AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0584550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0584550 MtrunA17_Chr4g0024631 96.314 407 9 2 1 401 1 407 0.0 801
Msa0584550 MtrunA17_Chr2g0322591 77.094 406 84 3 1 401 1 402 0.0 648
Msa0584550 MtrunA17_Chr3g0115251 60.660 394 140 5 15 401 9 394 6.94e-172 485
Msa0584550 MtrunA17_Chr4g0004991 69.718 284 80 2 124 401 11 294 6.96e-151 428
Msa0584550 MtrunA17_Chr4g0017871 63.710 248 85 1 159 401 2 249 2.61e-124 359
Msa0584550 MtrunA17_Chr5g0396961 46.125 271 135 5 98 366 80 341 6.03e-75 236
Msa0584550 MtrunA17_Chr3g0126221 47.584 269 130 6 98 364 80 339 4.50e-74 234
Msa0584550 MtrunA17_Chr1g0149521 43.629 259 134 6 96 352 85 333 6.42e-62 203
Msa0584550 MtrunA17_Chr8g0360581 34.483 261 158 6 132 388 77 328 4.14e-45 159
Msa0584550 MtrunA17_Chr2g0316241 34.630 257 155 6 135 387 74 321 1.05e-44 157
Msa0584550 MtrunA17_Chr4g0017861 34.483 145 74 5 16 157 17 143 1.03e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0584550 AT1G05170.2 74.201 407 99 2 1 401 1 407 0.0 644
Msa0584550 AT2G32430.1 72.372 409 105 4 1 401 1 409 0.0 602
Msa0584550 AT4G26940.1 70.277 397 110 3 10 401 14 407 0.0 571
Msa0584550 AT1G05170.1 72.521 353 96 1 1 352 1 353 0.0 552
Msa0584550 AT1G11730.1 58.435 409 135 7 1 400 1 383 1.98e-171 484
Msa0584550 AT1G32930.1 58.065 403 154 6 6 401 5 399 1.37e-166 473
Msa0584550 AT1G77810.2 56.784 398 142 7 11 399 6 382 1.86e-159 454
Msa0584550 AT1G77810.1 56.359 401 142 8 11 399 6 385 3.28e-157 448
Msa0584550 AT1G33430.1 56.566 396 153 8 16 401 7 393 5.97e-148 425
Msa0584550 AT1G33430.2 55.446 404 153 9 16 401 7 401 8.26e-145 417
Msa0584550 AT1G22015.1 51.128 399 169 6 15 401 11 395 1.15e-138 402
Msa0584550 AT4G26940.2 63.838 271 94 2 10 279 14 281 3.01e-116 341
Msa0584550 AT1G33430.3 55.627 311 124 7 16 321 7 308 8.43e-104 310
Msa0584550 AT5G53340.1 45.353 269 136 6 98 364 76 335 7.46e-74 234
Msa0584550 AT5G53340.2 45.594 261 133 5 98 356 76 329 7.39e-73 231
Msa0584550 AT4G32120.1 45.560 259 128 7 96 352 85 332 6.68e-64 208
Msa0584550 AT2G25300.2 43.243 259 134 6 96 352 8 255 5.68e-63 203
Msa0584550 AT2G25300.1 43.701 254 128 6 101 352 93 333 3.77e-62 204
Msa0584550 AT2G26100.1 35.521 259 150 7 135 387 107 354 9.19e-46 162
Msa0584550 AT3G14960.1 32.422 256 160 6 135 386 81 327 3.25e-43 154
Msa0584550 AT1G53290.1 33.721 258 158 6 135 388 83 331 3.77e-43 154
Msa0584550 AT2G26100.2 35.931 231 138 5 135 360 107 332 7.92e-41 148

Find 119 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGGCTTGGTTTCTTTC+TGG 0.071661 4_2:+4176680 None:intergenic
CCTAATAAATTGATATAATT+TGG 0.146827 4_2:-4176397 Msa0584550:three_prime_UTR
CCAAATTATATCAATTTATT+AGG 0.169156 4_2:+4176397 None:intergenic
TCAATAGGAGCTTGGTTTAT+TGG 0.210268 4_2:-4177321 Msa0584550:CDS
TTGCCACTGCTGTGAGCTTA+TGG 0.241789 4_2:-4178033 Msa0584550:CDS
ACACATAAATAATCAATTAT+TGG 0.257213 4_2:+4176350 None:intergenic
CATTGGAAGTTTGGCGAGTC+TGG 0.279395 4_2:-4177547 Msa0584550:CDS
ACTTCAATATGCAAAATAAC+TGG 0.284348 4_2:+4180491 None:intergenic
GTATGCTATTTCCAATGATT+TGG 0.294141 4_2:-4177491 Msa0584550:CDS
TTTATGGAGTGCTTCTTTCT+AGG 0.298948 4_2:-4176752 Msa0584550:exon
GAGAAGGTGAAAATGCTTTA+TGG 0.301896 4_2:-4176768 Msa0584550:CDS
GAACCTGAGCATTGGAAGTT+TGG 0.307392 4_2:-4177556 Msa0584550:CDS
GGAACTATTAACAAACAAAA+TGG 0.326167 4_2:+4176439 None:intergenic
TGGAGTATTCCTGAACAAAA+TGG 0.340829 4_2:-4179341 Msa0584550:CDS
ATTGTCATGCGCTTTGTAAT+TGG 0.344864 4_2:-4178602 Msa0584550:CDS
TCCAATTTAGTTGCAAGATC+TGG 0.354620 4_2:-4179151 Msa0584550:intron
CTCCTGTTTCAGAAGATATA+AGG 0.357539 4_2:-4178889 Msa0584550:CDS
CTGGAATGCTCTTCACTAAC+AGG 0.360031 4_2:-4180336 Msa0584550:intron
TTGTCTTTGCTGACAATTCA+AGG 0.362315 4_2:+4178065 None:intergenic
TTTGTGTTGCTTCATTTGAT+TGG 0.363073 4_2:-4176849 Msa0584550:CDS
TGCCACTGCTGTGAGCTTAT+GGG 0.367282 4_2:-4178032 Msa0584550:CDS
GGTAATAATCTTCCTGAGTT+AGG 0.368466 4_2:+4176706 None:intergenic
ATATTTCTCTCTATATATAC+TGG 0.381326 4_2:+4176623 None:intergenic
TACATTGGATGCATGAAATC+TGG 0.384729 4_2:-4177691 Msa0584550:CDS
GTCCTTATATCTTCTGAAAC+AGG 0.385267 4_2:+4178887 None:intergenic
GGAAAAGAAGGGACTCGTTC+GGG 0.389542 4_2:-4178799 Msa0584550:CDS
