Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585920 | XP_039689424.1 | 96.386 | 166 | 6 | 0 | 1 | 166 | 1 | 166 | 2.72e-103 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585920 | sp|Q9S9P0|PDS5E_ARATH | 54.286 | 140 | 64 | 0 | 28 | 167 | 29 | 168 | 3.40e-44 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585920 | A0A072UFL3 | 96.386 | 166 | 6 | 0 | 1 | 166 | 1 | 166 | 1.30e-103 | 325 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030280 | Msa0585920 | 0.800670 | 1.292266e-48 | -8.615850e-47 |
| Msa0032370 | Msa0585920 | 0.808537 | 2.950167e-50 | -8.615850e-47 |
| Msa0039250 | Msa0585920 | 0.800805 | 1.212857e-48 | -8.615850e-47 |
| Msa0046100 | Msa0585920 | 0.812172 | 4.844970e-51 | -8.615850e-47 |
| Msa0061340 | Msa0585920 | 0.816724 | 4.771644e-52 | -8.615850e-47 |
| Msa0110970 | Msa0585920 | 0.801445 | 8.975256e-49 | -8.615850e-47 |
| Msa0114540 | Msa0585920 | -0.806298 | 8.803969e-50 | -8.615850e-47 |
| Msa0124340 | Msa0585920 | 0.817498 | 3.196390e-52 | -8.615850e-47 |
| Msa0133720 | Msa0585920 | 0.816804 | 4.578633e-52 | -8.615850e-47 |
| Msa0133820 | Msa0585920 | 0.813817 | 2.112679e-51 | -8.615850e-47 |
| Msa0142480 | Msa0585920 | 0.807391 | 5.171405e-50 | -8.615850e-47 |
| Msa0144360 | Msa0585920 | 0.806776 | 6.980406e-50 | -8.615850e-47 |
| Msa0146260 | Msa0585920 | 0.806969 | 6.354686e-50 | -8.615850e-47 |
| Msa0152400 | Msa0585920 | 0.826442 | 2.706256e-54 | -8.615850e-47 |
| Msa0369850 | Msa0585920 | 0.807634 | 4.592700e-50 | -8.615850e-47 |
| Msa0410500 | Msa0585920 | 0.824727 | 6.900644e-54 | -8.615850e-47 |
| Msa0423900 | Msa0585920 | 0.826166 | 3.149466e-54 | -8.615850e-47 |
| Msa0452960 | Msa0585920 | 0.802501 | 5.443617e-49 | -8.615850e-47 |
| Msa0467430 | Msa0585920 | 0.804014 | 2.647630e-49 | -8.615850e-47 |
| Msa0245850 | Msa0585920 | 0.801848 | 7.418598e-49 | -8.615850e-47 |
| Msa0287310 | Msa0585920 | 0.809040 | 2.303262e-50 | -8.615850e-47 |
| Msa0299890 | Msa0585920 | 0.800375 | 1.484132e-48 | -8.615850e-47 |
| Msa0325850 | Msa0585920 | 0.805845 | 1.096367e-49 | -8.615850e-47 |
| Msa0334040 | Msa0585920 | 0.820756 | 5.797513e-53 | -8.615850e-47 |
| Msa0498450 | Msa0585920 | 0.801942 | 7.094664e-49 | -8.615850e-47 |
| Msa0546300 | Msa0585920 | 0.800039 | 1.737468e-48 | -8.615850e-47 |
| Msa0584550 | Msa0585920 | 0.801436 | 9.014439e-49 | -8.615850e-47 |
| Msa0585920 | Msa0642720 | 0.802554 | 5.310254e-49 | -8.615850e-47 |
| Msa0585920 | Msa0648520 | 0.811350 | 7.317427e-51 | -8.615850e-47 |
| Msa0585920 | Msa0663250 | 0.809818 | 1.567898e-50 | -8.615850e-47 |
| Msa0585920 | Msa0682550 | 0.805806 | 1.117610e-49 | -8.615850e-47 |
| Msa0585920 | Msa0691050 | 0.818574 | 1.825401e-52 | -8.615850e-47 |
| Msa0585920 | Msa0693380 | 0.801580 | 8.420120e-49 | -8.615850e-47 |
| Msa0585920 | Msa0701280 | 0.804602 | 1.996367e-49 | -8.615850e-47 |
| Msa0585920 | Msa0702340 | 0.822668 | 2.094541e-53 | -8.615850e-47 |
| Msa0585920 | Msa0702570 | 0.800636 | 1.313142e-48 | -8.615850e-47 |
| Msa0585920 | Msa0702590 | 0.818326 | 2.077645e-52 | -8.615850e-47 |
| Msa0585920 | Msa0702660 | 0.820825 | 5.588745e-53 | -8.615850e-47 |
| Msa0585920 | Msa0744040 | 0.802608 | 5.175503e-49 | -8.615850e-47 |
| Msa0585920 | Msa0811130 | 0.805182 | 1.510516e-49 | -8.615850e-47 |
| Msa0585920 | Msa0864010 | 0.802868 | 4.572977e-49 | -8.615850e-47 |
| Msa0585920 | Msa0908050 | 0.810670 | 1.027224e-50 | -8.615850e-47 |
| Msa0585920 | Msa0930780 | 0.804635 | 1.964963e-49 | -8.615850e-47 |
| Msa0585920 | Msa0933440 | 0.807670 | 4.512776e-50 | -8.615850e-47 |
| Msa0585920 | Msa1004420 | 0.804883 | 1.744104e-49 | -8.615850e-47 |
| Msa0585920 | Msa1051600 | 0.806981 | 6.318231e-50 | -8.615850e-47 |
| Msa0585920 | Msa1059960 | 0.810153 | 1.328180e-50 | -8.615850e-47 |
| Msa0585920 | Msa1102770 | 0.806154 | 9.440291e-50 | -8.615850e-47 |
| Msa0585920 | Msa1179940 | 0.815255 | 1.015095e-51 | -8.615850e-47 |
| Msa0585920 | Msa1179970 | 0.811951 | 5.415558e-51 | -8.615850e-47 |
