AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0325850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325850 MtrunA17_Chr2g0304261 96.694 726 23 1 1 726 1 725 0.0 1443
Msa0325850 MtrunA17_Chr1g0149561 50.746 737 319 13 1 724 1 706 0.0 704
Msa0325850 MtrunA17_Chr4g0075481 38.174 723 351 11 32 672 31 739 1.03e-145 444
Msa0325850 MtrunA17_Chr2g0289351 41.163 447 222 7 239 677 29 442 1.31e-101 320
Msa0325850 MtrunA17_Chr7g0237741 36.752 117 69 2 37 150 92 206 3.38e-15 76.6
Msa0325850 MtrunA17_Chr2g0323971 34.188 117 72 2 37 150 95 209 6.10e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325850 AT2G25290.2 52.710 738 311 12 10 726 20 740 0.0 731
Msa0325850 AT2G25290.3 52.710 738 311 12 10 726 20 740 0.0 731
Msa0325850 AT2G25290.4 52.710 738 311 12 10 726 20 740 0.0 731
Msa0325850 AT2G25290.1 52.710 738 311 12 10 726 20 740 0.0 731
Msa0325850 AT4G32070.2 50.734 749 309 13 28 726 39 777 0.0 709
Msa0325850 AT4G32070.1 50.734 749 309 13 28 726 39 777 0.0 709
Msa0325850 AT5G20360.1 47.489 697 337 11 37 722 123 801 0.0 600
Msa0325850 AT5G20360.2 47.489 697 337 11 37 722 123 801 0.0 600
Msa0325850 AT5G20360.3 47.489 697 337 11 37 722 113 791 0.0 599
Msa0325850 AT5G20360.7 47.489 697 337 11 37 722 63 741 0.0 599
Msa0325850 AT5G20360.4 47.489 697 337 11 37 722 63 741 0.0 599
Msa0325850 AT5G20360.5 47.489 697 337 11 37 722 33 711 0.0 597
Msa0325850 AT5G20360.6 47.489 697 337 11 37 722 33 711 0.0 597
Msa0325850 AT1G62390.1 37.921 712 367 11 28 675 39 739 3.90e-144 440
Msa0325850 AT4G30480.2 35.897 117 70 2 37 150 102 216 2.79e-12 68.6

Find 203 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATATTGCCTTCCCTTTA+TGG 0.058863 2_4:-33958897 Msa0325850:three_prime_UTR
TCACTTGTGGAATTCAAATT+AGG 0.110801 2_4:-33962522 Msa0325850:CDS
AACAAAGCTTTACCATATTT+TGG 0.130985 2_4:+33964079 None:intergenic
GCTACTGTTCTATATCATTT+TGG 0.186245 2_4:-33964694 Msa0325850:five_prime_UTR
TTCACCACACAACCGTTCTT+AGG 0.215577 2_4:+33963263 None:intergenic
TTTGATTGGTGGGTTGAAAA+TGG 0.232105 2_4:-33964428 Msa0325850:exon
TTCTTGTCTCCTCTCTGAAT+TGG 0.239341 2_4:-33964801 Msa0325850:five_prime_UTR
TAGGAGGGTTTGTAATATAT+TGG 0.239424 2_4:-33964477 Msa0325850:five_prime_UTR
TAATTTCTCTTAGTTGAAAA+AGG 0.249599 2_4:+33963504 None:intergenic
TCGAACAAGCGAAACTTTCT+TGG 0.255608 2_4:-33962803 Msa0325850:CDS
CAACAATGCTGAGGAGAATA+TGG 0.273348 2_4:-33962715 Msa0325850:CDS
TTCCCTTTATGGTTAGGTTT+AGG 0.280429 2_4:-33958886 Msa0325850:three_prime_UTR
GGCGATTAATGAATGCAATT+TGG 0.285660 2_4:-33964116 Msa0325850:CDS
GGAGAAACAAGTGAGGAAAA+TGG 0.297609 2_4:-33964385 Msa0325850:CDS
TGATCGTCCTCAGCCTTATT+TGG 0.310717 2_4:+33963716 None:intergenic
AACTGTGAGTGTTGTGAATT+AGG 0.312403 2_4:-33964496 Msa0325850:five_prime_UTR
TGCGATTGCTTAGGTGTTCC+AGG 0.312676 2_4:-33959000 Msa0325850:three_prime_UTR
CAGCTCTAGCATTGTTCAAT+TGG 0.314408 2_4:-33963028 Msa0325850:CDS
TTCTTGAAAACCTTTGTGTT+TGG 0.315697 2_4:-33964609 Msa0325850:five_prime_UTR
CACTTGTGGAATTCAAATTA+GGG 0.324137 2_4:-33962521 Msa0325850:CDS
CTTGAAGTTACTCCAAAATA+TGG 0.326606 2_4:-33964091 Msa0325850:CDS
GCTGAGGAGAATATGGAAAA+AGG 0.329603 2_4:-33962708 Msa0325850:CDS
AATCCTAAACCTAACCATAA+AGG 0.332901 2_4:+33958883 None:intergenic
TCATAGAATGGATCGTGATT+AGG 0.339265 2_4:+33963332 None:intergenic
AGAAGAAACAAATCCTGATT+TGG 0.339778 2_4:-33964768 Msa0325850:five_prime_UTR
ATTGCCTTCCCTTTATGGTT+AGG 0.341348 2_4:-33958892 Msa0325850:three_prime_UTR
TCTTGTCTCCTCTCTGAATT+GGG 0.342104 2_4:-33964800 Msa0325850:five_prime_UTR
GGACAACATTGCACCAAATA+AGG 0.342512 2_4:-33963729 Msa0325850:CDS
GAGTTTGCGAGTTCCTTTAC+AGG 0.346302 2_4:-33958970 Msa0325850:three_prime_UTR
TATGATGACAATAGCAATTC+AGG 0.360186 2_4:+33962085 None:intergenic
TTATGAGGCTTTGAATAGAT+TGG 0.361909 2_4:-33964041 Msa0325850:CDS
AGGAGTTTCATCCTTTCGTT+TGG 0.362101 2_4:-33962230 Msa0325850:CDS
TTGATTGGTGGGTTGAAAAT+GGG 0.363196 2_4:-33964427 Msa0325850:exon
TACGAAGGCTTTCTTGCTCT+TGG 0.363383 2_4:-33962837 Msa0325850:CDS
TACTTAGACTTTCATGAACT+TGG 0.364355 2_4:-33963146 Msa0325850:CDS
TTTCATTCATTTCAAATTCT+GGG 0.369069 2_4:-33964878 Msa0325850:five_prime_UTR
CTCGCAAACTCCTACATTCC+TGG 0.371435 2_4:+33958982 None:intergenic
TACCTCCTGCCATGTCAAAT+AGG 0.379171 2_4:+33963066 None:intergenic
AGCTCTAGCATTGTTCAATT+GGG 0.381899 2_4:-33963027 Msa0325850:CDS
TGAGAGAAAGGTTCAAACTT+TGG 0.382368 2_4:+33964923 None:intergenic
TAACATGTCTTGTTCTTGTT+GGG 0.393983 2_4:-33964973 Msa0325850:five_prime_UTR
AAATTAAAAGTTCGTATGAA+TGG 0.399777 2_4:-33962926 Msa0325850:CDS
CATACCCATCTCTCCAAATC+AGG 0.403940 2_4:+33964755 None:intergenic
ACAAGAACTGCTCCAAGGCT+TGG 0.406799 2_4:+33963467 None:intergenic
ATGGGTATGTTTCTGTTCAA+TGG 0.407131 2_4:-33964741 Msa0325850:five_prime_UTR
TAAGCAGAAAGAGGATGTTA+AGG 0.407983 2_4:-33963636 Msa0325850:CDS
CTCAGTGAAGCCTCCACTAC+CGG 0.408622 2_4:-33962651 Msa0325850:CDS
TCTTTAAATTAAAATTAGAT+TGG 0.411652 2_4:+33958719 None:intergenic
GAATTGAAGTGGGCTGAAAC+AGG 0.411735 2_4:-33963395 Msa0325850:CDS
ATAACATGTCTTGTTCTTGT+TGG 0.412806 2_4:-33964974 Msa0325850:five_prime_UTR
TGCGAGTTCCTTTACAGGTT+GGG 0.413560 2_4:-33958965 Msa0325850:three_prime_UTR
TCCAACGCCATGATATTATT+CGG 0.416082 2_4:+33963977 None:intergenic
TCAAATAACACTGCTGTAGA+TGG 0.416089 2_4:-33962399 Msa0325850:intron
TGATGTGGAAAAGGTTGAAA+TGG 0.417154 2_4:-33963294 Msa0325850:CDS
ATCCTAAACCTAACCATAAA+GGG 0.418696 2_4:+33958884 None:intergenic
TATAAGATGGGCTCAATTGC+CGG 0.418935 2_4:-33963537 Msa0325850:CDS
GAAAGCGCTCAAATTGCTTC+CGG 0.424125 2_4:-33964218 Msa0325850:CDS
GAGAAACAAGTGAGGAAAAT+GGG 0.424347 2_4:-33964384 Msa0325850:CDS
TCACCACACAACCGTTCTTA+GGG 0.427681 2_4:+33963264 None:intergenic
ACCCGTATGGCATGAATCAT+TGG 0.428713 2_4:-33962496 Msa0325850:CDS
TAGTGTGTTTACTATTTGAT+TGG 0.436721 2_4:-33964442 Msa0325850:five_prime_UTR
TTCAACATTCAAATCTGAGT+TGG 0.438805 2_4:-33964828 Msa0325850:five_prime_UTR
AACATTACAGCTACATCTGT+TGG 0.438941 2_4:+33962435 None:intergenic
TCTTCAACAACTTGAAGAAA+AGG 0.439480 2_4:+33962144 None:intergenic
GACACATCTATATGATTTCC+CGG 0.441015 2_4:+33964199 None:intergenic
AAAGCGCTCAAATTGCTTCC+GGG 0.441561 2_4:-33964217 Msa0325850:CDS
TCAACATTCAAATCTGAGTT+GGG 0.441633 2_4:-33964827 Msa0325850:five_prime_UTR
TGTGACAGGTTCCCAAGCCT+TGG 0.443112 2_4:-33963479 Msa0325850:CDS
GCTCATCTTGTGTTGAGGAT+TGG 0.446370 2_4:-33963223 Msa0325850:CDS
TGTAATATATTGGATTGGAT+TGG 0.449113 2_4:-33964467 Msa0325850:five_prime_UTR
TAAGAGAAATTATTTGTGAC+AGG 0.451847 2_4:-33963493 Msa0325850:CDS
ATGCTAGAGCTGTCATCTCT+TGG 0.452894 2_4:+33963039 None:intergenic
AATTAAAAGTTCGTATGAAT+GGG 0.453467 2_4:-33962925 Msa0325850:CDS
AGACGAAGTTTCTCATAGAA+TGG 0.453833 2_4:+33963320 None:intergenic
GTGTTTACTATTTGATTGGT+GGG 0.454079 2_4:-33964438 Msa0325850:five_prime_UTR
CAAGAACTGCTCCAAGGCTT+GGG 0.454815 2_4:+33963468 None:intergenic
