AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0788070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788070 MtrunA17_Chr5g0446841 94.632 801 15 1 1 801 1 773 0.0 1511
Msa0788070 MtrunA17_Chr5g0429151 35.165 910 429 29 9 801 3 868 4.91e-108 350
Msa0788070 MtrunA17_Chr8g0343521 59.155 71 27 2 6 76 9 77 1.76e-17 87.4
Msa0788070 MtrunA17_Chr8g0343521 31.356 236 122 14 593 801 784 1006 4.83e-11 66.6
Msa0788070 MtrunA17_Chr8g0380271 41.758 91 47 3 1 89 1 87 2.75e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788070 AT3G07660.1 36.550 487 214 16 399 801 366 841 1.67e-60 220
Msa0788070 AT3G07660.1 40.650 123 73 0 9 131 3 125 1.11e-18 91.7
Msa0788070 AT3G13222.1 44.366 142 65 3 5 145 3 131 8.22e-29 122
Msa0788070 AT3G13222.1 28.502 414 192 17 399 801 247 567 7.06e-15 79.0
Msa0788070 AT1G55820.1 46.043 139 61 5 9 147 6 130 3.41e-26 114
Msa0788070 AT1G55820.1 31.469 429 215 16 401 801 198 575 2.67e-25 111
Msa0788070 AT3G13990.2 28.070 285 166 10 1 271 2 261 4.64e-14 76.6
Msa0788070 AT3G13990.1 28.070 285 166 10 1 271 2 261 4.64e-14 76.6
Msa0788070 AT4G18150.1 36.029 136 70 6 7 130 2 132 1.21e-12 72.0

Find 263 sgRNAs with CRISPR-Local

Find 640 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCCATCTCCTCAATTTC+TGG 0.113744 5_2:-74381263 Msa0788070:CDS
ACTCAAAAGCTTCTCTATTT+AGG 0.177667 5_2:-74384727 Msa0788070:intron
CCAGCCGCGGCTGCAGCTGC+TGG 0.207112 5_2:-74377663 Msa0788070:CDS
GTGGTGGTGGTGGCGGGTCT+AGG 0.212056 5_2:-74384873 Msa0788070:CDS
TGCATTGGAGACAGGTAAAT+TGG 0.214964 5_2:+74377744 None:intergenic
CTCCGTGAGCAGCCTGTGTC+TGG 0.219809 5_2:+74377115 None:intergenic
CACTGCAGTATCTTCATTTC+CGG 0.236484 5_2:+74377503 None:intergenic
AATTTCATGTCTACCATGTT+AGG 0.248936 5_2:-74379029 Msa0788070:CDS
TTGAATTATACTGTTCTATA+TGG 0.260184 5_2:-74376543 Msa0788070:three_prime_UTR
GCTGGGCCAAATCATGTTAA+AGG 0.261520 5_2:-74381530 Msa0788070:CDS
GCAACAACTACATGTTTCTA+AGG 0.270655 5_2:+74376691 None:intergenic
AAGTCTGGTCACGGTTCTTC+TGG 0.281009 5_2:-74381854 Msa0788070:CDS
GGCCGCGGTGGTGGTGGTGG+CGG 0.286927 5_2:-74384880 Msa0788070:CDS
CACCGCCAACACCAGGAATC+TGG 0.293289 5_2:+74381588 None:intergenic
TGAAGGGTGCTGCTAGTTGC+AGG 0.295395 5_2:-74376774 Msa0788070:three_prime_UTR
CGGGTTGCTTGTTGAATTCA+TGG 0.297959 5_2:+74381451 None:intergenic
TTTGACTTTGGTATTGCATT+CGG 0.304863 5_2:+74381431 None:intergenic
CAAGTGCCTGAGGCTTTAAA+AGG 0.306095 5_2:-74380739 Msa0788070:CDS
TTGTTTCCTTTAACATGATT+TGG 0.306784 5_2:+74381524 None:intergenic
CTTCCTATTCGAAGGGAAAA+TGG 0.306891 5_2:-74382479 Msa0788070:CDS
CAGCAGTCTCAAGCTGTCGC+TGG 0.314498 5_2:-74377036 Msa0788070:CDS
GCATTCACTGAAGAAGATTC+AGG 0.317221 5_2:+74380628 None:intergenic
GTTCAAAGTGCTCAAAACTA+TGG 0.320477 5_2:-74379056 Msa0788070:CDS
ATCTCCTCAATTTCTGGTTT+AGG 0.328781 5_2:-74381257 Msa0788070:intron
CCATCTATCTCCCAGATTCC+TGG 0.331270 5_2:-74381599 Msa0788070:CDS
CTGTAGAGGTGGAGTTGGGC+TGG 0.331789 5_2:+74377854 None:intergenic
GGCTATTCCTCAAACTTTCC+TGG 0.336120 5_2:-74382976 Msa0788070:intron
AACATGTAGTTGTTGCTATA+AGG 0.340815 5_2:-74376684 Msa0788070:three_prime_UTR
TCGCTCCAGCCTTGAATTGC+GGG 0.342458 5_2:+74377625 None:intergenic
ATTTGAGGGTAGTGAGCTTC+AGG 0.344869 5_2:-74378991 Msa0788070:CDS
AAATTACAACCTTGAGGCTT+GGG 0.350670 5_2:+74382382 None:intergenic
CCAGCAGCTGCAGCCGCGGC+TGG 0.355020 5_2:+74377663 None:intergenic
TTAAAAGGTGGTCTGACATT+TGG 0.355222 5_2:-74380724 Msa0788070:CDS
GGCTCATATTGGAATTCCTT+CGG 0.356484 5_2:-74377589 Msa0788070:CDS
TGGAGCGAACACAGGAAATA+TGG 0.359123 5_2:-74377610 Msa0788070:CDS
TGCTAGATGGTGGTGGTGGT+GGG 0.362600 5_2:-74382508 Msa0788070:intron
AGGCCAGTGTTCATTCTTCA+TGG 0.365615 5_2:+74376873 None:intergenic
ATCAAGATGATCTCCGTGTT+CGG 0.367141 5_2:+74379214 None:intergenic
CCTAGTCCGACTGTGAATAC+TGG 0.367560 5_2:-74377534 Msa0788070:CDS
TTGACTTTGGTATTGCATTC+GGG 0.371451 5_2:+74381432 None:intergenic
GCACTTTGAACAGTCAGAAT+TGG 0.377482 5_2:+74379068 None:intergenic
ATTTCTTTATAAGATTTAAC+AGG 0.377750 5_2:+74381300 None:intergenic
ATGCTGAAACTGTTAATTCA+AGG 0.379384 5_2:-74380609 Msa0788070:intron
AGCGGCGGCCGCGGTGGTGG+TGG 0.379951 5_2:-74384886 Msa0788070:CDS
GCATTGGAGACAGGTAAATT+GGG 0.381244 5_2:+74377745 None:intergenic
ACAGGAAATATGGCTCATAT+TGG 0.381667 5_2:-74377600 Msa0788070:CDS
CACCAACTCTATTGAACTCT+TGG 0.383167 5_2:+74376629 None:intergenic
TTGCTAGATGGTGGTGGTGG+TGG 0.383397 5_2:-74382509 Msa0788070:intron
GCCGCGGTGGTGGTGGTGGC+GGG 0.386945 5_2:-74384879 Msa0788070:CDS
GTTGTCCAGTTGTGTAGATC+TGG 0.392117 5_2:+74377463 None:intergenic
TTTATAAGATTTAACAGGTA+TGG 0.399076 5_2:+74381305 None:intergenic
TCAGGCACTTGGAAATGGTT+TGG 0.399267 5_2:+74380751 None:intergenic
GAAACGGGCTGTGGAGAAAC+AGG 0.403673 5_2:+74377822 None:intergenic
AAGCCTCAGGCACTTGGAAA+TGG 0.404582 5_2:+74380746 None:intergenic
GTTCCCTCTCCCGCAATTCA+AGG 0.408553 5_2:-74377634 Msa0788070:CDS
TTCCTCTTCAGATCCTGTGC+TGG 0.408962 5_2:-74381624 Msa0788070:CDS
GTTGCAAACCGGACATATCT+TGG 0.409196 5_2:+74377187 None:intergenic
TCTGAAGGCATATCTATAAC+TGG 0.409197 5_2:-74379149 Msa0788070:CDS
TCAAGATGATCTCCGTGTTC+GGG 0.409737 5_2:+74379215 None:intergenic
CTTTCAACTTCATTTGACTT+TGG 0.410792 5_2:+74381419 None:intergenic
CAAATGAAGTTGAAAGTAAC+CGG 0.414132 5_2:-74381412 Msa0788070:CDS
AGGTGGTTGGCTAACGCAAC+TGG 0.415387 5_2:+74381346 None:intergenic
GGCGGCCGCGGTGGTGGTGG+TGG 0.416006 5_2:-74384883 Msa0788070:CDS
GCTCATATTGGAATTCCTTC+GGG 0.416308 5_2:-74377588 Msa0788070:CDS
GATCTACACAACTGGACAAC+TGG 0.418532 5_2:-74377460 Msa0788070:intron
GTTCGGGCAATGGCACGCTT+TGG 0.419058 5_2:+74379231 None:intergenic
TGTAGAGGTGGAGTTGGGCT+GGG 0.425157 5_2:+74377855 None:intergenic
ATGAGCGGCGGCCGCGGTGG+TGG 0.430580 5_2:-74384889 Msa0788070:CDS
CATTGTAGGGATTGAGCAGC+AGG 0.430709 5_2:-74383062 Msa0788070:intron
GCTGCTCACGGAGCATTTCC+CGG 0.434441 5_2:-74377105 Msa0788070:CDS
AATCAATCCAATGGGAAGTC+TGG 0.436871 5_2:-74381869 Msa0788070:CDS
GAAAACCAGATCTACACAAC+TGG 0.437940 5_2:-74377468 Msa0788070:CDS
GGCGGGCCTACAGTTTCAAC+AGG 0.437990 5_2:+74377012 None:intergenic
CAGCCGCGGCTGCAGCTGCT+GGG 0.442511 5_2:-74377662 Msa0788070:CDS
CAACACTACCTATGAGAGAT+TGG 0.442663 5_2:+74381831 None:intergenic
CAGCTTGAGACTGCTGCAAA+AGG 0.443273 5_2:+74377043 None:intergenic
GAAATTACAACCTTGAGGCT+TGG 0.445152 5_2:+74382381 None:intergenic
AGTTGAGACCTCTGTGACAT+TGG 0.448927 5_2:+74380822 None:intergenic
GACTGCTGCAAAAGGGTAGA+AGG 0.449419 5_2:+74377051 None:intergenic
AGCTCTGTAGAGGTGGAGTT+GGG 0.449566 5_2:+74377850 None:intergenic
GTTAACAATACCTCCTGCTT+TGG 0.450263 5_2:+74379104 None:intergenic
TACCGCCTTCTCAGATCAAT+TGG 0.451052 5_2:-74376969 Msa0788070:CDS
AAAATTGATGCATTGGAGAC+AGG 0.452279 5_2:+74377736 None:intergenic
CTGCCCTGGTTGATAGATAC+CGG 0.454716 5_2:+74377086 None:intergenic
TGGTGGTGGTGGCGGGTCTA+GGG 0.455666 5_2:-74384872 Msa0788070:CDS
TCCGTGAGCAGCCTGTGTCT+GGG 0.456000 5_2:+74377116 None:intergenic
TGTTATTTACACTTCAGATC+AGG 0.456134 5_2:+74376853 None:intergenic
TAGAAGCTGAACTGCTTTGT+GGG 0.456515 5_2:+74381801 None:intergenic
GGATTGATTTGCAGCACTAC+GGG 0.459068 5_2:+74381883 None:intergenic
GCTATCAAAATGTAGTATAC+AGG 0.460500 5_2:+74376574 None:intergenic
CCAGTATTCACAGTCGGACT+AGG 0.461215 5_2:+74377534 None:intergenic
TTAGAAGCTGAACTGCTTTG+TGG 0.462040 5_2:+74381800 None:intergenic
GTTGCAAGGGCTCAGATAAC+CGG 0.463340 5_2:+74381393 None:intergenic
ATTGCAGACTGCAAGTTCTC+AGG 0.466939 5_2:-74377886 Msa0788070:intron
CCAGCTAACTTCTTCCCATA+TGG 0.466958 5_2:-74377780 Msa0788070:CDS
TAGATCAAAACAACGTGGAC+AGG 0.467933 5_2:-74383025 Msa0788070:CDS
TTCCGTACATTGTTGGGGAT+CGG 0.469554 5_2:+74384847 None:intergenic
CTATATAACCTTGCCCCTCA+AGG 0.469727 5_2:-74377156 Msa0788070:CDS
GGGAGTGACCGGATATCTGC+TGG 0.471503 5_2:-74381548 Msa0788070:CDS
ATTTCATGTCTACCATGTTA+GGG 0.475944 5_2:-74379028 Msa0788070:CDS
AGCAGTCTCAAGCTGTCGCT+GGG 0.477878 5_2:-74377035 Msa0788070:CDS
CCATATGGGAAGAAGTTAGC+TGG 0.481888 5_2:+74377780 None:intergenic
TTCCCTCAACAGCCATCAGC+TGG 0.482033 5_2:-74377699 Msa0788070:CDS
CCAGCCTTGAATTGCGGGAG+AGG 0.483908 5_2:+74377630 None:intergenic
CCAGGAATCTGGGAGATAGA+TGG 0.484625 5_2:+74381599 None:intergenic
TTCGCTCCAGCCTTGAATTG+CGG 0.486110 5_2:+74377624 None:intergenic
TGGTGGCCTAAAATAAGAAA+CGG 0.489748 5_2:+74377806 None:intergenic
TGGATTGATTTGCAGCACTA+CGG 0.490684 5_2:+74381882 None:intergenic
GTGAATACTGGAAGCTCTGC+CGG 0.492892 5_2:-74377522 Msa0788070:CDS
TCCCAGATTCCTGGTGTTGG+CGG 0.494415 5_2:-74381590 Msa0788070:CDS
GATTTGGCCCAGCAGATATC+CGG 0.495485 5_2:+74381540 None:intergenic
GAGCTCTGTAGAGGTGGAGT+TGG 0.496736 5_2:+74377849 None:intergenic
GTCAGAATTGGATGGCCCTC+GGG 0.498580 5_2:+74379080 None:intergenic
GAAAGAATGAGCGGCGGCCG+CGG 0.501038 5_2:-74384895 Msa0788070:exon
CATGTTTGATTCTTTAAGAA+CGG 0.501860 5_2:+74384765 None:intergenic
TGGCTTAGTATAATATCATC+AGG 0.502004 5_2:+74376649 None:intergenic
GGACCCGGACTTATCATTCT+CGG 0.502645 5_2:+74381472 None:intergenic
TTGGTCAGTTCTTGTAATTG+AGG 0.502651 5_2:+74381700 None:intergenic
AGTTCTTGTAATTGAGGCAA+AGG 0.505006 5_2:+74381706 None:intergenic
ATCTCCCAGATTCCTGGTGT+TGG 0.505270 5_2:-74381593 Msa0788070:CDS
CTCTTGCTAGATGGTGGTGG+TGG 0.506078 5_2:-74382512 Msa0788070:intron
GGTGCTGTCAGTAGGGAAGT+AGG 0.506343 5_2:-74381569 Msa0788070:CDS