| Msa0585920 | Msa1182770 | 0.818172 | 2.251902e-52 | -8.615850e-47 |
| Msa0585920 | Msa1185540 | 0.811968 | 5.369404e-51 | -8.615850e-47 |
| Msa0585920 | Msa1224830 | 0.824097 | 9.706774e-54 | -8.615850e-47 |
| Msa0585920 | Msa1224840 | 0.821143 | 4.722783e-53 | -8.615850e-47 |
| Msa0585920 | Msa1228290 | 0.809200 | 2.127696e-50 | -8.615850e-47 |
| Msa0585920 | Msa1236100 | 0.816765 | 4.672442e-52 | -8.615850e-47 |
| Msa0585920 | Msa1243040 | 0.813682 | 2.261544e-51 | -8.615850e-47 |
| Msa0585920 | Msa1329450 | 0.802894 | 4.518193e-49 | -8.615850e-47 |
| Msa0585920 | Msa1340510 | 0.805340 | 1.399536e-49 | -8.615850e-47 |
| Msa0585920 | Msa1343070 | 0.804884 | 1.743631e-49 | -8.615850e-47 |
| Msa0585920 | Msa1348360 | 0.800976 | 1.119344e-48 | -8.615850e-47 |
| Msa0585920 | Msa1373330 | 0.824686 | 7.054688e-54 | -8.615850e-47 |
| Msa0585920 | Msa1374040 | 0.814930 | 1.198861e-51 | -8.615850e-47 |
| Msa0585920 | Msa1402270 | 0.807712 | 4.421473e-50 | -8.615850e-47 |
| Msa0585920 | Msa1459180 | 0.802620 | 5.145190e-49 | -8.615850e-47 |
| Msa0585920 | Msa1466460 | 0.803106 | 4.083914e-49 | -8.615850e-47 |
| Msa0585920 | Msa1466590 | 0.806682 | 7.306206e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585920 | MtrunA17_Chr4g0001301 | 96.386 | 166 | 6 | 0 | 1 | 166 | 1 | 166 | 3.72e-107 | 325 |
| Msa0585920 | MtrunA17_Chr4g0013631 | 75.781 | 128 | 30 | 1 | 4 | 131 | 11 | 137 | 5.72e-61 | 187 |
| Msa0585920 | MtrunA17_Chr1g0149971 | 51.429 | 140 | 68 | 0 | 27 | 166 | 24 | 163 | 8.96e-43 | 152 |
| Msa0585920 | MtrunA17_Chr3g0137011 | 45.695 | 151 | 81 | 1 | 16 | 166 | 14 | 163 | 1.17e-39 | 143 |
| Msa0585920 | MtrunA17_Chr4g0076411 | 40.909 | 176 | 91 | 1 | 14 | 189 | 17 | 179 | 5.85e-35 | 130 |
| Msa0585920 | MtrunA17_Chr2g0290621 | 38.636 | 176 | 94 | 2 | 14 | 189 | 9 | 170 | 3.00e-33 | 125 |
| Msa0585920 | MtrunA17_Chr1g0164141 | 31.677 | 161 | 98 | 2 | 17 | 166 | 12 | 171 | 4.22e-22 | 93.6 |
| Msa0585920 | MtrunA17_Chr2g0308141 | 91.892 | 37 | 3 | 0 | 1 | 37 | 1 | 37 | 5.69e-15 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585920 | AT1G15940.1 | 54.286 | 140 | 64 | 0 | 28 | 167 | 29 | 168 | 3.46e-45 | 160 |
| Msa0585920 | AT4G31880.1 | 52.143 | 140 | 67 | 0 | 27 | 166 | 24 | 163 | 1.72e-44 | 157 |
| Msa0585920 | AT4G31880.2 | 52.143 | 140 | 67 | 0 | 27 | 166 | 24 | 163 | 1.99e-44 | 157 |
| Msa0585920 | AT1G80810.5 | 47.239 | 163 | 73 | 1 | 27 | 189 | 26 | 175 | 2.12e-41 | 148 |
| Msa0585920 | AT1G80810.3 | 51.429 | 140 | 68 | 0 | 27 | 166 | 26 | 165 | 4.61e-41 | 148 |
| Msa0585920 | AT1G80810.4 | 51.327 | 113 | 55 | 0 | 54 | 166 | 1 | 113 | 7.23e-34 | 127 |
| Msa0585920 | AT1G80810.2 | 51.327 | 113 | 55 | 0 | 54 | 166 | 1 | 113 | 7.23e-34 | 127 |
| Msa0585920 | AT1G80810.1 | 51.327 | 113 | 55 | 0 | 54 | 166 | 1 | 113 | 7.51e-34 | 127 |
| Msa0585920 | AT5G47690.1 | 44.805 | 154 | 82 | 2 | 14 | 166 | 9 | 160 | 1.21e-32 | 124 |
| Msa0585920 | AT5G47690.3 | 44.805 | 154 | 82 | 2 | 14 | 166 | 9 | 160 | 1.25e-32 | 124 |
| Msa0585920 | AT5G47690.2 | 44.805 | 154 | 82 | 2 | 14 | 166 | 9 | 160 | 1.26e-32 | 124 |
| Msa0585920 | AT1G77600.1 | 37.500 | 144 | 83 | 2 | 30 | 166 | 25 | 168 | 1.97e-21 | 92.0 |
| Msa0585920 | AT1G77600.2 | 37.500 | 144 | 83 | 2 | 30 | 166 | 25 | 168 | 2.27e-21 | 91.7 |
| Msa0585920 | AT1G77600.3 | 37.500 | 144 | 83 | 2 | 30 | 166 | 25 | 168 | 2.58e-21 | 91.7 |
| Msa0585920 | AT5G47690.4 | 46.032 | 63 | 34 | 0 | 104 | 166 | 1 | 63 | 1.63e-11 | 63.2 |
Find 34 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAGAGTCTTAGACATTT+GGG | 0.275725 | 4_2:+7028606 | Msa0585920:CDS |
| AGTGAAGAGTCTTAGACATT+TGG | 0.337357 | 4_2:+7028605 | Msa0585920:CDS |
| TCATCATCATAAGGATCATT+TGG | 0.350083 | 4_2:-7029666 | None:intergenic |
| AGCACAAGTGATTCTTGAAT+TGG | 0.356473 | 4_2:-7029540 | None:intergenic |
| GAAAACTTGTCTCATGCATC+TGG | 0.374684 | 4_2:+7029853 | Msa0585920:CDS |
| GGAGCTGTTATTGTTAAACT+TGG | 0.423021 | 4_2:+7029500 | Msa0585920:CDS |
