Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477260 | XP_003603563.1 | 96.947 | 393 | 10 | 2 | 1 | 392 | 1 | 392 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477260 | sp|Q8VZQ0|NRX3_ARATH | 59.309 | 376 | 152 | 1 | 11 | 385 | 11 | 386 | 6.72e-169 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477260 | G7J2U5 | 96.947 | 393 | 10 | 2 | 1 | 392 | 1 | 392 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0477260 | 0.805513 | 1.287314e-49 | -8.615850e-47 |
| Msa0010760 | Msa0477260 | 0.801685 | 8.013113e-49 | -8.615850e-47 |
| Msa0014800 | Msa0477260 | 0.804505 | 2.091978e-49 | -8.615850e-47 |
| Msa0015090 | Msa0477260 | 0.851257 | 9.985142e-61 | -8.615850e-47 |
| Msa0017320 | Msa0477260 | 0.802147 | 6.439554e-49 | -8.615850e-47 |
| Msa0018210 | Msa0477260 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
| Msa0032860 | Msa0477260 | 0.804939 | 1.697926e-49 | -8.615850e-47 |
| Msa0032880 | Msa0477260 | 0.818540 | 1.858606e-52 | -8.615850e-47 |
| Msa0037840 | Msa0477260 | 0.803753 | 2.998849e-49 | -8.615850e-47 |
| Msa0037880 | Msa0477260 | 0.837714 | 4.416312e-57 | -8.615850e-47 |
| Msa0043730 | Msa0477260 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
| Msa0043980 | Msa0477260 | 0.806308 | 8.761102e-50 | -8.615850e-47 |
| Msa0049750 | Msa0477260 | 0.852665 | 3.977229e-61 | -8.615850e-47 |
| Msa0051210 | Msa0477260 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
| Msa0051450 | Msa0477260 | 0.834199 | 3.440864e-56 | -8.615850e-47 |
| Msa0051860 | Msa0477260 | 0.819996 | 8.658365e-53 | -8.615850e-47 |
| Msa0051930 | Msa0477260 | 0.810399 | 1.175204e-50 | -8.615850e-47 |
| Msa0052030 | Msa0477260 | 0.831216 | 1.892473e-55 | -8.615850e-47 |
| Msa0056030 | Msa0477260 | 0.806665 | 7.368447e-50 | -8.615850e-47 |
| Msa0061150 | Msa0477260 | 0.834518 | 2.862221e-56 | -8.615850e-47 |
| Msa0062490 | Msa0477260 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa0064300 | Msa0477260 | 0.813510 | 2.468344e-51 | -8.615850e-47 |
| Msa0065650 | Msa0477260 | 0.804682 | 1.921090e-49 | -8.615850e-47 |
| Msa0065950 | Msa0477260 | 0.825647 | 4.182189e-54 | -8.615850e-47 |
| Msa0078750 | Msa0477260 | 0.819321 | 1.235059e-52 | -8.615850e-47 |
| Msa0084430 | Msa0477260 | 0.828055 | 1.111877e-54 | -8.615850e-47 |
| Msa0086420 | Msa0477260 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
| Msa0092990 | Msa0477260 | 0.822568 | 2.209957e-53 | -8.615850e-47 |
| Msa0094920 | Msa0477260 | 0.803695 | 3.083743e-49 | -8.615850e-47 |
| Msa0096030 | Msa0477260 | 0.814249 | 1.696166e-51 | -8.615850e-47 |
| Msa0096980 | Msa0477260 | 0.820437 | 6.861451e-53 | -8.615850e-47 |
| Msa0101830 | Msa0477260 | 0.838713 | 2.442417e-57 | -8.615850e-47 |
| Msa0102120 | Msa0477260 | 0.812308 | 4.526963e-51 | -8.615850e-47 |
| Msa0104800 | Msa0477260 | 0.801173 | 1.020229e-48 | -8.615850e-47 |
| Msa0105700 | Msa0477260 | 0.849085 | 4.055689e-60 | -8.615850e-47 |
| Msa0107400 | Msa0477260 | 0.802002 | 6.897855e-49 | -8.615850e-47 |
| Msa0108560 | Msa0477260 | 0.836907 | 7.105853e-57 | -8.615850e-47 |
| Msa0109590 | Msa0477260 | 0.805904 | 1.065643e-49 | -8.615850e-47 |
| Msa0120340 | Msa0477260 | 0.832846 | 7.487837e-56 | -8.615850e-47 |
| Msa0124550 | Msa0477260 | 0.805426 | 1.342313e-49 | -8.615850e-47 |
| Msa0130520 | Msa0477260 | 0.827859 | 1.239749e-54 | -8.615850e-47 |
| Msa0137570 | Msa0477260 | 0.820463 | 6.768485e-53 | -8.615850e-47 |
| Msa0142280 | Msa0477260 | 0.802859 | 4.592493e-49 | -8.615850e-47 |
| Msa0143930 | Msa0477260 | 0.808438 | 3.097287e-50 | -8.615850e-47 |
| Msa0145010 | Msa0477260 | 0.819831 | 9.444065e-53 | -8.615850e-47 |
| Msa0152170 | Msa0477260 | 0.847769 | 9.374508e-60 | -8.615850e-47 |
| Msa0153830 | Msa0477260 | 0.846616 | 1.941839e-59 | -8.615850e-47 |
| Msa0155340 | Msa0477260 | 0.820609 | 6.264883e-53 | -8.615850e-47 |
| Msa0159770 | Msa0477260 | 0.803211 | 3.884316e-49 | -8.615850e-47 |
| Msa0165970 | Msa0477260 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0169820 | Msa0477260 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0175050 | Msa0477260 | 0.814169 | 1.766334e-51 | -8.615850e-47 |
| Msa0176330 | Msa0477260 | 0.822146 | 2.769185e-53 | -8.615850e-47 |
| Msa0182570 | Msa0477260 | 0.811658 | 6.270167e-51 | -8.615850e-47 |
| Msa0187060 | Msa0477260 | 0.820014 | 8.580662e-53 | -8.615850e-47 |
| Msa0187220 | Msa0477260 | 0.809406 | 1.922660e-50 | -8.615850e-47 |
| Msa0187250 | Msa0477260 | 0.806886 | 6.617136e-50 | -8.615850e-47 |
| Msa0190250 | Msa0477260 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0206010 | Msa0477260 | 0.828980 | 6.649725e-55 | -8.615850e-47 |
| Msa0216530 | Msa0477260 | 0.818491 | 1.906286e-52 | -8.615850e-47 |
| Msa0217680 | Msa0477260 | 0.819413 | 1.176884e-52 | -8.615850e-47 |
| Msa0220440 | Msa0477260 | 0.814062 | 1.865459e-51 | -8.615850e-47 |
| Msa0225470 | Msa0477260 | 0.831567 | 1.551653e-55 | -8.615850e-47 |
| Msa0226180 | Msa0477260 | 0.807114 | 5.919847e-50 | -8.615850e-47 |
| Msa0365490 | Msa0477260 | 0.807886 | 4.059157e-50 | -8.615850e-47 |
| Msa0376910 | Msa0477260 | 0.820587 | 6.338939e-53 | -8.615850e-47 |
| Msa0379640 | Msa0477260 | 0.819636 | 1.046834e-52 | -8.615850e-47 |
| Msa0380040 | Msa0477260 | 0.801683 | 8.019055e-49 | -8.615850e-47 |
| Msa0383350 | Msa0477260 | 0.836400 | 9.566511e-57 | -8.615850e-47 |
| Msa0388840 | Msa0477260 | 0.817786 | 2.753209e-52 | -8.615850e-47 |
| Msa0389810 | Msa0477260 | 0.873299 | 1.637472e-67 | -8.615850e-47 |
| Msa0394340 | Msa0477260 | 0.880869 | 3.845752e-70 | -8.615850e-47 |
| Msa0404000 | Msa0477260 | 0.809328 | 1.998067e-50 | -8.615850e-47 |
| Msa0404030 | Msa0477260 | 0.818180 | 2.241969e-52 | -8.615850e-47 |
| Msa0412840 | Msa0477260 | 0.826454 | 2.688486e-54 | -8.615850e-47 |
| Msa0427910 | Msa0477260 | 0.812226 | 4.715636e-51 | -8.615850e-47 |
| Msa0429950 | Msa0477260 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
| Msa0433530 | Msa0477260 | 0.968927 | 2.232019e-129 | -8.615850e-47 |
| Msa0436190 | Msa0477260 | 0.829477 | 5.036230e-55 | -8.615850e-47 |
| Msa0438040 | Msa0477260 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
| Msa0440600 | Msa0477260 | 0.808013 | 3.814883e-50 | -8.615850e-47 |
| Msa0442200 | Msa0477260 | 0.852918 | 3.367170e-61 | -8.615850e-47 |
| Msa0453350 | Msa0477260 | 0.811729 | 6.052537e-51 | -8.615850e-47 |
| Msa0457510 | Msa0477260 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0464900 | Msa0477260 | 0.808819 | 2.567248e-50 | -8.615850e-47 |
| Msa0468130 | Msa0477260 | 0.870448 | 1.448281e-66 | -8.615850e-47 |
| Msa0471900 | Msa0477260 | 0.816759 | 4.685386e-52 | -8.615850e-47 |
| Msa0472960 | Msa0477260 | -0.824812 | 6.589434e-54 | -8.615850e-47 |
| Msa0477130 | Msa0477260 | -0.804537 | 2.059578e-49 | -8.615850e-47 |
| Msa0477260 | Msa0482190 | -0.825631 | 4.219735e-54 | -8.615850e-47 |
| Msa0477260 | Msa0484780 | 0.811659 | 6.267319e-51 | -8.615850e-47 |
| Msa0477260 | Msa0485120 | 0.800471 | 1.419211e-48 | -8.615850e-47 |
| Msa0477260 | Msa0485490 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
| Msa0477260 | Msa0485500 | -0.817257 | 3.622706e-52 | -8.615850e-47 |
| Msa0477260 | Msa0488270 | 0.844817 | 5.975721e-59 | -8.615850e-47 |
| Msa0477260 | Msa0489610 | 0.883931 | 2.953695e-71 | -8.615850e-47 |
| Msa0477260 | Msa0500720 | 0.821891 | 3.171759e-53 | -8.615850e-47 |
| Msa0477260 | Msa0524600 | 0.826327 | 2.882769e-54 | -8.615850e-47 |
| Msa0477260 | Msa0526410 | 0.818229 | 2.185972e-52 | -8.615850e-47 |
| Msa0477260 | Msa0530650 | 0.817140 | 3.848782e-52 | -8.615850e-47 |