ACTTCCAATGCTCAGGTTCA+TGG 0.389694 4_2:+4177560 None:intergenic
AGACCGACAGCTTCAGAAAC+TGG 0.394152 4_2:-4179311 Msa0584550:CDS
AAGGGACTCGTTCGGGCTAC+TGG 0.405098 4_2:-4178792 Msa0584550:CDS
TATGTATGTTGCCAAATCAT+TGG 0.411417 4_2:+4177480 None:intergenic
TCTATTCTTTGTTGCTTGAA+AGG 0.423223 4_2:-4176463 Msa0584550:three_prime_UTR
CTGCTTCAATAGCTCTATCT+AGG 0.425000 4_2:+4178292 None:intergenic
CTATTCTTTGTTGCTTGAAA+GGG 0.429201 4_2:-4176462 Msa0584550:three_prime_UTR
TAGAGAAAGAATGAAAATAG+TGG 0.439106 4_2:+4180579 None:intergenic
CTATGTGAGTTGTGTTGTGT+TGG 0.439564 4_2:+4180687 None:intergenic
AGGAAAAGAAGGGACTCGTT+CGG 0.441327 4_2:-4178800 Msa0584550:CDS
GTACATAGAAGGTGTGGAGA+AGG 0.442264 4_2:-4176784 Msa0584550:CDS
GGAGCTGCAGTGGAATTTGT+AGG 0.445573 4_2:-4176828 Msa0584550:CDS
TATGTATGGTGAAGATTTCA+AGG 0.447691 4_2:-4179106 Msa0584550:CDS
ATCTCTTCTTAAAATGTAGA+AGG 0.449785 4_2:+4176538 None:intergenic
TTAATACTGCCTTTAGCAGC+AGG 0.450178 4_2:-4178820 Msa0584550:CDS
GATGATGTTCATGTAAATAT+AGG 0.452270 4_2:-4177983 Msa0584550:intron
TTTATGCAGAATCATGTTGA+AGG 0.456059 4_2:-4178091 Msa0584550:intron
TCCTATTGACACATCCTCAT+TGG 0.456204 4_2:+4177335 None:intergenic
AATAATCAATTATTGGCAAA+AGG 0.465631 4_2:+4176357 None:intergenic
GGATTAAAGAAGTACATAGA+AGG 0.469286 4_2:-4176795 Msa0584550:CDS
GAATTTGTAGGTCCGCTGAT+AGG 0.469957 4_2:-4176816 Msa0584550:CDS
CCTTTAGCAGCAGGAAAAGA+AGG 0.471407 4_2:-4178811 Msa0584550:CDS
AAGTACTTCCGCCATGCCAC+AGG 0.472843 4_2:-4177520 Msa0584550:CDS
GGGCAAGAGAAAGTACCTTA+TGG 0.476193 4_2:-4178852 Msa0584550:CDS
TCATGGTTTGCAGCTAGATA+AGG 0.483793 4_2:-4176512 Msa0584550:three_prime_UTR
TATGTGAGTTGTGTTGTGTT+GGG 0.485451 4_2:+4180688 None:intergenic
ATAATTGATTATTTATGTGT+TGG 0.487550 4_2:-4176347 Msa0584550:three_prime_UTR
GCATGGAGATTTCTTGAGGC+TGG 0.488147 4_2:-4178259 Msa0584550:intron
TGTCTCGGTAGTTTCTGTGC+TGG 0.488168 4_2:-4180355 Msa0584550:CDS
TTCGGGCTACTGGTTGCCAC+AGG 0.489061 4_2:-4178782 Msa0584550:intron
CTGTGTTGAATGTAGAGCTT+TGG 0.492154 4_2:-4178984 Msa0584550:intron
TTGTTTGTTAATAGTTCCAA+TGG 0.493333 4_2:-4176434 Msa0584550:three_prime_UTR
CTTAAAATGTAGAAGGTCCA+TGG 0.495200 4_2:+4176545 None:intergenic
TCGCCAAACTTCCAATGCTC+AGG 0.496491 4_2:+4177553 None:intergenic
GCCAATGAGGATGTGTCAAT+AGG 0.497688 4_2:-4177336 Msa0584550:CDS
TTCAAATTTAGAGATGGACT+TGG 0.502922 4_2:-4178951 Msa0584550:CDS
AATAAATTGATATAATTTGG+TGG 0.503156 4_2:-4176394 Msa0584550:three_prime_UTR
GGAGCTTGATAGCTAGCCAT+TGG 0.506135 4_2:+4176418 None:intergenic
GAGTGCCACAGCAAAGTCTT+CGG 0.512041 4_2:+4177274 None:intergenic
GGCTTGGTTTCTTTCTGGAG+TGG 0.512180 4_2:+4176685 None:intergenic
TATTAATACCAACGACCATA+AGG 0.514517 4_2:+4178837 None:intergenic
GATGGACTTGGCTGCTGCGA+GGG 0.515443 4_2:-4178939 Msa0584550:CDS
TGTATCTTAGTAATTCCCCT+AGG 0.517860 4_2:-4176291 Msa0584550:three_prime_UTR
GACTATTTCAAATTTAGAGA+TGG 0.518519 4_2:-4178957 Msa0584550:CDS
TGCGAATGGAAGGCGCAAGC+AGG 0.529852 4_2:-4176877 Msa0584550:CDS
TAAATTGAATGTAGTTTCTG+AGG 0.533960 4_2:-4179288 Msa0584550:CDS
GTATCTTAGTAATTCCCCTA+GGG 0.535039 4_2:-4176290 Msa0584550:three_prime_UTR
TCAATTATTGGCAAAAGGAA+AGG 0.536443 4_2:+4176362 None:intergenic
TCAAAACAACGGATATACAT+TGG 0.538752 4_2:-4177706 Msa0584550:CDS
TATAAGGACGACTGAGTCGA+CGG 0.542612 4_2:-4178873 Msa0584550:CDS
TGATGAGTTCTTCCTAACTC+AGG 0.542722 4_2:-4176718 Msa0584550:three_prime_UTR
TTTGTTTGCAAGTATGGTAA+GGG 0.544501 4_2:+4180720 None:intergenic
TCATTTGATTGGAGCTGCAG+TGG 0.544715 4_2:-4176838 Msa0584550:CDS
CTTCAATATGCAAAATAACT+GGG 0.553629 4_2:+4180492 None:intergenic
AGGATGTGTCAATAGGAGCT+TGG 0.557584 4_2:-4177329 Msa0584550:CDS
GCATTGACATTTCTGATCGA+AGG 0.557611 4_2:-4176218 None:intergenic
CGCGAAACTAGAGATATGTA+TGG 0.560067 4_2:-4179120 Msa0584550:CDS
GATACCATGAACCTGAGCAT+TGG 0.565176 4_2:-4177564 Msa0584550:CDS
AAGAAACTAGAGGAAGAGAA+AGG 0.565582 4_2:-4178626 Msa0584550:CDS
AGAAAGTACCTTATGGTCGT+TGG 0.568823 4_2:-4178845 Msa0584550:CDS
TTACCAGTTTCTGAAGCTGT+CGG 0.571354 4_2:+4179308 None:intergenic
ATAGCATAAGATATAAGCTA+AGG 0.576272 4_2:-4180664 Msa0584550:five_prime_UTR
TTAACTAGTGCTACATCAGG+AGG 0.577145 4_2:-4178318 Msa0584550:intron
AAGAGAGAATGCTTGCTCCA+TGG 0.578870 4_2:-4176562 Msa0584550:three_prime_UTR