AAAACAACGTGGACAGGGGA+GGG 0.506744 5_2:-74383019 Msa0788070:CDS
GAGATAGATGGTGCCAGCAC+AGG 0.507181 5_2:+74381611 None:intergenic
TCAACATCAAATTTCTGTAC+CGG 0.510047 5_2:-74381654 Msa0788070:CDS
AAGGTGAGATGTTGCCCTTG+AGG 0.511656 5_2:+74377141 None:intergenic
TCTTCTGGCCAATCTCTCAT+AGG 0.512504 5_2:-74381839 Msa0788070:CDS
AGGTGAGATGTTGCCCTTGA+GGG 0.513539 5_2:+74377142 None:intergenic
GCTGATAAGATCCTGGAGGC+GGG 0.514023 5_2:+74376995 None:intergenic
TAGAGAATTAAGTTGCAAAC+CGG 0.515652 5_2:+74377176 None:intergenic
CCTCTCCCGCAATTCAAGGC+TGG 0.516531 5_2:-74377630 Msa0788070:CDS
CCGTGAGCAGCCTGTGTCTG+GGG 0.517112 5_2:+74377117 None:intergenic
GATCCCAGCAGCTGCAGCCG+CGG 0.517466 5_2:+74377659 None:intergenic
TAAACCAGAAATTGAGGAGA+TGG 0.517595 5_2:+74381259 None:intergenic
AAAGATTGAGCAGCCAAAGC+AGG 0.517956 5_2:-74379117 Msa0788070:CDS
AAACAACGTGGACAGGGGAG+GGG 0.518758 5_2:-74383018 Msa0788070:CDS
TTCCGATCCCCAACAATGTA+CGG 0.520407 5_2:-74384849 Msa0788070:CDS
ATTGAGGCAAAGGTTTGAGT+AGG 0.520561 5_2:+74381716 None:intergenic
GGACTAGGAGCATATCCAAC+AGG 0.520833 5_2:+74377549 None:intergenic
GCATCCGAGAATGATAAGTC+CGG 0.521679 5_2:-74381476 Msa0788070:CDS
GGTGGCCTAAAATAAGAAAC+GGG 0.522599 5_2:+74377807 None:intergenic
ACTCAGCAAGTTCAATTTGA+GGG 0.523341 5_2:-74379005 Msa0788070:CDS
CAACAACTACATGTTTCTAA+GGG 0.523616 5_2:+74376692 None:intergenic
ACCGCCAACACCAGGAATCT+GGG 0.523803 5_2:+74381589 None:intergenic
ATTGAGCAGCAGGGTTTCTG+AGG 0.524138 5_2:-74383052 Msa0788070:CDS
GGAAACAAACTTGAAGAAGC+TGG 0.524687 5_2:-74381509 Msa0788070:CDS
GGGAAGAAGTTAGCTGGGTA+TGG 0.526076 5_2:+74377786 None:intergenic
TGCTGATAAGATCCTGGAGG+CGG 0.526275 5_2:+74376994 None:intergenic
TGATCTCCGTGTTCGGGCAA+TGG 0.526759 5_2:+74379221 None:intergenic
AAACTTTACCTTGAGGTGGT+TGG 0.528234 5_2:+74381333 None:intergenic
GTGTTGGCGGTGCTGTCAGT+AGG 0.529908 5_2:-74381577 Msa0788070:CDS
AGAATGAGCGGCGGCCGCGG+TGG 0.530461 5_2:-74384892 Msa0788070:CDS
GATCTCTCTGATGTCGTGGA+TGG 0.534492 5_2:+74384822 None:intergenic
CCCCAGACACAGGCTGCTCA+CGG 0.537435 5_2:-74377117 Msa0788070:CDS
GAAACTGTAGGCCCGCCTCC+AGG 0.540189 5_2:-74377006 Msa0788070:CDS
CTAAAATAAGAAACGGGCTG+TGG 0.541113 5_2:+74377813 None:intergenic
GAATTCCAATTGATCTGAGA+AGG 0.541172 5_2:+74376964 None:intergenic
AGTCAGAATTGGATGGCCCT+CGG 0.541571 5_2:+74379079 None:intergenic
AAAGGTTTGAGTAGGAGAAG+TGG 0.542499 5_2:+74381724 None:intergenic
AATATCATCAGGAATTACTA+AGG 0.542667 5_2:+74376660 None:intergenic
GACTCAGCAAGTTCAATTTG+AGG 0.543960 5_2:-74379006 Msa0788070:CDS
GTGCTGCAAATCAATCCAAT+GGG 0.544641 5_2:-74381877 Msa0788070:CDS
AAATGTACCAGGAAAGTTTG+AGG 0.546172 5_2:+74382969 None:intergenic
TCATATATCACTCCACCTGT+TGG 0.546789 5_2:-74377564 Msa0788070:CDS
TTGCCAGCTGATGGCTGTTG+AGG 0.547973 5_2:+74377696 None:intergenic
GATGTTGCCCTTGAGGGGCA+AGG 0.549942 5_2:+74377148 None:intergenic
GAGTTCTCTCTGCAATGTGA+TGG 0.550044 5_2:+74382453 None:intergenic
AGCCAAGAGTTCAATAGAGT+TGG 0.550760 5_2:-74376631 Msa0788070:three_prime_UTR
CAAAACAACGTGGACAGGGG+AGG 0.551743 5_2:-74383020 Msa0788070:CDS
GCTGGGCCTGTTGAAACTGT+AGG 0.551856 5_2:-74377018 Msa0788070:CDS
CGGTGATCTCTCTGATGTCG+TGG 0.555061 5_2:+74384818 None:intergenic
AGCTTGAGACTGCTGCAAAA+GGG 0.555438 5_2:+74377044 None:intergenic
GCTTGTTGAATTCATGGACC+CGG 0.556640 5_2:+74381457 None:intergenic
GAGGAACTTACAACAAAGGA+AGG 0.557950 5_2:+74378948 None:intergenic
AGTGCTGCAAATCAATCCAA+TGG 0.560942 5_2:-74381878 Msa0788070:CDS
GTAGGGAAGTAGGGAGTGAC+CGG 0.561882 5_2:-74381559 Msa0788070:CDS
CAACATCAAATTTCTGTACC+GGG 0.562172 5_2:-74381653 Msa0788070:CDS
CTGTAAATCTGGCTGAGTAG+AGG 0.562674 5_2:+74382424 None:intergenic
AAACCGGACATATCTTGGCC+TGG 0.562751 5_2:+74377192 None:intergenic
GGAGGAACCTTCCTATTCGA+AGG 0.562842 5_2:-74382487 Msa0788070:CDS
GTGCTGTCAGTAGGGAAGTA+GGG 0.563373 5_2:-74381568 Msa0788070:CDS
TTCAAGGCTGGAGCGAACAC+AGG 0.563651 5_2:-74377618 Msa0788070:CDS
GGTAGCTGCTGATAAGATCC+TGG 0.567965 5_2:+74376988 None:intergenic
CTCAACTCAGTTGACTGCAC+AGG 0.568411 5_2:+74380790 None:intergenic
GCACCAGGCCAAGATATGTC+CGG 0.568756 5_2:-74377195 Msa0788070:CDS
CGTTCTTAAAGAATCAAACA+TGG 0.570146 5_2:-74384764 Msa0788070:CDS
ACTGAAGAAGATTCAGGAGT+GGG 0.570709 5_2:+74380634 None:intergenic
GGTATAGAGCTCTGTAGAGG+TGG 0.570730 5_2:+74377843 None:intergenic
CCTACCTAAACCAGAAATTG+AGG 0.571437 5_2:+74381253 None:intergenic
CGTGAGCAGCCTGTGTCTGG+GGG 0.572469 5_2:+74377118 None:intergenic
CAGCCTTGAATTGCGGGAGA+GGG 0.573024 5_2:+74377631 None:intergenic
TGCCAGCTGATGGCTGTTGA+GGG 0.575376 5_2:+74377697 None:intergenic
GGACAGGGGAGGGGAGCAAG+AGG 0.576708 5_2:-74383009 Msa0788070:CDS
TATATAACCTTGCCCCTCAA+GGG 0.576839 5_2:-74377155 Msa0788070:CDS
AACAACTACATGTTTCTAAG+GGG 0.576952 5_2:+74376693 None:intergenic
CTGACAGCACCGCCAACACC+AGG 0.577823 5_2:+74381581 None:intergenic
ATGCAGCACCCCAAGCCTCA+AGG 0.578939 5_2:-74382391 Msa0788070:intron
AGCGTGCCATTGCCCGAACA+CGG 0.582012 5_2:-74379227 Msa0788070:CDS
CATCCGAGAATGATAAGTCC+GGG 0.582263 5_2:-74381475 Msa0788070:CDS
AGATCAAAACAACGTGGACA+GGG 0.589207 5_2:-74383024 Msa0788070:CDS
GGAGGTATTGTTAACTCCCG+AGG 0.592527 5_2:-74379096 Msa0788070:CDS
GGTGAAGTTACTGTCTGCCC+TGG 0.598871 5_2:+74377072 None:intergenic
AAAGAGACACTAGCTTCTGA+AGG 0.599821 5_2:-74379164 Msa0788070:CDS
AAGAAGTTAGCTGGGTATGG+TGG 0.600041 5_2:+74377789 None:intergenic
TTTCCCGGTATCTATCAACC+AGG 0.601306 5_2:-74377090 Msa0788070:CDS
AACGGAGAAGATTTCGTCGT+CGG 0.601528 5_2:+74384783 None:intergenic
AAACCATTTCCAAGTGCCTG+AGG 0.602183 5_2:-74380749 Msa0788070:CDS
AATTACAACCTTGAGGCTTG+GGG 0.602227 5_2:+74382383 None:intergenic
TGCCCTGGTTGATAGATACC+GGG 0.602438 5_2:+74377087 None:intergenic
AGATACATGTTGCCAGCTGA+TGG 0.604442 5_2:+74377687 None:intergenic
TGCGTTAGCCAACCACCTCA+AGG 0.605206 5_2:-74381341 Msa0788070:CDS
TCCAATGGGAAGTCTGGTCA+CGG 0.605345 5_2:-74381863 Msa0788070:CDS
CATATGGGAAGAAGTTAGCT+GGG 0.606074 5_2:+74377781 None:intergenic
TTTGAACAGTCAGAATTGGA+TGG 0.606885 5_2:+74379072 None:intergenic
CATCTCTTGCTAGATGGTGG+TGG 0.607034 5_2:-74382515 Msa0788070:intron
GATTGAGCAGCCAAAGCAGG+AGG 0.610604 5_2:-74379114 Msa0788070:CDS
ACCGTGACCAGACTTCCCAT+TGG 0.611137 5_2:+74381862 None:intergenic
CTGTGCAGTCAACTGAGTTG+AGG 0.612178 5_2:-74380789 Msa0788070:CDS
GAAGACGATGAGAGTTGCAA+GGG 0.616553 5_2:+74381380 None:intergenic
AATCCATGAAGAATGAACAC+TGG 0.617265 5_2:-74376876 Msa0788070:three_prime_UTR
TGAAGACGATGAGAGTTGCA+AGG 0.618276 5_2:+74381379 None:intergenic
GGTGAGATGTTGCCCTTGAG+GGG 0.619566 5_2:+74377143 None:intergenic
CATTGGAGACAGGTAAATTG+GGG 0.621229 5_2:+74377746 None:intergenic
GTGCCTGAGGCTTTAAAAGG+TGG 0.624955 5_2:-74380736 Msa0788070:CDS
GATGGAGGAACTTACAACAA+AGG 0.635043 5_2:+74378944 None:intergenic
CAACTACATGTTTCTAAGGG+GGG 0.639254 5_2:+74376695 None:intergenic
TGTTGGCGGTGCTGTCAGTA+GGG 0.639667 5_2:-74381576 Msa0788070:CDS
GGAGTGACCGGATATCTGCT+GGG 0.642640 5_2:-74381547 Msa0788070:CDS
CACTGAAGAAGATTCAGGAG+TGG 0.642648 5_2:+74380633 None:intergenic
ACAGGTATAGAGCTCTGTAG+AGG 0.643476 5_2:+74377840 None:intergenic
GAGCTTCCAGTATTCACAGT+CGG 0.644739 5_2:+74377528 None:intergenic
ACAACTACATGTTTCTAAGG+GGG 0.647835 5_2:+74376694 None:intergenic
GCTGCAAGAACAACAGCTTG+AGG 0.648149 5_2:+74381749 None:intergenic
CACGACATCAGAGAGATCAC+CGG 0.648780 5_2:-74384817 Msa0788070:CDS
ACAACAAAGGAAGGGAAGTG+TGG 0.650206 5_2:+74378957 None:intergenic
TGAAGTGTAAATAACAAATG+CGG 0.652445 5_2:-74376846 Msa0788070:three_prime_UTR
CTAGGAGCATATCCAACAGG+TGG 0.652618 5_2:+74377552 None:intergenic
GAGGAACCTTCCTATTCGAA+GGG 0.652976 5_2:-74382486 Msa0788070:CDS
AACTTGCTGAGTCCCTAACA+TGG 0.655137 5_2:+74379016 None:intergenic
TGCCAGCACAGGATCTGAAG+AGG 0.656250 5_2:+74381622 None:intergenic
GCTGTGTGGATACATGCACC+AGG 0.661823 5_2:-74377210 Msa0788070:CDS
TCTGAAGAGGAACAAACACC+CGG 0.663195 5_2:+74381635 None:intergenic
ATTGTAGGGATTGAGCAGCA+GGG 0.668215 5_2:-74383061 Msa0788070:intron
TTCCAATTGATCTGAGAAGG+CGG 0.672381 5_2:+74376967 None:intergenic
ACCCGCCACCACCACCACCG+CGG 0.677659 5_2:+74384878 None:intergenic
TTGGAGACAGGTAAATTGGG+GGG 0.679905 5_2:+74377748 None:intergenic
TCTCTCTCTGAAAGAATGAG+CGG 0.679913 5_2:-74384904 Msa0788070:exon
GAGGTATTGTTAACTCCCGA+GGG 0.680947 5_2:-74379095 Msa0788070:CDS
GATTGATTTGCAGCACTACG+GGG 0.681379 5_2:+74381884 None:intergenic
TCAATTACAAGAACTGACCA+AGG 0.681707 5_2:-74381698 Msa0788070:CDS
GATCAAAACAACGTGGACAG+GGG 0.696924 5_2:-74383023 Msa0788070:CDS
ATACAGGTGAGAATTGAGAA+CGG 0.696993 5_2:+74376590 None:intergenic
AGGAACTTACAACAAAGGAA+GGG 0.699468 5_2:+74378949 None:intergenic
CTCTCTGAAAGAATGAGCGG+CGG 0.701991 5_2:-74384901 Msa0788070:exon
CAACATGTATCTACCAGCCG+CGG 0.706772 5_2:-74377676 Msa0788070:CDS
TTCCCGGTATCTATCAACCA+GGG 0.707077 5_2:-74377089 Msa0788070:CDS
AGAGTGAAGGCTCTGCTGTG+TGG 0.711840 5_2:-74377224 Msa0788070:CDS
AGCTGCTGATAAGATCCTGG+AGG 0.720533 5_2:+74376991 None:intergenic
ATTGGAGACAGGTAAATTGG+GGG 0.735261 5_2:+74377747 None:intergenic
TAAAACAGCCAATGTCACAG+AGG 0.735538 5_2:-74380830 Msa0788070:CDS
GCTGTTGAGGGAAACCATTG+TGG 0.747524 5_2:+74377709 None:intergenic
GGAGTGATATATGATCCCGA+AGG 0.756582 5_2:+74377573 None:intergenic