| Msa0477260 | Msa0531550 | 0.822343 | 2.492709e-53 | -8.615850e-47 |
| Msa0477260 | Msa0534410 | 0.860130 | 2.560289e-63 | -8.615850e-47 |
| Msa0477260 | Msa0549780 | 0.801020 | 1.096528e-48 | -8.615850e-47 |
| Msa0477260 | Msa0562440 | 0.824915 | 6.232351e-54 | -8.615850e-47 |
| Msa0477260 | Msa0566350 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0477260 | Msa0566750 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0477260 | Msa0568240 | 0.807387 | 5.180820e-50 | -8.615850e-47 |
| Msa0477260 | Msa0570330 | 0.837194 | 6.001848e-57 | -8.615850e-47 |
| Msa0477260 | Msa0580530 | 0.805084 | 1.583428e-49 | -8.615850e-47 |
| Msa0477260 | Msa0587030 | 0.825020 | 5.885840e-54 | -8.615850e-47 |
| Msa0477260 | Msa0587190 | 0.824257 | 8.903865e-54 | -8.615850e-47 |
| Msa0477260 | Msa0588240 | 0.844392 | 7.778742e-59 | -8.615850e-47 |
| Msa0477260 | Msa0590650 | 0.837009 | 6.692025e-57 | -8.615850e-47 |
| Msa0477260 | Msa0591710 | 0.817080 | 3.968977e-52 | -8.615850e-47 |
| Msa0477260 | Msa0599580 | 0.818422 | 1.977010e-52 | -8.615850e-47 |
| Msa0477260 | Msa0608710 | 0.849031 | 4.196061e-60 | -8.615850e-47 |
| Msa0477260 | Msa0615340 | 0.818763 | 1.653957e-52 | -8.615850e-47 |
| Msa0477260 | Msa0620960 | 0.800587 | 1.343906e-48 | -8.615850e-47 |
| Msa0477260 | Msa0621790 | 0.816683 | 4.873132e-52 | -8.615850e-47 |
| Msa0477260 | Msa0626850 | 0.820029 | 8.512601e-53 | -8.615850e-47 |
| Msa0477260 | Msa0626990 | 0.812274 | 4.602866e-51 | -8.615850e-47 |
| Msa0477260 | Msa0627350 | 0.813594 | 2.365008e-51 | -8.615850e-47 |
| Msa0477260 | Msa0628740 | 0.843670 | 1.214556e-58 | -8.615850e-47 |
| Msa0477260 | Msa0630950 | 0.851745 | 7.265808e-61 | -8.615850e-47 |
| Msa0477260 | Msa0631980 | 0.824840 | 6.491025e-54 | -8.615850e-47 |
| Msa0477260 | Msa0631990 | 0.818905 | 1.535546e-52 | -8.615850e-47 |
| Msa0477260 | Msa0649130 | 0.806244 | 9.037893e-50 | -8.615850e-47 |
| Msa0477260 | Msa0649350 | 0.810513 | 1.110667e-50 | -8.615850e-47 |
| Msa0477260 | Msa0653490 | 0.840659 | 7.612603e-58 | -8.615850e-47 |
| Msa0477260 | Msa0660300 | 0.828677 | 7.869536e-55 | -8.615850e-47 |
| Msa0477260 | Msa0662650 | 0.807530 | 4.832948e-50 | -8.615850e-47 |
| Msa0477260 | Msa0664970 | 0.810782 | 9.714402e-51 | -8.615850e-47 |
| Msa0477260 | Msa0666140 | 0.843048 | 1.780232e-58 | -8.615850e-47 |
| Msa0477260 | Msa0669190 | 0.809085 | 2.251862e-50 | -8.615850e-47 |
| Msa0477260 | Msa0670660 | 0.837631 | 4.638654e-57 | -8.615850e-47 |
| Msa0477260 | Msa0673470 | 0.823732 | 1.182018e-53 | -8.615850e-47 |
| Msa0477260 | Msa0679550 | 0.834627 | 2.686053e-56 | -8.615850e-47 |
| Msa0477260 | Msa0692110 | 0.835080 | 2.065722e-56 | -8.615850e-47 |
| Msa0477260 | Msa0696420 | 0.801600 | 8.340137e-49 | -8.615850e-47 |
| Msa0477260 | Msa0704730 | 0.825712 | 4.036641e-54 | -8.615850e-47 |
| Msa0477260 | Msa0708860 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0477260 | Msa0715410 | 0.808143 | 3.580165e-50 | -8.615850e-47 |
| Msa0477260 | Msa0721340 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0477260 | Msa0724560 | 0.801557 | 8.510467e-49 | -8.615850e-47 |
| Msa0477260 | Msa0726830 | 0.804138 | 2.494752e-49 | -8.615850e-47 |
| Msa0477260 | Msa0731180 | 0.854268 | 1.378684e-61 | -8.615850e-47 |
| Msa0477260 | Msa0742150 | 0.802720 | 4.906821e-49 | -8.615850e-47 |
| Msa0477260 | Msa0747260 | 0.841542 | 4.460105e-58 | -8.615850e-47 |
| Msa0477260 | Msa0748070 | 0.806171 | 9.364280e-50 | -8.615850e-47 |
| Msa0477260 | Msa0751210 | 0.814996 | 1.159110e-51 | -8.615850e-47 |
| Msa0477260 | Msa0754920 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0477260 | Msa0763400 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa0477260 | Msa0765180 | 0.823656 | 1.231713e-53 | -8.615850e-47 |
| Msa0477260 | Msa0771580 | 0.842823 | 2.043301e-58 | -8.615850e-47 |
| Msa0477260 | Msa0771720 | 0.820497 | 6.647260e-53 | -8.615850e-47 |
| Msa0477260 | Msa0773840 | 0.805794 | 1.123884e-49 | -8.615850e-47 |
| Msa0477260 | Msa0786070 | 0.806290 | 8.837268e-50 | -8.615850e-47 |
| Msa0477260 | Msa0788540 | 0.827330 | 1.660293e-54 | -8.615850e-47 |
| Msa0477260 | Msa0792090 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa0477260 | Msa0793380 | 0.826181 | 3.122665e-54 | -8.615850e-47 |
| Msa0477260 | Msa0794320 | 0.824764 | 6.763864e-54 | -8.615850e-47 |
| Msa0477260 | Msa0795080 | 0.827783 | 1.292931e-54 | -8.615850e-47 |
| Msa0477260 | Msa0795720 | 0.818657 | 1.748259e-52 | -8.615850e-47 |
| Msa0477260 | Msa0801740 | 0.815113 | 1.091757e-51 | -8.615850e-47 |
| Msa0477260 | Msa0805920 | 0.824946 | 6.126908e-54 | -8.615850e-47 |
| Msa0477260 | Msa0820850 | 0.818085 | 2.355780e-52 | -8.615850e-47 |
| Msa0477260 | Msa0831590 | 0.816563 | 5.185845e-52 | -8.615850e-47 |
| Msa0477260 | Msa0833460 | 0.821191 | 4.603302e-53 | -8.615850e-47 |
| Msa0477260 | Msa0842770 | 0.802613 | 5.163208e-49 | -8.615850e-47 |
| Msa0477260 | Msa0844110 | 0.801011 | 1.101137e-48 | -8.615850e-47 |
| Msa0477260 | Msa0849030 | 0.804459 | 2.138981e-49 | -8.615850e-47 |
| Msa0477260 | Msa0861130 | 0.824315 | 8.625430e-54 | -8.615850e-47 |
| Msa0477260 | Msa0861470 | 0.805469 | 1.314848e-49 | -8.615850e-47 |
| Msa0477260 | Msa0861570 | 0.802573 | 5.262976e-49 | -8.615850e-47 |
| Msa0477260 | Msa0862280 | 0.801258 | 9.802117e-49 | -8.615850e-47 |
| Msa0477260 | Msa0869120 | 0.823608 | 1.263641e-53 | -8.615850e-47 |
| Msa0477260 | Msa0871990 | 0.807091 | 5.986342e-50 | -8.615850e-47 |
| Msa0477260 | Msa0872440 | 0.806713 | 7.197329e-50 | -8.615850e-47 |
| Msa0477260 | Msa0876360 | 0.829206 | 5.859872e-55 | -8.615850e-47 |
| Msa0477260 | Msa0876580 | 0.800966 | 1.124808e-48 | -8.615850e-47 |
| Msa0477260 | Msa0879860 | 0.806541 | 7.823997e-50 | -8.615850e-47 |
| Msa0477260 | Msa0882510 | 0.815013 | 1.149210e-51 | -8.615850e-47 |
| Msa0477260 | Msa0905380 | 0.808805 | 2.585303e-50 | -8.615850e-47 |
| Msa0477260 | Msa0927670 | 0.806386 | 8.436853e-50 | -8.615850e-47 |
| Msa0477260 | Msa0935850 | 0.820637 | 6.174300e-53 | -8.615850e-47 |
| Msa0477260 | Msa0937330 | 0.809406 | 1.922319e-50 | -8.615850e-47 |
| Msa0477260 | Msa0944550 | 0.828841 | 7.183672e-55 | -8.615850e-47 |
| Msa0477260 | Msa0947760 | 0.827633 | 1.404862e-54 | -8.615850e-47 |
| Msa0477260 | Msa0958920 | 0.818139 | 2.290215e-52 | -8.615850e-47 |
| Msa0477260 | Msa0960160 | 0.819839 | 9.408106e-53 | -8.615850e-47 |
| Msa0477260 | Msa0971020 | 0.824536 | 7.654015e-54 | -8.615850e-47 |
| Msa0477260 | Msa0974630 | 0.809275 | 2.050791e-50 | -8.615850e-47 |
| Msa0477260 | Msa0976250 | 0.802843 | 4.627898e-49 | -8.615850e-47 |
| Msa0477260 | Msa0978700 | 0.819474 | 1.139676e-52 | -8.615850e-47 |
| Msa0477260 | Msa0982270 | 0.865256 | 6.738296e-65 | -8.615850e-47 |
| Msa0477260 | Msa0994370 | 0.823113 | 1.649947e-53 | -8.615850e-47 |
| Msa0477260 | Msa0996170 | 0.805767 | 1.138566e-49 | -8.615850e-47 |
| Msa0477260 | Msa1005410 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0477260 | Msa1012830 | 0.817030 | 4.074270e-52 | -8.615850e-47 |
| Msa0477260 | Msa1013070 | 0.809976 | 1.449925e-50 | -8.615850e-47 |
| Msa0477260 | Msa1023180 | 0.876626 | 1.202232e-68 | -8.615850e-47 |
| Msa0477260 | Msa1029080 | -0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa0477260 | Msa1034150 | 0.813375 | 2.642580e-51 | -8.615850e-47 |
| Msa0477260 | Msa1039880 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0477260 | Msa1043050 | 0.871477 | 6.631650e-67 | -8.615850e-47 |
| Msa0477260 | Msa1047720 | 0.804154 | 2.475104e-49 | -8.615850e-47 |
