| Msa0347360 | Msa0443920 | 0.812372 | 4.383569e-51 | -8.615850e-47 |
| Msa0350990 | Msa0443920 | 0.820834 | 5.562234e-53 | -8.615850e-47 |
| Msa0351030 | Msa0443920 | 0.826846 | 2.167458e-54 | -8.615850e-47 |
| Msa0351100 | Msa0443920 | 0.825044 | 5.810450e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443920 | MtrunA17_Chr3g0109561 | 97.059 | 68 | 2 | 0 | 6 | 73 | 15 | 82 | 1.42e-42 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443920 | AT4G21192.1 | 71.642 | 67 | 19 | 0 | 5 | 71 | 14 | 80 | 3.59e-32 | 106 |
| Msa0443920 | AT4G21192.2 | 71.642 | 67 | 19 | 0 | 5 | 71 | 14 | 80 | 3.59e-32 | 106 |
Find 28 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTTGATTTAACATATT+TGG | 0.039226 | 3_3:+16140522 | Msa0443920:three_prime_UTR |
| AAACATGTTCCTTCATTATC+AGG | 0.186242 | 3_3:-16140662 | None:intergenic |
| AAATTTGATTTAACATATTT+GGG | 0.189242 | 3_3:+16140523 | Msa0443920:three_prime_UTR |
| GTGCCTAAATACTAGAAATT+TGG | 0.228840 | 3_3:-16140463 | None:intergenic |
| CATCCTATTGCAAAATTCTT+TGG | 0.235808 | 3_3:+16139913 | Msa0443920:CDS |
| TACAGAATTGAAAATAAAAT+TGG | 0.247760 | 3_3:+16139942 | Msa0443920:CDS |
| CGACCAAATTTCTAGTATTT+AGG | 0.248948 | 3_3:+16140460 | Msa0443920:three_prime_UTR |
| TCAGATACCTATCATATAAT+AGG | 0.331996 | 3_3:+16140394 | Msa0443920:three_prime_UTR |
| GTGTGTGCAAGCACTATAAT+TGG | 0.371757 | 3_3:+16140563 | Msa0443920:three_prime_UTR |
| ACATCATCCTATTATATGAT+AGG | 0.400607 | 3_3:-16140401 | None:intergenic |
| CAGCAGTCAATAGAAATAGA+AGG | 0.433741 | 3_3:+16140190 | Msa0443920:exon |
| TTTATTATTATTAGATTAGA+GGG | 0.456234 | 3_3:-16140501 | None:intergenic |
| AAAGCCATTATACAAAACTA+AGG | 0.469743 | 3_3:-16140333 | None:intergenic |
| CGAGCCATTGTACAAAACTA+AGG | 0.498044 | 3_3:-16140260 | None:intergenic |
| AACATGTTCCTTCATTATCA+GGG | 0.501968 | 3_3:-16140661 | None:intergenic |
| GCATACTTTAATTCATGTTG+TGG | 0.514552 | 3_3:+16139848 | None:intergenic |
| TGACACGAGTTAGTCTTGTA+TGG | 0.542802 | 3_3:-16140594 | None:intergenic |
| GTGATTATACAAGACTAGTT+CGG | 0.549058 | 3_3:-16140438 | None:intergenic |
| ACAGAAAGCTGTGAAGAGAA+AGG | 0.562696 | 3_3:+16140100 | Msa0443920:intron |
| TGAAAAGAGCAAAGAACTCA+AGG | 0.575643 | 3_3:+16140130 | Msa0443920:CDS |
| GATACCACCCCTGATAATGA+AGG | 0.582672 | 3_3:+16140653 | Msa0443920:three_prime_UTR |
| TGTTCCTTCATTATCAGGGG+TGG | 0.590108 | 3_3:-16140657 | None:intergenic |
| TATTATTATTAGATTAGAGG+GGG | 0.596285 | 3_3:-16140499 | None:intergenic |
| AATTTGATTTAACATATTTG+GGG | 0.605428 | 3_3:+16140524 | Msa0443920:three_prime_UTR |
| TTATTATTATTAGATTAGAG+GGG | 0.611399 | 3_3:-16140500 | None:intergenic |
| ACATGTTCCTTCATTATCAG+GGG | 0.637022 | 3_3:-16140660 | None:intergenic |
| GTGGTTAATGCAGATTATCG+AGG | 0.641500 | 3_3:+16139867 | Msa0443920:CDS |