GAGTCTAGATCAAAACAACG+TGG 0.798909 5_2:-74383030 Msa0788070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTCATAAATTATTTT+AGG + chr5_2:74378715-74378734 None:intergenic 10.0%
!! ATTATAAGAAAATATAATAG+CGG - chr5_2:74379166-74379185 Msa0788070:CDS 10.0%
!!! AAAATTAATAACAGAATTTT+AGG + chr5_2:74380548-74380567 None:intergenic 10.0%
!! TAAAAAAAACAAGATTAAAT+AGG - chr5_2:74381545-74381564 Msa0788070:CDS 10.0%
!! TGGATTAATAATTAAATATA+AGG + chr5_2:74383503-74383522 None:intergenic 10.0%
!!! TATTTATTTTTTGAAGAAAT+AGG + chr5_2:74384091-74384110 None:intergenic 10.0%
!!! TATATTTATTTTTATTTTCG+AGG - chr5_2:74384733-74384752 Msa0788070:CDS 10.0%
!!! AGCAAAATATAAATTGTTTT+TGG - chr5_2:74377398-74377417 Msa0788070:intron 15.0%
!! TTTAATTGTATTTGAAAGTT+AGG - chr5_2:74378056-74378075 Msa0788070:intron 15.0%
!! ATAAACATCAGAAAAAATTA+TGG + chr5_2:74378369-74378388 None:intergenic 15.0%
!! ATTTCTTTATAAGATTTAAC+AGG + chr5_2:74380184-74380203 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr5_2:74381232-74381251 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr5_2:74381256-74381275 None:intergenic 15.0%
!!! TTTTTTTTTTCCTTACATTT+TGG - chr5_2:74381615-74381634 Msa0788070:CDS 15.0%
!!! TTTTTTTTTCCTTACATTTT+GGG - chr5_2:74381616-74381635 Msa0788070:CDS 15.0%
!! TTAATTATTAATCCATTTGT+TGG - chr5_2:74383508-74383527 Msa0788070:intron 15.0%
!!! CAATTTTTTATTGAAATACT+TGG - chr5_2:74384181-74384200 Msa0788070:intron 15.0%
!!! TAATTTCTTTTCTCATTTTT+TGG + chr5_2:74384661-74384680 None:intergenic 15.0%
!!! TTTACTGTTTTCTTGATTTA+AGG - chr5_2:74376940-74376959 Msa0788070:exon 20.0%
!!! TTACTGTTTTCTTGATTTAA+GGG - chr5_2:74376941-74376960 Msa0788070:exon 20.0%
!!! TTTTTTTATTGTGTAATGCT+TGG - chr5_2:74377290-74377309 Msa0788070:intron 20.0%
!! ATGTTAAAAGCTTACAAAAT+GGG - chr5_2:74377343-74377362 Msa0788070:intron 20.0%
!! AATACTAAGAACTAACATTA+GGG + chr5_2:74377861-74377880 None:intergenic 20.0%
!! AAATACTAAGAACTAACATT+AGG + chr5_2:74377862-74377881 None:intergenic 20.0%
!!! CATATCGAGTTTTTTAAAAA+TGG + chr5_2:74378007-74378026 None:intergenic 20.0%
!! ATATGCAATACAATTTAAGT+TGG - chr5_2:74378022-74378041 Msa0788070:intron 20.0%
!! AGTTAAAAACAAATCAGTTA+CGG + chr5_2:74378395-74378414 None:intergenic 20.0%
!!! TAACTGATTTGTTTTTAACT+TGG - chr5_2:74378395-74378414 Msa0788070:intron 20.0%
!!! ACATTTTTCATACTTTTTAG+AGG - chr5_2:74378529-74378548 Msa0788070:intron 20.0%
!!! ATCTCATAAATTATTTTAGG+AGG + chr5_2:74378712-74378731 None:intergenic 20.0%
!! GAAATTAAAGTATAATTCTC+AGG + chr5_2:74378748-74378767 None:intergenic 20.0%
!! TCATCTTGATTGATTAAAAA+GGG + chr5_2:74378795-74378814 None:intergenic 20.0%
!! TTCATCTTGATTGATTAAAA+AGG + chr5_2:74378796-74378815 None:intergenic 20.0%
!! TTGAACGTTATATTTGTAAA+AGG + chr5_2:74379375-74379394 None:intergenic 20.0%
!! TTTATAAGATTTAACAGGTA+TGG + chr5_2:74380179-74380198 None:intergenic 20.0%
!! TAGAGAAAAATCAAAAAGAA+TGG + chr5_2:74380582-74380601 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr5_2:74381170-74381189 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr5_2:74381246-74381265 Msa0788070:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr5_2:74381289-74381308 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG - chr5_2:74381379-74381398 Msa0788070:CDS 20.0%
!! TATATTAAACCTCTTCATTA+AGG - chr5_2:74381649-74381668 Msa0788070:CDS 20.0%
!! ATATTAAACCTCTTCATTAA+GGG - chr5_2:74381650-74381669 Msa0788070:CDS 20.0%
!! GTTCATTATAGTTATTCTTT+GGG + chr5_2:74382078-74382097 None:intergenic 20.0%
!! AAATCTTAAGAAATACATGA+TGG + chr5_2:74382558-74382577 None:intergenic 20.0%
!! AAAGATAGTATTAAGACATA+GGG + chr5_2:74382613-74382632 None:intergenic 20.0%
!! AAAAGATAGTATTAAGACAT+AGG + chr5_2:74382614-74382633 None:intergenic 20.0%
!!! ATGTCTTAATACTATCTTTT+TGG - chr5_2:74382614-74382633 Msa0788070:intron 20.0%
!!! TAATACTATCTTTTTGGTTT+CGG - chr5_2:74382620-74382639 Msa0788070:intron 20.0%
!!! CTTTAAGTTTATTCTTTGTA+AGG + chr5_2:74383170-74383189 None:intergenic 20.0%
!! CTTACAAAGAATAAACTTAA+AGG - chr5_2:74383168-74383187 Msa0788070:intron 20.0%
!! ACTTAAGTTTATTCTTTGTA+AGG + chr5_2:74383346-74383365 None:intergenic 20.0%
!!! CAATTGGAATTCTAATTTTT+AGG - chr5_2:74384528-74384547 Msa0788070:intron 20.0%
!!! ATATGTGCATTTTAACAATA+TGG + chr5_2:74384575-74384594 None:intergenic 20.0%
!!! AAGAAATTAGTAACTGTTTT+TGG - chr5_2:74384672-74384691 Msa0788070:intron 20.0%
!! TTGAATTATACTGTTCTATA+TGG - chr5_2:74384938-74384957 Msa0788070:five_prime_UTR 20.0%
!! CATGTTTGATTCTTTAAGAA+CGG + chr5_2:74376719-74376738 None:intergenic 25.0%
!!! TCACAGTTACTGATTTTTTT+TGG - chr5_2:74376866-74376885 Msa0788070:three_prime_UTR 25.0%
!! TACTGTTTTCTTGATTTAAG+GGG - chr5_2:74376942-74376961 Msa0788070:exon 25.0%
! TGGAAACATGATTGAAAATA+AGG - chr5_2:74377310-74377329 Msa0788070:intron 25.0%
! GATGTTAAAAGCTTACAAAA+TGG - chr5_2:74377342-74377361 Msa0788070:intron 25.0%
!!! GAGTTTTTCGTTTTTATGTT+CGG - chr5_2:74377728-74377747 Msa0788070:CDS 25.0%
!! ATACTTTTCATGAAGTAAGA+AGG - chr5_2:74377793-74377812 Msa0788070:CDS 25.0%
!! AAAATCTTACTTCTTTTCTG+CGG + chr5_2:74377827-74377846 None:intergenic 25.0%
! GTAATTGTTAGTATTATGCT+GGG + chr5_2:74377966-74377985 None:intergenic 25.0%
! AGTAATTGTTAGTATTATGC+TGG + chr5_2:74377967-74377986 None:intergenic 25.0%
! ATTGTATTTGAAAGTTAGGT+TGG - chr5_2:74378060-74378079 Msa0788070:intron 25.0%
! TATTTAGATGAGAAATCAAC+TGG + chr5_2:74378091-74378110 None:intergenic 25.0%
!! AACATAAAACAGGTCTTTTA+CGG + chr5_2:74378276-74378295 None:intergenic 25.0%
!! AAAAGTATGAAAAATGTACC+AGG + chr5_2:74378526-74378545 None:intergenic 25.0%
! TTCGTTTATGAAGATTCTTA+AGG - chr5_2:74378586-74378605 Msa0788070:intron 25.0%
!!! ATTTTACAGACTGATTTTCT+TGG + chr5_2:74378615-74378634 None:intergenic 25.0%
!! ATCAGTCTGTAAAATACTTT+TGG - chr5_2:74378620-74378639 Msa0788070:intron 25.0%
! TAGCATCAAAAGATAAAAGT+GGG + chr5_2:74378837-74378856 None:intergenic 25.0%
! ATAGCATCAAAAGATAAAAG+TGG + chr5_2:74378838-74378857 None:intergenic 25.0%
! AATGAGCTAATAAAATAAGC+AGG + chr5_2:74378925-74378944 None:intergenic 25.0%
!! TTAGTGTTTTTCTGTAAATC+TGG + chr5_2:74379071-74379090 None:intergenic 25.0%
! TAATAGAAATTACAACCTTG+AGG + chr5_2:74379108-74379127 None:intergenic 25.0%
! TCTTATAATCAGAGATAGTA+TGG + chr5_2:74379155-74379174 None:intergenic 25.0%
! AACGAAAGAAAAACAAAGTA+AGG - chr5_2:74379256-74379275 Msa0788070:intron 25.0%
! GCAAACAAACAAATACAAAA+GGG + chr5_2:74379295-74379314 None:intergenic 25.0%
! TGCAAACAAACAAATACAAA+AGG + chr5_2:74379296-74379315 None:intergenic 25.0%
!! AGTAATTTCCTACTTGATTT+TGG - chr5_2:74379483-74379502 Msa0788070:intron 25.0%
! TTGTTTCCTTTAACATGATT+TGG + chr5_2:74379960-74379979 None:intergenic 25.0%
!! ACAATTTTACCAGATGTATA+TGG - chr5_2:74380276-74380295 Msa0788070:intron 25.0%
!!! AAGATTTTTTTCCCATACTT+TGG + chr5_2:74380380-74380399 None:intergenic 25.0%
!!! CTTTTCTGAAGATATTTCAA+GGG - chr5_2:74380406-74380425 Msa0788070:intron 25.0%
! TTTCAGCACAAAAAAAATCT+GGG + chr5_2:74380481-74380500 None:intergenic 25.0%
! ATTTCAGCACAAAAAAAATC+TGG + chr5_2:74380482-74380501 None:intergenic 25.0%
! AAAAATCAAAAAGAATGGAG+CGG + chr5_2:74380577-74380596 None:intergenic 25.0%
!! TTTTTGCTTACAATTTGAGA+CGG + chr5_2:74381037-74381056 None:intergenic 25.0%
!!! ACAAATTGTTTTTGCTAAAG+CGG + chr5_2:74381121-74381140 None:intergenic 25.0%
!!! TTTCTTTGGAATAAGTTTCA+TGG - chr5_2:74381393-74381412 Msa0788070:CDS 25.0%
!!! TTCTTTGGAATAAGTTTCAT+GGG - chr5_2:74381394-74381413 Msa0788070:CDS 25.0%
!! GATGTAAGAACAATTTTCAT+TGG - chr5_2:74381419-74381438 Msa0788070:CDS 25.0%
!!! TTTTCATTGGCTATTGATTA+TGG - chr5_2:74381432-74381451 Msa0788070:CDS 25.0%
! TCATAGACAAAGAAATGATT+TGG - chr5_2:74381863-74381882 Msa0788070:CDS 25.0%
! TAACTCAAAAAGATGAATTG+GGG + chr5_2:74381922-74381941 None:intergenic 25.0%
! GTAACTCAAAAAGATGAATT+GGG + chr5_2:74381923-74381942 None:intergenic 25.0%
! GGTTCATTATAGTTATTCTT+TGG + chr5_2:74382079-74382098 None:intergenic 25.0%
! ACTATAATGAACCTAAAAGT+TGG - chr5_2:74382086-74382105 Msa0788070:intron 25.0%
! TAATCCTCCTCTTATAAAAA+AGG - chr5_2:74382163-74382182 Msa0788070:intron 25.0%
!!! TGATCTTCCTTTTTTATAAG+AGG + chr5_2:74382173-74382192 None:intergenic 25.0%
!! TCAAAACATTGATTACAACA+TGG + chr5_2:74382204-74382223 None:intergenic 25.0%
!!! TGTTGTAATCAATGTTTTGA+TGG - chr5_2:74382204-74382223 Msa0788070:intron 25.0%
! TACTTCAAACAACATAAACT+AGG - chr5_2:74383037-74383056 Msa0788070:CDS 25.0%
! ATTTAGACAAAGTTAGTTAC+TGG - chr5_2:74383092-74383111 Msa0788070:intron 25.0%
! GGTCAATGAAAAAGAATTTA+AGG - chr5_2:74383310-74383329 Msa0788070:intron 25.0%
! TTGAAGAATAAACTTGAGAT+TGG - chr5_2:74383377-74383396 Msa0788070:intron 25.0%
!! TTATTAATCCATTTGTTGGT+TGG - chr5_2:74383512-74383531 Msa0788070:intron 25.0%
! AAAGAATGACAGAGATATTA+GGG + chr5_2:74383571-74383590 None:intergenic 25.0%
! TAAAGAATGACAGAGATATT+AGG + chr5_2:74383572-74383591 None:intergenic 25.0%
!!! TGGAATTCTAATTTTTAGGA+TGG - chr5_2:74384532-74384551 Msa0788070:intron 25.0%
!!! GGAATTCTAATTTTTAGGAT+GGG - chr5_2:74384533-74384552 Msa0788070:intron 25.0%
! TGAAGTGTAAATAACAAATG+CGG - chr5_2:74384635-74384654 Msa0788070:intron 25.0%
! AATATCATCAGGAATTACTA+AGG + chr5_2:74384824-74384843 None:intergenic 25.0%