AGATAGAGCTATTGAAGCAG+AGG 0.580020 4_2:-4178289 Msa0584550:CDS
CATACAACTGCCCTGTGGCA+TGG 0.582197 4_2:+4177509 None:intergenic
AGTTGCAAGATCTGGAAATG+AGG 0.583436 4_2:-4179143 Msa0584550:CDS
CTTTAGCAGCAGGAAAAGAA+GGG 0.584908 4_2:-4178810 Msa0584550:CDS
AAAGAAGTACATAGAAGGTG+TGG 0.587665 4_2:-4176790 Msa0584550:CDS
GAAGCAGAGGACAGAAAGCA+TGG 0.588213 4_2:-4178276 Msa0584550:CDS
TACTTCTTTAATCCTATCAG+CGG 0.588432 4_2:+4176804 None:intergenic
ATAGTGGAGTTTGAGAAAGA+TGG 0.589743 4_2:+4180595 None:intergenic
GCAAGTATGGTAAGGGACGT+TGG 0.590601 4_2:+4180727 None:intergenic
AGTTAGGAAGAACTCATCAA+AGG 0.596741 4_2:+4176722 None:intergenic
AAATTGAATGTAGTTTCTGA+GGG 0.606560 4_2:-4179287 Msa0584550:CDS
ATCCCATAAGCTCACAGCAG+TGG 0.610258 4_2:+4178030 None:intergenic
GAAAGCATGGAGATTTCTTG+AGG 0.614966 4_2:-4178263 Msa0584550:CDS
TTGGTTTATTGGACTTGACG+TGG 0.621784 4_2:-4177310 Msa0584550:CDS
AGATGGACTTGGCTGCTGCG+AGG 0.622009 4_2:-4178940 Msa0584550:CDS
TGCGCTTTGTAATTGGACAC+AGG 0.622431 4_2:-4178595 Msa0584550:intron
TTAATGACGTGGAAAAGTAG+AGG 0.624708 4_2:-4180427 Msa0584550:CDS
ATAAGGACGACTGAGTCGAC+GGG 0.634555 4_2:-4178872 Msa0584550:CDS
AGTACTTCCGCCATGCCACA+GGG 0.639704 4_2:-4177519 Msa0584550:CDS
TCTTCATAAGTATGCCAATG+AGG 0.642056 4_2:-4177349 Msa0584550:CDS
TGACAAAAGAAAGAAACTAG+AGG 0.651999 4_2:-4178636 Msa0584550:CDS
GTGGAGTTTGAGAAAGATGG+TGG 0.652437 4_2:+4180598 None:intergenic
ATGTATGGTGAAGATTTCAA+GGG 0.663955 4_2:-4179105 Msa0584550:CDS
AAATTGTTACGAAGTAGAGT+CGG 0.664201 4_2:+4176257 None:intergenic
GTTCAAGAGTCAGTACGAAG+TGG 0.682952 4_2:-4178914 Msa0584550:CDS
TATCTTAGTAATTCCCCTAG+GGG 0.695288 4_2:-4176289 Msa0584550:three_prime_UTR
TTAGACACCGATCAAAACAA+CGG 0.706941 4_2:-4177717 Msa0584550:CDS
ACAACTGCCCTGTGGCATGG+CGG 0.712956 4_2:+4177512 None:intergenic
AATAGCATACAACTGCCCTG+TGG 0.772018 4_2:+4177504 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTAAAAAACTAATAG+AGG + chr4_2:4176332-4176351 None:intergenic 10.0%
!! CATACAAAAATAATAATAAT+TGG + chr4_2:4177932-4177951 None:intergenic 10.0%
!!! ATTTTTTTTTTTTTGAAGAA+CGG - chr4_2:4178575-4178594 Msa0584550:intron 10.0%
!! AACAATATTATTATATTGTT+AGG + chr4_2:4179105-4179124 None:intergenic 10.0%
!! AAAAATATAATTTAATGACG+TGG - chr4_2:4176517-4176536 Msa0584550:three_prime_UTR 15.0%
!!! GATTGATTTGTTTATAATTA+TGG - chr4_2:4176754-4176773 Msa0584550:CDS 15.0%
!! TAATTACTGTTTATGTTAAT+TGG - chr4_2:4176999-4177018 Msa0584550:intron 15.0%
!!! TAGCTTTTCTTTAAAAAATT+GGG - chr4_2:4177088-4177107 Msa0584550:intron 15.0%
!!! AAGTATACATTTTTTAAAAC+TGG + chr4_2:4178842-4178861 None:intergenic 15.0%
!! AAATTATTCTTTAATGTAGT+AGG + chr4_2:4179518-4179537 None:intergenic 15.0%
!! ATTAAACAAAATCAAATCAA+TGG - chr4_2:4179538-4179557 Msa0584550:intron 15.0%
!! CCAAATTATATCAATTTATT+AGG + chr4_2:4180561-4180580 None:intergenic 15.0%
!! CCTAATAAATTGATATAATT+TGG - chr4_2:4180558-4180577 Msa0584550:intron 15.0%
!! AATAAATTGATATAATTTGG+TGG - chr4_2:4180561-4180580 Msa0584550:intron 15.0%
!! ACACATAAATAATCAATTAT+TGG + chr4_2:4180608-4180627 None:intergenic 15.0%
!! ATAATTGATTATTTATGTGT+TGG - chr4_2:4180608-4180627 Msa0584550:five_prime_UTR 15.0%
!! TTAAAAAACTAATAGAGGTT+TGG + chr4_2:4176327-4176346 None:intergenic 20.0%
!! AAGTGTAATATCACAAAAAT+GGG - chr4_2:4176566-4176585 Msa0584550:three_prime_UTR 20.0%
!!! TTTCGTTGAAATTTTCAATT+TGG - chr4_2:4176668-4176687 Msa0584550:three_prime_UTR 20.0%
!! GTTTATAATTATGGAATTAG+TGG - chr4_2:4176763-4176782 Msa0584550:CDS 20.0%
!!! CTAGCTTTTCTTTAAAAAAT+TGG - chr4_2:4177087-4177106 Msa0584550:intron 20.0%
!!! TTCTTTAAAAAATTGGGTAA+AGG - chr4_2:4177094-4177113 Msa0584550:intron 20.0%
!!! TCTTTAAAAAATTGGGTAAA+GGG - chr4_2:4177095-4177114 Msa0584550:intron 20.0%
!! TATATGTATCATTTAGTAGT+AGG - chr4_2:4177353-4177372 Msa0584550:CDS 20.0%
!! ATGTAAAAAAATCTTTACAC+TGG - chr4_2:4177441-4177460 Msa0584550:intron 20.0%
!! AGAAATGTTAATATCATAAC+AGG - chr4_2:4177588-4177607 Msa0584550:intron 20.0%
!!! ATACTTTTTTTTATCAAGCA+AGG + chr4_2:4177730-4177749 None:intergenic 20.0%
!!! GAATCTTTTATATAGTGTTA+CGG - chr4_2:4178222-4178241 Msa0584550:intron 20.0%
!!! TATACATTTTTTAAAACTGG+TGG + chr4_2:4178839-4178858 None:intergenic 20.0%
!!! GAATTTTTTGTAATGAATCA+AGG - chr4_2:4179309-4179328 Msa0584550:CDS 20.0%