AAAGATGGTTCAACATAATC+CGG 0.460718 2_4:+33963881 None:intergenic
GAGTTTATACAGAAAACATT+GGG 0.465864 2_4:-33958855 Msa0325850:three_prime_UTR
CGATACTCTTCTTCTGAACA+AGG 0.468671 2_4:+33962204 None:intergenic
CTTCTCTTCTAGTTTCTCCT+CGG 0.470200 2_4:+33963760 None:intergenic
CTTAGGTGTTCCAGGAATGT+AGG 0.471872 2_4:-33958992 Msa0325850:three_prime_UTR
TGCTATATGCAGATGGGACT+TGG 0.472267 2_4:-33964151 Msa0325850:CDS
ATCAGATGAAACTGCAGCGC+TGG 0.475338 2_4:-33962601 Msa0325850:CDS
GTCGTATGTGCGGAGTAATA+TGG 0.475460 2_4:-33964179 Msa0325850:CDS
TCTATCTTCCCAACCTGTAA+AGG 0.476322 2_4:+33958957 None:intergenic
CAAATCCTGATTTGGAGAGA+TGG 0.476951 2_4:-33964760 Msa0325850:five_prime_UTR
TCTTTGCATTGCGATTGCTT+AGG 0.482391 2_4:-33959009 Msa0325850:three_prime_UTR
CAGAAAGAATATGCAAAAGC+TGG 0.482907 2_4:-33962900 Msa0325850:CDS
GGGGAAATGTGCATATGTCT+AGG 0.483385 2_4:-33963007 Msa0325850:CDS
AAAAGTGCACTTGAAGATAG+AGG 0.485144 2_4:-33963938 Msa0325850:CDS
GTCACAGATAAATCTCTTGT+GGG 0.488756 2_4:-33962565 Msa0325850:CDS
TAAGCCATCCAGCCCGGTAG+TGG 0.488867 2_4:+33962638 None:intergenic
GAAACTAGAAGAGAAGAAAG+AGG 0.489348 2_4:-33963753 Msa0325850:CDS
TGGGACTTGGTGAGTACCCT+AGG 0.490644 2_4:-33964138 Msa0325850:CDS
GGAATCTGAAGTGTGAGAAA+TGG 0.490983 2_4:+33964944 None:intergenic
TCGGAAGGCACGTCAAAAGA+TGG 0.491701 2_4:+33963866 None:intergenic
TGTGTTTACTATTTGATTGG+TGG 0.492962 2_4:-33964439 Msa0325850:five_prime_UTR
GGTTGTCTTGTGTATGCAAA+AGG 0.494341 2_4:-33964577 Msa0325850:five_prime_UTR
GAATTGCTATTGTCATCATA+AGG 0.495158 2_4:-33962082 Msa0325850:intron
GAAGAGAGCGAGGTGTTATG+AGG 0.496712 2_4:-33964056 Msa0325850:CDS
CAAAATTGATGAAATAGTAC+AGG 0.497762 2_4:-33962290 Msa0325850:CDS
TACTTTGTTGTTTATTGCCA+CGG 0.500099 2_4:-33964314 Msa0325850:CDS
TATCATGGCGTTGGAGATCT+CGG 0.501474 2_4:-33963969 Msa0325850:CDS
GGTGAGAAATTATGAGAGAA+AGG 0.501768 2_4:+33964911 None:intergenic
GTGGGCTGAAACAGGATCAC+AGG 0.502534 2_4:-33963387 Msa0325850:CDS
TGAGTTTATACAGAAAACAT+TGG 0.506867 2_4:-33958856 Msa0325850:three_prime_UTR
TTCCAATGATTCATGCCATA+CGG 0.509759 2_4:+33962494 None:intergenic
GGCGTTGGAGATCTCGGATA+AGG 0.510091 2_4:-33963963 Msa0325850:CDS
AAATCCTGATTTGGAGAGAT+GGG 0.510228 2_4:-33964759 Msa0325850:five_prime_UTR
GCCTCCACTACCGGGCTGGA+TGG 0.511042 2_4:-33962642 Msa0325850:CDS
TGAAGCCTCCACTACCGGGC+TGG 0.511196 2_4:-33962646 Msa0325850:CDS
GTAATAAGATGTTTCAAAAG+AGG 0.513730 2_4:-33964270 Msa0325850:CDS
GCCGAATAATATCATGGCGT+TGG 0.518149 2_4:-33963978 Msa0325850:CDS
GGGTTTGTAATATATTGGAT+TGG 0.519970 2_4:-33964472 Msa0325850:five_prime_UTR
TCGTCTGAATGATGTGGAAA+AGG 0.524502 2_4:-33963303 Msa0325850:CDS
ACTTAGACTTTCATGAACTT+GGG 0.525905 2_4:-33963145 Msa0325850:CDS
TCAAATTAGGGCTACCCGTA+TGG 0.527716 2_4:-33962509 Msa0325850:CDS
TCCAATGATTCATGCCATAC+GGG 0.528365 2_4:+33962495 None:intergenic
GAGGGATCTTCGAGGAGCTA+TGG 0.528661 2_4:-33964251 Msa0325850:CDS
GGTTGGGAAGATAGAGATGC+AGG 0.530174 2_4:-33958949 Msa0325850:three_prime_UTR
ATTGAGAAGTTTGAACATGC+AGG 0.538923 2_4:-33962465 Msa0325850:CDS
TTGCATTCATTAATCGCCCT+AGG 0.542158 2_4:+33964121 None:intergenic
TTGCGAGTTCCTTTACAGGT+TGG 0.543117 2_4:-33958966 Msa0325850:three_prime_UTR
GCCATCCAGCCCGGTAGTGG+AGG 0.546360 2_4:+33962641 None:intergenic
CAGCGCTGGCGGCAAACATG+AGG 0.547135 2_4:-33962587 Msa0325850:CDS
TGATTGGTGGGTTGAAAATG+GGG 0.547276 2_4:-33964426 Msa0325850:exon
TTGCTTCTCTACAATTTCAT+CGG 0.549240 2_4:+33963784 None:intergenic
TAATAAGATGTTTCAAAAGA+GGG 0.549709 2_4:-33964269 Msa0325850:CDS
GGGAAATGTGCATATGTCTA+GGG 0.549993 2_4:-33963006 Msa0325850:CDS
GCTCAAGAGTTGAAGGAAGA+AGG 0.551067 2_4:-33964292 Msa0325850:CDS
GAAACTCTATTCAGAGGCTG+TGG 0.552027 2_4:-33963120 Msa0325850:CDS
TGCCACGGCTCAAGAGTTGA+AGG 0.552666 2_4:-33964299 Msa0325850:CDS
TGTTAGCTCATCTTGTGTTG+AGG 0.554112 2_4:-33963228 Msa0325850:CDS
TTTAAATAAGCCATCCAGCC+CGG 0.555273 2_4:+33962632 None:intergenic
TGAGAAAATTGAGTTGCCTC+CGG 0.555411 2_4:-33963900 Msa0325850:CDS
TTCCTTCAACTCTTGAGCCG+TGG 0.557472 2_4:+33964297 None:intergenic
GAAGCAACCTATGTGAGTGC+TGG 0.559835 2_4:+33962112 None:intergenic
AGATGAAACTGCAGCGCTGG+CGG 0.562325 2_4:-33962598 Msa0325850:CDS
GTAGTAATAGAAAAGAAGAA+AGG 0.563258 2_4:-33959049 Msa0325850:three_prime_UTR
GTGAGTGTTGTGAATTAGGA+GGG 0.575212 2_4:-33964492 Msa0325850:five_prime_UTR
CAAGGCCTATTTGACATGGC+AGG 0.577875 2_4:-33963071 Msa0325850:CDS
GGTCACAGATAAATCTCTTG+TGG 0.578048 2_4:-33962566 Msa0325850:CDS
TCAGTGAAGCCTCCACTACC+GGG 0.582496 2_4:-33962650 Msa0325850:CDS
TTGATGAAATAGTACAGGCA+TGG 0.582822 2_4:-33962285 Msa0325850:CDS
CATAGAGCCAGCACTCACAT+AGG 0.587070 2_4:-33962119 Msa0325850:three_prime_UTR
ATCTTCGAGGAGCTATGGTA+AGG 0.587773 2_4:-33964246 Msa0325850:CDS
GATGGAGCCGAATAATATCA+TGG 0.587956 2_4:-33963984 Msa0325850:CDS
CACCACACAACCGTTCTTAG+GGG 0.590340 2_4:+33963265 None:intergenic
GCTCTAGCATTGTTCAATTG+GGG 0.591057 2_4:-33963026 Msa0325850:CDS
TGCATTCATTAATCGCCCTA+GGG 0.591150 2_4:+33964122 None:intergenic
ATGGATAATGCCCCTAAGAA+CGG 0.591410 2_4:-33963275 Msa0325850:CDS
CTTCGGATGAAGAATTGAAG+TGG 0.591646 2_4:-33963406 Msa0325850:CDS
GGCTGCGTGCTATATGCAGA+TGG 0.591996 2_4:-33964158 Msa0325850:CDS
AAGTTCAATAATCTAGTACA+AGG 0.593733 2_4:+33958743 None:intergenic
GAACAAGGGTTCCAAACGAA+AGG 0.595231 2_4:+33962219 None:intergenic
GCAGAAAGAGGATGTTAAGG+AGG 0.597588 2_4:-33963633 Msa0325850:CDS
TTTCAAAAGAGGGATCTTCG+AGG 0.598758 2_4:-33964259 Msa0325850:CDS
ACCTCTGTGGAGGGCCATGT+CGG 0.600718 2_4:+33962750 None:intergenic
CTCATACAAGCTCAAAGGCA+TGG 0.603320 2_4:+33962173 None:intergenic
CAGCAGTGTTATTTGAACAG+TGG 0.607319 2_4:+33962406 None:intergenic
ATGAAAGTCTAAGTATCTGT+CGG 0.614655 2_4:+33963154 None:intergenic
ATTTGACAAGAACTGCTCCA+AGG 0.619046 2_4:+33963462 None:intergenic
GTCAAATATAGAGATCAAGA+AGG 0.619076 2_4:-33963446 Msa0325850:CDS
TTCGGATGAAGAATTGAAGT+GGG 0.621321 2_4:-33963405 Msa0325850:CDS
TCATCTTTACAACAATGCTG+AGG 0.623420 2_4:-33962724 Msa0325850:CDS
TGTGAGTGTTGTGAATTAGG+AGG 0.623584 2_4:-33964493 Msa0325850:five_prime_UTR
AAAGTGCACTTGAAGATAGA+GGG 0.624772 2_4:-33963937 Msa0325850:CDS
AGCAACTCATACAAGCTCAA+AGG 0.626181 2_4:+33962168 None:intergenic
ACTCAACAAGTAGTTTACAA+TGG 0.626456 2_4:+33958787 None:intergenic
TAAACCTAACCATAAAGGGA+AGG 0.628411 2_4:+33958888 None:intergenic
TCTGAAGTGTGAGAAATGGA+AGG 0.629088 2_4:+33964948 None:intergenic
ATGTGCATATGTCTAGGGCA+AGG 0.630423 2_4:-33963001 Msa0325850:CDS
GCTGCGTGCTATATGCAGAT+GGG 0.637013 2_4:-33964157 Msa0325850:CDS
AATGGATAAATTACAGAACA+AGG 0.638185 2_4:+33958805 None:intergenic
ATATAGATGTGTCGTATGTG+CGG 0.638921 2_4:-33964189 Msa0325850:CDS
TAGCTTCTACTATATACAGT+CGG 0.639708 2_4:+33963357 None:intergenic
CGGTTGTGTGGTGAAATCAA+AGG 0.641172 2_4:-33963255 Msa0325850:CDS
CATTGCACCAAATAAGGCTG+AGG 0.641965 2_4:-33963723 Msa0325850:CDS
TGGGATGAAACTCTATTCAG+AGG 0.642522 2_4:-33963126 Msa0325850:CDS