| GTCCTTCCTTTGCTGATGAC+TGG | 0.434572 | 4_2:-7032094 | None:intergenic |
| AACAGTTCTTGAGAATCATA+AGG | 0.434790 | 4_2:+7029983 | Msa0585920:CDS |
| TCAGAAATCAGTGTCTTCAT+TGG | 0.441541 | 4_2:-7029564 | None:intergenic |
| GACCACCCCTTGCACTTTGG+AGG | 0.469715 | 4_2:+7032033 | Msa0585920:intron |
| CAAAATATTCTTGATCATGC+TGG | 0.472047 | 4_2:+7029924 | Msa0585920:CDS |
| ACCACCCCTTGCACTTTGGA+GGG | 0.488965 | 4_2:+7032034 | Msa0585920:CDS |
| AGTGATTCTTGAATTGGCTC+AGG | 0.518183 | 4_2:-7029534 | None:intergenic |
| GGACCTTGAGTGTGATGACC+TGG | 0.525642 | 4_2:+7029945 | Msa0585920:CDS |
| GAATATCAACAGAAGAAGCT+AGG | 0.531018 | 4_2:-7028647 | None:intergenic |
| GTAGACCACCCCTTGCACTT+TGG | 0.542373 | 4_2:+7032030 | Msa0585920:intron |
| GATTCTTGAATTGGCTCAGG+TGG | 0.552702 | 4_2:-7029531 | None:intergenic |
| GACTCCCCTCCAAAGTGCAA+GGG | 0.560153 | 4_2:-7032039 | None:intergenic |
| CCACCCCTTGCACTTTGGAG+GGG | 0.568140 | 4_2:+7032035 | Msa0585920:CDS |
| TGACTCCCCTCCAAAGTGCA+AGG | 0.577037 | 4_2:-7032040 | None:intergenic |
| GGAGGGGAGTCATAGAAGAA+AGG | 0.578023 | 4_2:+7032051 | Msa0585920:CDS |
| CTGATGACTGGATACTCCGC+GGG | 0.581595 | 4_2:-7032082 | None:intergenic |
| GGAATTATCTTCTATGCATG+AGG | 0.619856 | 4_2:-7032118 | None:intergenic |
| CCCCTCCAAAGTGCAAGGGG+TGG | 0.622044 | 4_2:-7032035 | None:intergenic |
| ATCCAGTCATCAGCAAAGGA+AGG | 0.624998 | 4_2:+7032092 | Msa0585920:CDS |
| GAGTATCCAGTCATCAGCAA+AGG | 0.630166 | 4_2:+7032088 | Msa0585920:CDS |
| ACTCCCCTCCAAAGTGCAAG+GGG | 0.635966 | 4_2:-7032038 | None:intergenic |
| TGAAGAGTCTTAGACATTTG+GGG | 0.637901 | 4_2:+7028607 | Msa0585920:CDS |
| ATGACTGGATACTCCGCGGG+TGG | 0.664328 | 4_2:-7032079 | None:intergenic |
| CAACCAGGTCATCACACTCA+AGG | 0.666022 | 4_2:-7029948 | None:intergenic |
| AAGAAAGGTACGACCACCCG+CGG | 0.670881 | 4_2:+7032066 | Msa0585920:CDS |
| GCTGATGACTGGATACTCCG+CGG | 0.689411 | 4_2:-7032083 | None:intergenic |
| TGATTCTTGCAATCTCAGTG+AGG | 0.707045 | 4_2:-7029638 | None:intergenic |
| GTTGAAACATCTCAACAACC+AGG | 0.707803 | 4_2:-7029963 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTTATAAGCTTTTTA+AGG | - | chr4_2:7030731-7030750 | None:intergenic | 10.0% |
| !! | TTATATAATAAATGATGTAT+GGG | + | chr4_2:7030956-7030975 | Msa0585920:intron | 10.0% |
| !!! | AATTTATTTTGCTTTATATA+TGG | - | chr4_2:7031312-7031331 | None:intergenic | 10.0% |
| !! | AAAAAAATTATTGAATAAGT+AGG | - | chr4_2:7031556-7031575 | None:intergenic | 10.0% |
| !! | TCAATAGATACATTAAAAAA+TGG | - | chr4_2:7028714-7028733 | None:intergenic | 15.0% |
| !! | TAAACTAAATATAAATCCTT+AGG | - | chr4_2:7029358-7029377 | None:intergenic | 15.0% |
| !!! | NNNNNNNATTTTGAGAATGA+TGG | - | chr4_2:7030059-7030078 | None:intergenic | 15.0% |
| !!! | AACTTTTTTTTAAGAAACTT+AGG | + | chr4_2:7030526-7030545 | Msa0585920:intron | 15.0% |
| !! | GTTATATAATAAATGATGTA+TGG | + | chr4_2:7030955-7030974 | Msa0585920:intron | 15.0% |
| !!! | AAAGAATATTCCTATTTTTT+GGG | + | chr4_2:7031378-7031397 | Msa0585920:intron | 15.0% |
| !!! | TTCAATAATTTTTTTCTCTT+TGG | + | chr4_2:7031561-7031580 | Msa0585920:intron | 15.0% |
| !!! | TCAATAATTTTTTTCTCTTT+GGG | + | chr4_2:7031562-7031581 | Msa0585920:intron | 15.0% |
| !! | TACATTAAAAAATGGAAGAA+AGG | - | chr4_2:7028706-7028725 | None:intergenic | 20.0% |
| !! | GTTCAATTACAATGTAATTT+AGG | - | chr4_2:7028767-7028786 | None:intergenic | 20.0% |
| !! | GATATTTGATGTTTCAAATT+AGG | + | chr4_2:7029406-7029425 | Msa0585920:intron | 20.0% |
| !!! | TGATTTTCACTTTTAGAAAA+TGG | + | chr4_2:7029479-7029498 | Msa0585920:intron | 20.0% |
| !!! | TTCATTTTTTCATCATCATA+AGG | - | chr4_2:7029678-7029697 | None:intergenic | 20.0% |
| !!! | TTATGATGATGAAAAAATGA+AGG | + | chr4_2:7029677-7029696 | Msa0585920:CDS | 20.0% |
| !! | TTTATACTCATCATCTATTA+TGG | - | chr4_2:7029739-7029758 | None:intergenic | 20.0% |
| !!! | CTTTGAAATTTTTTCAAGTA+TGG | - | chr4_2:7029902-7029921 | None:intergenic | 20.0% |