CGTTCTTAAAGAATCAAACA+TGG - chr5_2:74376717-74376736 Msa0788070:three_prime_UTR 30.0%
!! AGCTTTTGAGTAGTTTCATT+GGG + chr5_2:74376745-74376764 None:intergenic 30.0%
!! AAGCTTTTGAGTAGTTTCAT+TGG + chr5_2:74376746-74376765 None:intergenic 30.0%
ACTCAAAAGCTTCTCTATTT+AGG - chr5_2:74376754-74376773 Msa0788070:three_prime_UTR 30.0%
! TTCTTGATTTAAGGGGTTTT+TGG - chr5_2:74376949-74376968 Msa0788070:exon 30.0%
!! ATAAGTTTTGTGAGACTGTT+CGG - chr5_2:74377000-74377019 Msa0788070:CDS 30.0%
!! CATTGTTCATAAGCTGTTTT+TGG - chr5_2:74377047-74377066 Msa0788070:CDS 30.0%
AAGCTTACAAAATGGGATTT+AGG - chr5_2:74377350-74377369 Msa0788070:intron 30.0%
CGAAATAGCTAATACAAACA+GGG + chr5_2:74377376-74377395 None:intergenic 30.0%
TCGAAATAGCTAATACAAAC+AGG + chr5_2:74377377-74377396 None:intergenic 30.0%
!! GTTTTTGGATAAGCTATAAG+CGG - chr5_2:74377413-74377432 Msa0788070:intron 30.0%
TAGCTTATGACATTGTTCAA+AGG + chr5_2:74377486-74377505 None:intergenic 30.0%
GCTTATTTGAGCTTATCTAT+TGG + chr5_2:74377548-74377567 None:intergenic 30.0%
!! TTTATGTTCGGTGTATTAAC+TGG - chr5_2:74377740-74377759 Msa0788070:CDS 30.0%
! TATTTTCCCATTACTAGTAG+AGG - chr5_2:74377890-74377909 Msa0788070:intron 30.0%
TTAACTCCTCTACTAGTAAT+GGG + chr5_2:74377899-74377918 None:intergenic 30.0%
TGAATATACATGGTTGCAAT+AGG - chr5_2:74378194-74378213 Msa0788070:intron 30.0%
ATTACAGAGTGCATACTAAA+CGG + chr5_2:74378233-74378252 None:intergenic 30.0%
!!! TTTTTAACTTGGCCATTGTA+GGG - chr5_2:74378406-74378425 Msa0788070:intron 30.0%
AGCATCAAAAGATAAAAGTG+GGG + chr5_2:74378836-74378855 None:intergenic 30.0%
TAGGACAGATCTCTATAATA+TGG + chr5_2:74378875-74378894 None:intergenic 30.0%
! TGATGATGATGATGATGAAT+AGG + chr5_2:74378894-74378913 None:intergenic 30.0%
CAAGAGATGTTTGAAAGAAA+AGG + chr5_2:74378955-74378974 None:intergenic 30.0%
TAACCAAATCTCATTCATTC+TGG - chr5_2:74379326-74379345 Msa0788070:intron 30.0%
TTACCAGAATGAATGAGATT+TGG + chr5_2:74379332-74379351 None:intergenic 30.0%
CAGTAAATCCAAAATCAAGT+AGG + chr5_2:74379494-74379513 None:intergenic 30.0%
TCAACATCAAATTTCTGTAC+CGG - chr5_2:74379827-74379846 Msa0788070:intron 30.0%
! TTTGACTTTGGTATTGCATT+CGG + chr5_2:74380053-74380072 None:intergenic 30.0%
! CTTTCAACTTCATTTGACTT+TGG + chr5_2:74380065-74380084 None:intergenic 30.0%
CAAATGAAGTTGAAAGTAAC+CGG - chr5_2:74380069-74380088 Msa0788070:intron 30.0%
ATAAAAACTTTACCTTGAGG+TGG + chr5_2:74380155-74380174 None:intergenic 30.0%
GGAATAAAAACTTTACCTTG+AGG + chr5_2:74380158-74380177 None:intergenic 30.0%
AAACAATGACCATATACATC+TGG + chr5_2:74380288-74380307 None:intergenic 30.0%
CCTTGAAATATCTTCAGAAA+AGG + chr5_2:74380408-74380427 None:intergenic 30.0%
!! CCTTTTCTGAAGATATTTCA+AGG - chr5_2:74380405-74380424 Msa0788070:intron 30.0%
TGAAATAATCCCACATTTGA+TGG - chr5_2:74380496-74380515 Msa0788070:intron 30.0%
AGTATGATTCCATCAAATGT+GGG + chr5_2:74380508-74380527 None:intergenic 30.0%
ATGCTGAAACTGTTAATTCA+AGG - chr5_2:74380872-74380891 Msa0788070:intron 30.0%
! CAAAGAAAAGCACATACATT+AGG + chr5_2:74380915-74380934 None:intergenic 30.0%
TCACTCATACACCATTTAAA+AGG + chr5_2:74380974-74380993 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr5_2:74381141-74381160 None:intergenic 30.0%
! GCTATTGATTATGGAGAAAA+TGG - chr5_2:74381441-74381460 Msa0788070:CDS 30.0%
! GTCTGTTTTGCTTACATTTT+TGG - chr5_2:74381578-74381597 Msa0788070:CDS 30.0%
!! TTTTTCCTTACATTTTGGGA+CGG - chr5_2:74381620-74381639 Msa0788070:CDS 30.0%
!!! GTTTATGGCGAATGTTTTTT+TGG - chr5_2:74381826-74381845 Msa0788070:CDS 30.0%
AACTCAAAAAGATGAATTGG+GGG + chr5_2:74381921-74381940 None:intergenic 30.0%
GGTAACTCAAAAAGATGAAT+TGG + chr5_2:74381924-74381943 None:intergenic 30.0%
!!! TTTTTGAGTTACCCCAAATT+AGG - chr5_2:74381931-74381950 Msa0788070:intron 30.0%
!!! TTTTGAGTTACCCCAAATTA+GGG - chr5_2:74381932-74381951 Msa0788070:intron 30.0%
GAATTAAAACCCCTAATTTG+GGG + chr5_2:74381945-74381964 None:intergenic 30.0%
GGAATTAAAACCCCTAATTT+GGG + chr5_2:74381946-74381965 None:intergenic 30.0%
TGGAATTAAAACCCCTAATT+TGG + chr5_2:74381947-74381966 None:intergenic 30.0%
!!! AATTAGGGGTTTTAATTCCA+TGG - chr5_2:74381947-74381966 Msa0788070:intron 30.0%
!!! TCTTCCTTTTTTATAAGAGG+AGG + chr5_2:74382170-74382189 None:intergenic 30.0%
AATTTCATGTCTACCATGTT+AGG - chr5_2:74382452-74382471 Msa0788070:CDS 30.0%
ATTTCATGTCTACCATGTTA+GGG - chr5_2:74382453-74382472 Msa0788070:CDS 30.0%
TCTTAAGAAATACATGATGG+AGG + chr5_2:74382555-74382574 None:intergenic 30.0%
!! GATACTGACTTGTATTCATA+TGG - chr5_2:74382649-74382668 Msa0788070:intron 30.0%
TTGTATTCATATGGTTGGAA+AGG - chr5_2:74382658-74382677 Msa0788070:intron 30.0%
TTAGTGCAAATTAATGTGAG+AGG + chr5_2:74382695-74382714 None:intergenic 30.0%
! AGTTTTCAATCATAAAGTCC+GGG + chr5_2:74382803-74382822 None:intergenic 30.0%
! GAGTTTTCAATCATAAAGTC+CGG + chr5_2:74382804-74382823 None:intergenic 30.0%
TTAAGCATATATTAAGCCCT+TGG - chr5_2:74382900-74382919 Msa0788070:intron 30.0%
! TCAGTAGTTTATTTGTTGAC+AGG - chr5_2:74382950-74382969 Msa0788070:intron 30.0%
AATGTCTAAACTACACATCT+TGG - chr5_2:74382990-74383009 Msa0788070:CDS 30.0%
! TATGTTGTTTGAAGTAAGCA+TGG + chr5_2:74383033-74383052 None:intergenic 30.0%
TTAGTTACTGGTCAATGAAA+AGG - chr5_2:74383104-74383123 Msa0788070:intron 30.0%
GGTCAATGAAAAAGAATGTA+AGG - chr5_2:74383134-74383153 Msa0788070:intron 30.0%
! TATGTTGTTTGAAGTAAGCA+TGG + chr5_2:74383033-74383052 None:intergenic 30.0%
ATTTAGACAAAGTTAGCTAC+TGG - chr5_2:74383268-74383287 Msa0788070:intron 30.0%
ACTTGAGATTGGAAATCAAT+TGG - chr5_2:74383388-74383407 Msa0788070:intron 30.0%
TGGCTTAAAAATTGATGCAT+TGG + chr5_2:74383755-74383774 None:intergenic 30.0%
!! CATCAATTTTTAAGCCACAA+TGG - chr5_2:74383758-74383777 Msa0788070:intron 30.0%
! TAGAAGAATTTTACAGACTC+TGG - chr5_2:74384109-74384128 Msa0788070:intron 30.0%
!!! TTTTTTTTTCTGCAGAGTGA+AGG - chr5_2:74384244-74384263 Msa0788070:intron 30.0%
! TAGAGAATTAAGTTGCAAAC+CGG + chr5_2:74384308-74384327 None:intergenic 30.0%
! TGTTATTTACACTTCAGATC+AGG + chr5_2:74384631-74384650 None:intergenic 30.0%
! AACAACTACATGTTTCTAAG+GGG + chr5_2:74384791-74384810 None:intergenic 30.0%
! CAACAACTACATGTTTCTAA+GGG + chr5_2:74384792-74384811 None:intergenic 30.0%
AACATGTAGTTGTTGCTATA+AGG - chr5_2:74384797-74384816 Msa0788070:CDS 30.0%
TGGCTTAGTATAATATCATC+AGG + chr5_2:74384835-74384854 None:intergenic 30.0%
GCTATCAAAATGTAGTATAC+AGG + chr5_2:74384910-74384929 None:intergenic 30.0%
! ATGGTTTTCCGTACATTGTT+GGG + chr5_2:74376643-74376662 None:intergenic 35.0%
!! AATAAGCTGTTTCTCCAAAC+AGG - chr5_2:74377210-74377229 Msa0788070:CDS 35.0%
!! ATAAGCTGTTTCTCCAAACA+GGG - chr5_2:74377211-74377230 Msa0788070:CDS 35.0%
CTTAACTCCTCTACTAGTAA+TGG + chr5_2:74377900-74377919 None:intergenic 35.0%
CATTACTAGTAGAGGAGTTA+AGG - chr5_2:74377898-74377917 Msa0788070:intron 35.0%
GTTAAGGAGCAGAGTAATAT+TGG - chr5_2:74377914-74377933 Msa0788070:intron 35.0%
! AAATCCTCATTTTCCCTAAC+TGG - chr5_2:74378170-74378189 Msa0788070:intron 35.0%
CATGTATATTCAGCCAGTTA+GGG + chr5_2:74378186-74378205 None:intergenic 35.0%
! ACCTGTTTTATGTTTTGCAG+TGG - chr5_2:74378282-74378301 Msa0788070:intron 35.0%
! CCTGTTTTATGTTTTGCAGT+GGG - chr5_2:74378283-74378302 Msa0788070:intron 35.0%
!!! GTTTTTAACTTGGCCATTGT+AGG - chr5_2:74378405-74378424 Msa0788070:intron 35.0%
AAATGTACCAGGAAAGTTTG+AGG + chr5_2:74378515-74378534 None:intergenic 35.0%
!! CTTTTTAGAGGCTAGATAGT+AGG - chr5_2:74378541-74378560 Msa0788070:intron 35.0%
AATCTTCATAAACGAAGCAG+AGG + chr5_2:74378582-74378601 None:intergenic 35.0%
TTCAAACATCTCTTGCTAGA+TGG - chr5_2:74378960-74378979 Msa0788070:CDS 35.0%
AAATTACAACCTTGAGGCTT+GGG + chr5_2:74379102-74379121 None:intergenic 35.0%
CTTGCTTCTTATCGTTAAAC+AGG + chr5_2:74379213-74379232 None:intergenic 35.0%
CTGTTTAACGATAAGAAGCA+AGG - chr5_2:74379211-74379230 Msa0788070:CDS 35.0%
TTGTAAAAGGTTCACTCAGA+AGG + chr5_2:74379362-74379381 None:intergenic 35.0%
GATGCAGTTTATTTGACAAG+TGG - chr5_2:74379513-74379532 Msa0788070:intron 35.0%
AGTTCTTGTAATTGAGGCAA+AGG + chr5_2:74379778-74379797 None:intergenic 35.0%
TTGGTCAGTTCTTGTAATTG+AGG + chr5_2:74379784-74379803 None:intergenic 35.0%
TCAATTACAAGAACTGACCA+AGG - chr5_2:74379783-74379802 Msa0788070:intron 35.0%
! AACTTGAGAGAGATTTTCCT+TGG + chr5_2:74379803-74379822 None:intergenic 35.0%
CAACATCAAATTTCTGTACC+GGG - chr5_2:74379828-74379847 Msa0788070:intron 35.0%
TTGACTTTGGTATTGCATTC+GGG + chr5_2:74380052-74380071 None:intergenic 35.0%
TAAACCAGAAATTGAGGAGA+TGG + chr5_2:74380225-74380244 None:intergenic 35.0%
!! ATCTCCTCAATTTCTGGTTT+AGG - chr5_2:74380224-74380243 Msa0788070:intron 35.0%
! TATATGGTCATTGTTTTCCC+TGG - chr5_2:74380292-74380311 Msa0788070:intron 35.0%
AATATTGTCCTCCAATACCA+GGG + chr5_2:74380312-74380331 None:intergenic 35.0%
TAATATTGTCCTCCAATACC+AGG + chr5_2:74380313-74380332 None:intergenic 35.0%
TTCAGTTCAATTACTCTCGA+GGG + chr5_2:74380337-74380356 None:intergenic 35.0%
AAATCCAAACACGAACAATC+AGG + chr5_2:74380440-74380459 None:intergenic 35.0%
AAATCTGGGAGTTAACTGAT+AGG + chr5_2:74380467-74380486 None:intergenic 35.0%
CAGTATGATTCCATCAAATG+TGG + chr5_2:74380509-74380528 None:intergenic 35.0%
!! AACAGAATTTTAGGTGACTC+AGG + chr5_2:74380539-74380558 None:intergenic 35.0%
TTAAAAGGTGGTCTGACATT+TGG - chr5_2:74380757-74380776 Msa0788070:CDS 35.0%