!! ATAAGTTCAAATAAGTCAAT+CGG + chr4_2:4179778-4179797 None:intergenic 20.0%
!! TACAAACCTAAAAAGATAAT+GGG + chr4_2:4180005-4180024 None:intergenic 20.0%
!! ATACAAACCTAAAAAGATAA+TGG + chr4_2:4180006-4180025 None:intergenic 20.0%
!! AGTTAACACTTTCAAATTAT+TGG - chr4_2:4180036-4180055 Msa0584550:intron 20.0%
!! GTTAACACTTTCAAATTATT+GGG - chr4_2:4180037-4180056 Msa0584550:intron 20.0%
!! TGGACAAAAATATATAGAAA+AGG + chr4_2:4180315-4180334 None:intergenic 20.0%
!! ATATTTCTCTCTATATATAC+TGG + chr4_2:4180335-4180354 None:intergenic 20.0%
!! AATAATCAATTATTGGCAAA+AGG + chr4_2:4180601-4180620 None:intergenic 20.0%
! ATAGCATAAGATATAAGCTA+AGG - chr4_2:4176291-4176310 Msa0584550:three_prime_UTR 25.0%
! TAGAGAAAGAATGAAAATAG+TGG + chr4_2:4176379-4176398 None:intergenic 25.0%
! CTTCAATATGCAAAATAACT+GGG + chr4_2:4176466-4176485 None:intergenic 25.0%
! ACTTCAATATGCAAAATAAC+TGG + chr4_2:4176467-4176486 None:intergenic 25.0%
! GAAGTGTAATATCACAAAAA+TGG - chr4_2:4176565-4176584 Msa0584550:three_prime_UTR 25.0%
! TAAAGAAAAGCTAGCTATTA+AGG + chr4_2:4177081-4177100 None:intergenic 25.0%
!! CTTTAAAAAATTGGGTAAAG+GGG - chr4_2:4177096-4177115 Msa0584550:intron 25.0%
!!! ATAACTGGAATTTGTTTCTA+AGG + chr4_2:4177223-4177242 None:intergenic 25.0%
! TTAGTAGTAGGTATAATTCT+TGG - chr4_2:4177365-4177384 Msa0584550:intron 25.0%
! TAAAAAAATCTTTACACTGG+CGG - chr4_2:4177444-4177463 Msa0584550:intron 25.0%
! TAACGATTGAACATATTGTT+TGG - chr4_2:4177526-4177545 Msa0584550:CDS 25.0%
! AACGATTGAACATATTGTTT+GGG - chr4_2:4177527-4177546 Msa0584550:CDS 25.0%
! GTTAATATCATAACAGGATA+TGG - chr4_2:4177594-4177613 Msa0584550:intron 25.0%
! TAAATTGAATGTAGTTTCTG+AGG - chr4_2:4177667-4177686 Msa0584550:intron 25.0%
! AAATTGAATGTAGTTTCTGA+GGG - chr4_2:4177668-4177687 Msa0584550:intron 25.0%
! GACTATTTCAAATTTAGAGA+TGG - chr4_2:4177998-4178017 Msa0584550:CDS 25.0%
!!! TATTAAAGCATTTTGAATCG+TGG + chr4_2:4178454-4178473 None:intergenic 25.0%
! AGTTATGACTGATAAATAGA+TGG + chr4_2:4178532-4178551 None:intergenic 25.0%
! GAAAAAACGTATAATTGATC+TGG - chr4_2:4178603-4178622 Msa0584550:CDS 25.0%
! AAAGATGAGAAAAGGAAAAT+GGG + chr4_2:4178766-4178785 None:intergenic 25.0%
! AAAAGATGAGAAAAGGAAAA+TGG + chr4_2:4178767-4178786 None:intergenic 25.0%
! GTATTACAAAAGATGAGAAA+AGG + chr4_2:4178774-4178793 None:intergenic 25.0%
! GATGATGTTCATGTAAATAT+AGG - chr4_2:4178972-4178991 Msa0584550:CDS 25.0%
! ATACATATCTATAAACCAGT+AGG - chr4_2:4179491-4179510 Msa0584550:intron 25.0%
! TGTTTGTATATGTTCATATC+AGG - chr4_2:4179578-4179597 Msa0584550:intron 25.0%
! ACATTTGTAAGAATGCTTAT+TGG - chr4_2:4179810-4179829 Msa0584550:intron 25.0%
!!! GTTGTTTTTATAAGTTTTGC+TGG + chr4_2:4179886-4179905 None:intergenic 25.0%
! AATTAAGCTGTTTATCCAAA+CGG - chr4_2:4179978-4179997 Msa0584550:intron 25.0%
! ATCTCTTCTTAAAATGTAGA+AGG + chr4_2:4180420-4180439 None:intergenic 25.0%
!!! TTTTAAGAAGAGATTGTTCA+TGG - chr4_2:4180426-4180445 Msa0584550:CDS 25.0%
! GGAACTATTAACAAACAAAA+TGG + chr4_2:4180519-4180538 None:intergenic 25.0%
!! TTGTTTGTTAATAGTTCCAA+TGG - chr4_2:4180521-4180540 Msa0584550:five_prime_UTR 25.0%
TTTGTTTGCAAGTATGGTAA+GGG + chr4_2:4176238-4176257 None:intergenic 30.0%
!! TTTTGTTTGCAAGTATGGTA+AGG + chr4_2:4176239-4176258 None:intergenic 30.0%
TCTTCTTCTTCTTCTTCATA+AGG - chr4_2:4176414-4176433 Msa0584550:three_prime_UTR 30.0%
! GTGTTTTATGAGACTTTGTT+TGG - chr4_2:4176690-4176709 Msa0584550:three_prime_UTR 30.0%
!! GAATTAGTGGATTTAGATCT+GGG - chr4_2:4176776-4176795 Msa0584550:CDS 30.0%
ACGATTGAACATATTGTTTG+GGG - chr4_2:4177528-4177547 Msa0584550:CDS 30.0%
AATTCGAAAATTGTAAGCGT+CGG - chr4_2:4177695-4177714 Msa0584550:CDS 30.0%
!!! TGTTTTTTTCTTGTGTCTGT+TGG - chr4_2:4177779-4177798 Msa0584550:intron 30.0%
TATGTATGGTGAAGATTTCA+AGG - chr4_2:4177849-4177868 Msa0584550:intron 30.0%
ATGTATGGTGAAGATTTCAA+GGG - chr4_2:4177850-4177869 Msa0584550:intron 30.0%
ACTGCATATAACTTACTGTT+TGG + chr4_2:4177884-4177903 None:intergenic 30.0%
AAACAGTAAGTTATATGCAG+TGG - chr4_2:4177883-4177902 Msa0584550:intron 30.0%
! TTCAAATTTAGAGATGGACT+TGG - chr4_2:4178004-4178023 Msa0584550:CDS 30.0%
TATTAATACCAACGACCATA+AGG + chr4_2:4178121-4178140 None:intergenic 30.0%
! TGATTGTTCCTTTGATAACA+TGG - chr4_2:4178289-4178308 Msa0584550:CDS 30.0%