| !! | TACATTTCCAAATGATATTA+TGG | - | chr4_2:7030314-7030333 | None:intergenic | 20.0% |
| !!! | TGATAATCAATGCATATTTT+GGG | - | chr4_2:7030618-7030637 | None:intergenic | 20.0% |
| !!! | TTGATAATCAATGCATATTT+TGG | - | chr4_2:7030619-7030638 | None:intergenic | 20.0% |
| !! | TAAAACATATAGAGTTCATT+TGG | - | chr4_2:7030811-7030830 | None:intergenic | 20.0% |
| !!! | AATTTGAAATAAGTATTGCA+TGG | + | chr4_2:7030872-7030891 | Msa0585920:intron | 20.0% |
| !! | AGATTCATTCAATATGTATA+TGG | - | chr4_2:7031109-7031128 | None:intergenic | 20.0% |
| !!! | TATTGAATGAATCTAAAATG+TGG | + | chr4_2:7031115-7031134 | Msa0585920:intron | 20.0% |
| !!! | ATTGAATGAATCTAAAATGT+GGG | + | chr4_2:7031116-7031135 | Msa0585920:intron | 20.0% |
| !!! | CAAAGAATATTCCTATTTTT+TGG | + | chr4_2:7031377-7031396 | Msa0585920:intron | 20.0% |
| !! | TAGCCAACTATATATTATTA+GGG | + | chr4_2:7031509-7031528 | Msa0585920:intron | 20.0% |
| !!! | CAATAATTTTTTTCTCTTTG+GGG | + | chr4_2:7031563-7031582 | Msa0585920:intron | 20.0% |
| ! | TTACATTGTAATTGAACTTC+TGG | + | chr4_2:7028770-7028789 | Msa0585920:intron | 25.0% |
| ! | TTAATTAGATGCAAACCTTA+TGG | + | chr4_2:7028914-7028933 | Msa0585920:intron | 25.0% |
| ! | TTCATTTCTCAAATTGTTAC+CGG | + | chr4_2:7029035-7029054 | Msa0585920:intron | 25.0% |
| ! | AGAGAACATGATATTAATTG+CGG | - | chr4_2:7030258-7030277 | None:intergenic | 25.0% |
| ! | ATGTCATCCATAATATCATT+TGG | + | chr4_2:7030304-7030323 | Msa0585920:intron | 25.0% |
| ! | TTGTAAAATAGTACTCTAAC+TGG | + | chr4_2:7030381-7030400 | Msa0585920:intron | 25.0% |
| ! | TGTAAAATAGTACTCTAACT+GGG | + | chr4_2:7030382-7030401 | Msa0585920:intron | 25.0% |
| !! | GAAAGTTCTATCAAGTTTTA+TGG | + | chr4_2:7030561-7030580 | Msa0585920:intron | 25.0% |
| !!! | AAGCTTTTTAAGGTAGTTTA+TGG | - | chr4_2:7030721-7030740 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr4_2:7031007-7031026 | None:intergenic | 25.0% |
| !!! | CTTACTTTTCAATCAAACTT+TGG | - | chr4_2:7031443-7031462 | None:intergenic | 25.0% |
| ! | ATTCTACCTAAAATTGAACT+TGG | + | chr4_2:7031484-7031503 | Msa0585920:intron | 25.0% |
| ! | TTCTACCTAAAATTGAACTT+GGG | + | chr4_2:7031485-7031504 | Msa0585920:intron | 25.0% |
| ! | GTAGCCAACTATATATTATT+AGG | + | chr4_2:7031508-7031527 | Msa0585920:intron | 25.0% |
| ! | AGCCAACTATATATTATTAG+GGG | + | chr4_2:7031510-7031529 | Msa0585920:intron | 25.0% |
| ! | TACCCCTAATAATATATAGT+TGG | - | chr4_2:7031515-7031534 | None:intergenic | 25.0% |
| ! | CTTATGTTATAAGTTAAGCT+TGG | - | chr4_2:7031686-7031705 | None:intergenic | 25.0% |
| ! | CAAGCTTAACTTATAACATA+AGG | + | chr4_2:7031684-7031703 | Msa0585920:intron | 25.0% |
| !!! | GTTTTGTTATGAGATTAATC+CGG | - | chr4_2:7031816-7031835 | None:intergenic | 25.0% |
| ! | TCAGATCAACTACTATAATT+AGG | + | chr4_2:7031884-7031903 | Msa0585920:intron | 25.0% |
| ! | CAGATCAACTACTATAATTA+GGG | + | chr4_2:7031885-7031904 | Msa0585920:intron | 25.0% |
| ! | AGATCAACTACTATAATTAG+GGG | + | chr4_2:7031886-7031905 | Msa0585920:intron | 25.0% |
| TATCTTCTGATCATGAGTTT+AGG | + | chr4_2:7028850-7028869 | Msa0585920:intron | 30.0% | |
| ATCTTCTGATCATGAGTTTA+GGG | + | chr4_2:7028851-7028870 | Msa0585920:intron | 30.0% | |
| !! | GTGTCAATTTTTGTTTCCTA+AGG | + | chr4_2:7029339-7029358 | Msa0585920:intron | 30.0% |
| TTAGGCATAGCAATGTAATT+AGG | + | chr4_2:7029424-7029443 | Msa0585920:intron | 30.0% | |
| !!! | TGACTTTTTTACCTTCTGTT+TGG | + | chr4_2:7029456-7029475 | Msa0585920:intron | 30.0% |
| TCATCATCATAAGGATCATT+TGG | - | chr4_2:7029669-7029688 | None:intergenic | 30.0% | |
| AAATTCCTGTTAACAGTGAA+CGG | - | chr4_2:7029809-7029828 | None:intergenic | 30.0% | |
| !!! | GGAATTTTTTAAGCTTACAG+TGG | + | chr4_2:7029822-7029841 | Msa0585920:intron | 30.0% |
| CAAAATATTCTTGATCATGC+TGG | + | chr4_2:7029924-7029943 | Msa0585920:CDS | 30.0% | |
| AACAGTTCTTGAGAATCATA+AGG | + | chr4_2:7029983-7030002 | Msa0585920:CDS | 30.0% | |
| TTGTGACAGTCTTTGTATAA+GGG | - | chr4_2:7030015-7030034 | None:intergenic | 30.0% | |