! ACACTGCTAGATTTTTCACT+TGG + chr5_2:74380802-74380821 None:intergenic 35.0%
GAAAAATCTAGCAGTGTAAC+TGG - chr5_2:74380805-74380824 Msa0788070:CDS 35.0%
! TGTATGTGCTTTTCTTTGCA+TGG - chr5_2:74380917-74380936 Msa0788070:intron 35.0%
! ACCATTTAAAAGGTGTGAGA+GGG + chr5_2:74380964-74380983 None:intergenic 35.0%
AATGGTGTATGAGTGATGTA+TGG - chr5_2:74380978-74380997 Msa0788070:intron 35.0%
TGTATGAGTGATGTATGGTT+GGG - chr5_2:74380983-74381002 Msa0788070:intron 35.0%
AGTAGTGTGCAGAGTATAAT+TGG + chr5_2:74381208-74381227 None:intergenic 35.0%
!!! GACACTCATTTTGAAACGAA+GGG - chr5_2:74381340-74381359 Msa0788070:CDS 35.0%
AAACGAAGGGAGTAAGAATT+TGG - chr5_2:74381353-74381372 Msa0788070:CDS 35.0%
TCAAACATCCCTTAATGAAG+AGG + chr5_2:74381661-74381680 None:intergenic 35.0%
ATTAAGGGATGTTTGAGAGT+AGG - chr5_2:74381665-74381684 Msa0788070:CDS 35.0%
TTAAGGGATGTTTGAGAGTA+GGG - chr5_2:74381666-74381685 Msa0788070:CDS 35.0%
AATGAAAGCCAGTGTTTGTT+TGG - chr5_2:74381774-74381793 Msa0788070:CDS 35.0%
ATGAAAGCCAGTGTTTGTTT+GGG - chr5_2:74381775-74381794 Msa0788070:CDS 35.0%
! TTTGAGTTACCCCAAATTAG+GGG - chr5_2:74381933-74381952 Msa0788070:intron 35.0%
!! GCATGAGTTTATTTTCTCCA+TGG + chr5_2:74381967-74381986 None:intergenic 35.0%
!! TTGGGCTTTGTTTGGAAATT+GGG + chr5_2:74382060-74382079 None:intergenic 35.0%
!! TTTGGGCTTTGTTTGGAAAT+TGG + chr5_2:74382061-74382080 None:intergenic 35.0%
!! GTTATTCTTTGGGCTTTGTT+TGG + chr5_2:74382068-74382087 None:intergenic 35.0%
! TCTGAAGGCATATCTATAAC+TGG - chr5_2:74382332-74382351 Msa0788070:intron 35.0%
TTTGAACAGTCAGAATTGGA+TGG + chr5_2:74382412-74382431 None:intergenic 35.0%
! GTTCAAAGTGCTCAAAACTA+TGG - chr5_2:74382425-74382444 Msa0788070:CDS 35.0%
ACTCAGCAAGTTCAATTTGA+GGG - chr5_2:74382476-74382495 Msa0788070:CDS 35.0%
AGGAACTTACAACAAAGGAA+GGG + chr5_2:74382535-74382554 None:intergenic 35.0%
! CTGACTTGTATTCATATGGT+TGG - chr5_2:74382653-74382672 Msa0788070:intron 35.0%
ACTAAAAGCTATTTGCTCTG+AGG - chr5_2:74382771-74382790 Msa0788070:intron 35.0%
GAACCTTCAAACAATACCAA+GGG + chr5_2:74382919-74382938 None:intergenic 35.0%
TGAACCTTCAAACAATACCA+AGG + chr5_2:74382920-74382939 None:intergenic 35.0%
! AGTTTATTTGTTGACAGGCT+TGG - chr5_2:74382955-74382974 Msa0788070:intron 35.0%
GGTCAATGAAAAGGAATAAC+TGG - chr5_2:74383113-74383132 Msa0788070:intron 35.0%
TTAGCTACTGGTCAATGAAA+AGG - chr5_2:74383280-74383299 Msa0788070:intron 35.0%
TAGCTACTGGTCAATGAAAA+GGG - chr5_2:74383281-74383300 Msa0788070:intron 35.0%
GTGTATAACCAACCAACAAA+TGG + chr5_2:74383523-74383542 None:intergenic 35.0%
TGGTGGCCTAAAATAAGAAA+CGG + chr5_2:74383678-74383697 None:intergenic 35.0%
AAAATTGATGCATTGGAGAC+AGG + chr5_2:74383748-74383767 None:intergenic 35.0%
ACAGGAAATATGGCTCATAT+TGG - chr5_2:74383881-74383900 Msa0788070:intron 35.0%
TTTGAAGAAATAGGCACAGA+TGG + chr5_2:74384082-74384101 None:intergenic 35.0%
GAATTCCAATTGATCTGAGA+AGG + chr5_2:74384520-74384539 None:intergenic 35.0%
! TAGGATGGGAAACATTTTCT+TGG - chr5_2:74384547-74384566 Msa0788070:intron 35.0%
AATCCATGAAGAATGAACAC+TGG - chr5_2:74384605-74384624 Msa0788070:intron 35.0%
! ACAACTACATGTTTCTAAGG+GGG + chr5_2:74384790-74384809 None:intergenic 35.0%
! GCAACAACTACATGTTTCTA+AGG + chr5_2:74384793-74384812 None:intergenic 35.0%
ATACAGGTGAGAATTGAGAA+CGG + chr5_2:74384894-74384913 None:intergenic 35.0%
! CTCTCTCTCTAAAAACACAG+AGG - chr5_2:74376538-74376557 Msa0788070:three_prime_UTR 40.0%
! TCTCTCTCTGAAAGAATGAG+CGG - chr5_2:74376577-74376596 Msa0788070:three_prime_UTR 40.0%
! TGGTTTTCCGTACATTGTTG+GGG + chr5_2:74376642-74376661 None:intergenic 40.0%
! GATGGTTTTCCGTACATTGT+TGG + chr5_2:74376644-74376663 None:intergenic 40.0%
TCAAATAAGCCCATCCAAAC+AGG - chr5_2:74377558-74377577 Msa0788070:CDS 40.0%
GAACAACTAAACCCTTCGAA+GGG + chr5_2:74377593-74377612 None:intergenic 40.0%
AGAACAACTAAACCCTTCGA+AGG + chr5_2:74377594-74377613 None:intergenic 40.0%
AAGGAGCAGAGTAATATTGG+AGG - chr5_2:74377917-74377936 Msa0788070:intron 40.0%
AGAGTAATATTGGAGGTCGA+GGG - chr5_2:74377924-74377943 Msa0788070:intron 40.0%
TTAGTATTATGCTGGGAGTG+GGG + chr5_2:74377959-74377978 None:intergenic 40.0%
GTTAGTATTATGCTGGGAGT+GGG + chr5_2:74377960-74377979 None:intergenic 40.0%
TGTTAGTATTATGCTGGGAG+TGG + chr5_2:74377961-74377980 None:intergenic 40.0%
AGCTCATAACACAACAAGAG+TGG + chr5_2:74378126-74378145 None:intergenic 40.0%
CCATGTATATTCAGCCAGTT+AGG + chr5_2:74378187-74378206 None:intergenic 40.0%
CCTAACTGGCTGAATATACA+TGG - chr5_2:74378184-74378203 Msa0788070:intron 40.0%
CCCACTGCAAAACATAAAAC+AGG + chr5_2:74378286-74378305 None:intergenic 40.0%
GAGTCTAGATCAAAACAACG+TGG - chr5_2:74378451-74378470 Msa0788070:intron 40.0%
TAGATCAAAACAACGTGGAC+AGG - chr5_2:74378456-74378475 Msa0788070:intron 40.0%
AGATCAAAACAACGTGGACA+GGG - chr5_2:74378457-74378476 Msa0788070:intron 40.0%
GTTTGTATGACGTCTACACT+AGG - chr5_2:74378677-74378696 Msa0788070:intron 40.0%
AAACATCTCTTGCTAGATGG+TGG - chr5_2:74378963-74378982 Msa0788070:CDS 40.0%
! CATTTTCCCTTCGAATAGGA+AGG + chr5_2:74379004-74379023 None:intergenic 40.0%
CTTCCTATTCGAAGGGAAAA+TGG - chr5_2:74379002-74379021 Msa0788070:CDS 40.0%
! ACTCCATTTTCCCTTCGAAT+AGG + chr5_2:74379008-74379027 None:intergenic 40.0%
AATTACAACCTTGAGGCTTG+GGG + chr5_2:74379101-74379120 None:intergenic 40.0%
GAAATTACAACCTTGAGGCT+TGG + chr5_2:74379103-74379122 None:intergenic 40.0%
TCACGATTCTTCAATTGCAG+AGG - chr5_2:74379561-74379580 Msa0788070:intron 40.0%
!! TGGATTGATTTGCAGCACTA+CGG + chr5_2:74379602-74379621 None:intergenic 40.0%
AGTGCTGCAAATCAATCCAA+TGG - chr5_2:74379603-74379622 Msa0788070:intron 40.0%
GTGCTGCAAATCAATCCAAT+GGG - chr5_2:74379604-74379623 Msa0788070:intron 40.0%
AATCAATCCAATGGGAAGTC+TGG - chr5_2:74379612-74379631 Msa0788070:intron 40.0%
CAACACTACCTATGAGAGAT+TGG + chr5_2:74379653-74379672 None:intergenic 40.0%
TAGAAGCTGAACTGCTTTGT+GGG + chr5_2:74379683-74379702 None:intergenic 40.0%
TTAGAAGCTGAACTGCTTTG+TGG + chr5_2:74379684-74379703 None:intergenic 40.0%
AAAGGTTTGAGTAGGAGAAG+TGG + chr5_2:74379760-74379779 None:intergenic 40.0%
ATTGAGGCAAAGGTTTGAGT+AGG + chr5_2:74379768-74379787 None:intergenic 40.0%
GGAAACAAACTTGAAGAAGC+TGG - chr5_2:74379972-74379991 Msa0788070:intron 40.0%
AAACTTTACCTTGAGGTGGT+TGG + chr5_2:74380151-74380170 None:intergenic 40.0%
GTTTCCATCTCCTCAATTTC+TGG - chr5_2:74380218-74380237 Msa0788070:intron 40.0%
CCTACCTAAACCAGAAATTG+AGG + chr5_2:74380231-74380250 None:intergenic 40.0%
!! CCTCAATTTCTGGTTTAGGT+AGG - chr5_2:74380228-74380247 Msa0788070:intron 40.0%
! GTCATTGTTTTCCCTGGTAT+TGG - chr5_2:74380298-74380317 Msa0788070:intron 40.0%
!! ATTGTTTTCCCTGGTATTGG+AGG - chr5_2:74380301-74380320 Msa0788070:intron 40.0%
CTTCAGTTCAATTACTCTCG+AGG + chr5_2:74380338-74380357 None:intergenic 40.0%
TAAAACAGCCAATGTCACAG+AGG - chr5_2:74380651-74380670 Msa0788070:CDS 40.0%
ACTGAAGAAGATTCAGGAGT+GGG + chr5_2:74380850-74380869 None:intergenic 40.0%
GCATTCACTGAAGAAGATTC+AGG + chr5_2:74380856-74380875 None:intergenic 40.0%
! TCCCTCTCACACCTTTTAAA+TGG - chr5_2:74380960-74380979 Msa0788070:intron 40.0%
! CACCATTTAAAAGGTGTGAG+AGG + chr5_2:74380965-74380984 None:intergenic 40.0%
GTGTATGAGTGATGTATGGT+TGG - chr5_2:74380982-74381001 Msa0788070:intron 40.0%
! TGCTTACAATTTGAGACGGA+GGG + chr5_2:74381033-74381052 None:intergenic 40.0%
! TTGCTTACAATTTGAGACGG+AGG + chr5_2:74381034-74381053 None:intergenic 40.0%
!! AAGCGGCACTCATTTTGAAA+CGG + chr5_2:74381104-74381123 None:intergenic 40.0%
GTGTGCAGAGTATAATTGGA+GGG + chr5_2:74381204-74381223 None:intergenic 40.0%
AGTGTGCAGAGTATAATTGG+AGG + chr5_2:74381205-74381224 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACGA+AGG - chr5_2:74381339-74381358 Msa0788070:CDS 40.0%
ATGAGAAGGGGAATGAAAGT+AGG - chr5_2:74381714-74381733 Msa0788070:CDS 40.0%
TGAGAAGGGGAATGAAAGTA+GGG - chr5_2:74381715-74381734 Msa0788070:CDS 40.0%
AGGGTTTGATGGGAATGATA+AGG - chr5_2:74381749-74381768 Msa0788070:CDS 40.0%
GGGTTTGATGGGAATGATAA+GGG - chr5_2:74381750-74381769 Msa0788070:CDS 40.0%
GGTTTGATGGGAATGATAAG+GGG - chr5_2:74381751-74381770 Msa0788070:CDS 40.0%
AAACTCTCCCAAACAAACAC+TGG + chr5_2:74381785-74381804 None:intergenic 40.0%
!! TGTTTGGGAGAGTTTTTGAG+AGG - chr5_2:74381790-74381809 Msa0788070:CDS 40.0%
TTTGGAAATTGGGAGGGTAA+GGG + chr5_2:74382050-74382069 None:intergenic 40.0%
!! GCTTTGTTTGGAAATTGGGA+GGG + chr5_2:74382056-74382075 None:intergenic 40.0%
!! CCTTTCTAGCACCAACTTTT+AGG + chr5_2:74382100-74382119 None:intergenic 40.0%
!! CCTAAAAGTTGGTGCTAGAA+AGG - chr5_2:74382097-74382116 Msa0788070:intron 40.0%
!! TTGGTGCTAGAAAGGTGTAT+AGG - chr5_2:74382105-74382124 Msa0788070:intron 40.0%
ATCAAGATGATCTCCGTGTT+CGG + chr5_2:74382270-74382289 None:intergenic 40.0%
! AAAGAGACACTAGCTTCTGA+AGG - chr5_2:74382317-74382336 Msa0788070:intron 40.0%
GTTAACAATACCTCCTGCTT+TGG + chr5_2:74382380-74382399 None:intergenic 40.0%
GCACTTTGAACAGTCAGAAT+TGG + chr5_2:74382416-74382435 None:intergenic 40.0%
GACTCAGCAAGTTCAATTTG+AGG - chr5_2:74382475-74382494 Msa0788070:CDS 40.0%
GAGGAACTTACAACAAAGGA+AGG + chr5_2:74382536-74382555 None:intergenic 40.0%
GATGGAGGAACTTACAACAA+AGG + chr5_2:74382540-74382559 None:intergenic 40.0%
!!! AGAAAGAGCGTCATTTTAGC+TGG - chr5_2:74382849-74382868 Msa0788070:intron 40.0%
AAGCCCTTGGTATTGTTTGA+AGG - chr5_2:74382913-74382932 Msa0788070:intron 40.0%