| GGAGTTTCAGAAGTGTCATG+TGG | 0.660393 | 3_3:+16139888 | Msa0443920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATTATTAGATTAGA+GGG | - | chr3_3:16140504-16140523 | None:intergenic | 10.0% |
| !!! | TTTTATTATTATTAGATTAG+AGG | - | chr3_3:16140505-16140524 | None:intergenic | 10.0% |
| !!! | AAAATTTGATTTAACATATT+TGG | + | chr3_3:16140522-16140541 | Msa0443920:three_prime_UTR | 10.0% |
| !!! | AAATTTGATTTAACATATTT+GGG | + | chr3_3:16140523-16140542 | Msa0443920:three_prime_UTR | 10.0% |
| !! | TTTATTATTATTAGATTAGA+GGG | - | chr3_3:16140504-16140523 | None:intergenic | 10.0% |
| !!! | TTTTATTATTATTAGATTAG+AGG | - | chr3_3:16140505-16140524 | None:intergenic | 10.0% |
| !!! | AAAATTTGATTTAACATATT+TGG | + | chr3_3:16140522-16140541 | Msa0443920:three_prime_UTR | 10.0% |
| !!! | AAATTTGATTTAACATATTT+GGG | + | chr3_3:16140523-16140542 | Msa0443920:three_prime_UTR | 10.0% |
| !! | TACAGAATTGAAAATAAAAT+TGG | + | chr3_3:16139942-16139961 | Msa0443920:CDS | 15.0% |
| !! | GAACTTTAACATAAAAAATA+AGG | - | chr3_3:16140021-16140040 | None:intergenic | 15.0% |
| !! | TTATTATTATTAGATTAGAG+GGG | - | chr3_3:16140503-16140522 | None:intergenic | 15.0% |
| !!! | AATTTGATTTAACATATTTG+GGG | + | chr3_3:16140524-16140543 | Msa0443920:three_prime_UTR | 15.0% |
| !! | TACAGAATTGAAAATAAAAT+TGG | + | chr3_3:16139942-16139961 | Msa0443920:CDS | 15.0% |
| !! | GAACTTTAACATAAAAAATA+AGG | - | chr3_3:16140021-16140040 | None:intergenic | 15.0% |
| !! | TTATTATTATTAGATTAGAG+GGG | - | chr3_3:16140503-16140522 | None:intergenic | 15.0% |
| !!! | AATTTGATTTAACATATTTG+GGG | + | chr3_3:16140524-16140543 | Msa0443920:three_prime_UTR | 15.0% |
| !! | ATGGAAAAAATTGATACATA+TGG | - | chr3_3:16140299-16140318 | None:intergenic | 20.0% |
| !! | TATTATTATTAGATTAGAGG+GGG | - | chr3_3:16140502-16140521 | None:intergenic | 20.0% |
| !! | ATGGAAAAAATTGATACATA+TGG | - | chr3_3:16140299-16140318 | None:intergenic | 20.0% |
| !! | TATTATTATTAGATTAGAGG+GGG | - | chr3_3:16140502-16140521 | None:intergenic | 20.0% |
| !! | TAAGGATTGTATTTTGCAAA+TGG | - | chr3_3:16140318-16140337 | None:intergenic | 25.0% |
| !!! | CAATCCTTAGTTTTGTATAA+TGG | + | chr3_3:16140329-16140348 | Msa0443920:three_prime_UTR | 25.0% |
| ! | AAAGCCATTATACAAAACTA+AGG | - | chr3_3:16140336-16140355 | None:intergenic | 25.0% |
| ! | TCAGATACCTATCATATAAT+AGG | + | chr3_3:16140394-16140413 | Msa0443920:three_prime_UTR | 25.0% |
| ! | ACATCATCCTATTATATGAT+AGG | - | chr3_3:16140404-16140423 | None:intergenic | 25.0% |
| !! | TAAGGATTGTATTTTGCAAA+TGG | - | chr3_3:16140318-16140337 | None:intergenic | 25.0% |
| !!! | CAATCCTTAGTTTTGTATAA+TGG | + | chr3_3:16140329-16140348 | Msa0443920:three_prime_UTR | 25.0% |
| ! | AAAGCCATTATACAAAACTA+AGG | - | chr3_3:16140336-16140355 | None:intergenic | 25.0% |
| ! | TCAGATACCTATCATATAAT+AGG | + | chr3_3:16140394-16140413 | Msa0443920:three_prime_UTR | 25.0% |