| TTTGTGACAGTCTTTGTATA+AGG | - | chr4_2:7030016-7030035 | None:intergenic | 30.0% | |
| ! | AATCCACTCTTAGTCTTTAT+TGG | + | chr4_2:7030213-7030232 | Msa0585920:intron | 30.0% |
| GTAAAATAGTACTCTAACTG+GGG | + | chr4_2:7030383-7030402 | Msa0585920:intron | 30.0% | |
| TGGTTATTTACCGATAGTAA+AGG | + | chr4_2:7030464-7030483 | Msa0585920:intron | 30.0% | |
| !!! | ATGCATATTTTGGGTTTTCT+AGG | - | chr4_2:7030609-7030628 | None:intergenic | 30.0% |
| CATATAGAGTTCATTTGGAT+TGG | - | chr4_2:7030806-7030825 | None:intergenic | 30.0% | |
| GTGGTTTATATATCTTGATG+AGG | - | chr4_2:7031255-7031274 | None:intergenic | 30.0% | |
| TCTACCTAAAATTGAACTTG+GGG | + | chr4_2:7031486-7031505 | Msa0585920:intron | 30.0% | |
| ATGTTATAAGTTAAGCTTGG+AGG | - | chr4_2:7031683-7031702 | None:intergenic | 30.0% | |
| ACAAAACTAGAGTAAAGCTA+AGG | + | chr4_2:7031829-7031848 | Msa0585920:intron | 30.0% | |
| ATAGTAGTTGATCTGATGAT+AGG | - | chr4_2:7031880-7031899 | None:intergenic | 30.0% | |
| GATCAACTACTATAATTAGG+GGG | + | chr4_2:7031887-7031906 | Msa0585920:intron | 30.0% | |
| AGTGAAGAGTCTTAGACATT+TGG | + | chr4_2:7028605-7028624 | Msa0585920:CDS | 35.0% | |
| GTGAAGAGTCTTAGACATTT+GGG | + | chr4_2:7028606-7028625 | Msa0585920:CDS | 35.0% | |
| TGAAGAGTCTTAGACATTTG+GGG | + | chr4_2:7028607-7028626 | Msa0585920:CDS | 35.0% | |
| ! | AACAGAAGAAGCTAGGTTTT+TGG | - | chr4_2:7028643-7028662 | None:intergenic | 35.0% |
| GAATATCAACAGAAGAAGCT+AGG | - | chr4_2:7028650-7028669 | None:intergenic | 35.0% | |
| ATGCAGTAAACAACTGTAAG+AGG | - | chr4_2:7029381-7029400 | None:intergenic | 35.0% | |
| AGTGAAAATCACCAAACAGA+AGG | - | chr4_2:7029470-7029489 | None:intergenic | 35.0% | |
| GGAGCTGTTATTGTTAAACT+TGG | + | chr4_2:7029500-7029519 | Msa0585920:CDS | 35.0% | |
| AGCACAAGTGATTCTTGAAT+TGG | - | chr4_2:7029543-7029562 | None:intergenic | 35.0% | |
| TCAGAAATCAGTGTCTTCAT+TGG | - | chr4_2:7029567-7029586 | None:intergenic | 35.0% | |
| ACAAAGACTGTCACAAATAC+TGG | + | chr4_2:7030019-7030038 | Msa0585920:intron | 35.0% | |
| !! | GACTAAGAGTGGATTAATGT+AGG | - | chr4_2:7030208-7030227 | None:intergenic | 35.0% |
| GTACCAATAAAGACTAAGAG+TGG | - | chr4_2:7030219-7030238 | None:intergenic | 35.0% | |
| ! | AAATGAACTTGTGACTTGTG+AGG | + | chr4_2:7030419-7030438 | Msa0585920:intron | 35.0% |
| ! | GAAATTCTAGAGAGAAGCTT+TGG | + | chr4_2:7030444-7030463 | Msa0585920:intron | 35.0% |
| TCCTTATGCTCCTTTACTAT+CGG | - | chr4_2:7030477-7030496 | None:intergenic | 35.0% | |
| AAATTGATGTATGTGACCTC+CGG | + | chr4_2:7030985-7031004 | Msa0585920:intron | 35.0% | |
| TATATCGTTTAGCCACAATG+TGG | + | chr4_2:7031141-7031160 | Msa0585920:intron | 35.0% | |
| CATTGTATCTAACCACATTG+TGG | - | chr4_2:7031156-7031175 | None:intergenic | 35.0% | |
| CAAGATATATAAACCACCAG+CGG | + | chr4_2:7031258-7031277 | Msa0585920:intron | 35.0% | |
| ! | AAGCTAGCAAAATTTTCCTG+AGG | + | chr4_2:7031283-7031302 | Msa0585920:intron | 35.0% |
| TTATAAGTTAAGCTTGGAGG+CGG | - | chr4_2:7031680-7031699 | None:intergenic | 35.0% | |
| CTACCATGTTGCTCATATAT+GGG | + | chr4_2:7031711-7031730 | Msa0585920:intron | 35.0% | |
| AGAGAAGATTGCAATCAACA+AGG | + | chr4_2:7031852-7031871 | Msa0585920:intron | 35.0% | |
| ! | TGAGTTTAGGGCTTGTGTTA+TGG | + | chr4_2:7028863-7028882 | Msa0585920:intron | 40.0% |
| ACTCTGCTCAATGCCAATTT+CGG | + | chr4_2:7029115-7029134 | Msa0585920:intron | 40.0% | |
| CAGTGCTTGATAGAACACTA+TGG | + | chr4_2:7029183-7029202 | Msa0585920:intron | 40.0% | |
| ! | AGTGATTCTTGAATTGGCTC+AGG | - | chr4_2:7029537-7029556 | None:intergenic | 40.0% |
| TGATTCTTGCAATCTCAGTG+AGG | - | chr4_2:7029641-7029660 | None:intergenic | 40.0% | |
| GAAAACTTGTCTCATGCATC+TGG | + | chr4_2:7029853-7029872 | Msa0585920:CDS | 40.0% | |
| !!! | CAAGTGCTTTTTCGTATCTG+CGG | - | chr4_2:7029879-7029898 | None:intergenic | 40.0% |
| GTTGAAACATCTCAACAACC+AGG | - | chr4_2:7029966-7029985 | None:intergenic | 40.0% | |
| ! | ACCGATAGTAAAGGAGCATA+AGG | + | chr4_2:7030473-7030492 | Msa0585920:intron | 40.0% |