AGCATGGAGTTGACTAAACA+TGG + chr5_2:74383017-74383036 None:intergenic 40.0%
AGCATGGAGTTGACTAAACA+TGG + chr5_2:74383017-74383036 None:intergenic 40.0%
GGTCAATGAAAAGGGATAAC+TGG - chr5_2:74383289-74383308 Msa0788070:intron 40.0%
!! CTAAAATAAGAAACGGGCTG+TGG + chr5_2:74383671-74383690 None:intergenic 40.0%
!!! CACAGCCCGTTTCTTATTTT+AGG - chr5_2:74383669-74383688 Msa0788070:CDS 40.0%
GGTGGCCTAAAATAAGAAAC+GGG + chr5_2:74383677-74383696 None:intergenic 40.0%
CATATGGGAAGAAGTTAGCT+GGG + chr5_2:74383703-74383722 None:intergenic 40.0%
AGGTAAATTGGGGGGTAATA+GGG + chr5_2:74383728-74383747 None:intergenic 40.0%
ATTGGAGACAGGTAAATTGG+GGG + chr5_2:74383737-74383756 None:intergenic 40.0%
CATTGGAGACAGGTAAATTG+GGG + chr5_2:74383738-74383757 None:intergenic 40.0%
GCATTGGAGACAGGTAAATT+GGG + chr5_2:74383739-74383758 None:intergenic 40.0%
TGCATTGGAGACAGGTAAAT+TGG + chr5_2:74383740-74383759 None:intergenic 40.0%
GGCTCATATTGGAATTCCTT+CGG - chr5_2:74383892-74383911 Msa0788070:intron 40.0%
GCTCATATTGGAATTCCTTC+GGG - chr5_2:74383893-74383912 Msa0788070:intron 40.0%
TCATATATCACTCCACCTGT+TGG - chr5_2:74383917-74383936 Msa0788070:intron 40.0%
CACTGCAGTATCTTCATTTC+CGG + chr5_2:74383981-74384000 None:intergenic 40.0%
GAAAACCAGATCTACACAAC+TGG - chr5_2:74384013-74384032 Msa0788070:intron 40.0%
AAGAAATAGGCACAGATGGA+TGG + chr5_2:74384078-74384097 None:intergenic 40.0%
TATATAACCTTGCCCCTCAA+GGG - chr5_2:74384326-74384345 Msa0788070:intron 40.0%
TTCCAATTGATCTGAGAAGG+CGG + chr5_2:74384517-74384536 None:intergenic 40.0%
!!! TTTGGTGCTGACGATTTTGA+AGG - chr5_2:74384690-74384709 Msa0788070:intron 40.0%
!!! TTGGTGCTGACGATTTTGAA+GGG - chr5_2:74384691-74384710 Msa0788070:intron 40.0%
! CAACTACATGTTTCTAAGGG+GGG + chr5_2:74384789-74384808 None:intergenic 40.0%
AGCCAAGAGTTCAATAGAGT+TGG - chr5_2:74384850-74384869 Msa0788070:CDS 40.0%
CACCAACTCTATTGAACTCT+TGG + chr5_2:74384855-74384874 None:intergenic 40.0%
TTCCGATCCCCAACAATGTA+CGG - chr5_2:74376632-74376651 Msa0788070:three_prime_UTR 45.0%
TTCCGTACATTGTTGGGGAT+CGG + chr5_2:74376637-74376656 None:intergenic 45.0%
AACGGAGAAGATTTCGTCGT+CGG + chr5_2:74376701-74376720 None:intergenic 45.0%
!! AGTTTTGTGAGACTGTTCGG+TGG - chr5_2:74377003-74377022 Msa0788070:CDS 45.0%
GCTTGAGTTAAGACCCTGTT+TGG + chr5_2:74377227-74377246 None:intergenic 45.0%
ACAGTCCAAAAAGCCACACA+CGG + chr5_2:74377249-74377268 None:intergenic 45.0%
TACTACGGACCTGTTTGGAT+GGG + chr5_2:74377570-74377589 None:intergenic 45.0%
!! AAACCCTTCGAAGGGTACTA+CGG + chr5_2:74377585-74377604 None:intergenic 45.0%
CAGAGTAATATTGGAGGTCG+AGG - chr5_2:74377923-74377942 Msa0788070:intron 45.0%
TAATATTGGAGGTCGAGGGT+TGG - chr5_2:74377928-74377947 Msa0788070:intron 45.0%
TCAGCCAGTTAGGGAAAATG+AGG + chr5_2:74378177-74378196 None:intergenic 45.0%
CAGAGTGCATACTAAACGGA+TGG + chr5_2:74378229-74378248 None:intergenic 45.0%
ATTGTAGGGATTGAGCAGCA+GGG - chr5_2:74378420-74378439 Msa0788070:intron 45.0%
GATCAAAACAACGTGGACAG+GGG - chr5_2:74378458-74378477 Msa0788070:intron 45.0%
GGCTATTCCTCAAACTTTCC+TGG - chr5_2:74378505-74378524 Msa0788070:intron 45.0%
TGTATGACGTCTACACTAGG+TGG - chr5_2:74378680-74378699 Msa0788070:intron 45.0%
GAGGAACCTTCCTATTCGAA+GGG - chr5_2:74378995-74379014 Msa0788070:CDS 45.0%
GAGTTCTCTCTGCAATGTGA+TGG + chr5_2:74379031-74379050 None:intergenic 45.0%
CTGTAAATCTGGCTGAGTAG+AGG + chr5_2:74379060-74379079 None:intergenic 45.0%
!! GATTGATTTGCAGCACTACG+GGG + chr5_2:74379600-74379619 None:intergenic 45.0%
!! GGATTGATTTGCAGCACTAC+GGG + chr5_2:74379601-74379620 None:intergenic 45.0%
TCTTCTGGCCAATCTCTCAT+AGG - chr5_2:74379642-74379661 Msa0788070:intron 45.0%
TCTGAAGAGGAACAAACACC+CGG + chr5_2:74379849-74379868 None:intergenic 45.0%
GCTGGGCCAAATCATGTTAA+AGG - chr5_2:74379951-74379970 Msa0788070:intron 45.0%
GCATCCGAGAATGATAAGTC+CGG - chr5_2:74380005-74380024 Msa0788070:intron 45.0%
CATCCGAGAATGATAAGTCC+GGG - chr5_2:74380006-74380025 Msa0788070:intron 45.0%
! GCTTGTTGAATTCATGGACC+CGG + chr5_2:74380027-74380046 None:intergenic 45.0%
! CGGGTTGCTTGTTGAATTCA+TGG + chr5_2:74380033-74380052 None:intergenic 45.0%
GAAGACGATGAGAGTTGCAA+GGG + chr5_2:74380104-74380123 None:intergenic 45.0%
TGAAGACGATGAGAGTTGCA+AGG + chr5_2:74380105-74380124 None:intergenic 45.0%
TGAACTGAAGTAAAGCCCAC+CGG - chr5_2:74380348-74380367 Msa0788070:intron 45.0%
TCAGCCTGATTGTTCGTGTT+TGG - chr5_2:74380433-74380452 Msa0788070:intron 45.0%
AGTTGAGACCTCTGTGACAT+TGG + chr5_2:74380662-74380681 None:intergenic 45.0%
TCAGGCACTTGGAAATGGTT+TGG + chr5_2:74380733-74380752 None:intergenic 45.0%
AAACCATTTCCAAGTGCCTG+AGG - chr5_2:74380732-74380751 Msa0788070:CDS 45.0%
!!! CTTTTAAAGCCTCAGGCACT+TGG + chr5_2:74380744-74380763 None:intergenic 45.0%
!! CAAGTGCCTGAGGCTTTAAA+AGG - chr5_2:74380742-74380761 Msa0788070:CDS 45.0%
!!! AGACCACCTTTTAAAGCCTC+AGG + chr5_2:74380751-74380770 None:intergenic 45.0%
CACTGAAGAAGATTCAGGAG+TGG + chr5_2:74380851-74380870 None:intergenic 45.0%
!!! GGCACTCATTTTGAAACGGA+GGG + chr5_2:74381100-74381119 None:intergenic 45.0%
!!! TTCCTTACATTTTGGGACGG+AGG - chr5_2:74381623-74381642 Msa0788070:CDS 45.0%
TTCCTCCGTCCCAAAATGTA+AGG + chr5_2:74381628-74381647 None:intergenic 45.0%
AGGGTTTGATGGGAATGAGA+AGG - chr5_2:74381700-74381719 Msa0788070:CDS 45.0%
GGGTTTGATGGGAATGAGAA+GGG - chr5_2:74381701-74381720 Msa0788070:CDS 45.0%
GGTTTGATGGGAATGAGAAG+GGG - chr5_2:74381702-74381721 Msa0788070:CDS 45.0%
!! AGAGTTTTTGAGAGGTGTGG+AGG - chr5_2:74381798-74381817 Msa0788070:CDS 45.0%
!! GAGTTTTTGAGAGGTGTGGA+GGG - chr5_2:74381799-74381818 Msa0788070:CDS 45.0%
!! AGTTTTTGAGAGGTGTGGAG+GGG - chr5_2:74381800-74381819 Msa0788070:CDS 45.0%
GAATTGGGGGAGACTTTAGA+GGG + chr5_2:74381908-74381927 None:intergenic 45.0%
TGAATTGGGGGAGACTTTAG+AGG + chr5_2:74381909-74381928 None:intergenic 45.0%
GGAAAGAGGAGAGAATGAAG+GGG + chr5_2:74382011-74382030 None:intergenic 45.0%
GGGAAAGAGGAGAGAATGAA+GGG + chr5_2:74382012-74382031 None:intergenic 45.0%
GTTTGGAAATTGGGAGGGTA+AGG + chr5_2:74382051-74382070 None:intergenic 45.0%
!! GGCTTTGTTTGGAAATTGGG+AGG + chr5_2:74382057-74382076 None:intergenic 45.0%
TCAAGATGATCTCCGTGTTC+GGG + chr5_2:74382269-74382288 None:intergenic 45.0%
AAAGATTGAGCAGCCAAAGC+AGG - chr5_2:74382364-74382383 Msa0788070:intron 45.0%
!! GAGGTATTGTTAACTCCCGA+GGG - chr5_2:74382386-74382405 Msa0788070:intron 45.0%
!! AACTTGCTGAGTCCCTAACA+TGG + chr5_2:74382468-74382487 None:intergenic 45.0%
ATTTGAGGGTAGTGAGCTTC+AGG - chr5_2:74382490-74382509 Msa0788070:CDS 45.0%
ACAACAAAGGAAGGGAAGTG+TGG + chr5_2:74382527-74382546 None:intergenic 45.0%
!! TTTGCTCTGAGGTGATTTCC+CGG - chr5_2:74382782-74382801 Msa0788070:intron 45.0%
ATTGCAGACTGCAAGTTCTC+AGG - chr5_2:74383595-74383614 Msa0788070:intron 45.0%
ACAGGTATAGAGCTCTGTAG+AGG + chr5_2:74383644-74383663 None:intergenic 45.0%
AAGAAGTTAGCTGGGTATGG+TGG + chr5_2:74383695-74383714 None:intergenic 45.0%
CCATATGGGAAGAAGTTAGC+TGG + chr5_2:74383704-74383723 None:intergenic 45.0%
CCAGCTAACTTCTTCCCATA+TGG - chr5_2:74383701-74383720 Msa0788070:intron 45.0%
GGTAAATTGGGGGGTAATAG+GGG + chr5_2:74383727-74383746 None:intergenic 45.0%
CAGGTAAATTGGGGGGTAAT+AGG + chr5_2:74383729-74383748 None:intergenic 45.0%
TTGGAGACAGGTAAATTGGG+GGG + chr5_2:74383736-74383755 None:intergenic 45.0%
AGATACATGTTGCCAGCTGA+TGG + chr5_2:74383797-74383816 None:intergenic 45.0%
TGGAGCGAACACAGGAAATA+TGG - chr5_2:74383871-74383890 Msa0788070:intron 45.0%
GGAGTGATATATGATCCCGA+AGG + chr5_2:74383911-74383930 None:intergenic 45.0%
GAGCTTCCAGTATTCACAGT+CGG + chr5_2:74383956-74383975 None:intergenic 45.0%
GTTGTCCAGTTGTGTAGATC+TGG + chr5_2:74384021-74384040 None:intergenic 45.0%
GATCTACACAACTGGACAAC+TGG - chr5_2:74384021-74384040 Msa0788070:intron 45.0%
TACACAACTGGACAACTGGT+TGG - chr5_2:74384025-74384044 Msa0788070:intron 45.0%
ATAGGCACAGATGGATGGAA+AGG + chr5_2:74384073-74384092 None:intergenic 45.0%
GTTGCAAACCGGACATATCT+TGG + chr5_2:74384297-74384316 None:intergenic 45.0%
CTATATAACCTTGCCCCTCA+AGG - chr5_2:74384325-74384344 Msa0788070:intron 45.0%
TTTCCCGGTATCTATCAACC+AGG - chr5_2:74384391-74384410 Msa0788070:intron 45.0%
TTCCCGGTATCTATCAACCA+GGG - chr5_2:74384392-74384411 Msa0788070:intron 45.0%
AGCTTGAGACTGCTGCAAAA+GGG + chr5_2:74384440-74384459 None:intergenic 45.0%
TACCGCCTTCTCAGATCAAT+TGG - chr5_2:74384512-74384531 Msa0788070:intron 45.0%
AGGCCAGTGTTCATTCTTCA+TGG + chr5_2:74384611-74384630 None:intergenic 45.0%
! CTCTCTGAAAGAATGAGCGG+CGG - chr5_2:74376580-74376599 Msa0788070:three_prime_UTR 50.0%
GATCTCTCTGATGTCGTGGA+TGG + chr5_2:74376662-74376681 None:intergenic 50.0%
CACGACATCAGAGAGATCAC+CGG - chr5_2:74376664-74376683 Msa0788070:three_prime_UTR 50.0%
!!! GTCGTCGGTGTGTTGTTTTC+CGG + chr5_2:74376686-74376705 None:intergenic 50.0%
GTCTTAACTCAAGCCGTGTG+TGG - chr5_2:74377233-74377252 Msa0788070:intron 50.0%
! TCAAGCCGTGTGTGGCTTTT+TGG - chr5_2:74377241-74377260 Msa0788070:intron 50.0%
GTACTACGGACCTGTTTGGA+TGG + chr5_2:74377571-74377590 None:intergenic 50.0%
!! AAGGGTACTACGGACCTGTT+TGG + chr5_2:74377575-74377594 None:intergenic 50.0%
CTGCTGCTCAATCCCTACAA+TGG + chr5_2:74378421-74378440 None:intergenic 50.0%
CATTGTAGGGATTGAGCAGC+AGG - chr5_2:74378419-74378438 Msa0788070:intron 50.0%