GAAACTTCGTCTGAATGATG+TGG 0.644851 2_4:-33963309 Msa0325850:CDS
AAGATGAAGAACCTCTGTGG+AGG 0.649172 2_4:+33962740 None:intergenic
GGGACTTGGTGAGTACCCTA+GGG 0.649406 2_4:-33964137 Msa0325850:CDS
GGCCTATTTGACATGGCAGG+AGG 0.649810 2_4:-33963068 Msa0325850:CDS
TGACTTGATCACAATCACTT+CGG 0.649854 2_4:-33963423 Msa0325850:CDS
ACTAGAAGAGAAGAAAGAGG+AGG 0.651831 2_4:-33963750 Msa0325850:CDS
GATACTCTTCTTCTGAACAA+GGG 0.652197 2_4:+33962205 None:intergenic
AGCACAAGGCCTATTTGACA+TGG 0.652886 2_4:-33963075 Msa0325850:CDS
AGATGAAGAACCTCTGTGGA+GGG 0.653251 2_4:+33962741 None:intergenic
GCTGTATGAACGCTCACTTG+TGG 0.653961 2_4:-33962535 Msa0325850:CDS
AAGCTTTGTTGAAGAGAGCG+AGG 0.655766 2_4:-33964066 Msa0325850:CDS
GTATCATTATCATACGCAGT+CGG 0.658396 2_4:+33964334 None:intergenic
TGGGCTGAAACAGGATCACA+GGG 0.676880 2_4:-33963386 Msa0325850:CDS
AATTGTAGAGAAGCAAGCCG+AGG 0.677261 2_4:-33963777 Msa0325850:CDS
AATGGGAATCATAGTAACGA+CGG 0.678439 2_4:-33964367 Msa0325850:CDS
GCAAGTAGGAGAAACAAGTG+AGG 0.679397 2_4:-33964392 Msa0325850:CDS
TGCCCCTAAGAACGGTTGTG+TGG 0.685586 2_4:-33963267 Msa0325850:CDS
TCACAGATAAATCTCTTGTG+GGG 0.699010 2_4:-33962564 Msa0325850:CDS
GATGGTTCAACATAATCCGG+AGG 0.699395 2_4:+33963884 None:intergenic
GTAATATAGATTTACCGACA+TGG 0.713914 2_4:-33962764 Msa0325850:CDS
ACCGACATGGCCCTCCACAG+AGG 0.742103 2_4:-33962751 Msa0325850:CDS
ACACAAATCCCAATTCAGAG+AGG 0.744527 2_4:+33964792 None:intergenic
GTTACAAGTGAAGAAGCACA+AGG 0.747985 2_4:-33963089 Msa0325850:CDS
GTAAAGATGAAGAACCTCTG+TGG 0.749593 2_4:+33962737 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATCTTTAGTTAAAAAAA+AGG - chr2_4:33964147-33964166 Msa0325850:CDS 10.0%
!! ATATCTTTAGTTAAAAAAAA+GGG - chr2_4:33964148-33964167 Msa0325850:CDS 10.0%
!! TCTTTAAATTAAAATTAGAT+TGG + chr2_4:33965051-33965070 None:intergenic 10.0%
!!! TAATTTTAATTTAAAGAAAC+TGG - chr2_4:33965054-33965073 Msa0325850:five_prime_UTR 10.0%
!!! AAAATCTGACTTAATTTTAA+TGG + chr2_4:33960910-33960929 None:intergenic 15.0%
!! AATATATTAGCATTTCAATT+AGG + chr2_4:33962355-33962374 None:intergenic 15.0%
!!! ATTGAAATGCTAATATATTT+TGG - chr2_4:33962356-33962375 Msa0325850:intron 15.0%
!!! TTTTTTGTTCAAATCTATTT+AGG - chr2_4:33962383-33962402 Msa0325850:intron 15.0%
!! TAGATGATTAAATAACAAAT+GGG - chr2_4:33963180-33963199 Msa0325850:CDS 15.0%
!! AAAAAAAAAAAAAAAGAGGT+AGG - chr2_4:33963276-33963295 Msa0325850:CDS 15.0%
!!! ATTTTATTTTTTTTGTGAAC+AGG + chr2_4:33963487-33963506 None:intergenic 15.0%
!!! GTATAGTTTGTATTATAATT+TGG - chr2_4:33963813-33963832 Msa0325850:CDS 15.0%
!! TTAATTATAACTTAAGTGTT+CGG - chr2_4:33963851-33963870 Msa0325850:CDS 15.0%
!! TAAAGATATATTTCAATTGA+GGG + chr2_4:33964137-33964156 None:intergenic 15.0%
!! AATGAATGAAAAACTTATCT+GGG + chr2_4:33958880-33958899 None:intergenic 20.0%
!! AAATGAATGAAAAACTTATC+TGG + chr2_4:33958881-33958900 None:intergenic 20.0%
!!! TTTTCATTCATTTCAAATTC+TGG - chr2_4:33958888-33958907 Msa0325850:three_prime_UTR 20.0%
!! TTTCATTCATTTCAAATTCT+GGG - chr2_4:33958889-33958908 Msa0325850:three_prime_UTR 20.0%
!! TAATAAGATGTTTCAAAAGA+GGG - chr2_4:33959498-33959517 Msa0325850:intron 20.0%
!! TAATTTCTCTTAGTTGAAAA+AGG + chr2_4:33960266-33960285 None:intergenic 20.0%
!! AAATTAAAAGTTCGTATGAA+TGG - chr2_4:33960841-33960860 Msa0325850:intron 20.0%
!! AATTAAAAGTTCGTATGAAT+GGG - chr2_4:33960842-33960861 Msa0325850:intron 20.0%
!! AATATCTAAATTGAGCAATT+TGG - chr2_4:33962230-33962249 Msa0325850:CDS 20.0%
!! TATTTAGGAAAAATTAGAAG+AGG - chr2_4:33962398-33962417 Msa0325850:intron 20.0%
!!! TTTCTGGTATCAATATATTT+TGG + chr2_4:33962859-33962878 None:intergenic 20.0%
!! ATATATTGATACCAGAAATA+AGG - chr2_4:33962861-33962880 Msa0325850:CDS 20.0%
!! GTAGATGATTAAATAACAAA+TGG - chr2_4:33963179-33963198 Msa0325850:CDS 20.0%
!! AGATGATTAAATAACAAATG+GGG - chr2_4:33963181-33963200 Msa0325850:CDS 20.0%
!! TTGATATACAAGAATTGTAA+TGG + chr2_4:33963366-33963385 None:intergenic 20.0%
!!! GAATTTTCAATTGAATCAAT+AGG - chr2_4:33963674-33963693 Msa0325850:CDS 20.0%
!! AGTTTGTATTATAATTTGGT+TGG - chr2_4:33963817-33963836 Msa0325850:CDS 20.0%
!! AAACAACTTATTGAAAACAA+GGG - chr2_4:33963953-33963972 Msa0325850:CDS 20.0%
!!! ATTGGTGTTCTTAAATTTAA+GGG + chr2_4:33964105-33964124 None:intergenic 20.0%
!! CTAAAGATATATTTCAATTG+AGG + chr2_4:33964138-33964157 None:intergenic 20.0%
!!! TTTTAGCAACACAATTTTAA+AGG + chr2_4:33964391-33964410 None:intergenic 20.0%
!!! TAAAATTGTGTTGCTAAAAT+TGG - chr2_4:33964392-33964411 Msa0325850:CDS 20.0%
!!! ACGACATTATTTAATTTACA+AGG - chr2_4:33964425-33964444 Msa0325850:exon 20.0%
!!! TTTTAGTCCTTAAAATTGTT+AGG + chr2_4:33964497-33964516 None:intergenic 20.0%
!!! ATTTTATGAACAAAATCCAA+CGG + chr2_4:33964622-33964641 None:intergenic 20.0%
!! ATATTGTTCTCTTTCTTTTG+TGG - chr2_4:33958726-33958745 Msa0325850:three_prime_UTR 25.0%
!! TTTTCTTGTATACAACTTTG+AGG - chr2_4:33959102-33959121 Msa0325850:intron 25.0%
! CAATAAAAAACCAAACACAA+AGG + chr2_4:33959171-33959190 None:intergenic 25.0%
!!! CTTTGTGTTTGGTTTTTTAT+TGG - chr2_4:33959169-33959188 Msa0325850:intron 25.0%
!! TGTAATATATTGGATTGGAT+TGG - chr2_4:33959300-33959319 Msa0325850:intron 25.0%
! TAGTGTGTTTACTATTTGAT+TGG - chr2_4:33959325-33959344 Msa0325850:intron 25.0%
! GTAATAAGATGTTTCAAAAG+AGG - chr2_4:33959497-33959516 Msa0325850:intron 25.0%
!! AACAAAGCTTTACCATATTT+TGG + chr2_4:33959691-33959710 None:intergenic 25.0%
! AAAAATTGATAAGCAGAAAG+AGG - chr2_4:33960122-33960141 Msa0325850:intron 25.0%
! GTCAATGAAGAAAAAAGTAA+TGG - chr2_4:33960156-33960175 Msa0325850:intron 25.0%
!!! AAAACAGCAAAACTTGTTTT+TGG - chr2_4:33960201-33960220 Msa0325850:intron 25.0%
!!! TTTTTGGTGATGATATAAGA+TGG - chr2_4:33960217-33960236 Msa0325850:intron 25.0%
!!! TTTTGGTGATGATATAAGAT+GGG - chr2_4:33960218-33960237 Msa0325850:intron 25.0%
! TAAGAGAAATTATTTGTGAC+AGG - chr2_4:33960274-33960293 Msa0325850:intron 25.0%
!! ATTAAGTCAGATTTTTACGA+AGG - chr2_4:33960915-33960934 Msa0325850:intron 25.0%
!!! TTTCATCAATTTTGAAACCT+AGG + chr2_4:33961471-33961490 None:intergenic 25.0%
! CAAAATTGATGAAATAGTAC+AGG - chr2_4:33961477-33961496 Msa0325850:intron 25.0%
! TATATACTGAAGTCCTTATT+GGG + chr2_4:33961938-33961957 None:intergenic 25.0%
! AACAGAATACTATATTCACA+AGG - chr2_4:33962055-33962074 Msa0325850:intron 25.0%
! AATGCTAATGTCAATAACAT+AGG - chr2_4:33962150-33962169 Msa0325850:three_prime_UTR 25.0%
! TTATATGTGTGCATATGTAT+CGG + chr2_4:33962179-33962198 None:intergenic 25.0%
! AGAAATGTCTATGATAGTAA+TGG + chr2_4:33962427-33962446 None:intergenic 25.0%
!!! CTGTTTTTAACTATACATCA+AGG + chr2_4:33962569-33962588 None:intergenic 25.0%
! AGTTGTAATTTGAGAATTTG+AGG - chr2_4:33962611-33962630 Msa0325850:CDS 25.0%
! GTTGTAATTTGAGAATTTGA+GGG - chr2_4:33962612-33962631 Msa0325850:CDS 25.0%
! TTGTAATTTGAGAATTTGAG+GGG - chr2_4:33962613-33962632 Msa0325850:CDS 25.0%
!!! ATATATTTTGGTTCCTATCA+AGG + chr2_4:33962847-33962866 None:intergenic 25.0%