| !!! | GGGTTTTCTAGGATGATGAA+GGG | - | chr4_2:7030598-7030617 | None:intergenic | 40.0% |
| !!! | TGGGTTTTCTAGGATGATGA+AGG | - | chr4_2:7030599-7030618 | None:intergenic | 40.0% |
| TTGCTTATAATAGTGACCGG+AGG | - | chr4_2:7031004-7031023 | None:intergenic | 40.0% | |
| ! | CTAGCAAAATTTTCCTGAGG+TGG | + | chr4_2:7031286-7031305 | Msa0585920:intron | 40.0% |
| ! | AGGGTTAGCACCCAAAAAAT+AGG | - | chr4_2:7031391-7031410 | None:intergenic | 40.0% |
| ! | GCTACCCCAAGTTCAATTTT+AGG | - | chr4_2:7031493-7031512 | None:intergenic | 40.0% |
| GCTACCATGTTGCTCATATA+TGG | + | chr4_2:7031710-7031729 | Msa0585920:intron | 40.0% | |
| AGTTACCAACTGCCCAAATA+GGG | - | chr4_2:7031786-7031805 | None:intergenic | 40.0% | |
| AAGTTACCAACTGCCCAAAT+AGG | - | chr4_2:7031787-7031806 | None:intergenic | 40.0% | |
| !! | CAGTTGGTAACTTCGATATC+CGG | + | chr4_2:7031794-7031813 | Msa0585920:intron | 40.0% |
| AATGTGTAGTCGTCATACCT+GGG | - | chr4_2:7031920-7031939 | None:intergenic | 40.0% | |
| TAATGTGTAGTCGTCATACC+TGG | - | chr4_2:7031921-7031940 | None:intergenic | 40.0% | |
| TAGCTGATAGCAGACAGATT+TGG | - | chr4_2:7031975-7031994 | None:intergenic | 40.0% | |
| GCAAACCTTATGGTTGAGTG+AGG | + | chr4_2:7028924-7028943 | Msa0585920:intron | 45.0% | |
| AACCTTATGGTTGAGTGAGG+TGG | + | chr4_2:7028927-7028946 | Msa0585920:intron | 45.0% | |
| TTCCACCTCACTCAACCATA+AGG | - | chr4_2:7028932-7028951 | None:intergenic | 45.0% | |
| ! | ACACCTTTGATCAGAGGTGT+TGG | - | chr4_2:7028968-7028987 | None:intergenic | 45.0% |
| !! | CCTCTGATCAAAGGTGTTTC+CGG | + | chr4_2:7028971-7028990 | Msa0585920:intron | 45.0% |
| CAAATTGTTACCGGTGTCTG+TGG | + | chr4_2:7029044-7029063 | Msa0585920:intron | 45.0% | |
| CTTAGAGTGTGTTCCTCTCA+GGG | + | chr4_2:7029081-7029100 | Msa0585920:intron | 45.0% | |
| TGCTCAATGCCAATTTCGGT+GGG | + | chr4_2:7029119-7029138 | Msa0585920:intron | 45.0% | |
| CTTATCCCACTAAGTGAGGT+CGG | - | chr4_2:7029228-7029247 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+AGG | - | chr4_2:7029232-7029251 | None:intergenic | 45.0% |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr4_2:7029231-7029250 | Msa0585920:intron | 45.0% | |
| ! | GATTCTTGAATTGGCTCAGG+TGG | - | chr4_2:7029534-7029553 | None:intergenic | 45.0% |
| CATCTCCGTTCACTGTTAAC+AGG | + | chr4_2:7029801-7029820 | Msa0585920:intron | 45.0% | |
| ! | ATGGAGAGTATGATTGCTCG+CGG | + | chr4_2:7030891-7030910 | Msa0585920:intron | 45.0% |
| GGGTCGTGTTGAATCAGTAT+GGG | + | chr4_2:7030912-7030931 | Msa0585920:intron | 45.0% | |
| TCAGAACCAACACCTCAGAA+TGG | + | chr4_2:7031209-7031228 | Msa0585920:intron | 45.0% | |
| CTATATCGCACTCCATTCTG+AGG | - | chr4_2:7031224-7031243 | None:intergenic | 45.0% | |
| GCTTTATATATGGCCACCTC+AGG | - | chr4_2:7031302-7031321 | None:intergenic | 45.0% | |
| !!! | TTTTTTGGGTGCTAACCCTC+CGG | + | chr4_2:7031392-7031411 | Msa0585920:intron | 45.0% |
| TGATCCCGTCTCCTAAAAAC+CGG | - | chr4_2:7031414-7031433 | None:intergenic | 45.0% | |
| AAAGCACGTAGGCGTTATGT+CGG | - | chr4_2:7031656-7031675 | None:intergenic | 45.0% | |
| GGTCCCATATATGAGCAACA+TGG | - | chr4_2:7031717-7031736 | None:intergenic | 45.0% | |
| TAACGAAACCCGAGGTAGAT+GGG | - | chr4_2:7031761-7031780 | None:intergenic | 45.0% | |
| GGTTTCGTTACCCCCTATTT+GGG | + | chr4_2:7031771-7031790 | Msa0585920:intron | 45.0% | |
| TTACCAACTGCCCAAATAGG+GGG | - | chr4_2:7031784-7031803 | None:intergenic | 45.0% | |
| GTTACCAACTGCCCAAATAG+GGG | - | chr4_2:7031785-7031804 | None:intergenic | 45.0% | |
| ATGTGTAGTCGTCATACCTG+GGG | - | chr4_2:7031919-7031938 | None:intergenic | 45.0% | |
| ! | TCTAAAGCTCAAGTCAAGCG+AGG | - | chr4_2:7032001-7032020 | None:intergenic | 45.0% |
| GAGTATCCAGTCATCAGCAA+AGG | + | chr4_2:7032088-7032107 | Msa0585920:CDS | 45.0% | |
| ATCCAGTCATCAGCAAAGGA+AGG | + | chr4_2:7032092-7032111 | Msa0585920:CDS | 45.0% | |
| GCACCAACACCTCTGATCAA+AGG | + | chr4_2:7028962-7028981 | Msa0585920:intron | 50.0% | |
| CCGGAAACACCTTTGATCAG+AGG | - | chr4_2:7028974-7028993 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCGTGT+CGG | - | chr4_2:7029000-7029019 | None:intergenic | 50.0% | |