ATTGAGCAGCAGGGTTTCTG+AGG - chr5_2:74378429-74378448 Msa0788070:intron 50.0%
AAAACAACGTGGACAGGGGA+GGG - chr5_2:74378462-74378481 Msa0788070:intron 50.0%
! GAGGGGAGCAAGAGGTTTTT+CGG - chr5_2:74378480-74378499 Msa0788070:intron 50.0%
! AGGGGAGCAAGAGGTTTTTC+GGG - chr5_2:74378481-74378500 Msa0788070:intron 50.0%
! CATCTCTTGCTAGATGGTGG+TGG - chr5_2:74378966-74378985 Msa0788070:CDS 50.0%
GGAGGAACCTTCCTATTCGA+AGG - chr5_2:74378994-74379013 Msa0788070:CDS 50.0%
TCCAATGGGAAGTCTGGTCA+CGG - chr5_2:74379618-74379637 Msa0788070:intron 50.0%
AAGTCTGGTCACGGTTCTTC+TGG - chr5_2:74379627-74379646 Msa0788070:intron 50.0%
GCTGCAAGAACAACAGCTTG+AGG + chr5_2:74379735-74379754 None:intergenic 50.0%
TTCCTCTTCAGATCCTGTGC+TGG - chr5_2:74379857-74379876 Msa0788070:intron 50.0%
CCAGGAATCTGGGAGATAGA+TGG + chr5_2:74379885-74379904 None:intergenic 50.0%
CCATCTATCTCCCAGATTCC+TGG - chr5_2:74379882-74379901 Msa0788070:intron 50.0%
ATCTCCCAGATTCCTGGTGT+TGG - chr5_2:74379888-74379907 Msa0788070:intron 50.0%
GTGCTGTCAGTAGGGAAGTA+GGG - chr5_2:74379913-74379932 Msa0788070:intron 50.0%
GATTTGGCCCAGCAGATATC+CGG + chr5_2:74379944-74379963 None:intergenic 50.0%
GGACCCGGACTTATCATTCT+CGG + chr5_2:74380012-74380031 None:intergenic 50.0%
GTTGCAAGGGCTCAGATAAC+CGG + chr5_2:74380091-74380110 None:intergenic 50.0%
GAACTGAAGTAAAGCCCACC+GGG - chr5_2:74380349-74380368 Msa0788070:intron 50.0%
ATACTTTGGCTAGACCCGGT+GGG + chr5_2:74380366-74380385 None:intergenic 50.0%
ACCGGGTCTAGCCAAAGTAT+GGG - chr5_2:74380366-74380385 Msa0788070:intron 50.0%
TCCCATACTTTGGCTAGACC+CGG + chr5_2:74380370-74380389 None:intergenic 50.0%
! ACATCTGCAAACGCATCGAC+AGG + chr5_2:74380628-74380647 None:intergenic 50.0%
CTCAACTCAGTTGACTGCAC+AGG + chr5_2:74380694-74380713 None:intergenic 50.0%
CTGTGCAGTCAACTGAGTTG+AGG - chr5_2:74380692-74380711 Msa0788070:CDS 50.0%
AAGCCTCAGGCACTTGGAAA+TGG + chr5_2:74380738-74380757 None:intergenic 50.0%
!! GTGCCTGAGGCTTTAAAAGG+TGG - chr5_2:74380745-74380764 Msa0788070:CDS 50.0%
!!! CGGCACTCATTTTGAAACGG+AGG + chr5_2:74381101-74381120 None:intergenic 50.0%
AGGGATGTTTGAGAGTAGGG+AGG - chr5_2:74381669-74381688 Msa0788070:CDS 50.0%
TGTTTGAGAGTAGGGAGGAG+AGG - chr5_2:74381674-74381693 Msa0788070:CDS 50.0%
AGGAGAGGAGAAGGGTTTGA+TGG - chr5_2:74381689-74381708 Msa0788070:CDS 50.0%
GGAGAGGAGAAGGGTTTGAT+GGG - chr5_2:74381690-74381709 Msa0788070:CDS 50.0%
GAAGGGGAATGAAAGTAGGG+AGG - chr5_2:74381718-74381737 Msa0788070:CDS 50.0%
GGAATGAAAGTAGGGAGGAG+AGG - chr5_2:74381723-74381742 Msa0788070:CDS 50.0%
AAAGTAGGGAGGAGAGGAGA+AGG - chr5_2:74381729-74381748 Msa0788070:CDS 50.0%
AAGTAGGGAGGAGAGGAGAA+GGG - chr5_2:74381730-74381749 Msa0788070:CDS 50.0%
AGGAGAGGAGAAGGGTTTGA+TGG - chr5_2:74381689-74381708 Msa0788070:CDS 50.0%
GGAGAGGAGAAGGGTTTGAT+GGG - chr5_2:74381690-74381709 Msa0788070:CDS 50.0%
!! GGGAGAGTTTTTGAGAGGTG+TGG - chr5_2:74381795-74381814 Msa0788070:CDS 50.0%
AGGAGAGAATGAAGGGGAAG+GGG + chr5_2:74382005-74382024 None:intergenic 50.0%
GAGGAGAGAATGAAGGGGAA+GGG + chr5_2:74382006-74382025 None:intergenic 50.0%
AGAGGAGAGAATGAAGGGGA+AGG + chr5_2:74382007-74382026 None:intergenic 50.0%
GGGGAAAGAGGAGAGAATGA+AGG + chr5_2:74382013-74382032 None:intergenic 50.0%
TAAGGGAAGGCAGGGTTTGA+GGG + chr5_2:74382033-74382052 None:intergenic 50.0%
GAAATTGGGAGGGTAAGGGA+AGG + chr5_2:74382046-74382065 None:intergenic 50.0%
!! GGAGGTATTGTTAACTCCCG+AGG - chr5_2:74382385-74382404 Msa0788070:intron 50.0%
AGTCAGAATTGGATGGCCCT+CGG + chr5_2:74382405-74382424 None:intergenic 50.0%
AGCTCTGTAGAGGTGGAGTT+GGG + chr5_2:74383634-74383653 None:intergenic 50.0%
GGTATAGAGCTCTGTAGAGG+TGG + chr5_2:74383641-74383660 None:intergenic 50.0%
GGGAAGAAGTTAGCTGGGTA+TGG + chr5_2:74383698-74383717 None:intergenic 50.0%
GCTGTTGAGGGAAACCATTG+TGG + chr5_2:74383775-74383794 None:intergenic 50.0%
CAACATGTATCTACCAGCCG+CGG - chr5_2:74383805-74383824 Msa0788070:intron 50.0%
TTCGCTCCAGCCTTGAATTG+CGG + chr5_2:74383860-74383879 None:intergenic 50.0%
! CTAGGAGCATATCCAACAGG+TGG + chr5_2:74383932-74383951 None:intergenic 50.0%
! GGACTAGGAGCATATCCAAC+AGG + chr5_2:74383935-74383954 None:intergenic 50.0%
CCAGTATTCACAGTCGGACT+AGG + chr5_2:74383950-74383969 None:intergenic 50.0%
CCTAGTCCGACTGTGAATAC+TGG - chr5_2:74383947-74383966 Msa0788070:intron 50.0%
GTGAATACTGGAAGCTCTGC+CGG - chr5_2:74383959-74383978 Msa0788070:intron 50.0%
AAACCGGACATATCTTGGCC+TGG + chr5_2:74384292-74384311 None:intergenic 50.0%
AGGTGAGATGTTGCCCTTGA+GGG + chr5_2:74384342-74384361 None:intergenic 50.0%
AAGGTGAGATGTTGCCCTTG+AGG + chr5_2:74384343-74384362 None:intergenic 50.0%
!! TGCCCTGGTTGATAGATACC+GGG + chr5_2:74384397-74384416 None:intergenic 50.0%
!! CTGCCCTGGTTGATAGATAC+CGG + chr5_2:74384398-74384417 None:intergenic 50.0%
GACTGCTGCAAAAGGGTAGA+AGG + chr5_2:74384433-74384452 None:intergenic 50.0%
CAGCTTGAGACTGCTGCAAA+AGG + chr5_2:74384441-74384460 None:intergenic 50.0%
TGCTGATAAGATCCTGGAGG+CGG + chr5_2:74384490-74384509 None:intergenic 50.0%
AGCTGCTGATAAGATCCTGG+AGG + chr5_2:74384493-74384512 None:intergenic 50.0%
GGTAGCTGCTGATAAGATCC+TGG + chr5_2:74384496-74384515 None:intergenic 50.0%
AGGGGGGAAAGAACATGTGA+GGG + chr5_2:74384773-74384792 None:intergenic 50.0%
AAGGGGGGAAAGAACATGTG+AGG + chr5_2:74384774-74384793 None:intergenic 50.0%
CGGTGATCTCTCTGATGTCG+TGG + chr5_2:74376666-74376685 None:intergenic 55.0%
AGGTCCGTAGTACCCTTCGA+AGG - chr5_2:74377578-74377597 Msa0788070:CDS 55.0%
GGTCCGTAGTACCCTTCGAA+GGG - chr5_2:74377579-74377598 Msa0788070:CDS 55.0%
CAAAACAACGTGGACAGGGG+AGG - chr5_2:74378461-74378480 Msa0788070:intron 55.0%
AAACAACGTGGACAGGGGAG+GGG - chr5_2:74378463-74378482 Msa0788070:intron 55.0%
! GGGGAGCAAGAGGTTTTTCG+GGG - chr5_2:74378482-74378501 Msa0788070:intron 55.0%
!! GGGAGCAAGAGGTTTTTCGG+GGG - chr5_2:74378483-74378502 Msa0788070:intron 55.0%
!!! GGAGCAAGAGGTTTTTCGGG+GGG - chr5_2:74378484-74378503 Msa0788070:intron 55.0%
!! CTCTTGCTAGATGGTGGTGG+TGG - chr5_2:74378969-74378988 Msa0788070:CDS 55.0%
!! TTGCTAGATGGTGGTGGTGG+TGG - chr5_2:74378972-74378991 Msa0788070:CDS 55.0%
!! TGCTAGATGGTGGTGGTGGT+GGG - chr5_2:74378973-74378992 Msa0788070:CDS 55.0%
ACCGTGACCAGACTTCCCAT+TGG + chr5_2:74379622-74379641 None:intergenic 55.0%
TGCCAGCACAGGATCTGAAG+AGG + chr5_2:74379862-74379881 None:intergenic 55.0%
! GAGATAGATGGTGCCAGCAC+AGG + chr5_2:74379873-74379892 None:intergenic 55.0%
! TCCCAGATTCCTGGTGTTGG+CGG - chr5_2:74379891-74379910 Msa0788070:intron 55.0%
ACCGCCAACACCAGGAATCT+GGG + chr5_2:74379895-74379914 None:intergenic 55.0%
!! TGTTGGCGGTGCTGTCAGTA+GGG - chr5_2:74379905-74379924 Msa0788070:intron 55.0%
! GGTGCTGTCAGTAGGGAAGT+AGG - chr5_2:74379912-74379931 Msa0788070:intron 55.0%
GTAGGGAAGTAGGGAGTGAC+CGG - chr5_2:74379922-74379941 Msa0788070:intron 55.0%
GGAGTGACCGGATATCTGCT+GGG - chr5_2:74379934-74379953 Msa0788070:intron 55.0%
! AGGTGGTTGGCTAACGCAAC+TGG + chr5_2:74380138-74380157 None:intergenic 55.0%
TGCGTTAGCCAACCACCTCA+AGG - chr5_2:74380140-74380159 Msa0788070:intron 55.0%
CATACTTTGGCTAGACCCGG+TGG + chr5_2:74380367-74380386 None:intergenic 55.0%
CACCGGGTCTAGCCAAAGTA+TGG - chr5_2:74380365-74380384 Msa0788070:intron 55.0%
AGAGTAGGGAGGAGAGGAGA+AGG - chr5_2:74381680-74381699 Msa0788070:CDS 55.0%
GAGTAGGGAGGAGAGGAGAA+GGG - chr5_2:74381681-74381700 Msa0788070:CDS 55.0%
! TTTGAGAGGTGTGGAGGGGA+AGG - chr5_2:74381804-74381823 Msa0788070:CDS 55.0%
GGTGTGGAGGGGAAGGTTTA+TGG - chr5_2:74381811-74381830 Msa0788070:CDS 55.0%
! GGGGAGACTTTAGAGGGTTG+TGG + chr5_2:74381902-74381921 None:intergenic 55.0%
GAGAGAATGAAGGGGAAGGG+GGG + chr5_2:74382003-74382022 None:intergenic 55.0%
GGAGAGAATGAAGGGGAAGG+GGG + chr5_2:74382004-74382023 None:intergenic 55.0%
AAGGGAAGGCAGGGTTTGAG+GGG + chr5_2:74382032-74382051 None:intergenic 55.0%
GTAAGGGAAGGCAGGGTTTG+AGG + chr5_2:74382034-74382053 None:intergenic 55.0%
TGATCTCCGTGTTCGGGCAA+TGG + chr5_2:74382263-74382282 None:intergenic 55.0%
GATTGAGCAGCCAAAGCAGG+AGG - chr5_2:74382367-74382386 Msa0788070:intron 55.0%
GTCAGAATTGGATGGCCCTC+GGG + chr5_2:74382404-74382423 None:intergenic 55.0%
TGTAGAGGTGGAGTTGGGCT+GGG + chr5_2:74383629-74383648 None:intergenic 55.0%
GAGCTCTGTAGAGGTGGAGT+TGG + chr5_2:74383635-74383654 None:intergenic 55.0%
!! GAAACGGGCTGTGGAGAAAC+AGG + chr5_2:74383662-74383681 None:intergenic 55.0%
GGGGGTAATAGGGGCCATAT+GGG + chr5_2:74383718-74383737 None:intergenic 55.0%
TTCCCTCAACAGCCATCAGC+TGG - chr5_2:74383782-74383801 Msa0788070:intron 55.0%
TGCCAGCTGATGGCTGTTGA+GGG + chr5_2:74383787-74383806 None:intergenic 55.0%
TTGCCAGCTGATGGCTGTTG+AGG + chr5_2:74383788-74383807 None:intergenic 55.0%
GTTCCCTCTCCCGCAATTCA+AGG - chr5_2:74383847-74383866 Msa0788070:intron 55.0%
CAGCCTTGAATTGCGGGAGA+GGG + chr5_2:74383853-74383872 None:intergenic 55.0%
TCGCTCCAGCCTTGAATTGC+GGG + chr5_2:74383859-74383878 None:intergenic 55.0%
TTCAAGGCTGGAGCGAACAC+AGG - chr5_2:74383863-74383882 Msa0788070:intron 55.0%
AGAGTGAAGGCTCTGCTGTG+TGG - chr5_2:74384257-74384276 Msa0788070:intron 55.0%
GCTGTGTGGATACATGCACC+AGG - chr5_2:74384271-74384290 Msa0788070:intron 55.0%
GCACCAGGCCAAGATATGTC+CGG - chr5_2:74384286-74384305 Msa0788070:intron 55.0%
GGTGAGATGTTGCCCTTGAG+GGG + chr5_2:74384341-74384360 None:intergenic 55.0%