!! GCTATATTATTCCTTATTTC+TGG + chr2_4:33962875-33962894 None:intergenic 25.0%
! TTATTATAATGTTAGACCCA+CGG + chr2_4:33963155-33963174 None:intergenic 25.0%
!!! TTGACTTGGATAAACTTTAT+TGG - chr2_4:33963412-33963431 Msa0325850:CDS 25.0%
! AGTTATACTTATTGTATCGA+AGG + chr2_4:33963573-33963592 None:intergenic 25.0%
! ACAATAAGTATAACTTCCTT+TGG - chr2_4:33963578-33963597 Msa0325850:CDS 25.0%
! TTTCTAACTAATCTTCATAG+TGG + chr2_4:33963775-33963794 None:intergenic 25.0%
! GAAACAACTTATTGAAAACA+AGG - chr2_4:33963952-33963971 Msa0325850:CDS 25.0%
! AACAACTTATTGAAAACAAG+GGG - chr2_4:33963954-33963973 Msa0325850:CDS 25.0%
! CATATATTCAAATCATATGC+AGG + chr2_4:33964067-33964086 None:intergenic 25.0%
!! GATTGGTGTTCTTAAATTTA+AGG + chr2_4:33964106-33964125 None:intergenic 25.0%
! AGGCTATTTAAATCATATTC+AGG + chr2_4:33964342-33964361 None:intergenic 25.0%
! ATATGATTTAAATAGCCTCT+TGG - chr2_4:33964344-33964363 Msa0325850:CDS 25.0%
! GTAGTAATAGAAAAGAAGAA+AGG - chr2_4:33964718-33964737 Msa0325850:five_prime_UTR 25.0%
! TGAGTTTATACAGAAAACAT+TGG - chr2_4:33964911-33964930 Msa0325850:five_prime_UTR 25.0%
! GAGTTTATACAGAAAACATT+GGG - chr2_4:33964912-33964931 Msa0325850:five_prime_UTR 25.0%
! AATGGATAAATTACAGAACA+AGG + chr2_4:33964965-33964984 None:intergenic 25.0%
! AAGTTCAATAATCTAGTACA+AGG + chr2_4:33965027-33965046 None:intergenic 25.0%
! ATAACATGTCTTGTTCTTGT+TGG - chr2_4:33958793-33958812 Msa0325850:three_prime_UTR 30.0%
! TAACATGTCTTGTTCTTGTT+GGG - chr2_4:33958794-33958813 Msa0325850:three_prime_UTR 30.0%
TTCAACATTCAAATCTGAGT+TGG - chr2_4:33958939-33958958 Msa0325850:three_prime_UTR 30.0%
TCAACATTCAAATCTGAGTT+GGG - chr2_4:33958940-33958959 Msa0325850:three_prime_UTR 30.0%
AGAAGAAACAAATCCTGATT+TGG - chr2_4:33958999-33959018 Msa0325850:three_prime_UTR 30.0%
! GCTACTGTTCTATATCATTT+TGG - chr2_4:33959073-33959092 Msa0325850:three_prime_UTR 30.0%
TTCTTGAAAACCTTTGTGTT+TGG - chr2_4:33959158-33959177 Msa0325850:intron 30.0%
TAGGAGGGTTTGTAATATAT+TGG - chr2_4:33959290-33959309 Msa0325850:intron 30.0%
GGGTTTGTAATATATTGGAT+TGG - chr2_4:33959295-33959314 Msa0325850:intron 30.0%
TGTGTTTACTATTTGATTGG+TGG - chr2_4:33959328-33959347 Msa0325850:intron 30.0%
GTGTTTACTATTTGATTGGT+GGG - chr2_4:33959329-33959348 Msa0325850:intron 30.0%
!! TACTTTGTTGTTTATTGCCA+CGG - chr2_4:33959453-33959472 Msa0325850:intron 30.0%
CTTGAAGTTACTCCAAAATA+TGG - chr2_4:33959676-33959695 Msa0325850:intron 30.0%
!! TTATGAGGCTTTGAATAGAT+TGG - chr2_4:33959726-33959745 Msa0325850:intron 30.0%
AAAGATGGTTCAACATAATC+CGG + chr2_4:33959889-33959908 None:intergenic 30.0%
GAAAAAGAGCAAAAAAGAGA+AGG - chr2_4:33959951-33959970 Msa0325850:intron 30.0%
TTGCTTCTCTACAATTTCAT+CGG + chr2_4:33959986-33960005 None:intergenic 30.0%
GCGTAATAAATCGAAAAAGA+AGG - chr2_4:33960089-33960108 Msa0325850:intron 30.0%
!!! CTGCTTATCAATTTTTTCCT+TGG + chr2_4:33960118-33960137 None:intergenic 30.0%
!!! ACAAGTTTTGCTGTTTTCTT+AGG + chr2_4:33960198-33960217 None:intergenic 30.0%
GTCAAATATAGAGATCAAGA+AGG - chr2_4:33960321-33960340 Msa0325850:intron 30.0%
TAGCTTCTACTATATACAGT+CGG + chr2_4:33960413-33960432 None:intergenic 30.0%
AACTGTTCAAAAATCACGTT+GGG - chr2_4:33960583-33960602 Msa0325850:intron 30.0%
ATGAAAGTCTAAGTATCTGT+CGG + chr2_4:33960616-33960635 None:intergenic 30.0%
TACTTAGACTTTCATGAACT+TGG - chr2_4:33960621-33960640 Msa0325850:intron 30.0%
ACTTAGACTTTCATGAACTT+GGG - chr2_4:33960622-33960641 Msa0325850:intron 30.0%
GTAATATAGATTTACCGACA+TGG - chr2_4:33961003-33961022 Msa0325850:intron 30.0%
TCACTTGTGGAATTCAAATT+AGG - chr2_4:33961245-33961264 Msa0325850:intron 30.0%
CACTTGTGGAATTCAAATTA+GGG - chr2_4:33961246-33961265 Msa0325850:intron 30.0%
ATACTAACACTTCTTCTAAC+AGG - chr2_4:33961445-33961464 Msa0325850:intron 30.0%
TCTTCAACAACTTGAAGAAA+AGG + chr2_4:33961626-33961645 None:intergenic 30.0%
TATGATGACAATAGCAATTC+AGG + chr2_4:33961685-33961704 None:intergenic 30.0%
! GAATTGCTATTGTCATCATA+AGG - chr2_4:33961685-33961704 Msa0325850:intron 30.0%
ACTTTCAGAGAAGCAAATAA+CGG + chr2_4:33961746-33961765 None:intergenic 30.0%
AGCTGTATTGTGTAGAATAT+TGG - chr2_4:33961889-33961908 Msa0325850:intron 30.0%
AGCAAATGAAATTCCCAATA+AGG - chr2_4:33961922-33961941 Msa0325850:intron 30.0%
CTATATACTGAAGTCCTTAT+TGG + chr2_4:33961939-33961958 None:intergenic 30.0%
TATTAGAACACCCATTAAGA+GGG - chr2_4:33962007-33962026 Msa0325850:intron 30.0%
GTTATTGACATTAGCATTGT+CGG + chr2_4:33962148-33962167 None:intergenic 30.0%
TGTAATTTGAGAATTTGAGG+GGG - chr2_4:33962614-33962633 Msa0325850:CDS 30.0%
AAATTATATGACAGGAACCA+TGG - chr2_4:33962678-33962697 Msa0325850:CDS 30.0%
GGATTTCAAAGTTTCCATAT+TGG - chr2_4:33962731-33962750 Msa0325850:CDS 30.0%
CTTTACATTGCAGTAAAATG+AGG + chr2_4:33962785-33962804 None:intergenic 30.0%
! CTCATTTTACTGCAATGTAA+AGG - chr2_4:33962783-33962802 Msa0325850:CDS 30.0%
!!! AAGGTTTTAAATTGTGGTTG+TGG + chr2_4:33962828-33962847 None:intergenic 30.0%
!!! CCTATCAAGGTTTTAAATTG+TGG + chr2_4:33962834-33962853 None:intergenic 30.0%
! CCACAATTTAAAACCTTGAT+AGG - chr2_4:33962831-33962850 Msa0325850:CDS 30.0%
!! TCGTTGTTTTCTGTTTAAGA+GGG + chr2_4:33962924-33962943 None:intergenic 30.0%
!! ATCGTTGTTTTCTGTTTAAG+AGG + chr2_4:33962925-33962944 None:intergenic 30.0%
ACGATAAAAGTGAAGAAAAC+AGG - chr2_4:33962940-33962959 Msa0325850:CDS 30.0%
! GGTTATAATGGAAGTTGAAA+GGG + chr2_4:33963036-33963055 None:intergenic 30.0%
! TGGTTATAATGGAAGTTGAA+AGG + chr2_4:33963037-33963056 None:intergenic 30.0%
GGTTAGTATGATGGTTATAA+TGG + chr2_4:33963048-33963067 None:intergenic 30.0%
! TAGACTATTGGTTAGTATGA+TGG + chr2_4:33963057-33963076 None:intergenic 30.0%
ACAAGAGAGAACTAAATGAT+GGG + chr2_4:33963091-33963110 None:intergenic 30.0%
TAAATAACAAATGGGGAGTT+AGG - chr2_4:33963188-33963207 Msa0325850:CDS 30.0%
AAATAACAAATGGGGAGTTA+GGG - chr2_4:33963189-33963208 Msa0325850:CDS 30.0%
AATAGAAAACAAGTCTCACA+CGG + chr2_4:33963326-33963345 None:intergenic 30.0%
GATTCTAATGGAACTAGATA+AGG + chr2_4:33963448-33963467 None:intergenic 30.0%
TGATTACACCACAAGAAATT+TGG - chr2_4:33963518-33963537 Msa0325850:CDS 30.0%
AATTGAATCAATAGGAGTCA+TGG - chr2_4:33963682-33963701 Msa0325850:CDS 30.0%
ATAAGCTGGAAACAACTTAT+GGG + chr2_4:33963904-33963923 None:intergenic 30.0%
AATAAGCTGGAAACAACTTA+TGG + chr2_4:33963905-33963924 None:intergenic 30.0%
CTTATTTCAATGTGCTCTTT+AGG - chr2_4:33963919-33963938 Msa0325850:CDS 30.0%
AAGGGGATATATGATTAGAT+TGG - chr2_4:33963971-33963990 Msa0325850:CDS 30.0%
! TATGATTAGATTGGTAGTTG+AGG - chr2_4:33963980-33963999 Msa0325850:CDS 30.0%
AGTTAATAAATGGAGTGGTA+TGG - chr2_4:33964009-33964028 Msa0325850:CDS 30.0%
AATTGAGGGACTAAATTGAT+TGG + chr2_4:33964123-33964142 None:intergenic 30.0%
AATGTTCACTAAAGAGATTG+GGG + chr2_4:33964300-33964319 None:intergenic 30.0%
GAATGTTCACTAAAGAGATT+GGG + chr2_4:33964301-33964320 None:intergenic 30.0%
TGAATGTTCACTAAAGAGAT+TGG + chr2_4:33964302-33964321 None:intergenic 30.0%