| CAAGCTAACACCACAGACAC+CGG | - | chr4_2:7029057-7029076 | None:intergenic | 50.0% | |
| ! | GGTGTCTGTGGTGTTAGCTT+GGG | + | chr4_2:7029056-7029075 | Msa0585920:intron | 50.0% |
| CCTGAGAGGAACACACTCTA+AGG | - | chr4_2:7029083-7029102 | None:intergenic | 50.0% | |
| CCTTAGAGTGTGTTCCTCTC+AGG | + | chr4_2:7029080-7029099 | Msa0585920:intron | 50.0% | |
| CTGCTCAATGCCAATTTCGG+TGG | + | chr4_2:7029118-7029137 | Msa0585920:intron | 50.0% | |
| CCAAACTAGCCCACCGAAAT+TGG | - | chr4_2:7029131-7029150 | None:intergenic | 50.0% | |
| !! | CCAATTTCGGTGGGCTAGTT+TGG | + | chr4_2:7029128-7029147 | Msa0585920:intron | 50.0% |
| ACTAAGTGAGGTCGGCTACA+TGG | - | chr4_2:7029220-7029239 | None:intergenic | 50.0% | |
| ATGTAGCCGACCTCACTTAG+TGG | + | chr4_2:7029219-7029238 | Msa0585920:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+GGG | + | chr4_2:7029220-7029239 | Msa0585920:intron | 50.0% | |
| CGACCTCACTTAGTGGGATA+AGG | + | chr4_2:7029226-7029245 | Msa0585920:intron | 50.0% | |
| ACTTGTGTCAGTGTCCTGTC+CGG | + | chr4_2:7029279-7029298 | Msa0585920:intron | 50.0% | |
| ACCAACACAGACACGTACAC+CGG | - | chr4_2:7029301-7029320 | None:intergenic | 50.0% | |
| CAACCAGGTCATCACACTCA+AGG | - | chr4_2:7029951-7029970 | None:intergenic | 50.0% | |
| ! | TGGAGAGTATGATTGCTCGC+GGG | + | chr4_2:7030892-7030911 | Msa0585920:intron | 50.0% |
| CGGGTCGTGTTGAATCAGTA+TGG | + | chr4_2:7030911-7030930 | Msa0585920:intron | 50.0% | |
| TTCTGACAAGGTGGTGAAGG+AGG | - | chr4_2:7031195-7031214 | None:intergenic | 50.0% | |
| !! | TGGTTCTGACAAGGTGGTGA+AGG | - | chr4_2:7031198-7031217 | None:intergenic | 50.0% |
| !! | AGGTGTTGGTTCTGACAAGG+TGG | - | chr4_2:7031204-7031223 | None:intergenic | 50.0% |
| !! | CTGAGGTGTTGGTTCTGACA+AGG | - | chr4_2:7031207-7031226 | None:intergenic | 50.0% |
| !! | AATTTTGCTAGCTTCGCCGC+TGG | - | chr4_2:7031277-7031296 | None:intergenic | 50.0% |
| ! | GTGCTAACCCTCCGGTTTTT+AGG | + | chr4_2:7031400-7031419 | Msa0585920:intron | 50.0% |
| !! | ACCCTCCGGTTTTTAGGAGA+CGG | + | chr4_2:7031406-7031425 | Msa0585920:intron | 50.0% |
| CGTATGCTTTCAGGACCAAG+GGG | - | chr4_2:7031601-7031620 | None:intergenic | 50.0% | |
| GCGTATGCTTTCAGGACCAA+GGG | - | chr4_2:7031602-7031621 | None:intergenic | 50.0% | |
| ! | TTACAGGGGCGTATGCTTTC+AGG | - | chr4_2:7031610-7031629 | None:intergenic | 50.0% |
| TGGAACGAGGTCGTTTACAG+GGG | - | chr4_2:7031624-7031643 | None:intergenic | 50.0% | |
| GTGGAACGAGGTCGTTTACA+GGG | - | chr4_2:7031625-7031644 | None:intergenic | 50.0% | |
| GTAACGAAACCCGAGGTAGA+TGG | - | chr4_2:7031762-7031781 | None:intergenic | 50.0% | |
| GGGTTTCGTTACCCCCTATT+TGG | + | chr4_2:7031770-7031789 | Msa0585920:intron | 50.0% | |
| TTACCCCCTATTTGGGCAGT+TGG | + | chr4_2:7031778-7031797 | Msa0585920:intron | 50.0% | |
| GGAGGGGAGTCATAGAAGAA+AGG | + | chr4_2:7032051-7032070 | Msa0585920:CDS | 50.0% | |
| GTCCTTCCTTTGCTGATGAC+TGG | - | chr4_2:7032097-7032116 | None:intergenic | 50.0% | |
| ! | CGGTGTCTGTGGTGTTAGCT+TGG | + | chr4_2:7029055-7029074 | Msa0585920:intron | 55.0% |
| GTGTGTTCCTCTCAGGGTCT+CGG | + | chr4_2:7029087-7029106 | Msa0585920:intron | 55.0% | |
| TGTGTTCCTCTCAGGGTCTC+GGG | + | chr4_2:7029088-7029107 | Msa0585920:intron | 55.0% | |
| TCCGGTGTACGTGTCTGTGT+TGG | + | chr4_2:7029297-7029316 | Msa0585920:intron | 55.0% | |
| GGACCTTGAGTGTGATGACC+TGG | + | chr4_2:7029945-7029964 | Msa0585920:CDS | 55.0% | |
| !! | CGCACTCCATTCTGAGGTGT+TGG | - | chr4_2:7031218-7031237 | None:intergenic | 55.0% |
| CCCGTCTCCTAAAAACCGGA+GGG | - | chr4_2:7031410-7031429 | None:intergenic | 55.0% | |
| !! | CCCTCCGGTTTTTAGGAGAC+GGG | + | chr4_2:7031407-7031426 | Msa0585920:intron | 55.0% |
| TCCCGTCTCCTAAAAACCGG+AGG | - | chr4_2:7031411-7031430 | None:intergenic | 55.0% | |
| ATGCTTTCAGGACCAAGGGG+TGG | - | chr4_2:7031598-7031617 | None:intergenic | 55.0% | |
| GGCGTATGCTTTCAGGACCA+AGG | - | chr4_2:7031603-7031622 | None:intergenic | 55.0% | |