| Msa0477260 | Msa1063510 | 0.803226 | 3.856950e-49 | -8.615850e-47 |
| Msa0477260 | Msa1071320 | 0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa0477260 | Msa1077340 | 0.818906 | 1.534535e-52 | -8.615850e-47 |
| Msa0477260 | Msa1081790 | -0.817066 | 3.997531e-52 | -8.615850e-47 |
| Msa0477260 | Msa1082500 | 0.800073 | 1.709714e-48 | -8.615850e-47 |
| Msa0477260 | Msa1085920 | 0.827619 | 1.415253e-54 | -8.615850e-47 |
| Msa0477260 | Msa1087990 | 0.810294 | 1.238338e-50 | -8.615850e-47 |
| Msa0477260 | Msa1090260 | 0.830743 | 2.472743e-55 | -8.615850e-47 |
| Msa0477260 | Msa1092090 | 0.826482 | 2.648225e-54 | -8.615850e-47 |
| Msa0477260 | Msa1094280 | 0.820896 | 5.382776e-53 | -8.615850e-47 |
| Msa0477260 | Msa1107260 | 0.805458 | 1.322343e-49 | -8.615850e-47 |
| Msa0477260 | Msa1109820 | 0.800676 | 1.288979e-48 | -8.615850e-47 |
| Msa0477260 | Msa1115280 | 0.824139 | 9.491838e-54 | -8.615850e-47 |
| Msa0477260 | Msa1116690 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0477260 | Msa1143930 | -0.803206 | 3.893653e-49 | -8.615850e-47 |
| Msa0477260 | Msa1150710 | 0.868935 | 4.511148e-66 | -8.615850e-47 |
| Msa0477260 | Msa1151710 | 0.806213 | 9.175389e-50 | -8.615850e-47 |
| Msa0477260 | Msa1156170 | -0.800478 | 1.414355e-48 | -8.615850e-47 |
| Msa0477260 | Msa1158670 | 0.811216 | 7.822674e-51 | -8.615850e-47 |
| Msa0477260 | Msa1163590 | -0.812044 | 5.168555e-51 | -8.615850e-47 |
| Msa0477260 | Msa1164020 | 0.800977 | 1.118898e-48 | -8.615850e-47 |
| Msa0477260 | Msa1166090 | -0.803989 | 2.678302e-49 | -8.615850e-47 |
| Msa0477260 | Msa1171800 | 0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa0477260 | Msa1171870 | 0.801345 | 9.408611e-49 | -8.615850e-47 |
| Msa0477260 | Msa1172230 | 0.802282 | 6.041202e-49 | -8.615850e-47 |
| Msa0477260 | Msa1174040 | 0.815303 | 9.905435e-52 | -8.615850e-47 |
| Msa0477260 | Msa1174310 | 0.843671 | 1.213899e-58 | -8.615850e-47 |
| Msa0477260 | Msa1177780 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa0477260 | Msa1202660 | 0.801816 | 7.533234e-49 | -8.615850e-47 |
| Msa0477260 | Msa1206100 | 0.825901 | 3.639467e-54 | -8.615850e-47 |
| Msa0477260 | Msa1207350 | 0.816483 | 5.403685e-52 | -8.615850e-47 |
| Msa0477260 | Msa1208380 | 0.843500 | 1.348868e-58 | -8.615850e-47 |
| Msa0477260 | Msa1217430 | -0.826977 | 2.017155e-54 | -8.615850e-47 |
| Msa0477260 | Msa1217830 | 0.806537 | 7.838373e-50 | -8.615850e-47 |
| Msa0477260 | Msa1224810 | 0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0477260 | Msa1233500 | 0.821660 | 3.588753e-53 | -8.615850e-47 |
| Msa0477260 | Msa1235400 | 0.835745 | 1.402838e-56 | -8.615850e-47 |
| Msa0477260 | Msa1237980 | 0.800700 | 1.274541e-48 | -8.615850e-47 |
| Msa0477260 | Msa1240180 | 0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0477260 | Msa1240210 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0477260 | Msa1258380 | -0.823202 | 1.572180e-53 | -8.615850e-47 |
| Msa0477260 | Msa1267260 | 0.823618 | 1.257054e-53 | -8.615850e-47 |
| Msa0477260 | Msa1270660 | 0.832740 | 7.956758e-56 | -8.615850e-47 |
| Msa0477260 | Msa1270730 | 0.840895 | 6.601164e-58 | -8.615850e-47 |
| Msa0477260 | Msa1276340 | 0.801801 | 7.584104e-49 | -8.615850e-47 |
| Msa0477260 | Msa1276440 | 0.851991 | 6.187279e-61 | -8.615850e-47 |
| Msa0477260 | Msa1276510 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa0477260 | Msa1287680 | 0.828068 | 1.103919e-54 | -8.615850e-47 |
| Msa0477260 | Msa1295330 | 0.823488 | 1.348042e-53 | -8.615850e-47 |
| Msa0477260 | Msa1300350 | -0.825822 | 3.800803e-54 | -8.615850e-47 |
| Msa0477260 | Msa1302190 | -0.815418 | 9.340855e-52 | -8.615850e-47 |
| Msa0477260 | Msa1306430 | 0.806550 | 7.791605e-50 | -8.615850e-47 |
| Msa0477260 | Msa1306750 | 0.847744 | 9.525426e-60 | -8.615850e-47 |
| Msa0477260 | Msa1307740 | 0.872228 | 3.736316e-67 | -8.615850e-47 |
| Msa0477260 | Msa1314770 | 0.857126 | 2.018267e-62 | -8.615850e-47 |
| Msa0477260 | Msa1328520 | 0.802216 | 6.232402e-49 | -8.615850e-47 |
| Msa0477260 | Msa1329550 | 0.827070 | 1.916228e-54 | -8.615850e-47 |
| Msa0477260 | Msa1333420 | 0.809271 | 2.054864e-50 | -8.615850e-47 |
| Msa0477260 | Msa1335230 | 0.823153 | 1.614475e-53 | -8.615850e-47 |
| Msa0477260 | Msa1339190 | 0.820575 | 6.378910e-53 | -8.615850e-47 |
| Msa0477260 | Msa1344660 | 0.822658 | 2.105203e-53 | -8.615850e-47 |
| Msa0477260 | Msa1348600 | 0.967971 | 5.113059e-128 | -8.615850e-47 |
| Msa0477260 | Msa1348850 | 0.825816 | 3.812799e-54 | -8.615850e-47 |
| Msa0477260 | Msa1355890 | 0.803213 | 3.880114e-49 | -8.615850e-47 |
| Msa0477260 | Msa1369530 | 0.801628 | 8.233012e-49 | -8.615850e-47 |
| Msa0477260 | Msa1371090 | 0.803108 | 4.080215e-49 | -8.615850e-47 |
| Msa0477260 | Msa1372580 | 0.806877 | 6.643610e-50 | -8.615850e-47 |
| Msa0477260 | Msa1376160 | -0.812477 | 4.157264e-51 | -8.615850e-47 |
| Msa0477260 | Msa1377080 | 0.827871 | 1.231133e-54 | -8.615850e-47 |
| Msa0477260 | Msa1388860 | 0.806501 | 7.978690e-50 | -8.615850e-47 |
| Msa0477260 | Msa1393740 | 0.822821 | 1.929648e-53 | -8.615850e-47 |
| Msa0477260 | Msa1396400 | -0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0477260 | Msa1396940 | 0.800296 | 1.540741e-48 | -8.615850e-47 |
| Msa0477260 | Msa1397120 | 0.829507 | 4.952852e-55 | -8.615850e-47 |
| Msa0477260 | Msa1403340 | 0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0477260 | Msa1403890 | 0.824420 | 8.150929e-54 | -8.615850e-47 |
| Msa0477260 | Msa1404550 | 0.818903 | 1.537572e-52 | -8.615850e-47 |
| Msa0477260 | Msa1407600 | 0.813032 | 3.142174e-51 | -8.615850e-47 |
| Msa0477260 | Msa1420270 | 0.803805 | 2.925495e-49 | -8.615850e-47 |
| Msa0477260 | Msa1423820 | 0.811681 | 6.199062e-51 | -8.615850e-47 |
| Msa0477260 | Msa1427230 | 0.808366 | 3.209312e-50 | -8.615850e-47 |
| Msa0477260 | Msa1437130 | 0.801646 | 8.163419e-49 | -8.615850e-47 |
| Msa0477260 | Msa1438700 | 0.824142 | 9.471814e-54 | -8.615850e-47 |
| Msa0477260 | Msa1438840 | 0.829667 | 4.527537e-55 | -8.615850e-47 |
| Msa0477260 | Msa1444250 | -0.830624 | 2.643870e-55 | -8.615850e-47 |
| Msa0477260 | Msa1444740 | 0.854989 | 8.524032e-62 | -8.615850e-47 |
| Msa0477260 | Msa1448630 | 0.870568 | 1.322539e-66 | -8.615850e-47 |
| Msa0477260 | Msa1451620 | -0.805807 | 1.116937e-49 | -8.615850e-47 |
| Msa0477260 | Msa1460800 | 0.810018 | 1.419857e-50 | -8.615850e-47 |
| Msa0477260 | Msa1460830 | 0.803956 | 2.721164e-49 | -8.615850e-47 |
| Msa0477260 | Msa1462060 | 0.809224 | 2.102898e-50 | -8.615850e-47 |
| Msa0477260 | Msa1462290 | 0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0477260 | Msa1462840 | 0.800182 | 1.624711e-48 | -8.615850e-47 |
| Msa0477260 | Msa1466730 | 0.819128 | 1.366509e-52 | -8.615850e-47 |
| Msa0256330 | Msa0477260 | 0.836436 | 9.368779e-57 | -8.615850e-47 |
| Msa0257500 | Msa0477260 | 0.822366 | 2.461540e-53 | -8.615850e-47 |
| Msa0260210 | Msa0477260 | 0.804604 | 1.994592e-49 | -8.615850e-47 |
| Msa0261720 | Msa0477260 | 0.819536 | 1.102953e-52 | -8.615850e-47 |
| Msa0265150 | Msa0477260 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
| Msa0269450 | Msa0477260 | 0.817420 | 3.327983e-52 | -8.615850e-47 |
| Msa0271360 | Msa0477260 | 0.811813 | 5.803973e-51 | -8.615850e-47 |
| Msa0271580 | Msa0477260 | 0.814197 | 1.741626e-51 | -8.615850e-47 |
| Msa0271650 | Msa0477260 | 0.800368 | 1.489118e-48 | -8.615850e-47 |
| Msa0284820 | Msa0477260 | 0.803987 | 2.681533e-49 | -8.615850e-47 |
| Msa0287410 | Msa0477260 | 0.812399 | 4.323276e-51 | -8.615850e-47 |
| Msa0295330 | Msa0477260 | 0.830263 | 3.240262e-55 | -8.615850e-47 |