! ATTGCTAATTTGCAGATTTG+AGG - chr2_4:33964455-33964474 Msa0325850:five_prime_UTR 30.0%
! TTGCTAATTTGCAGATTTGA+GGG - chr2_4:33964456-33964475 Msa0325850:five_prime_UTR 30.0%
GTCCTTAAAATTGTTAGGAT+CGG + chr2_4:33964492-33964511 None:intergenic 30.0%
!!! AAATGCTGATTTGCTCATTT+TGG - chr2_4:33964514-33964533 Msa0325850:five_prime_UTR 30.0%
GATGTCACACAAATATTCAT+TGG + chr2_4:33964549-33964568 None:intergenic 30.0%
! ATGATATTAGCTTATTCCGT+TGG - chr2_4:33964603-33964622 Msa0325850:five_prime_UTR 30.0%
! TCTTTGTTATGTTATTCTGC+AGG - chr2_4:33964652-33964671 Msa0325850:five_prime_UTR 30.0%
!!! AGGTTTGTTTTGCTATTTTC+TGG - chr2_4:33964672-33964691 Msa0325850:five_prime_UTR 30.0%
!!! GGTTTGTTTTGCTATTTTCT+GGG - chr2_4:33964673-33964692 Msa0325850:five_prime_UTR 30.0%
ATCCTAAACCTAACCATAAA+GGG + chr2_4:33964886-33964905 None:intergenic 30.0%
AATCCTAAACCTAACCATAA+AGG + chr2_4:33964887-33964906 None:intergenic 30.0%
ACTCAACAAGTAGTTTACAA+TGG + chr2_4:33964983-33965002 None:intergenic 30.0%
TGAGAGAAAGGTTCAAACTT+TGG + chr2_4:33958847-33958866 None:intergenic 35.0%
GGTGAGAAATTATGAGAGAA+AGG + chr2_4:33958859-33958878 None:intergenic 35.0%
!! AAATCCTGATTTGGAGAGAT+GGG - chr2_4:33959008-33959027 Msa0325850:three_prime_UTR 35.0%
! ATGGGTATGTTTCTGTTCAA+TGG - chr2_4:33959026-33959045 Msa0325850:three_prime_UTR 35.0%
! AACTGTGAGTGTTGTGAATT+AGG - chr2_4:33959271-33959290 Msa0325850:intron 35.0%
!! TTTGATTGGTGGGTTGAAAA+TGG - chr2_4:33959339-33959358 Msa0325850:intron 35.0%
!! TTGATTGGTGGGTTGAAAAT+GGG - chr2_4:33959340-33959359 Msa0325850:intron 35.0%
GAGAAACAAGTGAGGAAAAT+GGG - chr2_4:33959383-33959402 Msa0325850:intron 35.0%
AATGGGAATCATAGTAACGA+CGG - chr2_4:33959400-33959419 Msa0325850:intron 35.0%
GTATCATTATCATACGCAGT+CGG + chr2_4:33959436-33959455 None:intergenic 35.0%
GACACATCTATATGATTTCC+CGG + chr2_4:33959571-33959590 None:intergenic 35.0%
ATATAGATGTGTCGTATGTG+CGG - chr2_4:33959578-33959597 Msa0325850:intron 35.0%
GGCGATTAATGAATGCAATT+TGG - chr2_4:33959651-33959670 Msa0325850:intron 35.0%
!!! TGTTAGTGCTGTTTTGAAGA+TGG - chr2_4:33959765-33959784 Msa0325850:intron 35.0%
TCCAACGCCATGATATTATT+CGG + chr2_4:33959793-33959812 None:intergenic 35.0%
! AAAAGTGCACTTGAAGATAG+AGG - chr2_4:33959829-33959848 Msa0325850:intron 35.0%
AAAGTGCACTTGAAGATAGA+GGG - chr2_4:33959830-33959849 Msa0325850:intron 35.0%
! CTTTTCTTTCACTGCCTTTT+CGG + chr2_4:33959923-33959942 None:intergenic 35.0%
GAAACTAGAAGAGAAGAAAG+AGG - chr2_4:33960014-33960033 Msa0325850:intron 35.0%
TAAGCAGAAAGAGGATGTTA+AGG - chr2_4:33960131-33960150 Msa0325850:intron 35.0%
TGAAAAAGGCTGCAATTAAC+CGG + chr2_4:33960252-33960271 None:intergenic 35.0%
TGACTTGATCACAATCACTT+CGG - chr2_4:33960344-33960363 Msa0325850:intron 35.0%
TTCGGATGAAGAATTGAAGT+GGG - chr2_4:33960362-33960381 Msa0325850:intron 35.0%
TCATAGAATGGATCGTGATT+AGG + chr2_4:33960438-33960457 None:intergenic 35.0%
AGACGAAGTTTCTCATAGAA+TGG + chr2_4:33960450-33960469 None:intergenic 35.0%
TGATGTGGAAAAGGTTGAAA+TGG - chr2_4:33960473-33960492 Msa0325850:intron 35.0%
GAACTGTTCAAAAATCACGT+TGG - chr2_4:33960582-33960601 Msa0325850:intron 35.0%
! AGCTCTAGCATTGTTCAATT+GGG - chr2_4:33960740-33960759 Msa0325850:intron 35.0%
CAGAAAGAATATGCAAAAGC+TGG - chr2_4:33960867-33960886 Msa0325850:intron 35.0%
TCATCTTTACAACAATGCTG+AGG - chr2_4:33961043-33961062 Msa0325850:intron 35.0%
TGGAAAAAGGAATGCTGATA+TGG - chr2_4:33961072-33961091 Msa0325850:intron 35.0%
GGAAAAAGGAATGCTGATAT+GGG - chr2_4:33961073-33961092 Msa0325850:intron 35.0%
GTCACAGATAAATCTCTTGT+GGG - chr2_4:33961202-33961221 Msa0325850:intron 35.0%
TCACAGATAAATCTCTTGTG+GGG - chr2_4:33961203-33961222 Msa0325850:intron 35.0%
TTCCAATGATTCATGCCATA+CGG + chr2_4:33961276-33961295 None:intergenic 35.0%
ATTGAGAAGTTTGAACATGC+AGG - chr2_4:33961302-33961321 Msa0325850:intron 35.0%
AACATTACAGCTACATCTGT+TGG + chr2_4:33961335-33961354 None:intergenic 35.0%
TCAAATAACACTGCTGTAGA+TGG - chr2_4:33961368-33961387 Msa0325850:intron 35.0%
TTGATGAAATAGTACAGGCA+TGG - chr2_4:33961482-33961501 Msa0325850:intron 35.0%
GAAGCTAAAAAGTTGCAGAA+AGG - chr2_4:33961517-33961536 Msa0325850:intron 35.0%
GATACTCTTCTTCTGAACAA+GGG + chr2_4:33961565-33961584 None:intergenic 35.0%
CTTTCAGAGAAGCAAATAAC+GGG + chr2_4:33961745-33961764 None:intergenic 35.0%
! AGCATTAGTCTACGTGATTA+TGG - chr2_4:33961957-33961976 Msa0325850:intron 35.0%
TCTACGTGATTATGGAAAGT+TGG - chr2_4:33961965-33961984 Msa0325850:intron 35.0%
CTATTAGAACACCCATTAAG+AGG - chr2_4:33962006-33962025 Msa0325850:intron 35.0%
CTGTTTCAAACCCTCTTAAT+GGG + chr2_4:33962020-33962039 None:intergenic 35.0%
! TTTGAGACACTTGTTTGAGT+TGG - chr2_4:33962499-33962518 Msa0325850:CDS 35.0%
AAACAGTTACTGTGTCAAGT+AGG - chr2_4:33962583-33962602 Msa0325850:CDS 35.0%
GTAATTTGAGAATTTGAGGG+GGG - chr2_4:33962615-33962634 Msa0325850:CDS 35.0%
!!! GGAACCATGGTTTTAAATTG+AGG - chr2_4:33962691-33962710 Msa0325850:CDS 35.0%
! CAGACCTCAATTTAAAACCA+TGG + chr2_4:33962698-33962717 None:intergenic 35.0%
!! AACTTTGAAATCCGCAATTG+CGG + chr2_4:33962724-33962743 None:intergenic 35.0%
TGCAGTAAAATGAGGAAATG+CGG + chr2_4:33962777-33962796 None:intergenic 35.0%
TGTGGTTACACTTTACACTA+TGG + chr2_4:33962810-33962829 None:intergenic 35.0%
!! GGATATTTTGGAAAAGGCAT+GGG + chr2_4:33962997-33963016 None:intergenic 35.0%
!! GGTAAGGGATATTTTGGAAA+AGG + chr2_4:33963003-33963022 None:intergenic 35.0%
CACAAGAGAGAACTAAATGA+TGG + chr2_4:33963092-33963111 None:intergenic 35.0%
!!! GAGACACTTTTGATTTCAGA+CGG - chr2_4:33963211-33963230 Msa0325850:CDS 35.0%
! TTTTTCTCTTTCTGACAAGC+AGG + chr2_4:33963254-33963273 None:intergenic 35.0%
AAAAAGAGGTAGGAGAATCT+AGG - chr2_4:33963286-33963305 Msa0325850:CDS 35.0%
ATAGAAAACAAGTCTCACAC+GGG + chr2_4:33963325-33963344 None:intergenic 35.0%
CACTACTAAGTTATAGAGTG+AGG - chr2_4:33963388-33963407 Msa0325850:CDS 35.0%
TTATAGAGTGAGGTTTGACT+TGG - chr2_4:33963398-33963417 Msa0325850:CDS 35.0%
TTCCATTAGAATCCCTTTAG+AGG - chr2_4:33963455-33963474 Msa0325850:CDS 35.0%
AACAGGAAAACACCTCTAAA+GGG + chr2_4:33963470-33963489 None:intergenic 35.0%
AATCCATTAACTCGATCCAA+AGG + chr2_4:33963597-33963616 None:intergenic 35.0%
!! TTAATGGATTTCATTGCCCT+AGG - chr2_4:33963607-33963626 Msa0325850:CDS 35.0%
CATGCACAATAATTGACCTA+GGG + chr2_4:33963626-33963645 None:intergenic 35.0%
ACATGCACAATAATTGACCT+AGG + chr2_4:33963627-33963646 None:intergenic 35.0%
GCACACTGAATTAATGGAAA+TGG - chr2_4:33963706-33963725 Msa0325850:CDS 35.0%
! AAGAGCACATTGAAATAAGC+TGG + chr2_4:33963918-33963937 None:intergenic 35.0%
GAGGTGAGAGAGTTAATAAA+TGG - chr2_4:33963999-33964018 Msa0325850:CDS 35.0%
GAGAGAGTTAATAAATGGAG+TGG - chr2_4:33964004-33964023 Msa0325850:CDS 35.0%
AATAAATGGAGTGGTATGGA+AGG - chr2_4:33964013-33964032 Msa0325850:CDS 35.0%
ATATGCAGGTATTATGCAAG+GGG + chr2_4:33964053-33964072 None:intergenic 35.0%
CATATGCAGGTATTATGCAA+GGG + chr2_4:33964054-33964073 None:intergenic 35.0%