| GGTGGAACGAGGTCGTTTAC+AGG | - | chr4_2:7031626-7031645 | None:intergenic | 55.0% | |
| CGTTATGTCGGTGTACGAGG+TGG | - | chr4_2:7031644-7031663 | None:intergenic | 55.0% | |
| AGGCGTTATGTCGGTGTACG+AGG | - | chr4_2:7031647-7031666 | None:intergenic | 55.0% | |
| AGGTAGATGGGCGCGTTATC+GGG | - | chr4_2:7031749-7031768 | None:intergenic | 55.0% | |
| GAGGTAGATGGGCGCGTTAT+CGG | - | chr4_2:7031750-7031769 | None:intergenic | 55.0% | |
| GATAACGCGCCCATCTACCT+CGG | + | chr4_2:7031749-7031768 | Msa0585920:intron | 55.0% | |
| ATAACGCGCCCATCTACCTC+GGG | + | chr4_2:7031750-7031769 | Msa0585920:intron | 55.0% | |
| ATAGGGGGTAACGAAACCCG+AGG | - | chr4_2:7031769-7031788 | None:intergenic | 55.0% | |
| AATTAGGGGGTCTCAACCCC+AGG | + | chr4_2:7031900-7031919 | Msa0585920:intron | 55.0% | |
| GTAGACCACCCCTTGCACTT+TGG | + | chr4_2:7032030-7032049 | Msa0585920:intron | 55.0% | |
| ACCACCCCTTGCACTTTGGA+GGG | + | chr4_2:7032034-7032053 | Msa0585920:CDS | 55.0% | |
| ACTCCCCTCCAAAGTGCAAG+GGG | - | chr4_2:7032041-7032060 | None:intergenic | 55.0% | |
| GACTCCCCTCCAAAGTGCAA+GGG | - | chr4_2:7032042-7032061 | None:intergenic | 55.0% | |
| TGACTCCCCTCCAAAGTGCA+AGG | - | chr4_2:7032043-7032062 | None:intergenic | 55.0% | |
| ! | AAGAAAGGTACGACCACCCG+CGG | + | chr4_2:7032066-7032085 | Msa0585920:CDS | 55.0% |
| CTGATGACTGGATACTCCGC+GGG | - | chr4_2:7032085-7032104 | None:intergenic | 55.0% | |
| GCTGATGACTGGATACTCCG+CGG | - | chr4_2:7032086-7032105 | None:intergenic | 55.0% | |
| GTCAGTGTCGTGTCGGACAC+CGG | - | chr4_2:7028993-7029012 | None:intergenic | 60.0% | |
| GTCAAACCCGAGACCCTGAG+AGG | - | chr4_2:7029097-7029116 | None:intergenic | 60.0% | |
| CACAGACACGTACACCGGAC+AGG | - | chr4_2:7029296-7029315 | None:intergenic | 60.0% | |
| ! | TTTGCTAGCTTCGCCGCTGG+TGG | - | chr4_2:7031274-7031293 | None:intergenic | 60.0% |
| TCAGGACCAAGGGGTGGCTA+TGG | - | chr4_2:7031592-7031611 | None:intergenic | 60.0% | |
| TCGGTGTACGAGGTGGAACG+AGG | - | chr4_2:7031637-7031656 | None:intergenic | 60.0% | |
| TTGGAGGCGGCAAAGCACGT+AGG | - | chr4_2:7031667-7031686 | None:intergenic | 60.0% | |
| CGCGTTATCGGGTTCAGGTG+AGG | - | chr4_2:7031738-7031757 | None:intergenic | 60.0% | |
| ATGGGCGCGTTATCGGGTTC+AGG | - | chr4_2:7031743-7031762 | None:intergenic | 60.0% | |
| GACCACCCCTTGCACTTTGG+AGG | + | chr4_2:7032033-7032052 | Msa0585920:intron | 60.0% | |
| ! | CCACCCCTTGCACTTTGGAG+GGG | + | chr4_2:7032035-7032054 | Msa0585920:CDS | 60.0% |
| ATGACTGGATACTCCGCGGG+TGG | - | chr4_2:7032082-7032101 | None:intergenic | 60.0% | |
| GGGTAGCCATAGCCACCCCT+TGG | + | chr4_2:7031583-7031602 | Msa0585920:intron | 65.0% | |
| CCCCTCCAAAGTGCAAGGGG+TGG | - | chr4_2:7032038-7032057 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7028570 | 7032136 | 7028570 | ID=Msa0585920;Name=Msa0585920 |
| chr4_2 | mRNA | 7028570 | 7032136 | 7028570 | ID=Msa0585920-mRNA-1;Parent=Msa0585920;Name=Msa0585920-mRNA-1;_AED=0.22;_eAED=0.22;_QI=6|0.66|0.5|0.75|1|1|4|0|199 |
| chr4_2 | exon | 7028570 | 7028686 | 7028570 | ID=Msa0585920-mRNA-1:exon:1767;Parent=Msa0585920-mRNA-1 |
| chr4_2 | exon | 7029495 | 7029698 | 7029495 | ID=Msa0585920-mRNA-1:exon:1768;Parent=Msa0585920-mRNA-1 |
| chr4_2 | exon | 7029823 | 7030004 | 7029823 | ID=Msa0585920-mRNA-1:exon:1769;Parent=Msa0585920-mRNA-1 |
| chr4_2 | exon | 7032034 | 7032136 | 7032034 | ID=Msa0585920-mRNA-1:exon:1770;Parent=Msa0585920-mRNA-1 |
| chr4_2 | five_prime_UTR | 7028570 | 7028575 | 7028570 | ID=Msa0585920-mRNA-1:five_prime_utr;Parent=Msa0585920-mRNA-1 |
| chr4_2 | CDS | 7028576 | 7028686 | 7028576 | ID=Msa0585920-mRNA-1:cds;Parent=Msa0585920-mRNA-1 |
| chr4_2 | CDS | 7029495 | 7029698 | 7029495 | ID=Msa0585920-mRNA-1:cds;Parent=Msa0585920-mRNA-1 |
| chr4_2 | CDS | 7029823 | 7030004 | 7029823 | ID=Msa0585920-mRNA-1:cds;Parent=Msa0585920-mRNA-1 |
| chr4_2 | CDS | 7032034 | 7032136 | 7032034 | ID=Msa0585920-mRNA-1:cds;Parent=Msa0585920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