GGTGAAGTTACTGTCTGCCC+TGG + chr5_2:74384412-74384431 None:intergenic 55.0%
AGCAGTCTCAAGCTGTCGCT+GGG - chr5_2:74384446-74384465 Msa0788070:intron 55.0%
GCTGGGCCTGTTGAAACTGT+AGG - chr5_2:74384463-74384482 Msa0788070:intron 55.0%
GCTGATAAGATCCTGGAGGC+GGG + chr5_2:74384489-74384508 None:intergenic 55.0%
!! TGAAGGGTGCTGCTAGTTGC+AGG - chr5_2:74384707-74384726 Msa0788070:intron 55.0%
!! TAGATGGTGGTGGTGGTGGG+AGG - chr5_2:74378976-74378995 Msa0788070:CDS 60.0%
ATGCAGCACCCCAAGCCTCA+AGG - chr5_2:74379090-74379109 Msa0788070:CDS 60.0%
CACCGCCAACACCAGGAATC+TGG + chr5_2:74379896-74379915 None:intergenic 60.0%
!! GTGTTGGCGGTGCTGTCAGT+AGG - chr5_2:74379904-74379923 Msa0788070:intron 60.0%
GGGAGTGACCGGATATCTGC+TGG - chr5_2:74379933-74379952 Msa0788070:intron 60.0%
GGCAGGGTTTGAGGGGAAAG+AGG + chr5_2:74382025-74382044 None:intergenic 60.0%
TGGGAGGGTAAGGGAAGGCA+GGG + chr5_2:74382041-74382060 None:intergenic 60.0%
TTGGGAGGGTAAGGGAAGGC+AGG + chr5_2:74382042-74382061 None:intergenic 60.0%
GTTCGGGCAATGGCACGCTT+TGG + chr5_2:74382253-74382272 None:intergenic 60.0%
! AGCGTGCCATTGCCCGAACA+CGG - chr5_2:74382254-74382273 Msa0788070:intron 60.0%
CTGTAGAGGTGGAGTTGGGC+TGG + chr5_2:74383630-74383649 None:intergenic 60.0%
GGGGGGTAATAGGGGCCATA+TGG + chr5_2:74383719-74383738 None:intergenic 60.0%
CCAGCCTTGAATTGCGGGAG+AGG + chr5_2:74383854-74383873 None:intergenic 60.0%
CCTCTCCCGCAATTCAAGGC+TGG - chr5_2:74383851-74383870 Msa0788070:intron 60.0%
GATGTTGCCCTTGAGGGGCA+AGG + chr5_2:74384336-74384355 None:intergenic 60.0%
TCTCACCTTCCCCCAGACAC+AGG - chr5_2:74384354-74384373 Msa0788070:intron 60.0%
TCCGTGAGCAGCCTGTGTCT+GGG + chr5_2:74384368-74384387 None:intergenic 60.0%
! GCTGCTCACGGAGCATTTCC+CGG - chr5_2:74384376-74384395 Msa0788070:intron 60.0%
CAGCAGTCTCAAGCTGTCGC+TGG - chr5_2:74384445-74384464 Msa0788070:intron 60.0%
GGCGGGCCTACAGTTTCAAC+AGG + chr5_2:74384472-74384491 None:intergenic 60.0%
GAAAGAATGAGCGGCGGCCG+CGG - chr5_2:74376586-74376605 Msa0788070:three_prime_UTR 65.0%
!! TGGTGGTGGTGGCGGGTCTA+GGG - chr5_2:74376609-74376628 Msa0788070:three_prime_UTR 65.0%
CTGACAGCACCGCCAACACC+AGG + chr5_2:74379903-74379922 None:intergenic 65.0%
AGCAGCCTGTGTCTGGGGGA+AGG + chr5_2:74384362-74384381 None:intergenic 65.0%
CGTGAGCAGCCTGTGTCTGG+GGG + chr5_2:74384366-74384385 None:intergenic 65.0%
CCGTGAGCAGCCTGTGTCTG+GGG + chr5_2:74384367-74384386 None:intergenic 65.0%
CCCCAGACACAGGCTGCTCA+CGG - chr5_2:74384364-74384383 Msa0788070:intron 65.0%
CTCCGTGAGCAGCCTGTGTC+TGG + chr5_2:74384369-74384388 None:intergenic 65.0%
GAAACTGTAGGCCCGCCTCC+AGG - chr5_2:74384475-74384494 Msa0788070:intron 65.0%
!! GTGGTGGTGGTGGCGGGTCT+AGG - chr5_2:74376608-74376627 Msa0788070:three_prime_UTR 70.0%
GGACAGGGGAGGGGAGCAAG+AGG - chr5_2:74378472-74378491 Msa0788070:intron 70.0%
GATCCCAGCAGCTGCAGCCG+CGG + chr5_2:74383825-74383844 None:intergenic 70.0%
AGAATGAGCGGCGGCCGCGG+TGG - chr5_2:74376589-74376608 Msa0788070:three_prime_UTR 75.0%
ACCCGCCACCACCACCACCG+CGG + chr5_2:74376606-74376625 None:intergenic 75.0%
CAGCCGCGGCTGCAGCTGCT+GGG - chr5_2:74383819-74383838 Msa0788070:intron 75.0%
! ATGAGCGGCGGCCGCGGTGG+TGG - chr5_2:74376592-74376611 Msa0788070:three_prime_UTR 80.0%
!!! GGCCGCGGTGGTGGTGGTGG+CGG - chr5_2:74376601-74376620 Msa0788070:three_prime_UTR 80.0%
!!! GCCGCGGTGGTGGTGGTGGC+GGG - chr5_2:74376602-74376621 Msa0788070:three_prime_UTR 80.0%
! CCAGCAGCTGCAGCCGCGGC+TGG + chr5_2:74383821-74383840 None:intergenic 80.0%
! CCAGCCGCGGCTGCAGCTGC+TGG - chr5_2:74383818-74383837 Msa0788070:intron 80.0%
!! AGCGGCGGCCGCGGTGGTGG+TGG - chr5_2:74376595-74376614 Msa0788070:three_prime_UTR 85.0%
!!! GGCGGCCGCGGTGGTGGTGG+TGG - chr5_2:74376598-74376617 Msa0788070:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 74376515 74384988 74376515 ID=Msa0788070;Name=Msa0788070
chr5_2 mRNA 74376515 74384988 74376515 ID=Msa0788070-mRNA-1;Parent=Msa0788070;Name=Msa0788070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=77|0.87|0.88|1|1|1|9|439|801
chr5_2 exon 74376515 74377244 74376515 ID=Msa0788070-mRNA-1:exon:22705;Parent=Msa0788070-mRNA-1
chr5_2 exon 74377461 74377901 74377461 ID=Msa0788070-mRNA-1:exon:22704;Parent=Msa0788070-mRNA-1
chr5_2 exon 74378959 74379256 74378959 ID=Msa0788070-mRNA-1:exon:22703;Parent=Msa0788070-mRNA-1
chr5_2 exon 74380610 74380859 74380610 ID=Msa0788070-mRNA-1:exon:22702;Parent=Msa0788070-mRNA-1
chr5_2 exon 74381258 74381922 74381258 ID=Msa0788070-mRNA-1:exon:22701;Parent=Msa0788070-mRNA-1
chr5_2 exon 74382392 74382524 74382392 ID=Msa0788070-mRNA-1:exon:22700;Parent=Msa0788070-mRNA-1
chr5_2 exon 74382977 74383076 74382977 ID=Msa0788070-mRNA-1:exon:22699;Parent=Msa0788070-mRNA-1
chr5_2 exon 74383667 74383710 74383667 ID=Msa0788070-mRNA-1:exon:22698;Parent=Msa0788070-mRNA-1
chr5_2 exon 74384728 74384988 74384728 ID=Msa0788070-mRNA-1:exon:22697;Parent=Msa0788070-mRNA-1
chr5_2 five_prime_UTR 74384912 74384988 74384912 ID=Msa0788070-mRNA-1:five_prime_utr;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74384728 74384911 74384728 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74383667 74383710 74383667 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74382977 74383076 74382977 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74382392 74382524 74382392 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74381258 74381922 74381258 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74380610 74380859 74380610 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74378959 74379256 74378959 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74377461 74377901 74377461 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 CDS 74376954 74377244 74376954 ID=Msa0788070-mRNA-1:cds;Parent=Msa0788070-mRNA-1
chr5_2 three_prime_UTR 74376515 74376953 74376515 ID=Msa0788070-mRNA-1:three_prime_utr;Parent=Msa0788070-mRNA-1
Gene Sequence

>Msa0788070

ATGAGCGGCGGCCGCGGTGGTGGTGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCATCCACGACATCAGAGAGATCACCGGAAAACAACACACCGACGACGAAATCTTCTCCGTTCTTAAAGAATCAAACATGGATCCCAATGAAACTACTCAAAAGCTTCTCTATTTAGATACTTTTCATGAAGTAAGAAGGAGACGCGACCGCAGAAAAGAAGGATTGAGCAGCAGGGTTTCTGAGGAGTCTAGATCAAAACAACGTGGACAGGGGAGGGGAGCAAGAGGTTTTTCGGGGGGCTATTCCTCAAACTTTCCTGATGGTGGTGGTGGTGGGAGGAACCTTCCTATTCGAAGGGAAAATGGAGTCCATCACATTGCAGAGAGAACTCATGCTTCCTCTACTCAGCCAGATTTACAGAAAAACACTAATGCAGCACCCCAAGCCTCAAGAGGTTCAGCTGTTGCACCCCGTAGTGCTGCAAATCAATCCAATGGGAAGTCTGGTCACGGTTCTTCTGGCCAATCTCTCATAGGTAGTGTTGTTAGTGTCCCACAAAGCAGTTCAGCTTCTAATGACACTGTCAATCAAGAAACTGTGCAACCTCAAGCTGTTGTTCTTGCAGCAACCACTTCTCCTACTCAAACCTTTGCCTCAATTACAAGAACTGACCAAGGAAAATCTCTCTCAAGTTCTGATCAACATCAAATTTCTGTACCGGGTGTTTGTTCCTCTTCAGATCCTGTGCTGGCACCATCTATCTCCCAGATTCCTGGTGTTGGCGGTGCTGTCAGTAGGGAAGTAGGGAGTGACCGGATATCTGCTGGGCCAAATCATGTTAAAGGAAACAAACTTGAAGAAGCTGGTGATTTATCAGCATCCGAGAATGATAAGTCCGGGTCCATGAATTCAACAAGCAACCCGAATGCAATACCAAAGTCAAATGAAGTTGAAAGTAACCGGTTATCTGAGCCCTTGCAACTCTCATCGTCTTCATCATTGACTTCCAGTTGCGTTAGCCAACCACCTCAAGGTAAAGTTTTTATTCCATACCTGTTAAATCTTATAAAGAAATTGTTTGACGTAACTGTTTCCATCTCCTCAATTTCTGGTTTAGATGTTTCTAAAACAGCCAATGTCACAGAGGTCTCAACTTCAGAAGCTCCTGTGCAGTCAACTGAGTTGAGGCAACATGTTACTTTTCCAAACCATTTCCAAGTGCCTGAGGCTTTAAAAGGTGGTCTGACATTTGGAAGCTTCGATACTTTTGATCCAAGTGAAAAATCTAGCAGTGTAACTGGTTGTGACAATAGCACTTCTCCCACTCCTGAATCTTCTTCAGTGAATGCTGAAACTGTTAATTCAAGCAACCAAAGCGTGCCATTGCCCGAACACGGAGATCATCTTGATCATGCACATTCTTCATCTTATTTAATTAAAGAGACACTAGCTTCTGAAGGCATATCTATAACTGGTAATGATTCAAAGATTGAGCAGCCAAAGCAGGAGGTATTGTTAACTCCCGAGGGCCATCCAATTCTGACTGTTCAAAGTGCTCAAAACTATGGTTTGAATTTCATGTCTACCATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGCTTCAGGCGCAAGAAACACCACACTTCCCTTCCTTTGTTACTGCAAGTTCTCAGGCTGTGTCTCCCAGCCCAACTCCACCTCTACAGAGCTCTATACCTGTTTCTCCACAGCCCGTTTCTTATTTTAGGCCACCATACCCAGCTAACTTCTTCCCATATGGCCCCTATTACCCCCCAATTTACCTGTCTCCAATGCATCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAGCCGCGGCTGCAGCTGCTGGGATCAAGTTCCCTCTCCCGCAATTCAAGGCTGGAGCGAACACAGGAAATATGGCTCATATTGGAATTCCTTCGGGATCATATATCACTCCACCTGTTGGATATGCTCCTAGTCCGACTGTGAATACTGGAAGCTCTGCCGGAAATGAAGATACTGCAGTGTCTCAGTTGAAAGAAAACCAGATCTACACAACTGGACAACTGAGTGAAGGCTCTGCTGTGTGGATACATGCACCAGGCCAAGATATGTCCGGTTTGCAACTTAATTCTCTATATAACCTTGCCCCTCAAGGGCAACATCTCACCTTCCCCCAGACACAGGCTGCTCACGGAGCATTTCCCGGTATCTATCAACCAGGGCAGACAGTAACTTCACCTTCTACCCTTTTGCAGCAGTCTCAAGCTGTCGCTGGGCCTGTTGAAACTGTAGGCCCGCCTCCAGGATCTTATCAGCAGCTACCGCCTTCTCAGATCAATTGGAATTCTAATTTTTAG
Protein sequence

>Msa0788070

MSGGRGGGGGGSRVPIPNNVRKTIHDIREITGKQHTDDEIFSVLKESNMDPNETTQKLLYLDTFHEVRRRRDRRKEGLSSRVSEESRSKQRGQGRGARGFSGGYSSNFPDGGGGGRNLPIRRENGVHHIAERTHASSTQPDLQKNTNAAPQASRGSAVAPRSAANQSNGKSGHGSSGQSLIGSVVSVPQSSSASNDTVNQETVQPQAVVLAATTSPTQTFASITRTDQGKSLSSSDQHQISVPGVCSSSDPVLAPSISQIPGVGGAVSREVGSDRISAGPNHVKGNKLEEAGDLSASENDKSGSMNSTSNPNAIPKSNEVESNRLSEPLQLSSSSSLTSSCVSQPPQGKVFIPYLLNLIKKLFDVTVSISSISGLDVSKTANVTEVSTSEAPVQSTELRQHVTFPNHFQVPEALKGGLTFGSFDTFDPSEKSSSVTGCDNSTSPTPESSSVNAETVNSSNQSVPLPEHGDHLDHAHSSSYLIKETLASEGISITGNDSKIEQPKQEVLLTPEGHPILTVQSAQNYGLNFMSTMLGTQQVQFEGSELQAQETPHFPSFVTASSQAVSPSPTPPLQSSIPVSPQPVSYFRPPYPANFFPYGPYYPPIYLSPMHQFLSHNGFPQQPSAGNMYLPAAAAAAGIKFPLPQFKAGANTGNMAHIGIPSGSYITPPVGYAPSPTVNTGSSAGNEDTAVSQLKENQIYTTGQLSEGSAVWIHAPGQDMSGLQLNSLYNLAPQGQHLTFPQTQAAHGAFPGIYQPGQTVTSPSTLLQQSQAVAGPVETVGPPPGSYQQLPPSQINWNSNF*