TCATATGCAGGTATTATGCA+AGG + chr2_4:33964055-33964074 None:intergenic 35.0%
ATGTTCACTAAAGAGATTGG+GGG + chr2_4:33964299-33964318 None:intergenic 35.0%
ACTAATCTTGATACACCAAG+AGG + chr2_4:33964362-33964381 None:intergenic 35.0%
! GACCGATCCTAACAATTTTA+AGG - chr2_4:33964487-33964506 Msa0325850:five_prime_UTR 35.0%
TAAACCTAACCATAAAGGGA+AGG + chr2_4:33964882-33964901 None:intergenic 35.0%
TTCCCTTTATGGTTAGGTTT+AGG - chr2_4:33964881-33964900 Msa0325850:five_prime_UTR 35.0%
! TCTGAAGTGTGAGAAATGGA+AGG + chr2_4:33958822-33958841 None:intergenic 40.0%
! GGAATCTGAAGTGTGAGAAA+TGG + chr2_4:33958826-33958845 None:intergenic 40.0%
TTCTTGTCTCCTCTCTGAAT+TGG - chr2_4:33958966-33958985 Msa0325850:three_prime_UTR 40.0%
TCTTGTCTCCTCTCTGAATT+GGG - chr2_4:33958967-33958986 Msa0325850:three_prime_UTR 40.0%
ACACAAATCCCAATTCAGAG+AGG + chr2_4:33958978-33958997 None:intergenic 40.0%
!! CAAATCCTGATTTGGAGAGA+TGG - chr2_4:33959007-33959026 Msa0325850:three_prime_UTR 40.0%
GGTTGTCTTGTGTATGCAAA+AGG - chr2_4:33959190-33959209 Msa0325850:intron 40.0%
! TGTGAGTGTTGTGAATTAGG+AGG - chr2_4:33959274-33959293 Msa0325850:intron 40.0%
! GTGAGTGTTGTGAATTAGGA+GGG - chr2_4:33959275-33959294 Msa0325850:intron 40.0%
!! TGATTGGTGGGTTGAAAATG+GGG - chr2_4:33959341-33959360 Msa0325850:intron 40.0%
GGGAAGAAAAAGAAGCAAGT+AGG - chr2_4:33959361-33959380 Msa0325850:intron 40.0%
GGAGAAACAAGTGAGGAAAA+TGG - chr2_4:33959382-33959401 Msa0325850:intron 40.0%
TTTCAAAAGAGGGATCTTCG+AGG - chr2_4:33959508-33959527 Msa0325850:intron 40.0%
TGCATTCATTAATCGCCCTA+GGG + chr2_4:33959648-33959667 None:intergenic 40.0%
TTGCATTCATTAATCGCCCT+AGG + chr2_4:33959649-33959668 None:intergenic 40.0%
GATGGAGCCGAATAATATCA+TGG - chr2_4:33959783-33959802 Msa0325850:intron 40.0%
! TGAGAAAATTGAGTTGCCTC+CGG - chr2_4:33959867-33959886 Msa0325850:intron 40.0%
GAGCAAAAAAGAGAAGGTGA+AGG - chr2_4:33959957-33959976 Msa0325850:intron 40.0%
!! CTTCTCTTCTAGTTTCTCCT+CGG + chr2_4:33960010-33960029 None:intergenic 40.0%
ACTAGAAGAGAAGAAAGAGG+AGG - chr2_4:33960017-33960036 Msa0325850:intron 40.0%
GGACAACATTGCACCAAATA+AGG - chr2_4:33960038-33960057 Msa0325850:intron 40.0%
! TATAAGATGGGCTCAATTGC+CGG - chr2_4:33960230-33960249 Msa0325850:intron 40.0%
ATTTGACAAGAACTGCTCCA+AGG + chr2_4:33960308-33960327 None:intergenic 40.0%
CTTCGGATGAAGAATTGAAG+TGG - chr2_4:33960361-33960380 Msa0325850:intron 40.0%
GAAACTTCGTCTGAATGATG+TGG - chr2_4:33960458-33960477 Msa0325850:intron 40.0%
TCGTCTGAATGATGTGGAAA+AGG - chr2_4:33960464-33960483 Msa0325850:intron 40.0%
ATGGATAATGCCCCTAAGAA+CGG - chr2_4:33960492-33960511 Msa0325850:intron 40.0%
TGTTAGCTCATCTTGTGTTG+AGG - chr2_4:33960539-33960558 Msa0325850:intron 40.0%
TGGGATGAAACTCTATTCAG+AGG - chr2_4:33960641-33960660 Msa0325850:intron 40.0%
! GTTACAAGTGAAGAAGCACA+AGG - chr2_4:33960678-33960697 Msa0325850:intron 40.0%
! CAGCTCTAGCATTGTTCAAT+TGG - chr2_4:33960739-33960758 Msa0325850:intron 40.0%
GCTCTAGCATTGTTCAATTG+GGG - chr2_4:33960741-33960760 Msa0325850:intron 40.0%
GGGAAATGTGCATATGTCTA+GGG - chr2_4:33960761-33960780 Msa0325850:intron 40.0%
TCGAACAAGCGAAACTTTCT+TGG - chr2_4:33960964-33960983 Msa0325850:intron 40.0%
GTAAAGATGAAGAACCTCTG+TGG + chr2_4:33961033-33961052 None:intergenic 40.0%
CAACAATGCTGAGGAGAATA+TGG - chr2_4:33961052-33961071 Msa0325850:intron 40.0%
GCTGAGGAGAATATGGAAAA+AGG - chr2_4:33961059-33961078 Msa0325850:intron 40.0%
TTTAAATAAGCCATCCAGCC+CGG + chr2_4:33961138-33961157 None:intergenic 40.0%
GGTCACAGATAAATCTCTTG+TGG - chr2_4:33961201-33961220 Msa0325850:intron 40.0%
TCCAATGATTCATGCCATAC+GGG + chr2_4:33961275-33961294 None:intergenic 40.0%
!! CAGCAGTGTTATTTGAACAG+TGG + chr2_4:33961364-33961383 None:intergenic 40.0%
AGGAGTTTCATCCTTTCGTT+TGG - chr2_4:33961537-33961556 Msa0325850:intron 40.0%
CGATACTCTTCTTCTGAACA+AGG + chr2_4:33961566-33961585 None:intergenic 40.0%
AGCAACTCATACAAGCTCAA+AGG + chr2_4:33961602-33961621 None:intergenic 40.0%
TCATGCACATAAACAAACGC+AGG + chr2_4:33961782-33961801 None:intergenic 40.0%
CCTGTTTCAAACCCTCTTAA+TGG + chr2_4:33962021-33962040 None:intergenic 40.0%
! CCATTAAGAGGGTTTGAAAC+AGG - chr2_4:33962018-33962037 Msa0325850:intron 40.0%
! TAAGAGGGTTTGAAACAGGA+AGG - chr2_4:33962022-33962041 Msa0325850:intron 40.0%
! AAGAGGGTTTGAAACAGGAA+GGG - chr2_4:33962023-33962042 Msa0325850:intron 40.0%
TGTCAGAGTCAGTGTTTCAT+AGG + chr2_4:33962093-33962112 None:intergenic 40.0%
!! ATGAAACACTGACTCTGACA+CGG - chr2_4:33962093-33962112 Msa0325850:three_prime_UTR 40.0%
GTTGTGACTGAAGAGTTCTA+AGG - chr2_4:33962449-33962468 Msa0325850:CDS 40.0%
!! AGAGTTCTAAGGTGTGTCTA+AGG - chr2_4:33962460-33962479 Msa0325850:CDS 40.0%
TTGGTAGACACGTGTCATAT+GGG - chr2_4:33962518-33962537 Msa0325850:CDS 40.0%
ATGCGGTCAAAATTGTGGTT+GGG + chr2_4:33962760-33962779 None:intergenic 40.0%
AATGCGGTCAAAATTGTGGT+TGG + chr2_4:33962761-33962780 None:intergenic 40.0%
AGGAAATGCGGTCAAAATTG+TGG + chr2_4:33962765-33962784 None:intergenic 40.0%
GCTCTGCTCTTTACAATTTG+AGG - chr2_4:33962893-33962912 Msa0325850:CDS 40.0%
ATGGGCAAGCATCATGTTTA+AGG + chr2_4:33962979-33962998 None:intergenic 40.0%
!! GGGATATTTTGGAAAAGGCA+TGG + chr2_4:33962998-33963017 None:intergenic 40.0%
! AGAGAACTAAATGATGGGAC+AGG + chr2_4:33963086-33963105 None:intergenic 40.0%
! TTGATTTCAGACGGATTCAG+CGG - chr2_4:33963220-33963239 Msa0325850:CDS 40.0%
! CACCTCTAAAGGGATTCTAA+TGG + chr2_4:33963460-33963479 None:intergenic 40.0%
GAACAGGAAAACACCTCTAA+AGG + chr2_4:33963471-33963490 None:intergenic 40.0%
CAGATCTGCCAAATTTCTTG+TGG + chr2_4:33963529-33963548 None:intergenic 40.0%
CTTCCTTTGGATCGAGTTAA+TGG - chr2_4:33963591-33963610 Msa0325850:CDS 40.0%
CATGGAGCACACTGAATTAA+TGG - chr2_4:33963700-33963719 Msa0325850:CDS 40.0%
!! GTGCTCTTTAGGATAGCTTA+TGG - chr2_4:33963930-33963949 Msa0325850:CDS 40.0%
TATGCAGGTATTATGCAAGG+GGG + chr2_4:33964052-33964071 None:intergenic 40.0%
AGTTAAAAAAAAGGGCAGCC+CGG - chr2_4:33964156-33964175 Msa0325850:CDS 40.0%
!!! AAGGGGTACCACCATTTTTT+GGG - chr2_4:33964211-33964230 Msa0325850:CDS 40.0%
CTACACAACCCAAAAAATGG+TGG + chr2_4:33964222-33964241 None:intergenic 40.0%
!!! CACCATTTTTTGGGTTGTGT+AGG - chr2_4:33964220-33964239 Msa0325850:CDS 40.0%
TGCCTACACAACCCAAAAAA+TGG + chr2_4:33964225-33964244 None:intergenic 40.0%
TCTTTGCATTGCGATTGCTT+AGG - chr2_4:33964758-33964777 Msa0325850:five_prime_UTR 40.0%
TCTATCTTCCCAACCTGTAA+AGG + chr2_4:33964813-33964832 None:intergenic 40.0%
CTCATATTGCCTTCCCTTTA+TGG - chr2_4:33964870-33964889 Msa0325850:five_prime_UTR 40.0%
ATTGCCTTCCCTTTATGGTT+AGG - chr2_4:33964875-33964894 Msa0325850:five_prime_UTR 40.0%
CATACCCATCTCTCCAAATC+AGG + chr2_4:33959015-33959034 None:intergenic 45.0%
GCAAGTAGGAGAAACAAGTG+AGG - chr2_4:33959375-33959394 Msa0325850:intron 45.0%
GCTCAAGAGTTGAAGGAAGA+AGG - chr2_4:33959475-33959494 Msa0325850:intron 45.0%
ATCTTCGAGGAGCTATGGTA+AGG - chr2_4:33959521-33959540 Msa0325850:intron 45.0%
!! GAAAGCGCTCAAATTGCTTC+CGG - chr2_4:33959549-33959568 Msa0325850:intron 45.0%
! AAAGCGCTCAAATTGCTTCC+GGG - chr2_4:33959550-33959569 Msa0325850:intron 45.0%
GTCGTATGTGCGGAGTAATA+TGG - chr2_4:33959588-33959607 Msa0325850:intron 45.0%
TGCTATATGCAGATGGGACT+TGG - chr2_4:33959616-33959635 Msa0325850:intron 45.0%
!! AAGCTTTGTTGAAGAGAGCG+AGG - chr2_4:33959701-33959720 Msa0325850:intron 45.0%
GCCGAATAATATCATGGCGT+TGG - chr2_4:33959789-33959808 Msa0325850:intron 45.0%
! TATCATGGCGTTGGAGATCT+CGG - chr2_4:33959798-33959817 Msa0325850:intron 45.0%
GATGGTTCAACATAATCCGG+AGG + chr2_4:33959886-33959905 None:intergenic 45.0%
! TTTTGACGTGCCTTCCGAAA+AGG - chr2_4:33959906-33959925 Msa0325850:intron 45.0%
! TCTTTCACTGCCTTTTCGGA+AGG + chr2_4:33959919-33959938 None:intergenic 45.0%
AATTGTAGAGAAGCAAGCCG+AGG - chr2_4:33959990-33960009 Msa0325850:intron 45.0%
CATTGCACCAAATAAGGCTG+AGG - chr2_4:33960044-33960063 Msa0325850:intron 45.0%
!! TGATCGTCCTCAGCCTTATT+TGG + chr2_4:33960054-33960073 None:intergenic 45.0%
ATCGAAAAAGAAGGCAGCCA+AGG - chr2_4:33960098-33960117 Msa0325850:intron 45.0%
GCAGAAAGAGGATGTTAAGG+AGG - chr2_4:33960134-33960153 Msa0325850:intron 45.0%
!! GAATTGAAGTGGGCTGAAAC+AGG - chr2_4:33960372-33960391 Msa0325850:intron 45.0%
TCACCACACAACCGTTCTTA+GGG + chr2_4:33960506-33960525 None:intergenic 45.0%
TTCACCACACAACCGTTCTT+AGG + chr2_4:33960507-33960526 None:intergenic 45.0%
CGGTTGTGTGGTGAAATCAA+AGG - chr2_4:33960512-33960531 Msa0325850:intron 45.0%
GCTCATCTTGTGTTGAGGAT+TGG - chr2_4:33960544-33960563 Msa0325850:intron 45.0%
GAAACTCTATTCAGAGGCTG+TGG - chr2_4:33960647-33960666 Msa0325850:intron 45.0%
AGCACAAGGCCTATTTGACA+TGG - chr2_4:33960692-33960711 Msa0325850:intron 45.0%
TACCTCCTGCCATGTCAAAT+AGG + chr2_4:33960704-33960723 None:intergenic 45.0%
ATGCTAGAGCTGTCATCTCT+TGG + chr2_4:33960731-33960750 None:intergenic 45.0%
GGGGAAATGTGCATATGTCT+AGG - chr2_4:33960760-33960779 Msa0325850:intron 45.0%
! ATGTGCATATGTCTAGGGCA+AGG - chr2_4:33960766-33960785 Msa0325850:intron 45.0%
TACGAAGGCTTTCTTGCTCT+TGG - chr2_4:33960930-33960949 Msa0325850:intron 45.0%
AGATGAAGAACCTCTGTGGA+GGG + chr2_4:33961029-33961048 None:intergenic 45.0%
AAGATGAAGAACCTCTGTGG+AGG + chr2_4:33961030-33961049 None:intergenic 45.0%
TCAAATTAGGGCTACCCGTA+TGG - chr2_4:33961258-33961277 Msa0325850:intron 45.0%
ACCCGTATGGCATGAATCAT+TGG - chr2_4:33961271-33961290 Msa0325850:intron 45.0%
ACACTTCTTCTAACAGGCCT+AGG - chr2_4:33961451-33961470 Msa0325850:intron 45.0%
GAACAAGGGTTCCAAACGAA+AGG + chr2_4:33961551-33961570 None:intergenic 45.0%
CTCATACAAGCTCAAAGGCA+TGG + chr2_4:33961597-33961616 None:intergenic 45.0%
! AGAGGGTTTGAAACAGGAAG+GGG - chr2_4:33962024-33962043 Msa0325850:intron 45.0%
TGACATTAGCATTGTCGGCA+TGG + chr2_4:33962143-33962162 None:intergenic 45.0%
! GTTGGTAGACACGTGTCATA+TGG - chr2_4:33962517-33962536 Msa0325850:CDS 45.0%
TTGTGGTTGGGACACCAATA+TGG + chr2_4:33962748-33962767 None:intergenic 45.0%
! GCAAGCATCATGTTTAAGGC+AGG + chr2_4:33962975-33962994 None:intergenic 45.0%
! GTGGAGGGTAAGGGATATTT+TGG + chr2_4:33963009-33963028 None:intergenic 45.0%
AGTTGAAAGGGCAAAGTGGA+GGG + chr2_4:33963024-33963043 None:intergenic 45.0%
AAGTTGAAAGGGCAAAGTGG+AGG + chr2_4:33963025-33963044 None:intergenic 45.0%
TGGAAGTTGAAAGGGCAAAG+TGG + chr2_4:33963028-33963047 None:intergenic 45.0%
! GAACTAAATGATGGGACAGG+TGG + chr2_4:33963083-33963102 None:intergenic 45.0%
ATGTTAGACCCACGGTTGTT+AGG + chr2_4:33963147-33963166 None:intergenic 45.0%
ATGCAGGTATTATGCAAGGG+GGG + chr2_4:33964051-33964070 None:intergenic 45.0%
!!! GAAGGGGTACCACCATTTTT+TGG - chr2_4:33964210-33964229 Msa0325850:CDS 45.0%
TGTTGTCACGTGACTGAACA+GGG + chr2_4:33964254-33964273 None:intergenic 45.0%
TTGTTGTCACGTGACTGAAC+AGG + chr2_4:33964255-33964274 None:intergenic 45.0%
CTTAGGTGTTCCAGGAATGT+AGG - chr2_4:33964775-33964794 Msa0325850:five_prime_UTR 45.0%
GAGTTTGCGAGTTCCTTTAC+AGG - chr2_4:33964797-33964816 Msa0325850:five_prime_UTR 45.0%
TTGCGAGTTCCTTTACAGGT+TGG - chr2_4:33964801-33964820 Msa0325850:five_prime_UTR 45.0%
TGCGAGTTCCTTTACAGGTT+GGG - chr2_4:33964802-33964821 Msa0325850:five_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAAAAAG+AGG - chr2_4:33963272-33963291 Msa0325850:CDS 5.0%
TTCCTTCAACTCTTGAGCCG+TGG + chr2_4:33959473-33959492 None:intergenic 50.0%
GCTGCGTGCTATATGCAGAT+GGG - chr2_4:33959610-33959629 Msa0325850:intron 50.0%
! GAAGAGAGCGAGGTGTTATG+AGG - chr2_4:33959711-33959730 Msa0325850:intron 50.0%
! TCGGAAGGCACGTCAAAAGA+TGG + chr2_4:33959904-33959923 None:intergenic 50.0%
CAAGAACTGCTCCAAGGCTT+GGG + chr2_4:33960302-33960321 None:intergenic 50.0%
ACAAGAACTGCTCCAAGGCT+TGG + chr2_4:33960303-33960322 None:intergenic 50.0%
TGGGCTGAAACAGGATCACA+GGG - chr2_4:33960381-33960400 Msa0325850:intron 50.0%
CACCACACAACCGTTCTTAG+GGG + chr2_4:33960505-33960524 None:intergenic 50.0%
CAAGGCCTATTTGACATGGC+AGG - chr2_4:33960696-33960715 Msa0325850:intron 50.0%
ATCAGATGAAACTGCAGCGC+TGG - chr2_4:33961166-33961185 Msa0325850:intron 50.0%
GCTGTATGAACGCTCACTTG+TGG - chr2_4:33961232-33961251 Msa0325850:intron 50.0%
CATAGAGCCAGCACTCACAT+AGG - chr2_4:33961648-33961667 Msa0325850:intron 50.0%
GAAGCAACCTATGTGAGTGC+TGG + chr2_4:33961658-33961677 None:intergenic 50.0%
! ACTGACTCTGACACGGATGT+CGG - chr2_4:33962100-33962119 Msa0325850:three_prime_UTR 50.0%
GACACGTGTCATATGGGTGT+CGG - chr2_4:33962524-33962543 Msa0325850:CDS 50.0%
!! TGTCATATGGGTGTCGGACA+CGG - chr2_4:33962530-33962549 Msa0325850:CDS 50.0%
TTGAGGGGGGCAAGAAAAAC+TGG - chr2_4:33962628-33962647 Msa0325850:CDS 50.0%
TGAGGGGGGCAAGAAAAACT+GGG - chr2_4:33962629-33962648 Msa0325850:CDS 50.0%
AAGGGCAAAGTGGAGGGTAA+GGG + chr2_4:33963018-33963037 None:intergenic 50.0%
AAAGGGCAAAGTGGAGGGTA+AGG + chr2_4:33963019-33963038 None:intergenic 50.0%
GACAGGTGGCAGTAGACTAT+TGG + chr2_4:33963069-33963088 None:intergenic 50.0%
ACGGTTGTTAGGAGCTACAG+GGG + chr2_4:33963136-33963155 None:intergenic 50.0%
CACGGTTGTTAGGAGCTACA+GGG + chr2_4:33963137-33963156 None:intergenic 50.0%
CTGTAGCTCCTAACAACCGT+GGG - chr2_4:33963136-33963155 Msa0325850:CDS 50.0%
TGCAGGTATTATGCAAGGGG+GGG + chr2_4:33964050-33964069 None:intergenic 50.0%
TTCCCAGACCTTGCGTATGT+GGG + chr2_4:33964193-33964212 None:intergenic 50.0%
ACATACGCAAGGTCTGGGAA+GGG - chr2_4:33964193-33964212 Msa0325850:CDS 50.0%
TCACGTGACTGAACAGGGTA+AGG + chr2_4:33964249-33964268 None:intergenic 50.0%
ACAACTTTACCGCTACGCCA+AGG - chr2_4:33964271-33964290 Msa0325850:CDS 50.0%
TAAAGAGATTGGGGGAGCCT+TGG + chr2_4:33964291-33964310 None:intergenic 50.0%
TGCGATTGCTTAGGTGTTCC+AGG - chr2_4:33964767-33964786 Msa0325850:five_prime_UTR 50.0%
CTCGCAAACTCCTACATTCC+TGG + chr2_4:33964788-33964807 None:intergenic 50.0%
GGTTGGGAAGATAGAGATGC+AGG - chr2_4:33964818-33964837 Msa0325850:five_prime_UTR 50.0%