| Msa0299580 | Msa0477260 | 0.839399 | 1.622034e-57 | -8.615850e-47 |
| Msa0304290 | Msa0477260 | 0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0304330 | Msa0477260 | 0.803933 | 2.751949e-49 | -8.615850e-47 |
| Msa0305890 | Msa0477260 | 0.808335 | 3.258440e-50 | -8.615850e-47 |
| Msa0307470 | Msa0477260 | 0.829447 | 5.120695e-55 | -8.615850e-47 |
| Msa0315290 | Msa0477260 | 0.804756 | 1.853721e-49 | -8.615850e-47 |
| Msa0319170 | Msa0477260 | 0.832804 | 7.668486e-56 | -8.615850e-47 |
| Msa0326110 | Msa0477260 | 0.829606 | 4.686779e-55 | -8.615850e-47 |
| Msa0337060 | Msa0477260 | 0.831866 | 1.309206e-55 | -8.615850e-47 |
| Msa0340810 | Msa0477260 | 0.807913 | 4.007418e-50 | -8.615850e-47 |
| Msa0344830 | Msa0477260 | 0.805742 | 1.152611e-49 | -8.615850e-47 |
| Msa0347610 | Msa0477260 | 0.866116 | 3.606968e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477260 | MtrunA17_Chr3g0139141 | 96.947 | 393 | 10 | 2 | 1 | 392 | 1 | 392 | 0.0 | 782 |
| Msa0477260 | MtrunA17_Chr8g0365761 | 40.000 | 365 | 217 | 2 | 20 | 382 | 175 | 539 | 2.78e-97 | 301 |
| Msa0477260 | MtrunA17_Chr8g0365761 | 36.778 | 329 | 202 | 6 | 14 | 338 | 9 | 335 | 3.66e-64 | 214 |
| Msa0477260 | MtrunA17_Chr3g0143311 | 36.935 | 398 | 231 | 7 | 12 | 389 | 32 | 429 | 4.63e-82 | 257 |
| Msa0477260 | MtrunA17_Chr8g0365791 | 38.141 | 312 | 191 | 2 | 27 | 336 | 182 | 493 | 1.92e-74 | 240 |
| Msa0477260 | MtrunA17_Chr8g0365791 | 33.245 | 376 | 238 | 8 | 14 | 384 | 9 | 376 | 4.63e-63 | 210 |
| Msa0477260 | MtrunA17_Chr8g0365791 | 37.821 | 156 | 94 | 3 | 20 | 172 | 335 | 490 | 4.70e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477260 | AT4G31240.1 | 59.309 | 376 | 152 | 1 | 11 | 385 | 11 | 386 | 6.83e-170 | 480 |
| Msa0477260 | AT4G31240.2 | 59.309 | 376 | 152 | 1 | 11 | 385 | 11 | 386 | 6.83e-170 | 480 |
| Msa0477260 | AT1G60420.1 | 37.158 | 366 | 226 | 4 | 20 | 382 | 179 | 543 | 5.61e-92 | 288 |
| Msa0477260 | AT1G60420.1 | 36.975 | 357 | 214 | 7 | 13 | 362 | 12 | 364 | 2.23e-66 | 221 |
| Msa0477260 | AT1G60420.1 | 36.875 | 160 | 97 | 3 | 7 | 164 | 328 | 485 | 1.32e-25 | 108 |
Find 96 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGACATTGAATTCTTTA+AGG | 0.137026 | 3_3:+81420642 | None:intergenic |
| AGCATGTTTGTATACTTATT+TGG | 0.188550 | 3_3:-81419969 | Msa0477260:three_prime_UTR |
| GGACGCAACTTTCTCATTTC+AGG | 0.197560 | 3_3:-81421041 | Msa0477260:CDS |
| CTTATCCTCGATTCAGTAAA+TGG | 0.202499 | 3_3:+81420449 | None:intergenic |
| GCATGAACATGTACTTAAAT+TGG | 0.232241 | 3_3:-81420363 | Msa0477260:CDS |
| TTTATGATGATCACGTAATA+TGG | 0.267560 | 3_3:+81422106 | None:intergenic |
| TGCCTTGTTCTGTCTTCATA+TGG | 0.269042 | 3_3:+81420593 | None:intergenic |
| AAAACGCGAAGAAGTAAATT+TGG | 0.274011 | 3_3:-81421084 | Msa0477260:CDS |
| CCTTCCCTTCACAAGATAAA+AGG | 0.288638 | 3_3:+81421701 | None:intergenic |
| AAGCCTCTCCTTCCTTTCTC+AGG | 0.320765 | 3_3:+81420411 | None:intergenic |
| TATCATTTAATGAAAAGTTT+AGG | 0.327025 | 3_3:-81420030 | Msa0477260:three_prime_UTR |
| GAAGACTGATTGATAGATAT+CGG | 0.330938 | 3_3:-81421250 | Msa0477260:CDS |
| GTAAGAAACAAGGCAAGTTC+TGG | 0.355815 | 3_3:-81420310 | Msa0477260:CDS |
| ATTGAGTGGATTGAGGATTA+TGG | 0.369357 | 3_3:-81421164 | Msa0477260:CDS |
| ACATGTACTTAAATTGGATA+TGG | 0.376466 | 3_3:-81420357 | Msa0477260:CDS |
| TCCCTTCCTTTAGAAGTGTA+TGG | 0.376495 | 3_3:-81420003 | Msa0477260:three_prime_UTR |
| GGAAAAGTCATTAGTTTGAA+TGG | 0.389791 | 3_3:-81420509 | Msa0477260:CDS |
| AGGAGAGGCTTTGCCTCAAC+AGG | 0.399694 | 3_3:-81420399 | Msa0477260:CDS |
| AAACTTACCCTTCAAATAGT+AGG | 0.402552 | 3_3:+81420087 | None:intergenic |
| CTTATATTCATGAGCTACTT+TGG | 0.411333 | 3_3:-81420181 | Msa0477260:three_prime_UTR |
| GGCTTTAACAACTTAATGAT+AGG | 0.435311 | 3_3:+81420108 | None:intergenic |
| AACTAGCCGGGAAAACTGTT+GGG | 0.444358 | 3_3:-81420793 | Msa0477260:CDS |
| ATGAGCTACTTTGGTAGTGA+TGG | 0.446519 | 3_3:-81420172 | Msa0477260:three_prime_UTR |
| GCCTTGTTCTGTCTTCATAT+GGG | 0.446620 | 3_3:+81420594 | None:intergenic |
| TGTTAAAGCCTACTATTTGA+AGG | 0.450574 | 3_3:-81420095 | Msa0477260:three_prime_UTR |
| TGAGCTACTTTGGTAGTGAT+GGG | 0.455339 | 3_3:-81420171 | Msa0477260:three_prime_UTR |
| AAAGAGAGGGATAAATATAG+AGG | 0.460671 | 3_3:-81421369 | Msa0477260:CDS |
| AGAATCACATACATATGCTT+TGG | 0.462446 | 3_3:+81420334 | None:intergenic |
| TATATCCCATACACTTCTAA+AGG | 0.474795 | 3_3:+81419997 | None:intergenic |
| GGCTTTGCCTCAACAGGTTG+AGG | 0.481541 | 3_3:-81420393 | Msa0477260:CDS |
| GAACTAGCCGGGAAAACTGT+TGG | 0.484272 | 3_3:-81420794 | Msa0477260:CDS |
| TACCCTTGTCTGATTGCAAT+GGG | 0.484415 | 3_3:-81421481 | Msa0477260:CDS |
| TTTAGAAGCGGCCCTGAGAA+AGG | 0.496110 | 3_3:-81420423 | Msa0477260:CDS |
| TCATGTCTCTTCCTTGTGAA+AGG | 0.497231 | 3_3:+81421131 | None:intergenic |
| AAAAGCTTCTGCTCCGTATG+AGG | 0.498346 | 3_3:+81420472 | None:intergenic |
| CCCTTCCTTTAGAAGTGTAT+GGG | 0.501598 | 3_3:-81420002 | Msa0477260:three_prime_UTR |
| AAACATGATTGAGTGGATTG+AGG | 0.505573 | 3_3:-81421171 | Msa0477260:CDS |
| TTGACCTTCTCAAGACAACT+AGG | 0.509346 | 3_3:+81420251 | None:intergenic |
| GGTCCAATGAAAACCAAAGC+TGG | 0.509568 | 3_3:+81420536 | None:intergenic |
| AGCCTCTCCTTCCTTTCTCA+GGG | 0.514000 | 3_3:+81420412 | None:intergenic |
| TTATGATGATCACGTAATAT+GGG | 0.521041 | 3_3:+81422107 | None:intergenic |
| AACAATCTGAAGGATACAAA+AGG | 0.521437 | 3_3:-81420704 | Msa0477260:CDS |
| TCCTTTGACCATGACGAGGA+TGG | 0.524599 | 3_3:-81421335 | Msa0477260:CDS |
| GTTAAAGCCTACTATTTGAA+GGG | 0.527887 | 3_3:-81420094 | Msa0477260:three_prime_UTR |
| CATTTCAGGAGATGATAGAA+AGG | 0.533685 | 3_3:-81421027 | Msa0477260:intron |
| TCTTTATTCACATGTCACAT+AGG | 0.533693 | 3_3:-81422073 | Msa0477260:intron |
| AAGTAGCTCATGAATATAAG+TGG | 0.533999 | 3_3:+81420184 | None:intergenic |
| AAGACTGATTGATAGATATC+GGG | 0.537244 | 3_3:-81421249 | Msa0477260:CDS |
| GTGCTTGTATCTGAACTAGC+CGG | 0.540763 | 3_3:-81420806 | Msa0477260:CDS |
| TCCCATACACTTCTAAAGGA+AGG | 0.544175 | 3_3:+81420001 | None:intergenic |
| TGACAGCTTTGATGTTCTGA+AGG | 0.544346 | 3_3:-81421749 | Msa0477260:CDS |
| ATTCTATTCTCTACCAACAT+TGG | 0.544674 | 3_3:+81420222 | None:intergenic |
| GAACATGATGGAATGAATGA+TGG | 0.546932 | 3_3:+81421215 | None:intergenic |
| TCATCCTAGTTGTCTTGAGA+AGG | 0.553361 | 3_3:-81420255 | Msa0477260:CDS |
| TCCATCCTCGTCATGGTCAA+AGG | 0.558794 | 3_3:+81421334 | None:intergenic |
| TGCTTGTATCTGAACTAGCC+GGG | 0.560596 | 3_3:-81420805 | Msa0477260:CDS |
| CTTTAAATCCATCCTCGTCA+TGG | 0.563074 | 3_3:+81421327 | None:intergenic |
| TCAACAGAACTAGCATGCCT+TGG | 0.565333 | 3_3:-81420625 | Msa0477260:CDS |
| CCCATACACTTCTAAAGGAA+GGG | 0.567275 | 3_3:+81420002 | None:intergenic |
| TTTCTGAGGCTCTTATGGCA+GGG | 0.573123 | 3_3:-81421798 | Msa0477260:exon |
| GCAGAAGCATCTTCTTACAC+AGG | 0.573380 | 3_3:-81422138 | Msa0477260:five_prime_UTR |
| TTTCCCATTGCAATCAGACA+AGG | 0.573755 | 3_3:+81421478 | None:intergenic |
| GTACCCTTGTCTGATTGCAA+TGG | 0.575133 | 3_3:-81421482 | Msa0477260:CDS |
| CAGTTCATGATCTCCTCATA+CGG | 0.577540 | 3_3:-81420485 | Msa0477260:CDS |
| GAAGCGGCCCTGAGAAAGGA+AGG | 0.578716 | 3_3:-81420419 | Msa0477260:CDS |
| GTTAAGGCATCAGAACATGA+TGG | 0.579146 | 3_3:+81421203 | None:intergenic |
| GAGGCTTCTAGGCAACACTT+TGG | 0.579695 | 3_3:-81422160 | None:intergenic |
| TATGAAACACTGAGAAAGAG+AGG | 0.589929 | 3_3:-81421383 | Msa0477260:CDS |
| AGGTCAACAATGACCAATGT+TGG | 0.598627 | 3_3:-81420235 | Msa0477260:CDS |
| TTGATATCCTCAACCTGTTG+AGG | 0.598633 | 3_3:+81420386 | None:intergenic |
| GTATGCATCTGCAAGTTGAA+TGG | 0.602371 | 3_3:+81420727 | None:intergenic |