! TCCTTTGATAACATGGATAT+AGG - chr4_2:4178296-4178315 Msa0584550:CDS 30.0%
ACCTATATCCATGTTATCAA+AGG + chr4_2:4178300-4178319 None:intergenic 30.0%
TGACAAAAGAAAGAAACTAG+AGG - chr4_2:4178319-4178338 Msa0584550:intron 30.0%
! CAACGATTTTGTTGCATAAT+TGG - chr4_2:4178401-4178420 Msa0584550:intron 30.0%
CAGTCATAACTCAACTATAT+TGG - chr4_2:4178541-4178560 Msa0584550:intron 30.0%
!! TTTTTAACTAGTGCTACATC+AGG - chr4_2:4178634-4178653 Msa0584550:CDS 30.0%
AAGATGAGAAAAGGAAAATG+GGG + chr4_2:4178765-4178784 None:intergenic 30.0%
TTTATGCAGAATCATGTTGA+AGG - chr4_2:4178864-4178883 Msa0584550:CDS 30.0%
TATGCATAAGCATAACAACT+TGG - chr4_2:4179032-4179051 Msa0584550:intron 30.0%
!!! TCAATCTTTTTCAGCAACAT+TGG - chr4_2:4179203-4179222 Msa0584550:intron 30.0%
!!! CAATCTTTTTCAGCAACATT+GGG - chr4_2:4179204-4179223 Msa0584550:intron 30.0%
!!! TGTATATCCGTTGTTTTGAT+CGG + chr4_2:4179248-4179267 None:intergenic 30.0%
TCAAAACAACGGATATACAT+TGG - chr4_2:4179249-4179268 Msa0584550:intron 30.0%
!!! AAAATTCTCACTTTTGAGAC+AGG + chr4_2:4179296-4179315 None:intergenic 30.0%
!! GTATGCTATTTCCAATGATT+TGG - chr4_2:4179464-4179483 Msa0584550:intron 30.0%
TATGTATGTTGCCAAATCAT+TGG + chr4_2:4179478-4179497 None:intergenic 30.0%
TTCAAGAACAAATATTCACC+TGG + chr4_2:4179709-4179728 None:intergenic 30.0%
ACCTAAATCATGGTTTGAAA+GGG + chr4_2:4179749-4179768 None:intergenic 30.0%
AACCTAAATCATGGTTTGAA+AGG + chr4_2:4179750-4179769 None:intergenic 30.0%
! GGAAGTAAGTTGAAAACTTA+TGG + chr4_2:4179854-4179873 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+GGG - chr4_2:4179979-4179998 Msa0584550:intron 30.0%
ACACTTTCAAATTATTGGGT+TGG - chr4_2:4180041-4180060 Msa0584550:intron 30.0%
! TTATGTTTTCAGATTGCGAA+TGG - chr4_2:4180064-4180083 Msa0584550:intron 30.0%
!! TTTGTGTTGCTTCATTTGAT+TGG - chr4_2:4180106-4180125 Msa0584550:intron 30.0%
TACTTCTTTAATCCTATCAG+CGG + chr4_2:4180154-4180173 None:intergenic 30.0%
! GGATTAAAGAAGTACATAGA+AGG - chr4_2:4180160-4180179 Msa0584550:intron 30.0%
GGAAAAAAGAAAAATCTTGC+AGG + chr4_2:4180294-4180313 None:intergenic 30.0%
! TCTATTCTTTGTTGCTTGAA+AGG - chr4_2:4180492-4180511 Msa0584550:five_prime_UTR 30.0%
! CTATTCTTTGTTGCTTGAAA+GGG - chr4_2:4180493-4180512 Msa0584550:five_prime_UTR 30.0%
TCAATTATTGGCAAAAGGAA+AGG + chr4_2:4180596-4180615 None:intergenic 30.0%
AAATTGTTACGAAGTAGAGT+CGG + chr4_2:4180701-4180720 None:intergenic 30.0%
!! GTAGCTTTTGTTTGCAAGTA+TGG + chr4_2:4176244-4176263 None:intergenic 35.0%
TATGTGAGTTGTGTTGTGTT+GGG + chr4_2:4176270-4176289 None:intergenic 35.0%
! ATAGTGGAGTTTGAGAAAGA+TGG + chr4_2:4176363-4176382 None:intergenic 35.0%
TTAATGACGTGGAAAAGTAG+AGG - chr4_2:4176528-4176547 Msa0584550:three_prime_UTR 35.0%
!! GGAATTAGTGGATTTAGATC+TGG - chr4_2:4176775-4176794 Msa0584550:CDS 35.0%
! TGGATTTAGATCTGGGATTA+TGG - chr4_2:4176783-4176802 Msa0584550:CDS 35.0%
!!! TGCTGTTTTTGAAGTAAGAG+AGG - chr4_2:4176970-4176989 Msa0584550:intron 35.0%
!!! GCTGTTTTTGAAGTAAGAGA+GGG - chr4_2:4176971-4176990 Msa0584550:intron 35.0%
! GTTTGACTTTGTAACCTCAA+GGG + chr4_2:4177191-4177210 None:intergenic 35.0%
! AGTTTGACTTTGTAACCTCA+AGG + chr4_2:4177192-4177211 None:intergenic 35.0%
ATCTGCCTTCTTCTTTATTC+CGG - chr4_2:4177249-4177268 Msa0584550:intron 35.0%
AAAAAATACACTCCACCAAC+CGG + chr4_2:4177271-4177290 None:intergenic 35.0%
ATATTGTTTGGGGAATCAAG+TGG - chr4_2:4177538-4177557 Msa0584550:CDS 35.0%
! TGGAGTATTCCTGAACAAAA+TGG - chr4_2:4177614-4177633 Msa0584550:intron 35.0%
TCCAATTTAGTTGCAAGATC+TGG - chr4_2:4177804-4177823 Msa0584550:intron 35.0%
TCCAGATCTTGCAACTAAAT+TGG + chr4_2:4177808-4177827 None:intergenic 35.0%
TTGGACTTACGATTACATCA+TGG + chr4_2:4177913-4177932 None:intergenic 35.0%
ACAGCACATTTGCATTAGTT+TGG + chr4_2:4177955-4177974 None:intergenic 35.0%
CTCCTGTTTCAGAAGATATA+AGG - chr4_2:4178066-4178085 Msa0584550:CDS 35.0%
!! GTCCTTATATCTTCTGAAAC+AGG + chr4_2:4178071-4178090 None:intergenic 35.0%
TACCTTCAATTATGAACCTG+TGG + chr4_2:4178192-4178211 None:intergenic 35.0%
CAGGTTCATAATTGAAGGTA+TGG - chr4_2:4178192-4178211 Msa0584550:intron 35.0%
AAGAAACTAGAGGAAGAGAA+AGG - chr4_2:4178329-4178348 Msa0584550:intron 35.0%
ATTGTCATGCGCTTTGTAAT+TGG - chr4_2:4178353-4178372 Msa0584550:intron 35.0%
!! GTTTCTACATCGTGTTTTTG+AGG - chr4_2:4178423-4178442 Msa0584550:intron 35.0%