TGCCACGGCTCAAGAGTTGA+AGG - chr2_4:33959468-33959487 Msa0325850:intron 55.0%
GAGGGATCTTCGAGGAGCTA+TGG - chr2_4:33959516-33959535 Msa0325850:intron 55.0%
GGCTGCGTGCTATATGCAGA+TGG - chr2_4:33959609-33959628 Msa0325850:intron 55.0%
!! TGGGACTTGGTGAGTACCCT+AGG - chr2_4:33959629-33959648 Msa0325850:intron 55.0%
!! GGGACTTGGTGAGTACCCTA+GGG - chr2_4:33959630-33959649 Msa0325850:intron 55.0%
! GGCGTTGGAGATCTCGGATA+AGG - chr2_4:33959804-33959823 Msa0325850:intron 55.0%
TGTGACAGGTTCCCAAGCCT+TGG - chr2_4:33960288-33960307 Msa0325850:intron 55.0%
! GTGGGCTGAAACAGGATCAC+AGG - chr2_4:33960380-33960399 Msa0325850:intron 55.0%
TGCCCCTAAGAACGGTTGTG+TGG - chr2_4:33960500-33960519 Msa0325850:intron 55.0%
GGCCTATTTGACATGGCAGG+AGG - chr2_4:33960699-33960718 Msa0325850:intron 55.0%
CTCAGTGAAGCCTCCACTAC+CGG - chr2_4:33961116-33961135 Msa0325850:intron 55.0%
TCAGTGAAGCCTCCACTACC+GGG - chr2_4:33961117-33961136 Msa0325850:intron 55.0%
! AGATGAAACTGCAGCGCTGG+CGG - chr2_4:33961169-33961188 Msa0325850:intron 55.0%
! GGGTTTGAAACAGGAAGGGG+AGG - chr2_4:33962027-33962046 Msa0325850:intron 55.0%
CGGTTGTTAGGAGCTACAGG+GGG + chr2_4:33963135-33963154 None:intergenic 55.0%
CCACGGTTGTTAGGAGCTAC+AGG + chr2_4:33963138-33963157 None:intergenic 55.0%
CCTGTAGCTCCTAACAACCG+TGG - chr2_4:33963135-33963154 Msa0325850:CDS 55.0%
! TATGTGGGAGCCTTGTGCAC+CGG + chr2_4:33964178-33964197 None:intergenic 55.0%
ACAAGGCTCCCACATACGCA+AGG - chr2_4:33964182-33964201 Msa0325850:CDS 55.0%
CTCCCACATACGCAAGGTCT+GGG - chr2_4:33964188-33964207 Msa0325850:CDS 55.0%
CTTCCCAGACCTTGCGTATG+TGG + chr2_4:33964194-33964213 None:intergenic 55.0%
CACATACGCAAGGTCTGGGA+AGG - chr2_4:33964192-33964211 Msa0325850:CDS 55.0%
CATACGCAAGGTCTGGGAAG+GGG - chr2_4:33964194-33964213 Msa0325850:CDS 55.0%
ACCTCTGTGGAGGGCCATGT+CGG + chr2_4:33961020-33961039 None:intergenic 60.0%
TAAGCCATCCAGCCCGGTAG+TGG + chr2_4:33961132-33961151 None:intergenic 60.0%
GAGGTCTGCAGCCGCAATTG+CGG - chr2_4:33962710-33962729 Msa0325850:CDS 60.0%
! ATGTGGGAGCCTTGTGCACC+GGG + chr2_4:33964177-33964196 None:intergenic 60.0%
GCTCCCACATACGCAAGGTC+TGG - chr2_4:33964187-33964206 Msa0325850:CDS 60.0%
ACCGACATGGCCCTCCACAG+AGG - chr2_4:33961016-33961035 Msa0325850:intron 65.0%
TGAAGCCTCCACTACCGGGC+TGG - chr2_4:33961121-33961140 Msa0325850:intron 65.0%
!! CAGCGCTGGCGGCAAACATG+AGG - chr2_4:33961180-33961199 Msa0325850:intron 65.0%
!! GGGTGTCGGACACGGAGACA+TGG - chr2_4:33962538-33962557 Msa0325850:CDS 65.0%
AAAGGGCAGCCCGGTGCACA+AGG - chr2_4:33964165-33964184 Msa0325850:CDS 65.0%
TTGGGGGAGCCTTGGCGTAG+CGG + chr2_4:33964283-33964302 None:intergenic 65.0%
! GCCTCCACTACCGGGCTGGA+TGG - chr2_4:33961125-33961144 Msa0325850:intron 70.0%
! GCCATCCAGCCCGGTAGTGG+AGG + chr2_4:33961129-33961148 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 33958672 33965117 33958672 ID=Msa0325850;Name=Msa0325850
chr2_4 mRNA 33958672 33965117 33958672 ID=Msa0325850-mRNA-1;Parent=Msa0325850;Name=Msa0325850-mRNA-1;_AED=0.05;_eAED=0.05;_QI=686|1|1|1|0.5|0.33|3|535|726
chr2_4 exon 33958672 33959115 33958672 ID=Msa0325850-mRNA-1:exon:10871;Parent=Msa0325850-mRNA-1
chr2_4 exon 33962083 33962322 33962083 ID=Msa0325850-mRNA-1:exon:10870;Parent=Msa0325850-mRNA-1
chr2_4 exon 33962400 33965117 33962400 ID=Msa0325850-mRNA-1:exon:10869;Parent=Msa0325850-mRNA-1
chr2_4 five_prime_UTR 33964432 33965117 33964432 ID=Msa0325850-mRNA-1:five_prime_utr;Parent=Msa0325850-mRNA-1
chr2_4 CDS 33962400 33964431 33962400 ID=Msa0325850-mRNA-1:cds;Parent=Msa0325850-mRNA-1
chr2_4 CDS 33962174 33962322 33962174 ID=Msa0325850-mRNA-1:cds;Parent=Msa0325850-mRNA-1
chr2_4 three_prime_UTR 33962083 33962173 33962083 ID=Msa0325850-mRNA-1:three_prime_utr;Parent=Msa0325850-mRNA-1
chr2_4 three_prime_UTR 33958672 33959115 33958672 ID=Msa0325850-mRNA-1:three_prime_utr;Parent=Msa0325850-mRNA-1
Gene Sequence

>Msa0325850

ATGGGGAAGAAAAAGAAGCAAGTAGGAGAAACAAGTGAGGAAAATGGGAATCATAGTAACGACGGTGATAAAAGTCCGACTGCGTATGATAATGATACTTTGTTGTTTATTGCCACGGCTCAAGAGTTGAAGGAAGAAGGTAATAAGATGTTTCAAAAGAGGGATCTTCGAGGAGCTATGGTAAGGTATGAGAAAGCGCTCAAATTGCTTCCGGGAAATCATATAGATGTGTCGTATGTGCGGAGTAATATGGCTGCGTGCTATATGCAGATGGGACTTGGTGAGTACCCTAGGGCGATTAATGAATGCAATTTGGCTCTTGAAGTTACTCCAAAATATGGTAAAGCTTTGTTGAAGAGAGCGAGGTGTTATGAGGCTTTGAATAGATTGGATTTAGCATTGAGAGATGTTAGTGCTGTTTTGAAGATGGAGCCGAATAATATCATGGCGTTGGAGATCTCGGATAAGGTGAAAAGTGCACTTGAAGATAGAGGGTTAAGAGTAAATGATGAGAAAATTGAGTTGCCTCCGGATTATGTTGAACCATCTTTTGACGTGCCTTCCGAAAAGGCAGTGAAAGAAAAGAAACACAAGAAAAAGAGCAAAAAAGAGAAGGTGAAGGCTTCCGATGAAATTGTAGAGAAGCAAGCCGAGGAGAAACTAGAAGAGAAGAAAGAGGAGGACAACATTGCACCAAATAAGGCTGAGGACGATCATCTCAAAGAGAAAAAGCGTAATAAATCGAAAAAGAAGGCAGCCAAGGAAAAAATTGATAAGCAGAAAGAGGATGTTAAGGAGGTCAATGAAGAAAAAAGTAATGGTAGAAGCGTAGATGTACCTAAGAAAACAGCAAAACTTGTTTTTGGTGATGATATAAGATGGGCTCAATTGCCGGTTAATTGCAGCCTTTTTCAACTAAGAGAAATTATTTGTGACAGGTTCCCAAGCCTTGGAGCAGTTCTTGTCAAATATAGAGATCAAGAAGGTGACTTGATCACAATCACTTCGGATGAAGAATTGAAGTGGGCTGAAACAGGATCACAGGGTTCTATCCGACTGTATATAGTAGAAGCTAATCCTAATCACGATCCATTCTATGAGAAACTTCGTCTGAATGATGTGGAAAAGGTTGAAATGGATAATGCCCCTAAGAACGGTTGTGTGGTGAAATCAAAGGAAATTGTTAGCTCATCTTGTGTTGAGGATTGGATAATTCAGTTCGCAGAACTGTTCAAAAATCACGTTGGGTTTGAATCCGACAGATACTTAGACTTTCATGAACTTGGGATGAAACTCTATTCAGAGGCTGTGGAAGAGACAGTTACAAGTGAAGAAGCACAAGGCCTATTTGACATGGCAGGAGGTAAGTTCCAAGAGATGACAGCTCTAGCATTGTTCAATTGGGGAAATGTGCATATGTCTAGGGCAAGGAAGAAAGTGTATTTAACTGAAGAAGATTCTTCTAGAGAGCATATGTATGAACAAATTAAAAGTTCGTATGAATGGGCGCAGAAAGAATATGCAAAAGCTGGAGAAAAATTTGAAGCAGCCATTAAAATTAAGTCAGATTTTTACGAAGGCTTTCTTGCTCTTGGTCAGCAACGATTCGAACAAGCGAAACTTTCTTGGTATTATGCACTCAGTAGTAATATAGATTTACCGACATGGCCCTCCACAGAGGTTCTTCATCTTTACAACAATGCTGAGGAGAATATGGAAAAAGGAATGCTGATATGGGAAGAATCGCAAGAGCAGCAGCTCAGTGAAGCCTCCACTACCGGGCTGGATGGCTTATTTAAAAATATGTCATCAGATGAAACTGCAGCGCTGGCGGCAAACATGAGGTCACAGATAAATCTCTTGTGGGGTACTATGCTGTATGAACGCTCACTTGTGGAATTCAAATTAGGGCTACCCGTATGGCATGAATCATTGGAAGCTGCGATTGAGAAGTTTGAACATGCAGGAGCTTCTCCAACAGATGTAGCTGTAATGTTGAAAAACCACTGTTCAAATAACACTGCTGTAGATGGCCTAGGTTTCAAAATTGATGAAATAGTACAGGCATGGAATGAGATGTATGAAGCTAAAAAGTTGCAGAAAGGAGTTTCATCCTTTCGTTTGGAACCCTTGTTCAGAAGAAGAGTATCGAAGATTTACCATGCCTTTGAGCTTGTATGA
Protein sequence

>Msa0325850

MGKKKKQVGETSEENGNHSNDGDKSPTAYDNDTLLFIATAQELKEEGNKMFQKRDLRGAMVRYEKALKLLPGNHIDVSYVRSNMAACYMQMGLGEYPRAINECNLALEVTPKYGKALLKRARCYEALNRLDLALRDVSAVLKMEPNNIMALEISDKVKSALEDRGLRVNDEKIELPPDYVEPSFDVPSEKAVKEKKHKKKSKKEKVKASDEIVEKQAEEKLEEKKEEDNIAPNKAEDDHLKEKKRNKSKKKAAKEKIDKQKEDVKEVNEEKSNGRSVDVPKKTAKLVFGDDIRWAQLPVNCSLFQLREIICDRFPSLGAVLVKYRDQEGDLITITSDEELKWAETGSQGSIRLYIVEANPNHDPFYEKLRLNDVEKVEMDNAPKNGCVVKSKEIVSSSCVEDWIIQFAELFKNHVGFESDRYLDFHELGMKLYSEAVEETVTSEEAQGLFDMAGGKFQEMTALALFNWGNVHMSRARKKVYLTEEDSSREHMYEQIKSSYEWAQKEYAKAGEKFEAAIKIKSDFYEGFLALGQQRFEQAKLSWYYALSSNIDLPTWPSTEVLHLYNNAEENMEKGMLIWEESQEQQLSEASTTGLDGLFKNMSSDETAALAANMRSQINLLWGTMLYERSLVEFKLGLPVWHESLEAAIEKFEHAGASPTDVAVMLKNHCSNNTAVDGLGFKIDEIVQAWNEMYEAKKLQKGVSSFRLEPLFRRRVSKIYHAFELV*