| ! | ACATCATCCTATTATATGAT+AGG | - | chr3_3:16140404-16140423 | None:intergenic | 25.0% |
| CATCCTATTGCAAAATTCTT+TGG | + | chr3_3:16139913-16139932 | Msa0443920:CDS | 30.0% | |
| AGATGAAAATTACTTACCAC+AGG | - | chr3_3:16140070-16140089 | None:intergenic | 30.0% | |
| ! | TTCTTTGCTCTTTTCAAAGT+TGG | - | chr3_3:16140126-16140145 | None:intergenic | 30.0% |
| !!! | CAATCCTTAGTTTTGTACAA+TGG | + | chr3_3:16140256-16140275 | Msa0443920:three_prime_UTR | 30.0% |
| ! | GTGATTATACAAGACTAGTT+CGG | - | chr3_3:16140441-16140460 | None:intergenic | 30.0% |
| !! | CGACCAAATTTCTAGTATTT+AGG | + | chr3_3:16140460-16140479 | Msa0443920:three_prime_UTR | 30.0% |
| GTGCCTAAATACTAGAAATT+TGG | - | chr3_3:16140466-16140485 | None:intergenic | 30.0% | |
| AACATGTTCCTTCATTATCA+GGG | - | chr3_3:16140664-16140683 | None:intergenic | 30.0% | |
| AAACATGTTCCTTCATTATC+AGG | - | chr3_3:16140665-16140684 | None:intergenic | 30.0% | |
| CATCCTATTGCAAAATTCTT+TGG | + | chr3_3:16139913-16139932 | Msa0443920:CDS | 30.0% | |
| AGATGAAAATTACTTACCAC+AGG | - | chr3_3:16140070-16140089 | None:intergenic | 30.0% | |
| ! | TTCTTTGCTCTTTTCAAAGT+TGG | - | chr3_3:16140126-16140145 | None:intergenic | 30.0% |
| !!! | CAATCCTTAGTTTTGTACAA+TGG | + | chr3_3:16140256-16140275 | Msa0443920:three_prime_UTR | 30.0% |
| ! | GTGATTATACAAGACTAGTT+CGG | - | chr3_3:16140441-16140460 | None:intergenic | 30.0% |
| !! | CGACCAAATTTCTAGTATTT+AGG | + | chr3_3:16140460-16140479 | Msa0443920:three_prime_UTR | 30.0% |
| GTGCCTAAATACTAGAAATT+TGG | - | chr3_3:16140466-16140485 | None:intergenic | 30.0% | |
| AACATGTTCCTTCATTATCA+GGG | - | chr3_3:16140664-16140683 | None:intergenic | 30.0% | |
| AAACATGTTCCTTCATTATC+AGG | - | chr3_3:16140665-16140684 | None:intergenic | 30.0% | |
| ! | TCGCCAAAGAATTTTGCAAT+AGG | - | chr3_3:16139919-16139938 | None:intergenic | 35.0% |
| !! | CTTTGCTTTGAAGTTTGATC+TGG | + | chr3_3:16140040-16140059 | Msa0443920:intron | 35.0% |
| TGAAAAGAGCAAAGAACTCA+AGG | + | chr3_3:16140130-16140149 | Msa0443920:CDS | 35.0% | |
| ! | AGGAACAATTGCGAGTTTTA+AGG | + | chr3_3:16140150-16140169 | Msa0443920:CDS | 35.0% |
| CAGCAGTCAATAGAAATAGA+AGG | + | chr3_3:16140190-16140209 | Msa0443920:exon | 35.0% | |
| ACATGTTCCTTCATTATCAG+GGG | - | chr3_3:16140663-16140682 | None:intergenic | 35.0% | |
| ! | TCGCCAAAGAATTTTGCAAT+AGG | - | chr3_3:16139919-16139938 | None:intergenic | 35.0% |
| !! | CTTTGCTTTGAAGTTTGATC+TGG | + | chr3_3:16140040-16140059 | Msa0443920:intron | 35.0% |
| TGAAAAGAGCAAAGAACTCA+AGG | + | chr3_3:16140130-16140149 | Msa0443920:CDS | 35.0% | |
| ! | AGGAACAATTGCGAGTTTTA+AGG | + | chr3_3:16140150-16140169 | Msa0443920:CDS | 35.0% |
| CAGCAGTCAATAGAAATAGA+AGG | + | chr3_3:16140190-16140209 | Msa0443920:exon | 35.0% | |
| ACATGTTCCTTCATTATCAG+GGG | - | chr3_3:16140663-16140682 | None:intergenic | 35.0% | |
| GTGGTTAATGCAGATTATCG+AGG | + | chr3_3:16139867-16139886 | Msa0443920:CDS | 40.0% | |
| !!! | AGTTTGATCTGGTTTTCCTG+TGG | + | chr3_3:16140051-16140070 | Msa0443920:intron | 40.0% |
| TTCTCTTCACAGCTTTCTGT+TGG | - | chr3_3:16140100-16140119 | None:intergenic | 40.0% | |
| ACAGAAAGCTGTGAAGAGAA+AGG | + | chr3_3:16140100-16140119 | Msa0443920:intron | 40.0% | |
| CGAGCCATTGTACAAAACTA+AGG | - | chr3_3:16140263-16140282 | None:intergenic | 40.0% | |
| GTGTGTGCAAGCACTATAAT+TGG | + | chr3_3:16140563-16140582 | Msa0443920:three_prime_UTR | 40.0% | |
| !! | TGACACGAGTTAGTCTTGTA+TGG | - | chr3_3:16140597-16140616 | None:intergenic | 40.0% |
| GTGGTTAATGCAGATTATCG+AGG | + | chr3_3:16139867-16139886 | Msa0443920:CDS | 40.0% | |
| !!! | AGTTTGATCTGGTTTTCCTG+TGG | + | chr3_3:16140051-16140070 | Msa0443920:intron | 40.0% |
| TTCTCTTCACAGCTTTCTGT+TGG | - | chr3_3:16140100-16140119 | None:intergenic | 40.0% | |
| ACAGAAAGCTGTGAAGAGAA+AGG | + | chr3_3:16140100-16140119 | Msa0443920:intron | 40.0% | |
| CGAGCCATTGTACAAAACTA+AGG | - | chr3_3:16140263-16140282 | None:intergenic | 40.0% | |
| GTGTGTGCAAGCACTATAAT+TGG | + | chr3_3:16140563-16140582 | Msa0443920:three_prime_UTR | 40.0% | |
| !! | TGACACGAGTTAGTCTTGTA+TGG | - | chr3_3:16140597-16140616 | None:intergenic | 40.0% |
| !! | GGAGTTTCAGAAGTGTCATG+TGG | + | chr3_3:16139888-16139907 | Msa0443920:CDS | 45.0% |
| ! | GATACCACCCCTGATAATGA+AGG | + | chr3_3:16140653-16140672 | Msa0443920:three_prime_UTR | 45.0% |
| TGTTCCTTCATTATCAGGGG+TGG | - | chr3_3:16140660-16140679 | None:intergenic | 45.0% | |
| !! | GGAGTTTCAGAAGTGTCATG+TGG | + | chr3_3:16139888-16139907 | Msa0443920:CDS | 45.0% |
| ! | GATACCACCCCTGATAATGA+AGG | + | chr3_3:16140653-16140672 | Msa0443920:three_prime_UTR | 45.0% |
| TGTTCCTTCATTATCAGGGG+TGG | - | chr3_3:16140660-16140679 | None:intergenic | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 16139862 | 16140688 | 16139862 | ID=Msa0443920;Name=Msa0443920 |
| chr3_3 | mRNA | 16139862 | 16140688 | 16139862 | ID=Msa0443920-mRNA-1;Parent=Msa0443920;Name=Msa0443920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|486|73 |
| chr3_3 | exon | 16139862 | 16139984 | 16139862 | ID=Msa0443920-mRNA-1:exon:3409;Parent=Msa0443920-mRNA-1 |
| chr3_3 | exon | 16140104 | 16140688 | 16140104 | ID=Msa0443920-mRNA-1:exon:3410;Parent=Msa0443920-mRNA-1 |
| chr3_3 | CDS | 16139862 | 16139984 | 16139862 | ID=Msa0443920-mRNA-1:cds;Parent=Msa0443920-mRNA-1 |
| chr3_3 | CDS | 16140104 | 16140202 | 16140104 | ID=Msa0443920-mRNA-1:cds;Parent=Msa0443920-mRNA-1 |
| chr3_3 | three_prime_UTR | 16140203 | 16140688 | 16140203 | ID=Msa0443920-mRNA-1:three_prime_utr;Parent=Msa0443920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