!! GACACTGTCATTGCTTTTAA+AGG - chr4_2:4178797-4178816 Msa0584550:CDS 35.0%
TTGTCTTTGCTGACAATTCA+AGG + chr4_2:4178893-4178912 None:intergenic 35.0%
GAGCAGGATATTAAGACAAA+AGG + chr4_2:4179185-4179204 None:intergenic 35.0%
TTAGACACCGATCAAAACAA+CGG - chr4_2:4179238-4179257 Msa0584550:intron 35.0%
TACATTGGATGCATGAAATC+TGG - chr4_2:4179264-4179283 Msa0584550:intron 35.0%
TTTAATGTAGTAGGACCTAC+TGG + chr4_2:4179509-4179528 None:intergenic 35.0%
TCTTCATAAGTATGCCAATG+AGG - chr4_2:4179606-4179625 Msa0584550:intron 35.0%
TCAATAGGAGCTTGGTTTAT+TGG - chr4_2:4179634-4179653 Msa0584550:intron 35.0%
AAGAACAAATATTCACCTGG+AGG + chr4_2:4179706-4179725 None:intergenic 35.0%
ACCCTTTCAAACCATGATTT+AGG - chr4_2:4179745-4179764 Msa0584550:intron 35.0%
! AAAGAAGTACATAGAAGGTG+TGG - chr4_2:4180165-4180184 Msa0584550:intron 35.0%
GAGAAGGTGAAAATGCTTTA+TGG - chr4_2:4180187-4180206 Msa0584550:intron 35.0%
! TTTATGGAGTGCTTCTTTCT+AGG - chr4_2:4180203-4180222 Msa0584550:intron 35.0%
AGTTAGGAAGAACTCATCAA+AGG + chr4_2:4180236-4180255 None:intergenic 35.0%
GGTAATAATCTTCCTGAGTT+AGG + chr4_2:4180252-4180271 None:intergenic 35.0%
AAAGAAAAATCTTGCAGGCT+TGG + chr4_2:4180289-4180308 None:intergenic 35.0%
CTTAAAATGTAGAAGGTCCA+TGG + chr4_2:4180413-4180432 None:intergenic 35.0%
TGTATCTTAGTAATTCCCCT+AGG - chr4_2:4180664-4180683 Msa0584550:five_prime_UTR 35.0%
GTATCTTAGTAATTCCCCTA+GGG - chr4_2:4180665-4180684 Msa0584550:five_prime_UTR 35.0%
TATCTTAGTAATTCCCCTAG+GGG - chr4_2:4180666-4180685 Msa0584550:five_prime_UTR 35.0%
CTATGTGAGTTGTGTTGTGT+TGG + chr4_2:4176271-4176290 None:intergenic 40.0%
!!! TGGGCACTTTTTCTTTGTCT+CGG - chr4_2:4176585-4176604 Msa0584550:three_prime_UTR 40.0%
AAGGCAGATCTGCAAATAAC+TGG + chr4_2:4177238-4177257 None:intergenic 40.0%
ACCAACCGGAATAAAGAAGA+AGG + chr4_2:4177257-4177276 None:intergenic 40.0%
TTCTTCTTTATTCCGGTTGG+TGG - chr4_2:4177256-4177275 Msa0584550:intron 40.0%
! CTTGCAAGTCCATTTTGTTC+AGG + chr4_2:4177626-4177645 None:intergenic 40.0%
!! TTACCAGTTTCTGAAGCTGT+CGG + chr4_2:4177650-4177669 None:intergenic 40.0%
AGTTGCAAGATCTGGAAATG+AGG - chr4_2:4177812-4177831 Msa0584550:intron 40.0%
CGCGAAACTAGAGATATGTA+TGG - chr4_2:4177835-4177854 Msa0584550:intron 40.0%
CTGTGTTGAATGTAGAGCTT+TGG - chr4_2:4177971-4177990 Msa0584550:intron 40.0%
!! AGAAAGTACCTTATGGTCGT+TGG - chr4_2:4178110-4178129 Msa0584550:intron 40.0%
TTAATACTGCCTTTAGCAGC+AGG - chr4_2:4178135-4178154 Msa0584550:intron 40.0%
CTTTAGCAGCAGGAAAAGAA+GGG - chr4_2:4178145-4178164 Msa0584550:intron 40.0%
TGCCACAGGTTCATAATTGA+AGG - chr4_2:4178187-4178206 Msa0584550:intron 40.0%
TTAACTAGTGCTACATCAGG+AGG - chr4_2:4178637-4178656 Msa0584550:CDS 40.0%
! CTGCTTCAATAGCTCTATCT+AGG + chr4_2:4178666-4178685 None:intergenic 40.0%
AGATAGAGCTATTGAAGCAG+AGG - chr4_2:4178666-4178685 Msa0584550:intron 40.0%
! GAAAGCATGGAGATTTCTTG+AGG - chr4_2:4178692-4178711 Msa0584550:intron 40.0%
TGAGAAAAGGAAAATGGGGT+AGG + chr4_2:4178761-4178780 None:intergenic 40.0%
GTTGCTGAAAAAGATTGAGC+AGG + chr4_2:4179201-4179220 None:intergenic 40.0%
TTCTTACCTTGTTGCACAGA+GGG - chr4_2:4179364-4179383 Msa0584550:intron 40.0%
TCCTATTGACACATCCTCAT+TGG + chr4_2:4179623-4179642 None:intergenic 40.0%
TTGGTTTATTGGACTTGACG+TGG - chr4_2:4179645-4179664 Msa0584550:intron 40.0%
TCGGAACAGAACCTAAATCA+TGG + chr4_2:4179759-4179778 None:intergenic 40.0%
! AAGTTTTGCTGGAGAGCTAA+TGG + chr4_2:4179875-4179894 None:intergenic 40.0%
!! AAAAAGATAATGGGCCCGTT+TGG + chr4_2:4179996-4180015 None:intergenic 40.0%
! AACGGGCCCATTATCTTTTT+AGG - chr4_2:4179996-4180015 Msa0584550:intron 40.0%
! GTTTTCAGATTGCGAATGGA+AGG - chr4_2:4180068-4180087 Msa0584550:intron 40.0%
TGATGAGTTCTTCCTAACTC+AGG - chr4_2:4180237-4180256 Msa0584550:intron 40.0%
! TTTTACACGCGAGAAAAAGC+TGG - chr4_2:4180357-4180376 Msa0584550:CDS 40.0%
! TCATGGTTTGCAGCTAGATA+AGG - chr4_2:4180443-4180462 Msa0584550:exon 40.0%
! TCGGTATATTTTTCCCCTAG+GGG + chr4_2:4180682-4180701 None:intergenic 40.0%
! GTCGGTATATTTTTCCCCTA+GGG + chr4_2:4180683-4180702 None:intergenic 40.0%
! AGTCGGTATATTTTTCCCCT+AGG + chr4_2:4180684-4180703 None:intergenic 40.0%
GTGGAGTTTGAGAAAGATGG+TGG + chr4_2:4176360-4176379 None:intergenic 45.0%