| TCATAAAGATCAACAAGATG+AGG | 0.609670 | 3_3:+81421401 | None:intergenic |
| CATCTCCTTTGACCATGACG+AGG | 0.615057 | 3_3:-81421339 | Msa0477260:CDS |
| ATGACAAGGAGGAGACCAGT+AGG | 0.615127 | 3_3:+81420757 | None:intergenic |
| TCCCATATGAAGACAGAACA+AGG | 0.616146 | 3_3:-81420595 | Msa0477260:CDS |
| TTGGATGAATTATTGACACA+TGG | 0.617894 | 3_3:-81421065 | Msa0477260:CDS |
| TGAGGAATGAAAAGTCTGCA+AGG | 0.618484 | 3_3:+81421419 | None:intergenic |
| ATCTGCAAGTTGAATGGTGA+AGG | 0.619741 | 3_3:+81420733 | None:intergenic |
| ATGAAACACTGAGAAAGAGA+GGG | 0.621375 | 3_3:-81421382 | Msa0477260:CDS |
| GTGATGCATTTCCTTTCACA+AGG | 0.625020 | 3_3:-81421142 | Msa0477260:CDS |
| GGCCCTGAGAAAGGAAGGAG+AGG | 0.626905 | 3_3:-81420414 | Msa0477260:CDS |
| TCTGCAAGGTCTACACCAGT+TGG | 0.627906 | 3_3:+81421433 | None:intergenic |
| CTAAAACAATCTCAAAGCAG+TGG | 0.631342 | 3_3:+81420681 | None:intergenic |
| TGAATGGTGAAGGCATGACA+AGG | 0.638241 | 3_3:+81420743 | None:intergenic |
| GATGAATTATTGACACATGG+AGG | 0.644306 | 3_3:-81421062 | Msa0477260:CDS |
| AACACATCAAGAGTATGCCA+TGG | 0.646429 | 3_3:-81421304 | Msa0477260:CDS |
| TTCCCATTGCAATCAGACAA+GGG | 0.647330 | 3_3:+81421479 | None:intergenic |
| TGTGATTCTTGTAAGAAACA+AGG | 0.649097 | 3_3:-81420320 | Msa0477260:CDS |
| AGATGCATACAACAATCTGA+AGG | 0.652915 | 3_3:-81420714 | Msa0477260:CDS |
| TGATGATCACGTAATATGGG+AGG | 0.656993 | 3_3:+81422110 | None:intergenic |
| TTTCACAAGGAAGAGACATG+AGG | 0.657371 | 3_3:-81421129 | Msa0477260:CDS |
| TCAAATGGGACAGCTAGCCA+TGG | 0.661099 | 3_3:+81421287 | None:intergenic |
| TCATATGGGATAGCAAGCCA+AGG | 0.668435 | 3_3:+81420608 | None:intergenic |
| TTATATCAAAGATTCTACAG+AGG | 0.694670 | 3_3:+81420567 | None:intergenic |
| ATGGTGAAGGCATGACAAGG+AGG | 0.703664 | 3_3:+81420746 | None:intergenic |
| GAGGATAAGAGATTTAGAAG+CGG | 0.713748 | 3_3:-81420435 | Msa0477260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATTTAATGAAAAGTTT+AGG | - | chr3_3:81422069-81422088 | Msa0477260:intron | 15.0% |
| !! | TATCATTTAATGAAAAGTTT+AGG | - | chr3_3:81422069-81422088 | Msa0477260:intron | 15.0% |
| !!! | TTTTGAAACCTAAATAATCA+AGG | + | chr3_3:81420253-81420272 | None:intergenic | 20.0% |
| !! | AAACATTACTAAGCAAATTA+TGG | + | chr3_3:81420573-81420592 | None:intergenic | 20.0% |
| !!! | TATTCAATTTTGCATCAAAT+GGG | + | chr3_3:81420829-81420848 | None:intergenic | 20.0% |
| !! | TATAAAAAAAATTCCAGCTT+TGG | - | chr3_3:81421550-81421569 | Msa0477260:intron | 20.0% |
| !!! | TTTTGAAACCTAAATAATCA+AGG | + | chr3_3:81420253-81420272 | None:intergenic | 20.0% |
| !! | AAACATTACTAAGCAAATTA+TGG | + | chr3_3:81420573-81420592 | None:intergenic | 20.0% |
| !!! | TATTCAATTTTGCATCAAAT+GGG | + | chr3_3:81420829-81420848 | None:intergenic | 20.0% |
| !! | TATAAAAAAAATTCCAGCTT+TGG | - | chr3_3:81421550-81421569 | Msa0477260:intron | 20.0% |
| ! | TTATGATGATCACGTAATAT+GGG | + | chr3_3:81419995-81420014 | None:intergenic | 25.0% |
| ! | TTTATGATGATCACGTAATA+TGG | + | chr3_3:81419996-81420015 | None:intergenic | 25.0% |
| ! | TTGCTTATCCTTGATTATTT+AGG | - | chr3_3:81420242-81420261 | Msa0477260:CDS | 25.0% |
| !! | ATTTCCTTTTATCTTGTGAA+GGG | - | chr3_3:81420394-81420413 | Msa0477260:CDS | 25.0% |
| !! | CTATTCAATTTTGCATCAAA+TGG | + | chr3_3:81420830-81420849 | None:intergenic | 25.0% |
| ! | GTAAACAAAAACTTCAAGTA+GGG | + | chr3_3:81421108-81421127 | None:intergenic | 25.0% |
| ! | AGTAAACAAAAACTTCAAGT+AGG | + | chr3_3:81421109-81421128 | None:intergenic | 25.0% |
| !! | GTAATCACGATTTTAAATTG+TGG | - | chr3_3:81421137-81421156 | Msa0477260:CDS | 25.0% |
| !!! | TTGTTTTAGTTTCAACAGAT+AGG | - | chr3_3:81421432-81421451 | Msa0477260:CDS | 25.0% |
| !!! | TGTTTTAGTTTCAACAGATA+GGG | - | chr3_3:81421433-81421452 | Msa0477260:CDS | 25.0% |
| ! | TGTTGACATTGAATTCTTTA+AGG | + | chr3_3:81421460-81421479 | None:intergenic | 25.0% |
| ! | TTATATCAAAGATTCTACAG+AGG | + | chr3_3:81421535-81421554 | None:intergenic | 25.0% |
| ! | ACATGTACTTAAATTGGATA+TGG | - | chr3_3:81421742-81421761 | Msa0477260:CDS | 25.0% |
| ! | AGCATGTTTGTATACTTATT+TGG | - | chr3_3:81422130-81422149 | Msa0477260:five_prime_UTR | 25.0% |
| ! | TTATGATGATCACGTAATAT+GGG | + | chr3_3:81419995-81420014 | None:intergenic | 25.0% |
| ! | TTTATGATGATCACGTAATA+TGG | + | chr3_3:81419996-81420015 | None:intergenic | 25.0% |
| ! | TTGCTTATCCTTGATTATTT+AGG | - | chr3_3:81420242-81420261 | Msa0477260:CDS | 25.0% |
| !! | ATTTCCTTTTATCTTGTGAA+GGG | - | chr3_3:81420394-81420413 | Msa0477260:CDS | 25.0% |
| !! | CTATTCAATTTTGCATCAAA+TGG | + | chr3_3:81420830-81420849 | None:intergenic | 25.0% |
| ! | GTAAACAAAAACTTCAAGTA+GGG | + | chr3_3:81421108-81421127 | None:intergenic | 25.0% |
| ! | AGTAAACAAAAACTTCAAGT+AGG | + | chr3_3:81421109-81421128 | None:intergenic | 25.0% |
| !! | GTAATCACGATTTTAAATTG+TGG | - | chr3_3:81421137-81421156 | Msa0477260:CDS | 25.0% |
| !!! | TTGTTTTAGTTTCAACAGAT+AGG | - | chr3_3:81421432-81421451 | Msa0477260:CDS | 25.0% |
| !!! | TGTTTTAGTTTCAACAGATA+GGG | - | chr3_3:81421433-81421452 | Msa0477260:CDS | 25.0% |
| ! | TGTTGACATTGAATTCTTTA+AGG | + | chr3_3:81421460-81421479 | None:intergenic | 25.0% |
| ! | TTATATCAAAGATTCTACAG+AGG | + | chr3_3:81421535-81421554 | None:intergenic | 25.0% |
| ! | ACATGTACTTAAATTGGATA+TGG | - | chr3_3:81421742-81421761 | Msa0477260:CDS | 25.0% |
| ! | AGCATGTTTGTATACTTATT+TGG | - | chr3_3:81422130-81422149 | Msa0477260:five_prime_UTR | 25.0% |
| TCTTTATTCACATGTCACAT+AGG | - | chr3_3:81420026-81420045 | Msa0477260:three_prime_UTR | 30.0% | |
| !! | AAAAGTATTCAACAAGTGTG+AGG | - | chr3_3:81420150-81420169 | Msa0477260:three_prime_UTR | 30.0% |
| !! | GGGTTATGTTTTTATCGATA+AGG | - | chr3_3:81420178-81420197 | Msa0477260:three_prime_UTR | 30.0% |
| ! | GATTTCCTTTTATCTTGTGA+AGG | - | chr3_3:81420393-81420412 | Msa0477260:CDS | 30.0% |
| CTAATCTCATGATTCAAAGA+TGG | + | chr3_3:81420597-81420616 | None:intergenic | 30.0% | |
| CATCTTTGAATCATGAGATT+AGG | - | chr3_3:81420595-81420614 | Msa0477260:CDS | 30.0% | |
| TCATAAAGATCAACAAGATG+AGG | + | chr3_3:81420701-81420720 | None:intergenic | 30.0% | |
| AAAGAGAGGGATAAATATAG+AGG | - | chr3_3:81420730-81420749 | Msa0477260:CDS | 30.0% | |
| GAAGACTGATTGATAGATAT+CGG | - | chr3_3:81420849-81420868 | Msa0477260:intron | 30.0% | |
| AAGACTGATTGATAGATATC+GGG | - | chr3_3:81420850-81420869 | Msa0477260:intron | 30.0% | |
| !! | CATGTTTTTGTCAACAGTTA+AGG | + | chr3_3:81420915-81420934 | None:intergenic | 30.0% |
| TTGACAAAAACATGATTGAG+TGG | - | chr3_3:81420921-81420940 | Msa0477260:intron | 30.0% | |
| ! | TTCGCGTTTTCTTTTATCTA+TGG | + | chr3_3:81421005-81421024 | None:intergenic | 30.0% |
| AAAACGCGAAGAAGTAAATT+TGG | - | chr3_3:81421015-81421034 | Msa0477260:intron | 30.0% | |
| TTGGATGAATTATTGACACA+TGG | - | chr3_3:81421034-81421053 | Msa0477260:CDS | 30.0% | |
| ! | ACGATTTTAAATTGTGGTTG+CGG | - | chr3_3:81421143-81421162 | Msa0477260:CDS | 30.0% |
| !!! | AAAACTGTTGGGCTATTTTT+CGG | - | chr3_3:81421317-81421336 | Msa0477260:CDS | 30.0% |
| AACAATCTGAAGGATACAAA+AGG | - | chr3_3:81421395-81421414 | Msa0477260:CDS | 30.0% | |
| ! | AAACTAATGACTTTTCCATC+TGG | + | chr3_3:81421587-81421606 | None:intergenic | 30.0% |
| ! | GGAAAAGTCATTAGTTTGAA+TGG | - | chr3_3:81421590-81421609 | Msa0477260:intron | 30.0% |
| GCATGAACATGTACTTAAAT+TGG | - | chr3_3:81421736-81421755 | Msa0477260:CDS | 30.0% | |
| AGAATCACATACATATGCTT+TGG | + | chr3_3:81421768-81421787 | None:intergenic | 30.0% | |
| TGTGATTCTTGTAAGAAACA+AGG | - | chr3_3:81421779-81421798 | Msa0477260:CDS | 30.0% | |
| ATTCTATTCTCTACCAACAT+TGG | + | chr3_3:81421880-81421899 | None:intergenic | 30.0% | |
| AAGTAGCTCATGAATATAAG+TGG | + | chr3_3:81421918-81421937 | None:intergenic | 30.0% | |
| CTTATATTCATGAGCTACTT+TGG | - | chr3_3:81421918-81421937 | Msa0477260:intron | 30.0% | |
| ! | GGCTTTAACAACTTAATGAT+AGG | + | chr3_3:81421994-81422013 | None:intergenic | 30.0% |
| TGTTAAAGCCTACTATTTGA+AGG | - | chr3_3:81422004-81422023 | Msa0477260:intron | 30.0% | |
| GTTAAAGCCTACTATTTGAA+GGG | - | chr3_3:81422005-81422024 | Msa0477260:intron | 30.0% | |
| AAACTTACCCTTCAAATAGT+AGG | + | chr3_3:81422015-81422034 | None:intergenic | 30.0% | |
| ! | TTGAAGGGTAAGTTTTTGTA+AGG | - | chr3_3:81422020-81422039 | Msa0477260:intron | 30.0% |
| ! | TGAAGGGTAAGTTTTTGTAA+GGG | - | chr3_3:81422021-81422040 | Msa0477260:intron | 30.0% |
| TATATCCCATACACTTCTAA+AGG | + | chr3_3:81422105-81422124 | None:intergenic | 30.0% | |
| TCTTTATTCACATGTCACAT+AGG | - | chr3_3:81420026-81420045 | Msa0477260:three_prime_UTR | 30.0% | |
| !! | AAAAGTATTCAACAAGTGTG+AGG | - | chr3_3:81420150-81420169 | Msa0477260:three_prime_UTR | 30.0% |
| !! | GGGTTATGTTTTTATCGATA+AGG | - | chr3_3:81420178-81420197 | Msa0477260:three_prime_UTR | 30.0% |
| ! | GATTTCCTTTTATCTTGTGA+AGG | - | chr3_3:81420393-81420412 | Msa0477260:CDS | 30.0% |
| CTAATCTCATGATTCAAAGA+TGG | + | chr3_3:81420597-81420616 | None:intergenic | 30.0% | |
| CATCTTTGAATCATGAGATT+AGG | - | chr3_3:81420595-81420614 | Msa0477260:CDS | 30.0% | |
| TCATAAAGATCAACAAGATG+AGG | + | chr3_3:81420701-81420720 | None:intergenic | 30.0% | |
| AAAGAGAGGGATAAATATAG+AGG | - | chr3_3:81420730-81420749 | Msa0477260:CDS | 30.0% | |
| GAAGACTGATTGATAGATAT+CGG | - | chr3_3:81420849-81420868 | Msa0477260:intron | 30.0% | |
| AAGACTGATTGATAGATATC+GGG | - | chr3_3:81420850-81420869 | Msa0477260:intron | 30.0% | |
| !! | CATGTTTTTGTCAACAGTTA+AGG | + | chr3_3:81420915-81420934 | None:intergenic | 30.0% |
| TTGACAAAAACATGATTGAG+TGG | - | chr3_3:81420921-81420940 | Msa0477260:intron | 30.0% | |
| ! | TTCGCGTTTTCTTTTATCTA+TGG | + | chr3_3:81421005-81421024 | None:intergenic | 30.0% |
| AAAACGCGAAGAAGTAAATT+TGG | - | chr3_3:81421015-81421034 | Msa0477260:intron | 30.0% | |
| TTGGATGAATTATTGACACA+TGG | - | chr3_3:81421034-81421053 | Msa0477260:CDS | 30.0% | |
| ! | ACGATTTTAAATTGTGGTTG+CGG | - | chr3_3:81421143-81421162 | Msa0477260:CDS | 30.0% |
| !!! | AAAACTGTTGGGCTATTTTT+CGG | - | chr3_3:81421317-81421336 | Msa0477260:CDS | 30.0% |
| AACAATCTGAAGGATACAAA+AGG | - | chr3_3:81421395-81421414 | Msa0477260:CDS | 30.0% | |
| ! | AAACTAATGACTTTTCCATC+TGG | + | chr3_3:81421587-81421606 | None:intergenic | 30.0% |
| ! | GGAAAAGTCATTAGTTTGAA+TGG | - | chr3_3:81421590-81421609 | Msa0477260:intron | 30.0% |
| GCATGAACATGTACTTAAAT+TGG | - | chr3_3:81421736-81421755 | Msa0477260:CDS | 30.0% | |
| AGAATCACATACATATGCTT+TGG | + | chr3_3:81421768-81421787 | None:intergenic | 30.0% | |
| TGTGATTCTTGTAAGAAACA+AGG | - | chr3_3:81421779-81421798 | Msa0477260:CDS | 30.0% | |
| ATTCTATTCTCTACCAACAT+TGG | + | chr3_3:81421880-81421899 | None:intergenic | 30.0% | |
| AAGTAGCTCATGAATATAAG+TGG | + | chr3_3:81421918-81421937 | None:intergenic | 30.0% | |
| CTTATATTCATGAGCTACTT+TGG | - | chr3_3:81421918-81421937 | Msa0477260:intron | 30.0% | |
| ! | GGCTTTAACAACTTAATGAT+AGG | + | chr3_3:81421994-81422013 | None:intergenic | 30.0% |
| TGTTAAAGCCTACTATTTGA+AGG | - | chr3_3:81422004-81422023 | Msa0477260:intron | 30.0% | |
| GTTAAAGCCTACTATTTGAA+GGG | - | chr3_3:81422005-81422024 | Msa0477260:intron | 30.0% | |
| AAACTTACCCTTCAAATAGT+AGG | + | chr3_3:81422015-81422034 | None:intergenic | 30.0% | |
| ! | TTGAAGGGTAAGTTTTTGTA+AGG | - | chr3_3:81422020-81422039 | Msa0477260:intron | 30.0% |
| ! | TGAAGGGTAAGTTTTTGTAA+GGG | - | chr3_3:81422021-81422040 | Msa0477260:intron | 30.0% |
| TATATCCCATACACTTCTAA+AGG | + | chr3_3:81422105-81422124 | None:intergenic | 30.0% | |
| AATTAAGACACAATCCTGCA+AGG | + | chr3_3:81420057-81420076 | None:intergenic | 35.0% | |
| AGCAATTCAGATTCTTGCAA+GGG | + | chr3_3:81420103-81420122 | None:intergenic | 35.0% | |
| AAGCAATTCAGATTCTTGCA+AGG | + | chr3_3:81420104-81420123 | None:intergenic | 35.0% | |
| !! | TCTGAATTGCTTTTGTCTCT+AGG | - | chr3_3:81420112-81420131 | Msa0477260:three_prime_UTR | 35.0% |
| TATGAAACACTGAGAAAGAG+AGG | - | chr3_3:81420716-81420735 | Msa0477260:CDS | 35.0% | |
| ATGAAACACTGAGAAAGAGA+GGG | - | chr3_3:81420717-81420736 | Msa0477260:CDS | 35.0% | |
| ! | GAACATGATGGAATGAATGA+TGG | + | chr3_3:81420887-81420906 | None:intergenic | 35.0% |
| !! | AAACATGATTGAGTGGATTG+AGG | - | chr3_3:81420928-81420947 | Msa0477260:intron | 35.0% |
| !! | ATTGAGTGGATTGAGGATTA+TGG | - | chr3_3:81420935-81420954 | Msa0477260:intron | 35.0% |
| GATGAATTATTGACACATGG+AGG | - | chr3_3:81421037-81421056 | Msa0477260:CDS | 35.0% | |
| CATTTCAGGAGATGATAGAA+AGG | - | chr3_3:81421072-81421091 | Msa0477260:CDS | 35.0% | |
| GAATTCCATAAATGCACTCT+AGG | + | chr3_3:81421229-81421248 | None:intergenic | 35.0% | |
| AGATGCATACAACAATCTGA+AGG | - | chr3_3:81421385-81421404 | Msa0477260:CDS | 35.0% | |
| CTAAAACAATCTCAAAGCAG+TGG | + | chr3_3:81421421-81421440 | None:intergenic | 35.0% | |
| !!! | ATTCCAGCTTTGGTTTTCAT+TGG | - | chr3_3:81421560-81421579 | Msa0477260:intron | 35.0% |
| ! | CTTTTCCATTTACTGAATCG+AGG | - | chr3_3:81421645-81421664 | Msa0477260:intron | 35.0% |
| CTTATCCTCGATTCAGTAAA+TGG | + | chr3_3:81421653-81421672 | None:intergenic | 35.0% | |
| GAGGATAAGAGATTTAGAAG+CGG | - | chr3_3:81421664-81421683 | Msa0477260:intron | 35.0% | |
| AATTAAGACACAATCCTGCA+AGG | + | chr3_3:81420057-81420076 | None:intergenic | 35.0% | |
| AGCAATTCAGATTCTTGCAA+GGG | + | chr3_3:81420103-81420122 | None:intergenic | 35.0% | |
| AAGCAATTCAGATTCTTGCA+AGG | + | chr3_3:81420104-81420123 | None:intergenic | 35.0% | |
| !! | TCTGAATTGCTTTTGTCTCT+AGG | - | chr3_3:81420112-81420131 | Msa0477260:three_prime_UTR | 35.0% |
| TATGAAACACTGAGAAAGAG+AGG | - | chr3_3:81420716-81420735 | Msa0477260:CDS | 35.0% | |
| ATGAAACACTGAGAAAGAGA+GGG | - | chr3_3:81420717-81420736 | Msa0477260:CDS | 35.0% | |
| ! | GAACATGATGGAATGAATGA+TGG | + | chr3_3:81420887-81420906 | None:intergenic | 35.0% |
| !! | AAACATGATTGAGTGGATTG+AGG | - | chr3_3:81420928-81420947 | Msa0477260:intron | 35.0% |
| !! | ATTGAGTGGATTGAGGATTA+TGG | - | chr3_3:81420935-81420954 | Msa0477260:intron | 35.0% |
| GATGAATTATTGACACATGG+AGG | - | chr3_3:81421037-81421056 | Msa0477260:CDS | 35.0% | |
| CATTTCAGGAGATGATAGAA+AGG | - | chr3_3:81421072-81421091 | Msa0477260:CDS | 35.0% | |
| GAATTCCATAAATGCACTCT+AGG | + | chr3_3:81421229-81421248 | None:intergenic | 35.0% | |
| AGATGCATACAACAATCTGA+AGG | - | chr3_3:81421385-81421404 | Msa0477260:CDS | 35.0% | |
| CTAAAACAATCTCAAAGCAG+TGG | + | chr3_3:81421421-81421440 | None:intergenic | 35.0% | |
| !!! | ATTCCAGCTTTGGTTTTCAT+TGG | - | chr3_3:81421560-81421579 | Msa0477260:intron | 35.0% |
| ! | CTTTTCCATTTACTGAATCG+AGG | - | chr3_3:81421645-81421664 | Msa0477260:intron | 35.0% |
| CTTATCCTCGATTCAGTAAA+TGG | + | chr3_3:81421653-81421672 | None:intergenic | 35.0% | |
| GAGGATAAGAGATTTAGAAG+CGG | - | chr3_3:81421664-81421683 | Msa0477260:intron | 35.0% | |
| TGATGATCACGTAATATGGG+AGG | + | chr3_3:81419992-81420011 | None:intergenic | 40.0% | |
| ! | GTGAGTACATCTGTTTTCTG+AGG | - | chr3_3:81420287-81420306 | Msa0477260:CDS | 40.0% |
| !!! | TCTGTTTTCTGAGGCTCTTA+TGG | - | chr3_3:81420296-81420315 | Msa0477260:CDS | 40.0% |
| ! | TGACAGCTTTGATGTTCTGA+AGG | - | chr3_3:81420350-81420369 | Msa0477260:CDS | 40.0% |
| CCTTCCCTTCACAAGATAAA+AGG | + | chr3_3:81420401-81420420 | None:intergenic | 40.0% | |
| ! | CCTTTTATCTTGTGAAGGGA+AGG | - | chr3_3:81420398-81420417 | Msa0477260:CDS | 40.0% |
| !! | CAGATTTTAGTGTCGCAACA+GGG | + | chr3_3:81420533-81420552 | None:intergenic | 40.0% |
| TACCCTTGTCTGATTGCAAT+GGG | - | chr3_3:81420618-81420637 | Msa0477260:CDS | 40.0% | |
| TTCCCATTGCAATCAGACAA+GGG | + | chr3_3:81420623-81420642 | None:intergenic | 40.0% | |
| TTTCCCATTGCAATCAGACA+AGG | + | chr3_3:81420624-81420643 | None:intergenic | 40.0% | |
| !! | GTCTATTTTTCTCTGCCAAC+TGG | - | chr3_3:81420651-81420670 | Msa0477260:CDS | 40.0% |
| TGAGGAATGAAAAGTCTGCA+AGG | + | chr3_3:81420683-81420702 | None:intergenic | 40.0% | |
| CTTTAAATCCATCCTCGTCA+TGG | + | chr3_3:81420775-81420794 | None:intergenic | 40.0% | |
| ! | AACACATCAAGAGTATGCCA+TGG | - | chr3_3:81420795-81420814 | Msa0477260:CDS | 40.0% |
| ! | GTTAAGGCATCAGAACATGA+TGG | + | chr3_3:81420899-81420918 | None:intergenic | 40.0% |
| GTGATGCATTTCCTTTCACA+AGG | - | chr3_3:81420957-81420976 | Msa0477260:intron | 40.0% | |
| TCATGTCTCTTCCTTGTGAA+AGG | + | chr3_3:81420971-81420990 | None:intergenic | 40.0% | |
| TTTCACAAGGAAGAGACATG+AGG | - | chr3_3:81420970-81420989 | Msa0477260:intron | 40.0% | |
| ATTGTGGTTGCGGTCAAATA+TGG | - | chr3_3:81421153-81421172 | Msa0477260:CDS | 40.0% | |
| CAAGTCCTAGAGTGCATTTA+TGG | - | chr3_3:81421221-81421240 | Msa0477260:CDS | 40.0% | |
| ATGTTTCATCGTTGCATTGC+AGG | - | chr3_3:81421271-81421290 | Msa0477260:CDS | 40.0% | |
| ! | AAATAGCCCAACAGTTTTCC+CGG | + | chr3_3:81421315-81421334 | None:intergenic | 40.0% |
| ! | ATCTGCAAGTTGAATGGTGA+AGG | + | chr3_3:81421369-81421388 | None:intergenic | 40.0% |
| ! | GTATGCATCTGCAAGTTGAA+TGG | + | chr3_3:81421375-81421394 | None:intergenic | 40.0% |
| TCCCATATGAAGACAGAACA+AGG | - | chr3_3:81421504-81421523 | Msa0477260:intron | 40.0% | |
| ! | GCCTTGTTCTGTCTTCATAT+GGG | + | chr3_3:81421508-81421527 | None:intergenic | 40.0% |
| ! | TGCCTTGTTCTGTCTTCATA+TGG | + | chr3_3:81421509-81421528 | None:intergenic | 40.0% |
| !! | TTGGTTTTCATTGGACCAGA+TGG | - | chr3_3:81421569-81421588 | Msa0477260:intron | 40.0% |
| CAGTTCATGATCTCCTCATA+CGG | - | chr3_3:81421614-81421633 | Msa0477260:intron | 40.0% | |
| TTGATATCCTCAACCTGTTG+AGG | + | chr3_3:81421716-81421735 | None:intergenic | 40.0% | |
| GTAAGAAACAAGGCAAGTTC+TGG | - | chr3_3:81421789-81421808 | Msa0477260:exon | 40.0% | |
| TCATCCTAGTTGTCTTGAGA+AGG | - | chr3_3:81421844-81421863 | Msa0477260:intron | 40.0% | |
| TTGACCTTCTCAAGACAACT+AGG | + | chr3_3:81421851-81421870 | None:intergenic | 40.0% | |
| AGGTCAACAATGACCAATGT+TGG | - | chr3_3:81421864-81421883 | Msa0477260:intron | 40.0% | |
| !! | ATGAGCTACTTTGGTAGTGA+TGG | - | chr3_3:81421927-81421946 | Msa0477260:intron | 40.0% |
| !! | TGAGCTACTTTGGTAGTGAT+GGG | - | chr3_3:81421928-81421947 | Msa0477260:intron | 40.0% |
| ! | TCCCTTCCTTTAGAAGTGTA+TGG | - | chr3_3:81422096-81422115 | Msa0477260:five_prime_UTR | 40.0% |
| ! | CCCATACACTTCTAAAGGAA+GGG | + | chr3_3:81422100-81422119 | None:intergenic | 40.0% |
| ! | CCCTTCCTTTAGAAGTGTAT+GGG | - | chr3_3:81422097-81422116 | Msa0477260:five_prime_UTR | 40.0% |
| ! | TCCCATACACTTCTAAAGGA+AGG | + | chr3_3:81422101-81422120 | None:intergenic | 40.0% |
| TGATGATCACGTAATATGGG+AGG | + | chr3_3:81419992-81420011 | None:intergenic | 40.0% | |
| ! | GTGAGTACATCTGTTTTCTG+AGG | - | chr3_3:81420287-81420306 | Msa0477260:CDS | 40.0% |
| !!! | TCTGTTTTCTGAGGCTCTTA+TGG | - | chr3_3:81420296-81420315 | Msa0477260:CDS | 40.0% |
| ! | TGACAGCTTTGATGTTCTGA+AGG | - | chr3_3:81420350-81420369 | Msa0477260:CDS | 40.0% |
| CCTTCCCTTCACAAGATAAA+AGG | + | chr3_3:81420401-81420420 | None:intergenic | 40.0% | |
| ! | CCTTTTATCTTGTGAAGGGA+AGG | - | chr3_3:81420398-81420417 | Msa0477260:CDS | 40.0% |
| !! | CAGATTTTAGTGTCGCAACA+GGG | + | chr3_3:81420533-81420552 | None:intergenic | 40.0% |
| TACCCTTGTCTGATTGCAAT+GGG | - | chr3_3:81420618-81420637 | Msa0477260:CDS | 40.0% | |
| TTCCCATTGCAATCAGACAA+GGG | + | chr3_3:81420623-81420642 | None:intergenic | 40.0% | |
| TTTCCCATTGCAATCAGACA+AGG | + | chr3_3:81420624-81420643 | None:intergenic | 40.0% | |
| !! | GTCTATTTTTCTCTGCCAAC+TGG | - | chr3_3:81420651-81420670 | Msa0477260:CDS | 40.0% |
| TGAGGAATGAAAAGTCTGCA+AGG | + | chr3_3:81420683-81420702 | None:intergenic | 40.0% | |
| CTTTAAATCCATCCTCGTCA+TGG | + | chr3_3:81420775-81420794 | None:intergenic | 40.0% | |
| ! | AACACATCAAGAGTATGCCA+TGG | - | chr3_3:81420795-81420814 | Msa0477260:CDS | 40.0% |
| ! | GTTAAGGCATCAGAACATGA+TGG | + | chr3_3:81420899-81420918 | None:intergenic | 40.0% |
| GTGATGCATTTCCTTTCACA+AGG | - | chr3_3:81420957-81420976 | Msa0477260:intron | 40.0% | |
| TCATGTCTCTTCCTTGTGAA+AGG | + | chr3_3:81420971-81420990 | None:intergenic | 40.0% | |
| TTTCACAAGGAAGAGACATG+AGG | - | chr3_3:81420970-81420989 | Msa0477260:intron | 40.0% | |
| ATTGTGGTTGCGGTCAAATA+TGG | - | chr3_3:81421153-81421172 | Msa0477260:CDS | 40.0% | |
| CAAGTCCTAGAGTGCATTTA+TGG | - | chr3_3:81421221-81421240 | Msa0477260:CDS | 40.0% | |
| ATGTTTCATCGTTGCATTGC+AGG | - | chr3_3:81421271-81421290 | Msa0477260:CDS | 40.0% | |
| ! | AAATAGCCCAACAGTTTTCC+CGG | + | chr3_3:81421315-81421334 | None:intergenic | 40.0% |
| ! | ATCTGCAAGTTGAATGGTGA+AGG | + | chr3_3:81421369-81421388 | None:intergenic | 40.0% |
| ! | GTATGCATCTGCAAGTTGAA+TGG | + | chr3_3:81421375-81421394 | None:intergenic | 40.0% |
| TCCCATATGAAGACAGAACA+AGG | - | chr3_3:81421504-81421523 | Msa0477260:intron | 40.0% | |
| ! | GCCTTGTTCTGTCTTCATAT+GGG | + | chr3_3:81421508-81421527 | None:intergenic | 40.0% |
| ! | TGCCTTGTTCTGTCTTCATA+TGG | + | chr3_3:81421509-81421528 | None:intergenic | 40.0% |
| !! | TTGGTTTTCATTGGACCAGA+TGG | - | chr3_3:81421569-81421588 | Msa0477260:intron | 40.0% |
| CAGTTCATGATCTCCTCATA+CGG | - | chr3_3:81421614-81421633 | Msa0477260:intron | 40.0% | |
| TTGATATCCTCAACCTGTTG+AGG | + | chr3_3:81421716-81421735 | None:intergenic | 40.0% | |
| GTAAGAAACAAGGCAAGTTC+TGG | - | chr3_3:81421789-81421808 | Msa0477260:exon | 40.0% | |
| TCATCCTAGTTGTCTTGAGA+AGG | - | chr3_3:81421844-81421863 | Msa0477260:intron | 40.0% | |
| TTGACCTTCTCAAGACAACT+AGG | + | chr3_3:81421851-81421870 | None:intergenic | 40.0% | |
| AGGTCAACAATGACCAATGT+TGG | - | chr3_3:81421864-81421883 | Msa0477260:intron | 40.0% | |
| !! | ATGAGCTACTTTGGTAGTGA+TGG | - | chr3_3:81421927-81421946 | Msa0477260:intron | 40.0% |
| !! | TGAGCTACTTTGGTAGTGAT+GGG | - | chr3_3:81421928-81421947 | Msa0477260:intron | 40.0% |
| ! | TCCCTTCCTTTAGAAGTGTA+TGG | - | chr3_3:81422096-81422115 | Msa0477260:five_prime_UTR | 40.0% |
| ! | CCCATACACTTCTAAAGGAA+GGG | + | chr3_3:81422100-81422119 | None:intergenic | 40.0% |
| ! | CCCTTCCTTTAGAAGTGTAT+GGG | - | chr3_3:81422097-81422116 | Msa0477260:five_prime_UTR | 40.0% |
| ! | TCCCATACACTTCTAAAGGA+AGG | + | chr3_3:81422101-81422120 | None:intergenic | 40.0% |
| !! | GCAGAAGCATCTTCTTACAC+AGG | - | chr3_3:81419961-81419980 | Msa0477260:three_prime_UTR | 45.0% |
| TCACATAGGTACAACCTTGC+AGG | - | chr3_3:81420040-81420059 | Msa0477260:three_prime_UTR | 45.0% | |
| TTCAACAAGTGTGAGGTGTG+AGG | - | chr3_3:81420157-81420176 | Msa0477260:three_prime_UTR | 45.0% | |
| TCAACAAGTGTGAGGTGTGA+GGG | - | chr3_3:81420158-81420177 | Msa0477260:three_prime_UTR | 45.0% | |
| !!! | TTTTCTGAGGCTCTTATGGC+AGG | - | chr3_3:81420300-81420319 | Msa0477260:CDS | 45.0% |
| !! | TTTCTGAGGCTCTTATGGCA+GGG | - | chr3_3:81420301-81420320 | Msa0477260:CDS | 45.0% |
| ! | CTGAAGGTTTTTGCAGCTGA+AGG | - | chr3_3:81420366-81420385 | Msa0477260:CDS | 45.0% |
| !! | CCAGATTTTAGTGTCGCAAC+AGG | + | chr3_3:81420534-81420553 | None:intergenic | 45.0% |
| CCTGTTGCGACACTAAAATC+TGG | - | chr3_3:81420531-81420550 | Msa0477260:CDS | 45.0% | |
| GTACCCTTGTCTGATTGCAA+TGG | - | chr3_3:81420617-81420636 | Msa0477260:CDS | 45.0% | |
| GGACGCAACTTTCTCATTTC+AGG | - | chr3_3:81421058-81421077 | Msa0477260:CDS | 45.0% | |
| !! | CACTCTAGGACTTGACATCA+AGG | + | chr3_3:81421215-81421234 | None:intergenic | 45.0% |
| GTGCTTGTATCTGAACTAGC+CGG | - | chr3_3:81421293-81421312 | Msa0477260:CDS | 45.0% | |
| TGCTTGTATCTGAACTAGCC+GGG | - | chr3_3:81421294-81421313 | Msa0477260:CDS | 45.0% | |
| AACTAGCCGGGAAAACTGTT+GGG | - | chr3_3:81421306-81421325 | Msa0477260:CDS | 45.0% | |
| ! | TGAATGGTGAAGGCATGACA+AGG | + | chr3_3:81421359-81421378 | None:intergenic | 45.0% |
| TCAACAGAACTAGCATGCCT+TGG | - | chr3_3:81421474-81421493 | Msa0477260:CDS | 45.0% | |
| TCATATGGGATAGCAAGCCA+AGG | + | chr3_3:81421494-81421513 | None:intergenic | 45.0% | |
| GGTCCAATGAAAACCAAAGC+TGG | + | chr3_3:81421566-81421585 | None:intergenic | 45.0% | |
| AAAAGCTTCTGCTCCGTATG+AGG | + | chr3_3:81421630-81421649 | None:intergenic | 45.0% | |
| !! | GCAGAAGCATCTTCTTACAC+AGG | - | chr3_3:81419961-81419980 | Msa0477260:three_prime_UTR | 45.0% |
| TCACATAGGTACAACCTTGC+AGG | - | chr3_3:81420040-81420059 | Msa0477260:three_prime_UTR | 45.0% | |
| TTCAACAAGTGTGAGGTGTG+AGG | - | chr3_3:81420157-81420176 | Msa0477260:three_prime_UTR | 45.0% | |
| TCAACAAGTGTGAGGTGTGA+GGG | - | chr3_3:81420158-81420177 | Msa0477260:three_prime_UTR | 45.0% | |
| !!! | TTTTCTGAGGCTCTTATGGC+AGG | - | chr3_3:81420300-81420319 | Msa0477260:CDS | 45.0% |
| !! | TTTCTGAGGCTCTTATGGCA+GGG | - | chr3_3:81420301-81420320 | Msa0477260:CDS | 45.0% |
| ! | CTGAAGGTTTTTGCAGCTGA+AGG | - | chr3_3:81420366-81420385 | Msa0477260:CDS | 45.0% |
| !! | CCAGATTTTAGTGTCGCAAC+AGG | + | chr3_3:81420534-81420553 | None:intergenic | 45.0% |
| CCTGTTGCGACACTAAAATC+TGG | - | chr3_3:81420531-81420550 | Msa0477260:CDS | 45.0% | |
| GTACCCTTGTCTGATTGCAA+TGG | - | chr3_3:81420617-81420636 | Msa0477260:CDS | 45.0% | |
| GGACGCAACTTTCTCATTTC+AGG | - | chr3_3:81421058-81421077 | Msa0477260:CDS | 45.0% | |
| !! | CACTCTAGGACTTGACATCA+AGG | + | chr3_3:81421215-81421234 | None:intergenic | 45.0% |
| GTGCTTGTATCTGAACTAGC+CGG | - | chr3_3:81421293-81421312 | Msa0477260:CDS | 45.0% | |
| TGCTTGTATCTGAACTAGCC+GGG | - | chr3_3:81421294-81421313 | Msa0477260:CDS | 45.0% | |
| AACTAGCCGGGAAAACTGTT+GGG | - | chr3_3:81421306-81421325 | Msa0477260:CDS | 45.0% | |
| ! | TGAATGGTGAAGGCATGACA+AGG | + | chr3_3:81421359-81421378 | None:intergenic | 45.0% |
| TCAACAGAACTAGCATGCCT+TGG | - | chr3_3:81421474-81421493 | Msa0477260:CDS | 45.0% | |
| TCATATGGGATAGCAAGCCA+AGG | + | chr3_3:81421494-81421513 | None:intergenic | 45.0% | |
| GGTCCAATGAAAACCAAAGC+TGG | + | chr3_3:81421566-81421585 | None:intergenic | 45.0% | |
| AAAAGCTTCTGCTCCGTATG+AGG | + | chr3_3:81421630-81421649 | None:intergenic | 45.0% | |
| TCTGCAAGGTCTACACCAGT+TGG | + | chr3_3:81420669-81420688 | None:intergenic | 50.0% | |
| CATCTCCTTTGACCATGACG+AGG | - | chr3_3:81420760-81420779 | Msa0477260:CDS | 50.0% | |
| TCCTTTGACCATGACGAGGA+TGG | - | chr3_3:81420764-81420783 | Msa0477260:CDS | 50.0% | |
| TCCATCCTCGTCATGGTCAA+AGG | + | chr3_3:81420768-81420787 | None:intergenic | 50.0% | |
| TCAAATGGGACAGCTAGCCA+TGG | + | chr3_3:81420815-81420834 | None:intergenic | 50.0% | |
| CGGTCAAATATGGCTGATGC+AGG | - | chr3_3:81421163-81421182 | Msa0477260:CDS | 50.0% | |
| GAACTAGCCGGGAAAACTGT+TGG | - | chr3_3:81421305-81421324 | Msa0477260:CDS | 50.0% | |
| !!! | GGCTATTTTTCGGTGCCTAC+TGG | - | chr3_3:81421327-81421346 | Msa0477260:CDS | 50.0% |
| ATGACAAGGAGGAGACCAGT+AGG | + | chr3_3:81421345-81421364 | None:intergenic | 50.0% | |
| ! | ATGGTGAAGGCATGACAAGG+AGG | + | chr3_3:81421356-81421375 | None:intergenic | 50.0% |
| TTTAGAAGCGGCCCTGAGAA+AGG | - | chr3_3:81421676-81421695 | Msa0477260:intron | 50.0% | |
| AGCCTCTCCTTCCTTTCTCA+GGG | + | chr3_3:81421690-81421709 | None:intergenic | 50.0% | |
| AAGCCTCTCCTTCCTTTCTC+AGG | + | chr3_3:81421691-81421710 | None:intergenic | 50.0% | |
| TCTGCAAGGTCTACACCAGT+TGG | + | chr3_3:81420669-81420688 | None:intergenic | 50.0% | |
| CATCTCCTTTGACCATGACG+AGG | - | chr3_3:81420760-81420779 | Msa0477260:CDS | 50.0% | |
| TCCTTTGACCATGACGAGGA+TGG | - | chr3_3:81420764-81420783 | Msa0477260:CDS | 50.0% | |
| TCCATCCTCGTCATGGTCAA+AGG | + | chr3_3:81420768-81420787 | None:intergenic | 50.0% | |
| TCAAATGGGACAGCTAGCCA+TGG | + | chr3_3:81420815-81420834 | None:intergenic | 50.0% | |
| CGGTCAAATATGGCTGATGC+AGG | - | chr3_3:81421163-81421182 | Msa0477260:CDS | 50.0% | |
| GAACTAGCCGGGAAAACTGT+TGG | - | chr3_3:81421305-81421324 | Msa0477260:CDS | 50.0% | |
| !!! | GGCTATTTTTCGGTGCCTAC+TGG | - | chr3_3:81421327-81421346 | Msa0477260:CDS | 50.0% |
| ATGACAAGGAGGAGACCAGT+AGG | + | chr3_3:81421345-81421364 | None:intergenic | 50.0% | |
| ! | ATGGTGAAGGCATGACAAGG+AGG | + | chr3_3:81421356-81421375 | None:intergenic | 50.0% |
| TTTAGAAGCGGCCCTGAGAA+AGG | - | chr3_3:81421676-81421695 | Msa0477260:intron | 50.0% | |
| AGCCTCTCCTTCCTTTCTCA+GGG | + | chr3_3:81421690-81421709 | None:intergenic | 50.0% | |
| AAGCCTCTCCTTCCTTTCTC+AGG | + | chr3_3:81421691-81421710 | None:intergenic | 50.0% | |
| ! | ATGCAGGCGTTGCTATTGCG+TGG | - | chr3_3:81421179-81421198 | Msa0477260:CDS | 55.0% |
| AGGAGAGGCTTTGCCTCAAC+AGG | - | chr3_3:81421700-81421719 | Msa0477260:intron | 55.0% | |
| GGCTTTGCCTCAACAGGTTG+AGG | - | chr3_3:81421706-81421725 | Msa0477260:CDS | 55.0% | |
| ! | ATGCAGGCGTTGCTATTGCG+TGG | - | chr3_3:81421179-81421198 | Msa0477260:CDS | 55.0% |
| AGGAGAGGCTTTGCCTCAAC+AGG | - | chr3_3:81421700-81421719 | Msa0477260:intron | 55.0% | |
| GGCTTTGCCTCAACAGGTTG+AGG | - | chr3_3:81421706-81421725 | Msa0477260:CDS | 55.0% | |
| GAAGCGGCCCTGAGAAAGGA+AGG | - | chr3_3:81421680-81421699 | Msa0477260:intron | 60.0% | |
| GGCCCTGAGAAAGGAAGGAG+AGG | - | chr3_3:81421685-81421704 | Msa0477260:intron | 60.0% | |
| GAAGCGGCCCTGAGAAAGGA+AGG | - | chr3_3:81421680-81421699 | Msa0477260:intron | 60.0% | |
| GGCCCTGAGAAAGGAAGGAG+AGG | - | chr3_3:81421685-81421704 | Msa0477260:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81419951 | 81422170 | 81419951 | ID=Msa0477260;Name=Msa0477260 |
| chr3_3 | mRNA | 81419951 | 81422170 | 81419951 | ID=Msa0477260-mRNA-1;Parent=Msa0477260;Name=Msa0477260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|1|1|1|0.66|0.5|4|281|392 |
| chr3_3 | exon | 81419951 | 81420828 | 81419951 | ID=Msa0477260-mRNA-1:exon:22451;Parent=Msa0477260-mRNA-1 |
| chr3_3 | exon | 81421028 | 81421504 | 81421028 | ID=Msa0477260-mRNA-1:exon:22450;Parent=Msa0477260-mRNA-1 |
| chr3_3 | exon | 81421702 | 81421857 | 81421702 | ID=Msa0477260-mRNA-1:exon:22449;Parent=Msa0477260-mRNA-1 |
| chr3_3 | exon | 81422074 | 81422170 | 81422074 | ID=Msa0477260-mRNA-1:exon:22448;Parent=Msa0477260-mRNA-1 |
| chr3_3 | five_prime_UTR | 81422074 | 81422170 | 81422074 | ID=Msa0477260-mRNA-1:five_prime_utr;Parent=Msa0477260-mRNA-1 |
| chr3_3 | five_prime_UTR | 81421807 | 81421857 | 81421807 | ID=Msa0477260-mRNA-1:five_prime_utr;Parent=Msa0477260-mRNA-1 |
| chr3_3 | CDS | 81421702 | 81421806 | 81421702 | ID=Msa0477260-mRNA-1:cds;Parent=Msa0477260-mRNA-1 |
| chr3_3 | CDS | 81421028 | 81421504 | 81421028 | ID=Msa0477260-mRNA-1:cds;Parent=Msa0477260-mRNA-1 |
| chr3_3 | CDS | 81420232 | 81420828 | 81420232 | ID=Msa0477260-mRNA-1:cds;Parent=Msa0477260-mRNA-1 |
| chr3_3 | three_prime_UTR | 81419951 | 81420231 | 81419951 | ID=Msa0477260-mRNA-1:three_prime_utr;Parent=Msa0477260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