CTGGAATGCTCTTCACTAAC+AGG - chr4_2:4176619-4176638 Msa0584550:three_prime_UTR 45.0%
GGACGGAGTTCAAATTCTCT+CGG + chr4_2:4177170-4177189 None:intergenic 45.0%
AATTTGAACTCCGTCCCTTG+AGG - chr4_2:4177174-4177193 Msa0584550:intron 45.0%
GACTTTGTAACCTCAAGGGA+CGG + chr4_2:4177187-4177206 None:intergenic 45.0%
GCCTTCTTCTTTATTCCGGT+TGG - chr4_2:4177253-4177272 Msa0584550:intron 45.0%
TGTTTGGGGAATCAAGTGGA+TGG - chr4_2:4177542-4177561 Msa0584550:CDS 45.0%
GTTCAAGAGTCAGTACGAAG+TGG - chr4_2:4178041-4178060 Msa0584550:CDS 45.0%
TATAAGGACGACTGAGTCGA+CGG - chr4_2:4178082-4178101 Msa0584550:CDS 45.0%
!! GGGCAAGAGAAAGTACCTTA+TGG - chr4_2:4178103-4178122 Msa0584550:intron 45.0%
! CCTTCTTTTCCTGCTGCTAA+AGG + chr4_2:4178147-4178166 None:intergenic 45.0%
CCTTTAGCAGCAGGAAAAGA+AGG - chr4_2:4178144-4178163 Msa0584550:intron 45.0%
AGGAAAAGAAGGGACTCGTT+CGG - chr4_2:4178155-4178174 Msa0584550:intron 45.0%
TGCGCTTTGTAATTGGACAC+AGG - chr4_2:4178360-4178379 Msa0584550:intron 45.0%
!!! TCTCACTTTTGAGACAGGAC+AGG + chr4_2:4179291-4179310 None:intergenic 45.0%
CTCTGTGCAACAAGGTAAGA+AGG + chr4_2:4179365-4179384 None:intergenic 45.0%
CTTCTTACCTTGTTGCACAG+AGG - chr4_2:4179363-4179382 Msa0584550:intron 45.0%
TCTTACCTTGTTGCACAGAG+GGG - chr4_2:4179365-4179384 Msa0584550:intron 45.0%
GATACCATGAACCTGAGCAT+TGG - chr4_2:4179391-4179410 Msa0584550:intron 45.0%
ACTTCCAATGCTCAGGTTCA+TGG + chr4_2:4179398-4179417 None:intergenic 45.0%
!! GAACCTGAGCATTGGAAGTT+TGG - chr4_2:4179399-4179418 Msa0584550:intron 45.0%
AATAGCATACAACTGCCCTG+TGG + chr4_2:4179454-4179473 None:intergenic 45.0%
GCCAATGAGGATGTGTCAAT+AGG - chr4_2:4179619-4179638 Msa0584550:intron 45.0%
AGGATGTGTCAATAGGAGCT+TGG - chr4_2:4179626-4179645 Msa0584550:intron 45.0%
TCATTTGATTGGAGCTGCAG+TGG - chr4_2:4180117-4180136 Msa0584550:intron 45.0%
GAATTTGTAGGTCCGCTGAT+AGG - chr4_2:4180139-4180158 Msa0584550:intron 45.0%
! GTACATAGAAGGTGTGGAGA+AGG - chr4_2:4180171-4180190 Msa0584550:intron 45.0%
! TTGCAGGCTTGGTTTCTTTC+TGG + chr4_2:4180278-4180297 None:intergenic 45.0%
AAGAGAGAATGCTTGCTCCA+TGG - chr4_2:4180393-4180412 Msa0584550:CDS 45.0%
GCAAGTATGGTAAGGGACGT+TGG + chr4_2:4176231-4176250 None:intergenic 50.0%
TGTCTCGGTAGTTTCTGTGC+TGG - chr4_2:4176600-4176619 Msa0584550:three_prime_UTR 50.0%
AGACCGACAGCTTCAGAAAC+TGG - chr4_2:4177644-4177663 Msa0584550:intron 50.0%
ATAAGGACGACTGAGTCGAC+GGG - chr4_2:4178083-4178102 Msa0584550:CDS 50.0%
GGAAAAGAAGGGACTCGTTC+GGG - chr4_2:4178156-4178175 Msa0584550:intron 50.0%
GAAGCAGAGGACAGAAAGCA+TGG - chr4_2:4178679-4178698 Msa0584550:intron 50.0%
GCATGGAGATTTCTTGAGGC+TGG - chr4_2:4178696-4178715 Msa0584550:intron 50.0%
TTGCCACTGCTGTGAGCTTA+TGG - chr4_2:4178922-4178941 Msa0584550:CDS 50.0%
TGCCACTGCTGTGAGCTTAT+GGG - chr4_2:4178923-4178942 Msa0584550:CDS 50.0%
ATCCCATAAGCTCACAGCAG+TGG + chr4_2:4178928-4178947 None:intergenic 50.0%
TCTTACCCCTCTGTGCAACA+AGG + chr4_2:4179373-4179392 None:intergenic 50.0%
TCGCCAAACTTCCAATGCTC+AGG + chr4_2:4179405-4179424 None:intergenic 50.0%
CATTGGAAGTTTGGCGAGTC+TGG - chr4_2:4179408-4179427 Msa0584550:intron 50.0%
GATGACCGAAGACTTTGCTG+TGG - chr4_2:4179676-4179695 Msa0584550:intron 50.0%
GAGTGCCACAGCAAAGTCTT+CGG + chr4_2:4179684-4179703 None:intergenic 50.0%
GGAGCTGCAGTGGAATTTGT+AGG - chr4_2:4180127-4180146 Msa0584550:intron 50.0%
! GGCTTGGTTTCTTTCTGGAG+TGG + chr4_2:4180273-4180292 None:intergenic 50.0%
! GGAGCTTGATAGCTAGCCAT+TGG + chr4_2:4180540-4180559 None:intergenic 50.0%
AAGTACTTCCGCCATGCCAC+AGG - chr4_2:4179435-4179454 Msa0584550:intron 55.0%
AGTACTTCCGCCATGCCACA+GGG - chr4_2:4179436-4179455 Msa0584550:intron 55.0%
CATACAACTGCCCTGTGGCA+TGG + chr4_2:4179449-4179468 None:intergenic 55.0%
! AGATGGACTTGGCTGCTGCG+AGG - chr4_2:4178015-4178034 Msa0584550:CDS 60.0%
! GATGGACTTGGCTGCTGCGA+GGG - chr4_2:4178016-4178035 Msa0584550:CDS 60.0%
AAGGGACTCGTTCGGGCTAC+TGG - chr4_2:4178163-4178182 Msa0584550:intron 60.0%
! TTCGGGCTACTGGTTGCCAC+AGG - chr4_2:4178173-4178192 Msa0584550:intron 60.0%
ACAACTGCCCTGTGGCATGG+CGG + chr4_2:4179446-4179465 None:intergenic 60.0%
! CTTTGCTGTGGCACTCCTCC+AGG - chr4_2:4179688-4179707 Msa0584550:intron 60.0%
! TGCGAATGGAAGGCGCAAGC+AGG - chr4_2:4180078-4180097 Msa0584550:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 4176221 4180756 4176221 ID=Msa0584550;Name=Msa0584550
chr4_2 mRNA 4176221 4180756 4176221 ID=Msa0584550-mRNA-1;Parent=Msa0584550;Name=Msa0584550-mRNA-1;_AED=0.13;_eAED=0.13;_QI=289|0.90|0.91|1|0.90|0.83|12|532|401
chr4_2 exon 4176221 4176901 4176221 ID=Msa0584550-mRNA-1:exon:1113;Parent=Msa0584550-mRNA-1
chr4_2 exon 4177283 4177377 4177283 ID=Msa0584550-mRNA-1:exon:1112;Parent=Msa0584550-mRNA-1
chr4_2 exon 4177469 4177594 4177469 ID=Msa0584550-mRNA-1:exon:1111;Parent=Msa0584550-mRNA-1
chr4_2 exon 4177673 4177760 4177673 ID=Msa0584550-mRNA-1:exon:1110;Parent=Msa0584550-mRNA-1
chr4_2 exon 4177984 4178104 4177984 ID=Msa0584550-mRNA-1:exon:1109;Parent=Msa0584550-mRNA-1
chr4_2 exon 4178260 4178332 4178260 ID=Msa0584550-mRNA-1:exon:1108;Parent=Msa0584550-mRNA-1
chr4_2 exon 4178596 4178659 4178596 ID=Msa0584550-mRNA-1:exon:1107;Parent=Msa0584550-mRNA-1
chr4_2 exon 4178783 4178991 4178783 ID=Msa0584550-mRNA-1:exon:1106;Parent=Msa0584550-mRNA-1
chr4_2 exon 4179090 4179163 4179090 ID=Msa0584550-mRNA-1:exon:1105;Parent=Msa0584550-mRNA-1
chr4_2 exon 4179271 4179367 4179271 ID=Msa0584550-mRNA-1:exon:1104;Parent=Msa0584550-mRNA-1
chr4_2 exon 4180337 4180544 4180337 ID=Msa0584550-mRNA-1:exon:1103;Parent=Msa0584550-mRNA-1
chr4_2 exon 4180566 4180756 4180566 ID=Msa0584550-mRNA-1:exon:1102;Parent=Msa0584550-mRNA-1
chr4_2 five_prime_UTR 4180566 4180756 4180566 ID=Msa0584550-mRNA-1:five_prime_utr;Parent=Msa0584550-mRNA-1
chr4_2 five_prime_UTR 4180447 4180544 4180447 ID=Msa0584550-mRNA-1:five_prime_utr;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4180337 4180446 4180337 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4179271 4179367 4179271 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4179090 4179163 4179090 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4178783 4178991 4178783 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4178596 4178659 4178596 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4178260 4178332 4178260 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4177984 4178104 4177984 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4177673 4177760 4177673 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4177469 4177594 4177469 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4177283 4177377 4177283 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 CDS 4176753 4176901 4176753 ID=Msa0584550-mRNA-1:cds;Parent=Msa0584550-mRNA-1
chr4_2 three_prime_UTR 4176221 4176752 4176221 ID=Msa0584550-mRNA-1:three_prime_utr;Parent=Msa0584550-mRNA-1
Gene Sequence

>Msa0584550

ATGACGTGGAAAAGTAGAGGAGAATTTTCTTCAAGAAGTGTAATATCACAAAAATGGGCACTTTTTCTTTGTCTCGGTAGTTTCTGTGCTGGAATGCTCTTCACTAACAGGATATGGAGTATTCCTGAACAAAATGGACTTGCAAGACCGACAGCTTCAGAAACTGGTAAATTGAATGTAGTTTCTGAGGGTTGTAATTCGAAAATTTTGCAAGATCTGGAAATGAGGCGCGAAACTAGAGATATGTATGGTGAAGATTTCAAGGGTCATAATTCCAAACAAGCTTTGGATAAGACTATTTCAAATTTAGAGATGGACTTGGCTGCTGCGAGGGCTGTTCAAGAGTCAGTACGAAGTGGTGCTCCTGTTTCAGAAGATATAAGGACGACTGAGTCGACGGGCAAGAGAAAGTACCTTATGGTCGTTGGTATTAATACTGCCTTTAGCAGCAGGAAAAGAAGGGACTCGTTCGGGCTACTGGTTGCCACAGGTGACAAAAGAAAGAAACTAGAGGAAGAGAAAGGCATTGTCATGCGCTTTGTAATTGGACACAGTGCTACATCAGGAGGTATCCTAGATAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACTGCTGTGAGCTTATGGGATGCTGATTTTTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACATTGGGAGAAACTCTAGTTAGACACCGATCAAAACAACGGATATACATTGGATGCATGAAATCTGGACCTGTCCTGTCTCAAAAAGGGGTAAGATACCATGAACCTGAGCATTGGAAGTTTGGCGAGTCTGGAAATAAGTACTTCCGCCATGCCACAGGGCAGTTGTATGCTATTTCCAATGATTTGGCAACATACATATCTATAAACCAGAACGTTCTTCATAAGTATGCCAATGAGGATGTGTCAATAGGAGCTTGGTTTATTGGACTTGACGTGGAGCATATTGATGACCGAAGACTTTGCTATTGCGAATGGAAGGCGCAAGCAGGCAACATTTGTGTTGCTTCATTTGATTGGAGCTGCAGTGGAATTTGTAGGTCCGCTGATAGGATTAAAGAAGTACATAGAAGGTGTGGAGAAGGTGAAAATGCTTTATGGAGTGCTTCTTTCTAG

Protein sequence

>Msa0584550

MTWKSRGEFSSRSVISQKWALFLCLGSFCAGMLFTNRIWSIPEQNGLARPTASETGKLNVVSEGCNSKILQDLEMRRETRDMYGEDFKGHNSKQALDKTISNLEMDLAAARAVQESVRSGAPVSEDIRTTESTGKRKYLMVVGINTAFSSRKRRDSFGLLVATGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVSLWDADFYVKVDDDVHVNIATLGETLVRHRSKQRIYIGCMKSGPVLSQKGVRYHEPEHWKFGESGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSIGAWFIGLDVEHIDDRRLCYCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSASF*