Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0632730 | XP_003605063.1 | 92.113 | 355 | 18 | 1 | 1 | 345 | 1 | 355 | 0.0 | 630 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0632730 | sp|Q8GWW8|GFA2_ARATH | 50.000 | 376 | 151 | 9 | 1 | 345 | 1 | 370 | 6.55e-113 | 340 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0632730 | G7JDD2 | 92.113 | 355 | 18 | 1 | 1 | 345 | 1 | 355 | 0.0 | 630 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0632730 | 0.803599 | 3.228006e-49 | -8.615850e-47 |
Msa0006110 | Msa0632730 | 0.801104 | 1.053729e-48 | -8.615850e-47 |
Msa0036920 | Msa0632730 | 0.821871 | 3.206634e-53 | -8.615850e-47 |
Msa0105070 | Msa0632730 | 0.804489 | 2.107642e-49 | -8.615850e-47 |
Msa0632730 | Msa0634550 | 0.802593 | 5.211577e-49 | -8.615850e-47 |
Msa0632730 | Msa0656020 | -0.813294 | 2.753649e-51 | -8.615850e-47 |
Msa0632730 | Msa0673460 | 0.829465 | 5.070898e-55 | -8.615850e-47 |
Msa0632730 | Msa0685750 | 0.801125 | 1.043333e-48 | -8.615850e-47 |
Msa0632730 | Msa0688070 | 0.808208 | 3.466807e-50 | -8.615850e-47 |
Msa0632730 | Msa0697040 | 0.803855 | 2.855894e-49 | -8.615850e-47 |
Msa0632730 | Msa0722070 | 0.825517 | 4.490374e-54 | -8.615850e-47 |
Msa0632730 | Msa0743720 | 0.816367 | 5.736606e-52 | -8.615850e-47 |
Msa0632730 | Msa0749290 | 0.810082 | 1.375554e-50 | -8.615850e-47 |
Msa0632730 | Msa0753720 | 0.839305 | 1.716115e-57 | -8.615850e-47 |
Msa0632730 | Msa0763400 | 0.815441 | 9.231016e-52 | -8.615850e-47 |
Msa0632730 | Msa0773540 | 0.814750 | 1.314267e-51 | -8.615850e-47 |
Msa0632730 | Msa0796980 | 0.801813 | 7.542758e-49 | -8.615850e-47 |
Msa0632730 | Msa0798860 | 0.802554 | 5.308632e-49 | -8.615850e-47 |
Msa0632730 | Msa0820840 | 0.803399 | 3.552213e-49 | -8.615850e-47 |
Msa0632730 | Msa0832340 | 0.807943 | 3.948088e-50 | -8.615850e-47 |
Msa0632730 | Msa0892080 | 0.823355 | 1.448067e-53 | -8.615850e-47 |
Msa0632730 | Msa0896750 | 0.807154 | 5.806278e-50 | -8.615850e-47 |
Msa0632730 | Msa0933100 | 0.818775 | 1.643404e-52 | -8.615850e-47 |
Msa0632730 | Msa0967580 | 0.831335 | 1.769697e-55 | -8.615850e-47 |
Msa0632730 | Msa0969520 | 0.804286 | 2.323453e-49 | -8.615850e-47 |
Msa0632730 | Msa1003620 | 0.818005 | 2.456572e-52 | -8.615850e-47 |
Msa0632730 | Msa1046460 | 0.810620 | 1.052671e-50 | -8.615850e-47 |
Msa0632730 | Msa1075220 | -0.803405 | 3.541545e-49 | -8.615850e-47 |
Msa0632730 | Msa1075540 | 0.801734 | 7.828995e-49 | -8.615850e-47 |
Msa0632730 | Msa1075670 | 0.804338 | 2.266331e-49 | -8.615850e-47 |
Msa0632730 | Msa1083840 | 0.809624 | 1.726198e-50 | -8.615850e-47 |
Msa0632730 | Msa1090260 | 0.815653 | 8.281370e-52 | -8.615850e-47 |
Msa0632730 | Msa1121490 | 0.801598 | 8.348245e-49 | -8.615850e-47 |
Msa0632730 | Msa1137570 | 0.810310 | 1.228271e-50 | -8.615850e-47 |
Msa0632730 | Msa1143270 | 0.802583 | 5.236034e-49 | -8.615850e-47 |
Msa0632730 | Msa1147790 | 0.802143 | 6.451968e-49 | -8.615850e-47 |
Msa0632730 | Msa1148920 | 0.809766 | 1.608636e-50 | -8.615850e-47 |
Msa0632730 | Msa1162550 | -0.833952 | 3.968651e-56 | -8.615850e-47 |
Msa0632730 | Msa1174040 | 0.816266 | 6.041950e-52 | -8.615850e-47 |
Msa0632730 | Msa1185980 | 0.813580 | 2.381528e-51 | -8.615850e-47 |
Msa0632730 | Msa1196960 | 0.811511 | 6.749347e-51 | -8.615850e-47 |
Msa0632730 | Msa1205130 | 0.828558 | 8.407996e-55 | -8.615850e-47 |
Msa0632730 | Msa1224480 | 0.811228 | 7.775001e-51 | -8.615850e-47 |
Msa0632730 | Msa1239720 | 0.804225 | 2.392436e-49 | -8.615850e-47 |
Msa0632730 | Msa1244250 | 0.801327 | 9.489260e-49 | -8.615850e-47 |
Msa0632730 | Msa1277660 | 0.813336 | 2.694488e-51 | -8.615850e-47 |
Msa0632730 | Msa1284680 | 0.807431 | 5.070789e-50 | -8.615850e-47 |
Msa0632730 | Msa1314340 | 0.811444 | 6.980817e-51 | -8.615850e-47 |
Msa0632730 | Msa1318990 | 0.800229 | 1.589836e-48 | -8.615850e-47 |
Msa0632730 | Msa1343760 | 0.801007 | 1.103264e-48 | -8.615850e-47 |
Msa0632730 | Msa1370070 | -0.805447 | 1.329157e-49 | -8.615850e-47 |
Msa0632730 | Msa1386730 | 0.801966 | 7.017647e-49 | -8.615850e-47 |
Msa0632730 | Msa1466540 | 0.812393 | 4.336282e-51 | -8.615850e-47 |
Msa0130970 | Msa0632730 | 0.804922 | 1.712051e-49 | -8.615850e-47 |
Msa0166870 | Msa0632730 | 0.822635 | 2.131770e-53 | -8.615850e-47 |
Msa0170230 | Msa0632730 | 0.802585 | 5.232900e-49 | -8.615850e-47 |
Msa0188460 | Msa0632730 | 0.801373 | 9.284902e-49 | -8.615850e-47 |
Msa0212990 | Msa0632730 | 0.808837 | 2.544583e-50 | -8.615850e-47 |
Msa0223910 | Msa0632730 | 0.824685 | 7.061529e-54 | -8.615850e-47 |
Msa0379640 | Msa0632730 | 0.804340 | 2.263672e-49 | -8.615850e-47 |
Msa0393080 | Msa0632730 | 0.805657 | 1.201146e-49 | -8.615850e-47 |
Msa0397750 | Msa0632730 | 0.816054 | 6.740453e-52 | -8.615850e-47 |
Msa0420960 | Msa0632730 | 0.825649 | 4.178934e-54 | -8.615850e-47 |
Msa0426640 | Msa0632730 | 0.844151 | 9.028017e-59 | -8.615850e-47 |
Msa0428590 | Msa0632730 | 0.804242 | 2.373063e-49 | -8.615850e-47 |
Msa0444750 | Msa0632730 | -0.813364 | 2.657039e-51 | -8.615850e-47 |
Msa0453640 | Msa0632730 | 0.804037 | 2.617961e-49 | -8.615850e-47 |
Msa0467060 | Msa0632730 | 0.845910 | 3.023612e-59 | -8.615850e-47 |
Msa0242430 | Msa0632730 | 0.806519 | 7.907355e-50 | -8.615850e-47 |
Msa0277470 | Msa0632730 | 0.801452 | 8.943240e-49 | -8.615850e-47 |
Msa0285450 | Msa0632730 | 0.815723 | 7.989066e-52 | -8.615850e-47 |
Msa0315290 | Msa0632730 | 0.803404 | 3.542610e-49 | -8.615850e-47 |
Msa0319170 | Msa0632730 | 0.809003 | 2.345472e-50 | -8.615850e-47 |
Msa0336040 | Msa0632730 | -0.803420 | 3.516070e-49 | -8.615850e-47 |
Msa0361780 | Msa0632730 | 0.804192 | 2.430410e-49 | -8.615850e-47 |
Msa0363790 | Msa0632730 | 0.803951 | 2.728279e-49 | -8.615850e-47 |
Msa0512750 | Msa0632730 | 0.800331 | 1.515658e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0632730 | MtrunA17_Chr4g0010781 | 92.113 | 355 | 18 | 1 | 1 | 345 | 1 | 355 | 0.0 | 630 |
Msa0632730 | MtrunA17_Chr3g0087741 | 62.778 | 360 | 115 | 5 | 1 | 345 | 1 | 356 | 2.28e-155 | 444 |
Msa0632730 | MtrunA17_Chr5g0426951 | 34.639 | 332 | 182 | 6 | 34 | 345 | 37 | 353 | 1.96e-57 | 194 |
Msa0632730 | MtrunA17_Chr4g0010801 | 53.614 | 166 | 38 | 1 | 196 | 322 | 2 | 167 | 6.99e-50 | 166 |
Msa0632730 | MtrunA17_Chr3g0123861 | 34.385 | 317 | 168 | 7 | 64 | 341 | 44 | 359 | 1.72e-42 | 153 |
Msa0632730 | MtrunA17_Chr8g0334811 | 36.014 | 286 | 141 | 10 | 87 | 344 | 15 | 286 | 1.62e-39 | 145 |
Msa0632730 | MtrunA17_Chr2g0333221 | 31.908 | 304 | 165 | 7 | 75 | 345 | 59 | 353 | 2.70e-37 | 140 |
Msa0632730 | MtrunA17_Chr6g0478651 | 29.795 | 292 | 165 | 6 | 85 | 345 | 67 | 349 | 7.32e-34 | 131 |
Msa0632730 | MtrunA17_Chr2g0322181 | 35.507 | 276 | 155 | 7 | 87 | 344 | 14 | 284 | 3.74e-31 | 122 |
Msa0632730 | MtrunA17_Chr4g0025401 | 35.145 | 276 | 154 | 8 | 87 | 344 | 14 | 282 | 9.30e-28 | 113 |
Msa0632730 | MtrunA17_Chr7g0269841 | 27.178 | 287 | 153 | 9 | 80 | 344 | 20 | 272 | 5.83e-15 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0632730 | AT5G48030.1 | 50.000 | 376 | 151 | 9 | 1 | 345 | 1 | 370 | 6.66e-114 | 340 |
Msa0632730 | AT1G28210.3 | 36.426 | 291 | 155 | 6 | 75 | 345 | 34 | 314 | 1.97e-55 | 187 |
Msa0632730 | AT1G28210.1 | 36.426 | 291 | 155 | 6 | 75 | 345 | 34 | 314 | 2.28e-55 | 187 |
Msa0632730 | AT1G28210.2 | 36.426 | 291 | 155 | 6 | 75 | 345 | 34 | 314 | 3.13e-55 | 187 |
Msa0632730 | AT2G22360.1 | 34.211 | 342 | 177 | 12 | 35 | 341 | 34 | 362 | 1.18e-43 | 157 |
Msa0632730 | AT4G39960.1 | 35.254 | 295 | 139 | 8 | 87 | 341 | 86 | 368 | 1.30e-41 | 152 |
Msa0632730 | AT4G39960.2 | 35.254 | 295 | 139 | 8 | 87 | 341 | 86 | 368 | 1.30e-41 | 152 |
Msa0632730 | AT1G80030.2 | 33.904 | 292 | 144 | 8 | 87 | 338 | 76 | 358 | 1.17e-37 | 142 |
Msa0632730 | AT1G80030.3 | 33.904 | 292 | 144 | 8 | 87 | 338 | 76 | 358 | 1.17e-37 | 142 |
Msa0632730 | AT1G80030.1 | 33.904 | 292 | 144 | 8 | 87 | 338 | 76 | 358 | 1.17e-37 | 142 |
Msa0632730 | AT1G80030.4 | 33.904 | 292 | 144 | 8 | 87 | 338 | 76 | 358 | 1.46e-37 | 141 |
Msa0632730 | AT3G17830.1 | 29.352 | 293 | 165 | 6 | 87 | 345 | 64 | 348 | 9.43e-35 | 134 |
Msa0632730 | AT5G22060.1 | 34.420 | 276 | 158 | 8 | 87 | 344 | 15 | 285 | 1.71e-30 | 121 |
Msa0632730 | AT3G44110.1 | 33.455 | 275 | 161 | 8 | 87 | 344 | 15 | 284 | 7.01e-28 | 114 |
Msa0632730 | AT3G44110.2 | 33.455 | 275 | 161 | 8 | 87 | 344 | 15 | 284 | 7.30e-28 | 112 |
Msa0632730 | AT3G62600.1 | 27.208 | 283 | 150 | 10 | 85 | 344 | 25 | 274 | 2.92e-13 | 70.5 |
Msa0632730 | AT5G25530.2 | 38.679 | 106 | 45 | 4 | 87 | 177 | 5 | 105 | 6.23e-13 | 69.7 |
Find 99 sgRNAs with CRISPR-Local
Find 798 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGCGGCTAATTCATATTT+TGG | 0.131687 | 4_3:+17168414 | Msa0632730:CDS |
TCCATTTCCTCAAATTAATT+AGG | 0.137163 | 4_3:+17167427 | Msa0632730:five_prime_UTR |
AATCCATCATCTACTGTTAT+TGG | 0.177439 | 4_3:+17167756 | Msa0632730:CDS |
TTGCATCGCTTACAAGTTTC+AGG | 0.178751 | 4_3:-17172000 | None:intergenic |
CCATTTCCTCAAATTAATTA+GGG | 0.221010 | 4_3:+17167428 | Msa0632730:five_prime_UTR |
TAGTGTTTCAAAGGGGTTAT+AGG | 0.275001 | 4_3:+17167727 | Msa0632730:CDS |
TAATTTGAGGAAATGGAAAT+TGG | 0.277674 | 4_3:-17167421 | None:intergenic |
TTTGATTGAATAGGTGAATT+GGG | 0.281655 | 4_3:-17167487 | None:intergenic |
CCCTAATTAATTTGAGGAAA+TGG | 0.291408 | 4_3:-17167428 | None:intergenic |
CACCACCTCCATGTACCTTT+AGG | 0.307308 | 4_3:-17172948 | None:intergenic |
TTTGAAGAACTGGTTGCTAT+TGG | 0.317603 | 4_3:+17168392 | Msa0632730:CDS |
GAAATAAAGAAAGCTTACTA+TGG | 0.322849 | 4_3:+17168830 | Msa0632730:CDS |
TTAGGAATTATCTTGCTTAT+CGG | 0.326118 | 4_3:+17173297 | Msa0632730:three_prime_UTR |
CTTTGTTCCTTTGACAACTT+TGG | 0.331164 | 4_3:-17172506 | None:intergenic |
GCCAGTAGGACGAATCATTT+GGG | 0.345959 | 4_3:-17167540 | None:intergenic |
ATAGTAAGCTTTCTTTATTT+CGG | 0.347885 | 4_3:-17168828 | None:intergenic |
ACCACCTCCATGTACCTTTA+GGG | 0.357234 | 4_3:-17172947 | None:intergenic |
TTGGAAGATTCTAGTAGAAC+CGG | 0.371487 | 4_3:-17167402 | None:intergenic |
TTGAAGAACTGGTTGCTATT+GGG | 0.371930 | 4_3:+17168393 | Msa0632730:CDS |
TGCCAGTAGGACGAATCATT+TGG | 0.376227 | 4_3:-17167541 | None:intergenic |
GTCCAGATGTTTGTACAAAC+TGG | 0.376510 | 4_3:+17172112 | Msa0632730:intron |
TGTAACTCATCCTCGCTTCC+CGG | 0.383507 | 4_3:+17167383 | Msa0632730:five_prime_UTR |
AGGAGCTATTACGATGTTCT+TGG | 0.393663 | 4_3:+17168782 | Msa0632730:CDS |
GGGGCAACTAGATCTATTCA+TGG | 0.412586 | 4_3:+17168435 | Msa0632730:CDS |
AGAAGTTACATTGGCATATG+AGG | 0.415080 | 4_3:+17170129 | Msa0632730:CDS |
AACAACCAAAGTGGTGGTTT+CGG | 0.424450 | 4_3:+17170919 | Msa0632730:CDS |
CTTTGACAACTTTGGCACCT+TGG | 0.428176 | 4_3:-17172498 | None:intergenic |
TCACCGGAACGGTTTGAATC+AGG | 0.428315 | 4_3:-17172979 | None:intergenic |
TGTTTGAAATGACAAAGTTT+TGG | 0.428748 | 4_3:-17171801 | None:intergenic |
TGTGCTACATGCAAGGGAAC+TGG | 0.431002 | 4_3:+17172157 | Msa0632730:CDS |
CCCCAAATGATTCGTCCTAC+TGG | 0.434059 | 4_3:+17167539 | Msa0632730:exon |
AAAGATGTGTACGGAATGAT+TGG | 0.438202 | 4_3:-17167606 | None:intergenic |
ATGGTGTTCATTTGAAGAAC+TGG | 0.440591 | 4_3:+17168382 | Msa0632730:CDS |
AACTAGATCTATTCATGGCT+CGG | 0.445228 | 4_3:+17168440 | Msa0632730:CDS |
CATTTGGGGAATTGAATTGA+AGG | 0.450855 | 4_3:-17167525 | None:intergenic |
CGATGTTCTTGGTGTGAGTA+AGG | 0.456412 | 4_3:+17168793 | Msa0632730:CDS |
GGTGGGAGTGGTCTTCCTCC+TGG | 0.467186 | 4_3:+17171970 | Msa0632730:intron |
TATATCAAGTAGTGTTTCAA+AGG | 0.471709 | 4_3:+17167718 | Msa0632730:CDS |
GAAAGAGTGATCGACGAGTA+AGG | 0.478803 | 4_3:-17167580 | None:intergenic |
GATCCTGATTCAAACCGTTC+CGG | 0.480511 | 4_3:+17172976 | Msa0632730:CDS |
GGTAGTAGTTATGCAACAAA+TGG | 0.489305 | 4_3:+17167777 | Msa0632730:CDS |
AAATAAAGAAAGCTTACTAT+GGG | 0.491279 | 4_3:+17168831 | Msa0632730:CDS |
TGCCTCCGAAACCACCACTT+TGG | 0.495412 | 4_3:-17170924 | None:intergenic |
ATATCAAGTAGTGTTTCAAA+GGG | 0.507204 | 4_3:+17167719 | Msa0632730:CDS |
TGTAAGCGATGCAAAGGGTC+AGG | 0.507844 | 4_3:+17172009 | Msa0632730:CDS |
GTCAAGTTGCATACTTATCC+TGG | 0.510591 | 4_3:+17172532 | Msa0632730:CDS |
GAAGTTTCAAGAAGTTACAT+TGG | 0.513562 | 4_3:+17170120 | Msa0632730:CDS |
CCACGGAACATCTGCTCGAA+AGG | 0.515788 | 4_3:-17170961 | None:intergenic |
CGAACTATTTCAGGTGGGAG+TGG | 0.521446 | 4_3:+17171958 | Msa0632730:intron |
TTGATTGAATAGGTGAATTG+GGG | 0.521791 | 4_3:-17167486 | None:intergenic |
ACCACTTTGGTTGTTTACAT+AGG | 0.523371 | 4_3:-17170911 | None:intergenic |
TGTGGTTGAACTATCTTTCA+CGG | 0.532096 | 4_3:+17171760 | Msa0632730:CDS |
AGTGGTGGTTTCGGAGGCAA+TGG | 0.540722 | 4_3:+17170928 | Msa0632730:CDS |
AAAACGTCAACAGTATGATC+AGG | 0.540871 | 4_3:+17170274 | Msa0632730:CDS |
TGATCTATATGCTACTATCA+AGG | 0.542920 | 4_3:+17172999 | Msa0632730:CDS |
CTACCAATAACAGTAGATGA+TGG | 0.550722 | 4_3:-17167759 | None:intergenic |
ACGAGTAAGGTGAGTGAAGA+GGG | 0.551659 | 4_3:-17167567 | None:intergenic |
AAGTACTTGTGCTACATGCA+AGG | 0.554627 | 4_3:+17172150 | Msa0632730:CDS |
ACTAGATCTATTCATGGCTC+GGG | 0.557340 | 4_3:+17168441 | Msa0632730:CDS |
GAAACTTGTAAGCGATGCAA+AGG | 0.557844 | 4_3:+17172003 | Msa0632730:CDS |
ACCCTAAAGGTACATGGAGG+TGG | 0.565389 | 4_3:+17172946 | Msa0632730:CDS |
ACAAACTGGAATATTCAGAA+TGG | 0.567594 | 4_3:+17172126 | Msa0632730:CDS |
AAGCGAGGATGAGTTACAGT+TGG | 0.568587 | 4_3:-17167378 | None:intergenic |
TGTCCACTTGCAGTTAGACA+TGG | 0.569909 | 4_3:+17168363 | Msa0632730:intron |
GGTGGTTTCGGAGGCAATGG+TGG | 0.572038 | 4_3:+17170931 | Msa0632730:CDS |
AAGAAAGCTTACTATGGGGT+AGG | 0.572919 | 4_3:+17168836 | Msa0632730:CDS |
CTAAAGGTACATGGAGGTGG+TGG | 0.575599 | 4_3:+17172949 | Msa0632730:CDS |
TCTTTCACGGAAGCTATCCA+AGG | 0.575784 | 4_3:+17171773 | Msa0632730:CDS |
GAACTGGTTGCTATTGGGAG+CGG | 0.575920 | 4_3:+17168398 | Msa0632730:CDS |
CAAGGTGCCAAAGTTGTCAA+AGG | 0.589611 | 4_3:+17172499 | Msa0632730:CDS |
ATTTGGCGGAGAAGATGTCA+AGG | 0.593689 | 4_3:+17171648 | Msa0632730:CDS |
AGTTTCTGCAAGTCTTGCCA+AGG | 0.595904 | 4_3:+17172481 | Msa0632730:CDS |
AACCAAAGTGGTGGTTTCGG+AGG | 0.598376 | 4_3:+17170922 | Msa0632730:CDS |
CATTTCCTCAAATTAATTAG+GGG | 0.600742 | 4_3:+17167429 | Msa0632730:five_prime_UTR |
AAACTTGTAAGCGATGCAAA+GGG | 0.601982 | 4_3:+17172004 | Msa0632730:CDS |
CCTTTCGAGCAGATGTTCCG+TGG | 0.604194 | 4_3:+17170961 | Msa0632730:CDS |
TCTAGTAGAACCGGGAAGCG+AGG | 0.604603 | 4_3:-17167393 | None:intergenic |
GATAGTAGCATATAGATCAC+CGG | 0.605615 | 4_3:-17172995 | None:intergenic |
AGACAACAATGAGACCCTAA+AGG | 0.610897 | 4_3:+17172933 | Msa0632730:CDS |
CGCAAATAAAGATGATCCTG+AGG | 0.611520 | 4_3:+17170090 | Msa0632730:intron |
GACGAGTAAGGTGAGTGAAG+AGG | 0.612764 | 4_3:-17167568 | None:intergenic |
AGTACTTGTGCTACATGCAA+GGG | 0.618060 | 4_3:+17172151 | Msa0632730:CDS |
AATGAGACCCTAAAGGTACA+TGG | 0.619370 | 4_3:+17172940 | Msa0632730:CDS |
TGGAAGATTCTAGTAGAACC+GGG | 0.621429 | 4_3:-17167401 | None:intergenic |
GTGAAGAGGGTGATGCCAGT+AGG | 0.632661 | 4_3:-17167554 | None:intergenic |
CTTTCACGGAAGCTATCCAA+GGG | 0.653887 | 4_3:+17171774 | Msa0632730:CDS |
ACTAAAATTAAATACACACA+TGG | 0.654532 | 4_3:-17173258 | None:intergenic |
TTCGAGCAGATGTTCCGTGG+TGG | 0.661342 | 4_3:+17170964 | Msa0632730:CDS |
TATGTAAACAACCAAAGTGG+TGG | 0.673516 | 4_3:+17170913 | Msa0632730:CDS |
GCGATGCAAAGGGTCAGGAG+TGG | 0.682796 | 4_3:+17172014 | Msa0632730:CDS |
AAGTCATTACATGGCCACCA+CGG | 0.693473 | 4_3:-17170978 | None:intergenic |
AATAAAGAAAGCTTACTATG+GGG | 0.700800 | 4_3:+17168832 | Msa0632730:CDS |
TAGCATATAGATCACCGGAA+CGG | 0.711908 | 4_3:-17172990 | None:intergenic |
AGAAGGATTAGATGTTCACG+TGG | 0.719072 | 4_3:+17173142 | Msa0632730:CDS |
TATCAAGTAGTGTTTCAAAG+GGG | 0.720594 | 4_3:+17167720 | Msa0632730:CDS |
GACGTGCTTTGTAATGCTTG+TGG | 0.721251 | 4_3:+17171824 | Msa0632730:CDS |
GCCTATGTAAACAACCAAAG+TGG | 0.723719 | 4_3:+17170910 | Msa0632730:CDS |
CCAGTAGGACGAATCATTTG+GGG | 0.727748 | 4_3:-17167539 | None:intergenic |
GAGACCCTAAAGGTACATGG+AGG | 0.766540 | 4_3:+17172943 | Msa0632730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACTTTTTTTTTTTTTTTTG+TGG | + | chr4_3:17167813-17167832 | Msa0632730:intron | 10.0% |
!!! | ACTTTTTTTTTTTTTTTTGT+GGG | + | chr4_3:17167814-17167833 | Msa0632730:intron | 10.0% |
!! | TTTAGTAAAAAATAAAAACA+TGG | - | chr4_3:17167919-17167938 | None:intergenic | 10.0% |
!! | ATAAAAATTGATTAAAAACT+AGG | + | chr4_3:17169236-17169255 | Msa0632730:intron | 10.0% |
!! | ATATTGAATTAAAAATATGA+TGG | - | chr4_3:17171184-17171203 | None:intergenic | 10.0% |
!! | ATAATATTAGATTCATATTT+GGG | - | chr4_3:17171573-17171592 | None:intergenic | 10.0% |
!! | AATAATATTAGATTCATATT+TGG | - | chr4_3:17171574-17171593 | None:intergenic | 10.0% |
!! | GAATTTATTTACAAAAATTA+AGG | - | chr4_3:17172336-17172355 | None:intergenic | 10.0% |
!!! | GTCATTAATTTATAATTTTT+AGG | + | chr4_3:17173279-17173298 | Msa0632730:exon | 10.0% |
!!! | TACTTTTTTTTTTTTTTTTG+TGG | + | chr4_3:17167813-17167832 | Msa0632730:intron | 10.0% |
!!! | ACTTTTTTTTTTTTTTTTGT+GGG | + | chr4_3:17167814-17167833 | Msa0632730:intron | 10.0% |
!! | TTTAGTAAAAAATAAAAACA+TGG | - | chr4_3:17167919-17167938 | None:intergenic | 10.0% |
!! | ATAAAAATTGATTAAAAACT+AGG | + | chr4_3:17169236-17169255 | Msa0632730:intron | 10.0% |
!! | ATATTGAATTAAAAATATGA+TGG | - | chr4_3:17171184-17171203 | None:intergenic | 10.0% |
!! | ATAATATTAGATTCATATTT+GGG | - | chr4_3:17171573-17171592 | None:intergenic | 10.0% |
!! | AATAATATTAGATTCATATT+TGG | - | chr4_3:17171574-17171593 | None:intergenic | 10.0% |
!! | GAATTTATTTACAAAAATTA+AGG | - | chr4_3:17172336-17172355 | None:intergenic | 10.0% |
!!! | GTCATTAATTTATAATTTTT+AGG | + | chr4_3:17173279-17173298 | Msa0632730:exon | 10.0% |
!!! | AAAAAATTTCATTTTTTTGC+AGG | + | chr4_3:17167695-17167714 | Msa0632730:intron | 15.0% |
!!! | TATATGATTACTTTATTTTC+AGG | - | chr4_3:17168974-17168993 | None:intergenic | 15.0% |
!! | TTTGATTCAAAATTGAAATT+AGG | + | chr4_3:17169304-17169323 | Msa0632730:intron | 15.0% |
!! | ATTGTATAACATAGTATTTA+TGG | - | chr4_3:17169843-17169862 | None:intergenic | 15.0% |
!!! | ATTTTCATTTTAATGTTTGT+AGG | + | chr4_3:17170235-17170254 | Msa0632730:intron | 15.0% |
!! | TATTTAACTCTTAAAAATCA+TGG | - | chr4_3:17171402-17171421 | None:intergenic | 15.0% |
!! | GATCATAAAGATTATTAATA+TGG | - | chr4_3:17171734-17171753 | None:intergenic | 15.0% |
!!! | AAAAAATTTCATTTTTTTGC+AGG | + | chr4_3:17167695-17167714 | Msa0632730:intron | 15.0% |
!!! | TATATGATTACTTTATTTTC+AGG | - | chr4_3:17168974-17168993 | None:intergenic | 15.0% |
!! | TTTGATTCAAAATTGAAATT+AGG | + | chr4_3:17169304-17169323 | Msa0632730:intron | 15.0% |
!! | ATTGTATAACATAGTATTTA+TGG | - | chr4_3:17169843-17169862 | None:intergenic | 15.0% |
!!! | ATTTTCATTTTAATGTTTGT+AGG | + | chr4_3:17170235-17170254 | Msa0632730:intron | 15.0% |
!! | TATTTAACTCTTAAAAATCA+TGG | - | chr4_3:17171402-17171421 | None:intergenic | 15.0% |
!! | GATCATAAAGATTATTAATA+TGG | - | chr4_3:17171734-17171753 | None:intergenic | 15.0% |
!!! | TTTGAAGATTTTGATTGAAT+AGG | - | chr4_3:17167499-17167518 | None:intergenic | 20.0% |
!!! | ATTTTTGTTTGTATGAACTA+TGG | + | chr4_3:17167656-17167675 | Msa0632730:intron | 20.0% |
!!! | TTTTTACTAAAGATCCAATT+TGG | + | chr4_3:17167928-17167947 | Msa0632730:intron | 20.0% |
!!! | TTAGCTATTATTTTTTGTCT+GGG | - | chr4_3:17167986-17168005 | None:intergenic | 20.0% |
!!! | TTTAGCTATTATTTTTTGTC+TGG | - | chr4_3:17167987-17168006 | None:intergenic | 20.0% |
!!! | CTATTTTAGATGTTATTTCT+TGG | + | chr4_3:17168110-17168129 | Msa0632730:intron | 20.0% |
!! | ATTGTAAGAAAAACAAGAAA+AGG | - | chr4_3:17168244-17168263 | None:intergenic | 20.0% |
!!! | AAAGCTTAACAACATTTTTT+CGG | - | chr4_3:17168293-17168312 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAAGCAAGACA+TGG | - | chr4_3:17168494-17168513 | None:intergenic | 20.0% |
!!! | ATAGTAAGCTTTCTTTATTT+CGG | - | chr4_3:17168831-17168850 | None:intergenic | 20.0% |
!! | AAATAAAGAAAGCTTACTAT+GGG | + | chr4_3:17168831-17168850 | Msa0632730:CDS | 20.0% |
!! | TGAATCTATGTATTGAAATA+TGG | + | chr4_3:17168884-17168903 | Msa0632730:intron | 20.0% |
!! | GAATCTATGTATTGAAATAT+GGG | + | chr4_3:17168885-17168904 | Msa0632730:intron | 20.0% |
!! | ATCTATACCTATATATCAAA+GGG | - | chr4_3:17169633-17169652 | None:intergenic | 20.0% |
!! | AACAAAGTTTCAAAGAAAAT+AGG | - | chr4_3:17170315-17170334 | None:intergenic | 20.0% |
!! | ATTCTAATGAATGAAAAAAG+TGG | + | chr4_3:17170411-17170430 | Msa0632730:intron | 20.0% |
!!! | AATAGTATGATTTAAGTTGT+TGG | + | chr4_3:17170466-17170485 | Msa0632730:intron | 20.0% |
!!! | TGTTTTTGTATTTTATTGAG+TGG | + | chr4_3:17170805-17170824 | Msa0632730:intron | 20.0% |
!!! | GTTTTTGTATTTTATTGAGT+GGG | + | chr4_3:17170806-17170825 | Msa0632730:intron | 20.0% |
!! | TAAAGTAAATCAAATGAAAG+AGG | - | chr4_3:17170859-17170878 | None:intergenic | 20.0% |
!!! | TTAATTTTTCATGAATGTGT+AGG | + | chr4_3:17170876-17170895 | Msa0632730:intron | 20.0% |
!! | CATATAGAAGAAAATCAATA+TGG | - | chr4_3:17172225-17172244 | None:intergenic | 20.0% |
!! | TAAAGTGAAATATGACTATA+TGG | + | chr4_3:17172417-17172436 | Msa0632730:intron | 20.0% |
!! | AAAGTGAAATATGACTATAT+GGG | + | chr4_3:17172418-17172437 | Msa0632730:intron | 20.0% |
!! | AATTCGAAATAATAATTACC+AGG | - | chr4_3:17172553-17172572 | None:intergenic | 20.0% |
!!! | TTTCTTTATGTCATTTGAAT+TGG | + | chr4_3:17172742-17172761 | Msa0632730:intron | 20.0% |
!! | CCTTAAAAGAAATAATAAGA+GGG | - | chr4_3:17172861-17172880 | None:intergenic | 20.0% |
!! | ACCTTAAAAGAAATAATAAG+AGG | - | chr4_3:17172862-17172881 | None:intergenic | 20.0% |
!! | ACTAAAATTAAATACACACA+TGG | - | chr4_3:17173261-17173280 | None:intergenic | 20.0% |
!!! | TTTGAAGATTTTGATTGAAT+AGG | - | chr4_3:17167499-17167518 | None:intergenic | 20.0% |
!!! | ATTTTTGTTTGTATGAACTA+TGG | + | chr4_3:17167656-17167675 | Msa0632730:intron | 20.0% |
!!! | TTTTTACTAAAGATCCAATT+TGG | + | chr4_3:17167928-17167947 | Msa0632730:intron | 20.0% |
!!! | TTAGCTATTATTTTTTGTCT+GGG | - | chr4_3:17167986-17168005 | None:intergenic | 20.0% |
!!! | TTTAGCTATTATTTTTTGTC+TGG | - | chr4_3:17167987-17168006 | None:intergenic | 20.0% |
!!! | CTATTTTAGATGTTATTTCT+TGG | + | chr4_3:17168110-17168129 | Msa0632730:intron | 20.0% |
!! | ATTGTAAGAAAAACAAGAAA+AGG | - | chr4_3:17168244-17168263 | None:intergenic | 20.0% |
!!! | AAAGCTTAACAACATTTTTT+CGG | - | chr4_3:17168293-17168312 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAAGCAAGACA+TGG | - | chr4_3:17168494-17168513 | None:intergenic | 20.0% |
!!! | ATAGTAAGCTTTCTTTATTT+CGG | - | chr4_3:17168831-17168850 | None:intergenic | 20.0% |
!! | AAATAAAGAAAGCTTACTAT+GGG | + | chr4_3:17168831-17168850 | Msa0632730:CDS | 20.0% |
!! | TGAATCTATGTATTGAAATA+TGG | + | chr4_3:17168884-17168903 | Msa0632730:intron | 20.0% |
!! | GAATCTATGTATTGAAATAT+GGG | + | chr4_3:17168885-17168904 | Msa0632730:intron | 20.0% |
!! | ATCTATACCTATATATCAAA+GGG | - | chr4_3:17169633-17169652 | None:intergenic | 20.0% |
!! | AACAAAGTTTCAAAGAAAAT+AGG | - | chr4_3:17170315-17170334 | None:intergenic | 20.0% |
!! | ATTCTAATGAATGAAAAAAG+TGG | + | chr4_3:17170411-17170430 | Msa0632730:intron | 20.0% |
!!! | AATAGTATGATTTAAGTTGT+TGG | + | chr4_3:17170466-17170485 | Msa0632730:intron | 20.0% |
!!! | TGTTTTTGTATTTTATTGAG+TGG | + | chr4_3:17170805-17170824 | Msa0632730:intron | 20.0% |
!!! | GTTTTTGTATTTTATTGAGT+GGG | + | chr4_3:17170806-17170825 | Msa0632730:intron | 20.0% |
!! | TAAAGTAAATCAAATGAAAG+AGG | - | chr4_3:17170859-17170878 | None:intergenic | 20.0% |
!!! | TTAATTTTTCATGAATGTGT+AGG | + | chr4_3:17170876-17170895 | Msa0632730:intron | 20.0% |
!! | CATATAGAAGAAAATCAATA+TGG | - | chr4_3:17172225-17172244 | None:intergenic | 20.0% |
!! | TAAAGTGAAATATGACTATA+TGG | + | chr4_3:17172417-17172436 | Msa0632730:intron | 20.0% |
!! | AAAGTGAAATATGACTATAT+GGG | + | chr4_3:17172418-17172437 | Msa0632730:intron | 20.0% |
!! | AATTCGAAATAATAATTACC+AGG | - | chr4_3:17172553-17172572 | None:intergenic | 20.0% |
!!! | TTTCTTTATGTCATTTGAAT+TGG | + | chr4_3:17172742-17172761 | Msa0632730:intron | 20.0% |
!! | CCTTAAAAGAAATAATAAGA+GGG | - | chr4_3:17172861-17172880 | None:intergenic | 20.0% |
!! | ACCTTAAAAGAAATAATAAG+AGG | - | chr4_3:17172862-17172881 | None:intergenic | 20.0% |
!! | ACTAAAATTAAATACACACA+TGG | - | chr4_3:17173261-17173280 | None:intergenic | 20.0% |
! | TAATTTGAGGAAATGGAAAT+TGG | - | chr4_3:17167424-17167443 | None:intergenic | 25.0% |
! | TCCATTTCCTCAAATTAATT+AGG | + | chr4_3:17167427-17167446 | Msa0632730:five_prime_UTR | 25.0% |
! | CCATTTCCTCAAATTAATTA+GGG | + | chr4_3:17167428-17167447 | Msa0632730:five_prime_UTR | 25.0% |
! | CATTTCCTCAAATTAATTAG+GGG | + | chr4_3:17167429-17167448 | Msa0632730:five_prime_UTR | 25.0% |
!! | AAAAACCCCTAATTAATTTG+AGG | - | chr4_3:17167437-17167456 | None:intergenic | 25.0% |
!! | AATTAATTAGGGGTTTTTCT+AGG | + | chr4_3:17167439-17167458 | Msa0632730:five_prime_UTR | 25.0% |
!! | ATTAATTAGGGGTTTTTCTA+GGG | + | chr4_3:17167440-17167459 | Msa0632730:five_prime_UTR | 25.0% |
! | TTTGATTGAATAGGTGAATT+GGG | - | chr4_3:17167490-17167509 | None:intergenic | 25.0% |
!!! | TTTTGATTGAATAGGTGAAT+TGG | - | chr4_3:17167491-17167510 | None:intergenic | 25.0% |
! | ACTATGGTTTAACAAATTTG+TGG | + | chr4_3:17167672-17167691 | Msa0632730:intron | 25.0% |
! | TATATCAAGTAGTGTTTCAA+AGG | + | chr4_3:17167718-17167737 | Msa0632730:CDS | 25.0% |
! | ATATCAAGTAGTGTTTCAAA+GGG | + | chr4_3:17167719-17167738 | Msa0632730:CDS | 25.0% |
!!! | GAGGAACAAATTTGATTTTT+TGG | + | chr4_3:17168164-17168183 | Msa0632730:intron | 25.0% |
!!! | GAACAAATTTGATTTTTTGG+TGG | + | chr4_3:17168167-17168186 | Msa0632730:intron | 25.0% |
!!! | TTTTGGTGGTATAGTTATTT+TGG | + | chr4_3:17168181-17168200 | Msa0632730:intron | 25.0% |
!!! | TGTTTGTGTTATTTATAGCT+TGG | + | chr4_3:17168581-17168600 | Msa0632730:intron | 25.0% |
! | GAAATAAAGAAAGCTTACTA+TGG | + | chr4_3:17168830-17168849 | Msa0632730:CDS | 25.0% |
! | AATAAAGAAAGCTTACTATG+GGG | + | chr4_3:17168832-17168851 | Msa0632730:CDS | 25.0% |
! | TCATGTATTTGACAATTATG+AGG | - | chr4_3:17168867-17168886 | None:intergenic | 25.0% |
! | AAGAAGTTTAACAATGCAAT+GGG | - | chr4_3:17168936-17168955 | None:intergenic | 25.0% |
!! | GTAATCATATATTTTGTGAG+TGG | + | chr4_3:17168983-17169002 | Msa0632730:intron | 25.0% |
!! | TTTTATTGGGTGAAATACAT+GGG | + | chr4_3:17169440-17169459 | Msa0632730:intron | 25.0% |
! | TTCATTTAAACTCTTGAGTA+GGG | - | chr4_3:17169588-17169607 | None:intergenic | 25.0% |
! | TACTCAAGAGTTTAAATGAA+GGG | + | chr4_3:17169588-17169607 | Msa0632730:intron | 25.0% |
! | GTTTAAATGAAGGGTAAATT+TGG | + | chr4_3:17169597-17169616 | Msa0632730:intron | 25.0% |
! | CATCTATACCTATATATCAA+AGG | - | chr4_3:17169634-17169653 | None:intergenic | 25.0% |
!! | TGGTTTTCATCAGATTATAT+AGG | + | chr4_3:17169700-17169719 | Msa0632730:intron | 25.0% |
! | TAAGATAGATATCTGACTTT+GGG | - | chr4_3:17170181-17170200 | None:intergenic | 25.0% |
! | TTAAGATAGATATCTGACTT+TGG | - | chr4_3:17170182-17170201 | None:intergenic | 25.0% |
!!! | TTAATGTTTGTAGGTTTTGA+AGG | + | chr4_3:17170244-17170263 | Msa0632730:intron | 25.0% |
! | TATATCTGAGTTTAGTGAAA+AGG | - | chr4_3:17170354-17170373 | None:intergenic | 25.0% |
! | AGTAGCTCAAAATAAATTTC+CGG | - | chr4_3:17170508-17170527 | None:intergenic | 25.0% |
! | AAGAAGAAAACTTCAATACT+AGG | + | chr4_3:17170637-17170656 | Msa0632730:intron | 25.0% |
!!! | TGTATTTGTTTCTATGTTTG+TGG | + | chr4_3:17170736-17170755 | Msa0632730:intron | 25.0% |
!! | CATATTTTGTCAAAAGAAAC+TGG | + | chr4_3:17171106-17171125 | Msa0632730:intron | 25.0% |
! | TAAAAATATGATGGTTGTGT+AGG | - | chr4_3:17171175-17171194 | None:intergenic | 25.0% |
! | AACTCTTAAAAATCATGGTT+GGG | - | chr4_3:17171397-17171416 | None:intergenic | 25.0% |
! | TAACTCTTAAAAATCATGGT+TGG | - | chr4_3:17171398-17171417 | None:intergenic | 25.0% |
!! | CATATTTGGGATTAATTTGA+CGG | - | chr4_3:17171560-17171579 | None:intergenic | 25.0% |
!! | TTATTTCTCAATTCCTTTCA+TGG | + | chr4_3:17171589-17171608 | Msa0632730:intron | 25.0% |
!!! | AGCTTTTTCCATCAAAAATT+TGG | + | chr4_3:17171631-17171650 | Msa0632730:CDS | 25.0% |
!! | TTTTTCCATCAAAAATTTGG+CGG | + | chr4_3:17171634-17171653 | Msa0632730:CDS | 25.0% |
! | ACATTATTAAGCATATGCTA+AGG | + | chr4_3:17171692-17171711 | Msa0632730:intron | 25.0% |
! | CATTATTAAGCATATGCTAA+GGG | + | chr4_3:17171693-17171712 | Msa0632730:intron | 25.0% |
!!! | TGTTTGAAATGACAAAGTTT+TGG | - | chr4_3:17171804-17171823 | None:intergenic | 25.0% |
! | AAGTTAACAGATAATGACTA+TGG | - | chr4_3:17172374-17172393 | None:intergenic | 25.0% |
! | AGTCATTATCTGTTAACTTA+TGG | + | chr4_3:17172375-17172394 | Msa0632730:intron | 25.0% |
! | TATCTGTTAACTTATGGATA+TGG | + | chr4_3:17172381-17172400 | Msa0632730:intron | 25.0% |
!!! | GGTTTTTAATCTTTTGTTGT+TGG | + | chr4_3:17172452-17172471 | Msa0632730:intron | 25.0% |
! | TACATTACAAGTTACAACAA+TGG | - | chr4_3:17172585-17172604 | None:intergenic | 25.0% |
!! | ATTGTTGTAACTTGTAATGT+AGG | + | chr4_3:17172584-17172603 | Msa0632730:intron | 25.0% |
! | AAGTTTGACAGAAATCAATA+TGG | - | chr4_3:17172661-17172680 | None:intergenic | 25.0% |
!!! | ATATTGATTTCTGTCAAACT+TGG | + | chr4_3:17172660-17172679 | Msa0632730:intron | 25.0% |
!!! | CCCTCTTATTATTTCTTTTA+AGG | + | chr4_3:17172858-17172877 | Msa0632730:intron | 25.0% |
!!! | TATGATTTTTTCCATTTGCA+GGG | + | chr4_3:17172908-17172927 | Msa0632730:intron | 25.0% |
! | TAATTTGAGGAAATGGAAAT+TGG | - | chr4_3:17167424-17167443 | None:intergenic | 25.0% |
! | TCCATTTCCTCAAATTAATT+AGG | + | chr4_3:17167427-17167446 | Msa0632730:five_prime_UTR | 25.0% |
! | CCATTTCCTCAAATTAATTA+GGG | + | chr4_3:17167428-17167447 | Msa0632730:five_prime_UTR | 25.0% |
! | CATTTCCTCAAATTAATTAG+GGG | + | chr4_3:17167429-17167448 | Msa0632730:five_prime_UTR | 25.0% |
!! | AAAAACCCCTAATTAATTTG+AGG | - | chr4_3:17167437-17167456 | None:intergenic | 25.0% |
!! | AATTAATTAGGGGTTTTTCT+AGG | + | chr4_3:17167439-17167458 | Msa0632730:five_prime_UTR | 25.0% |
!! | ATTAATTAGGGGTTTTTCTA+GGG | + | chr4_3:17167440-17167459 | Msa0632730:five_prime_UTR | 25.0% |
! | TTTGATTGAATAGGTGAATT+GGG | - | chr4_3:17167490-17167509 | None:intergenic | 25.0% |
!!! | TTTTGATTGAATAGGTGAAT+TGG | - | chr4_3:17167491-17167510 | None:intergenic | 25.0% |
! | ACTATGGTTTAACAAATTTG+TGG | + | chr4_3:17167672-17167691 | Msa0632730:intron | 25.0% |
! | TATATCAAGTAGTGTTTCAA+AGG | + | chr4_3:17167718-17167737 | Msa0632730:CDS | 25.0% |
! | ATATCAAGTAGTGTTTCAAA+GGG | + | chr4_3:17167719-17167738 | Msa0632730:CDS | 25.0% |
!!! | GAGGAACAAATTTGATTTTT+TGG | + | chr4_3:17168164-17168183 | Msa0632730:intron | 25.0% |
!!! | GAACAAATTTGATTTTTTGG+TGG | + | chr4_3:17168167-17168186 | Msa0632730:intron | 25.0% |
!!! | TTTTGGTGGTATAGTTATTT+TGG | + | chr4_3:17168181-17168200 | Msa0632730:intron | 25.0% |
!!! | TGTTTGTGTTATTTATAGCT+TGG | + | chr4_3:17168581-17168600 | Msa0632730:intron | 25.0% |
! | GAAATAAAGAAAGCTTACTA+TGG | + | chr4_3:17168830-17168849 | Msa0632730:CDS | 25.0% |
! | AATAAAGAAAGCTTACTATG+GGG | + | chr4_3:17168832-17168851 | Msa0632730:CDS | 25.0% |
! | TCATGTATTTGACAATTATG+AGG | - | chr4_3:17168867-17168886 | None:intergenic | 25.0% |
! | AAGAAGTTTAACAATGCAAT+GGG | - | chr4_3:17168936-17168955 | None:intergenic | 25.0% |
!! | GTAATCATATATTTTGTGAG+TGG | + | chr4_3:17168983-17169002 | Msa0632730:intron | 25.0% |
!! | TTTTATTGGGTGAAATACAT+GGG | + | chr4_3:17169440-17169459 | Msa0632730:intron | 25.0% |
! | TTCATTTAAACTCTTGAGTA+GGG | - | chr4_3:17169588-17169607 | None:intergenic | 25.0% |
! | TACTCAAGAGTTTAAATGAA+GGG | + | chr4_3:17169588-17169607 | Msa0632730:intron | 25.0% |
! | GTTTAAATGAAGGGTAAATT+TGG | + | chr4_3:17169597-17169616 | Msa0632730:intron | 25.0% |
! | CATCTATACCTATATATCAA+AGG | - | chr4_3:17169634-17169653 | None:intergenic | 25.0% |
!! | TGGTTTTCATCAGATTATAT+AGG | + | chr4_3:17169700-17169719 | Msa0632730:intron | 25.0% |
! | TAAGATAGATATCTGACTTT+GGG | - | chr4_3:17170181-17170200 | None:intergenic | 25.0% |
! | TTAAGATAGATATCTGACTT+TGG | - | chr4_3:17170182-17170201 | None:intergenic | 25.0% |
!!! | TTAATGTTTGTAGGTTTTGA+AGG | + | chr4_3:17170244-17170263 | Msa0632730:intron | 25.0% |
! | TATATCTGAGTTTAGTGAAA+AGG | - | chr4_3:17170354-17170373 | None:intergenic | 25.0% |
! | AGTAGCTCAAAATAAATTTC+CGG | - | chr4_3:17170508-17170527 | None:intergenic | 25.0% |
! | AAGAAGAAAACTTCAATACT+AGG | + | chr4_3:17170637-17170656 | Msa0632730:intron | 25.0% |
!!! | TGTATTTGTTTCTATGTTTG+TGG | + | chr4_3:17170736-17170755 | Msa0632730:intron | 25.0% |
!! | CATATTTTGTCAAAAGAAAC+TGG | + | chr4_3:17171106-17171125 | Msa0632730:intron | 25.0% |
! | TAAAAATATGATGGTTGTGT+AGG | - | chr4_3:17171175-17171194 | None:intergenic | 25.0% |
! | AACTCTTAAAAATCATGGTT+GGG | - | chr4_3:17171397-17171416 | None:intergenic | 25.0% |
! | TAACTCTTAAAAATCATGGT+TGG | - | chr4_3:17171398-17171417 | None:intergenic | 25.0% |
!! | CATATTTGGGATTAATTTGA+CGG | - | chr4_3:17171560-17171579 | None:intergenic | 25.0% |
!! | TTATTTCTCAATTCCTTTCA+TGG | + | chr4_3:17171589-17171608 | Msa0632730:intron | 25.0% |
!!! | AGCTTTTTCCATCAAAAATT+TGG | + | chr4_3:17171631-17171650 | Msa0632730:CDS | 25.0% |
!! | TTTTTCCATCAAAAATTTGG+CGG | + | chr4_3:17171634-17171653 | Msa0632730:CDS | 25.0% |
! | ACATTATTAAGCATATGCTA+AGG | + | chr4_3:17171692-17171711 | Msa0632730:intron | 25.0% |
! | CATTATTAAGCATATGCTAA+GGG | + | chr4_3:17171693-17171712 | Msa0632730:intron | 25.0% |
!!! | TGTTTGAAATGACAAAGTTT+TGG | - | chr4_3:17171804-17171823 | None:intergenic | 25.0% |
! | AAGTTAACAGATAATGACTA+TGG | - | chr4_3:17172374-17172393 | None:intergenic | 25.0% |
! | AGTCATTATCTGTTAACTTA+TGG | + | chr4_3:17172375-17172394 | Msa0632730:intron | 25.0% |
! | TATCTGTTAACTTATGGATA+TGG | + | chr4_3:17172381-17172400 | Msa0632730:intron | 25.0% |
!!! | GGTTTTTAATCTTTTGTTGT+TGG | + | chr4_3:17172452-17172471 | Msa0632730:intron | 25.0% |
! | TACATTACAAGTTACAACAA+TGG | - | chr4_3:17172585-17172604 | None:intergenic | 25.0% |
!! | ATTGTTGTAACTTGTAATGT+AGG | + | chr4_3:17172584-17172603 | Msa0632730:intron | 25.0% |
! | AAGTTTGACAGAAATCAATA+TGG | - | chr4_3:17172661-17172680 | None:intergenic | 25.0% |
!!! | ATATTGATTTCTGTCAAACT+TGG | + | chr4_3:17172660-17172679 | Msa0632730:intron | 25.0% |
!!! | CCCTCTTATTATTTCTTTTA+AGG | + | chr4_3:17172858-17172877 | Msa0632730:intron | 25.0% |
!!! | TATGATTTTTTCCATTTGCA+GGG | + | chr4_3:17172908-17172927 | Msa0632730:intron | 25.0% |
! | CCCTAATTAATTTGAGGAAA+TGG | - | chr4_3:17167431-17167450 | None:intergenic | 30.0% |
TTGATTGAATAGGTGAATTG+GGG | - | chr4_3:17167489-17167508 | None:intergenic | 30.0% | |
AAGAAGAAGAAAGATGTGTA+CGG | - | chr4_3:17167618-17167637 | None:intergenic | 30.0% | |
TATCAAGTAGTGTTTCAAAG+GGG | + | chr4_3:17167720-17167739 | Msa0632730:CDS | 30.0% | |
AATCCATCATCTACTGTTAT+TGG | + | chr4_3:17167756-17167775 | Msa0632730:CDS | 30.0% | |
CTATGAAACAAAAATACTCC+CGG | + | chr4_3:17167851-17167870 | Msa0632730:intron | 30.0% | |
TATGAAACAAAAATACTCCC+GGG | + | chr4_3:17167852-17167871 | Msa0632730:intron | 30.0% | |
AAAATTACGAAGGACCAAAT+TGG | - | chr4_3:17167945-17167964 | None:intergenic | 30.0% | |
! | AGTCGTTGACATTTTTATAC+AGG | + | chr4_3:17168008-17168027 | Msa0632730:intron | 30.0% |
! | GTCGTTGACATTTTTATACA+GGG | + | chr4_3:17168009-17168028 | Msa0632730:intron | 30.0% |
! | TCGTTGACATTTTTATACAG+GGG | + | chr4_3:17168010-17168029 | Msa0632730:intron | 30.0% |
TTTGACACGTTATAAACAGA+GGG | - | chr4_3:17168045-17168064 | None:intergenic | 30.0% | |
! | TTTTGACACGTTATAAACAG+AGG | - | chr4_3:17168046-17168065 | None:intergenic | 30.0% |
!! | TTTAGATGTTATTTCTTGGC+TGG | + | chr4_3:17168114-17168133 | Msa0632730:intron | 30.0% |
!! | TTAGATGTTATTTCTTGGCT+GGG | + | chr4_3:17168115-17168134 | Msa0632730:intron | 30.0% |
!!! | GTGGTATAGTTATTTTGGAA+AGG | + | chr4_3:17168186-17168205 | Msa0632730:intron | 30.0% |
!!! | CAACATTTTTTCGGAAAAGA+TGG | - | chr4_3:17168284-17168303 | None:intergenic | 30.0% |
AAAAAAAAAGCAAGACATGG+AGG | - | chr4_3:17168491-17168510 | None:intergenic | 30.0% | |
TTATTGCTCATGAAATCACA+CGG | + | chr4_3:17168523-17168542 | Msa0632730:intron | 30.0% | |
ACTACTTTCTATTGCATACT+AGG | + | chr4_3:17168613-17168632 | Msa0632730:intron | 30.0% | |
GAAGAAGTTTAACAATGCAA+TGG | - | chr4_3:17168937-17168956 | None:intergenic | 30.0% | |
! | AAGCTTAATTTTTGCCATGA+TGG | - | chr4_3:17169152-17169171 | None:intergenic | 30.0% |
GTATTTCACCCAATAAAAGA+GGG | - | chr4_3:17169438-17169457 | None:intergenic | 30.0% | |
TGTATTTCACCCAATAAAAG+AGG | - | chr4_3:17169439-17169458 | None:intergenic | 30.0% | |
! | CTTTTATTGGGTGAAATACA+TGG | + | chr4_3:17169439-17169458 | Msa0632730:intron | 30.0% |
!!! | AAGTCCATCATTTTAGAACT+AGG | - | chr4_3:17169484-17169503 | None:intergenic | 30.0% |
CTTCATTTAAACTCTTGAGT+AGG | - | chr4_3:17169589-17169608 | None:intergenic | 30.0% | |
CTACTCAAGAGTTTAAATGA+AGG | + | chr4_3:17169587-17169606 | Msa0632730:intron | 30.0% | |
ATGGTATCCCTTTGATATAT+AGG | + | chr4_3:17169623-17169642 | Msa0632730:intron | 30.0% | |
! | CACATTTGCGATTTTTGATA+CGG | + | chr4_3:17169658-17169677 | Msa0632730:intron | 30.0% |
AGTTCATGTCAAAGAAGAAA+GGG | - | chr4_3:17169896-17169915 | None:intergenic | 30.0% | |
AAGTTCATGTCAAAGAAGAA+AGG | - | chr4_3:17169897-17169916 | None:intergenic | 30.0% | |
!! | TGACATGAACTTTTTAAGCA+AGG | + | chr4_3:17169905-17169924 | Msa0632730:intron | 30.0% |
GAAGTTTCAAGAAGTTACAT+TGG | + | chr4_3:17170120-17170139 | Msa0632730:CDS | 30.0% | |
ATACCAGCAGTCATTAATTT+GGG | - | chr4_3:17170215-17170234 | None:intergenic | 30.0% | |
TATACCAGCAGTCATTAATT+TGG | - | chr4_3:17170216-17170235 | None:intergenic | 30.0% | |
TCAAAGAAAATAGGCAGTAA+TGG | - | chr4_3:17170306-17170325 | None:intergenic | 30.0% | |
AATGTGAAGTTTAATGCAGA+TGG | + | chr4_3:17170439-17170458 | Msa0632730:intron | 30.0% | |
ACTTGATAGAGAAAGAAAGA+CGG | + | chr4_3:17170525-17170544 | Msa0632730:intron | 30.0% | |
!!! | GTTTTAGTTTTGCTTTCTTG+TGG | + | chr4_3:17170571-17170590 | Msa0632730:intron | 30.0% |
! | TTTTTCATGAATGTGTAGGT+TGG | + | chr4_3:17170880-17170899 | Msa0632730:intron | 30.0% |
GTAATCAAACAGATCTAAAC+AGG | - | chr4_3:17171274-17171293 | None:intergenic | 30.0% | |
ACTGTTAAAGAGTTCCAAAT+CGG | + | chr4_3:17171292-17171311 | Msa0632730:intron | 30.0% | |
CTGAACATGTGTTTATAAGT+GGG | + | chr4_3:17171327-17171346 | Msa0632730:intron | 30.0% | |
TGAACATGTGTTTATAAGTG+GGG | + | chr4_3:17171328-17171347 | Msa0632730:intron | 30.0% | |
AGAATACAAAATACCAGTGA+AGG | - | chr4_3:17171880-17171899 | None:intergenic | 30.0% | |
! | ACTGGTATTTTGTATTCTGT+TGG | + | chr4_3:17171882-17171901 | Msa0632730:intron | 30.0% |
! | CTGGTATTTTGTATTCTGTT+GGG | + | chr4_3:17171883-17171902 | Msa0632730:intron | 30.0% |
ACAAACTGGAATATTCAGAA+TGG | + | chr4_3:17172126-17172145 | Msa0632730:CDS | 30.0% | |
GTGTTTATGTGTGTATTCTT+TGG | - | chr4_3:17172778-17172797 | None:intergenic | 30.0% | |
TTGTATTTATTCTCTGCTGT+TGG | + | chr4_3:17172825-17172844 | Msa0632730:intron | 30.0% | |
!!! | GTATGATTTTTTCCATTTGC+AGG | + | chr4_3:17172907-17172926 | Msa0632730:intron | 30.0% |
TGATCTATATGCTACTATCA+AGG | + | chr4_3:17172999-17173018 | Msa0632730:CDS | 30.0% | |
!! | TATACACTTTTTGCAGGTTA+GGG | + | chr4_3:17173100-17173119 | Msa0632730:intron | 30.0% |
!! | AACGATTTTACTTGGTTTTC+TGG | + | chr4_3:17173216-17173235 | Msa0632730:CDS | 30.0% |
! | CCCTAATTAATTTGAGGAAA+TGG | - | chr4_3:17167431-17167450 | None:intergenic | 30.0% |
TTGATTGAATAGGTGAATTG+GGG | - | chr4_3:17167489-17167508 | None:intergenic | 30.0% | |
AAGAAGAAGAAAGATGTGTA+CGG | - | chr4_3:17167618-17167637 | None:intergenic | 30.0% | |
TATCAAGTAGTGTTTCAAAG+GGG | + | chr4_3:17167720-17167739 | Msa0632730:CDS | 30.0% | |
AATCCATCATCTACTGTTAT+TGG | + | chr4_3:17167756-17167775 | Msa0632730:CDS | 30.0% | |
CTATGAAACAAAAATACTCC+CGG | + | chr4_3:17167851-17167870 | Msa0632730:intron | 30.0% | |
TATGAAACAAAAATACTCCC+GGG | + | chr4_3:17167852-17167871 | Msa0632730:intron | 30.0% | |
AAAATTACGAAGGACCAAAT+TGG | - | chr4_3:17167945-17167964 | None:intergenic | 30.0% | |
! | AGTCGTTGACATTTTTATAC+AGG | + | chr4_3:17168008-17168027 | Msa0632730:intron | 30.0% |
! | GTCGTTGACATTTTTATACA+GGG | + | chr4_3:17168009-17168028 | Msa0632730:intron | 30.0% |
! | TCGTTGACATTTTTATACAG+GGG | + | chr4_3:17168010-17168029 | Msa0632730:intron | 30.0% |
TTTGACACGTTATAAACAGA+GGG | - | chr4_3:17168045-17168064 | None:intergenic | 30.0% | |
! | TTTTGACACGTTATAAACAG+AGG | - | chr4_3:17168046-17168065 | None:intergenic | 30.0% |
!! | TTTAGATGTTATTTCTTGGC+TGG | + | chr4_3:17168114-17168133 | Msa0632730:intron | 30.0% |
!! | TTAGATGTTATTTCTTGGCT+GGG | + | chr4_3:17168115-17168134 | Msa0632730:intron | 30.0% |
!!! | GTGGTATAGTTATTTTGGAA+AGG | + | chr4_3:17168186-17168205 | Msa0632730:intron | 30.0% |
!!! | CAACATTTTTTCGGAAAAGA+TGG | - | chr4_3:17168284-17168303 | None:intergenic | 30.0% |
AAAAAAAAAGCAAGACATGG+AGG | - | chr4_3:17168491-17168510 | None:intergenic | 30.0% | |
TTATTGCTCATGAAATCACA+CGG | + | chr4_3:17168523-17168542 | Msa0632730:intron | 30.0% | |
ACTACTTTCTATTGCATACT+AGG | + | chr4_3:17168613-17168632 | Msa0632730:intron | 30.0% | |
GAAGAAGTTTAACAATGCAA+TGG | - | chr4_3:17168937-17168956 | None:intergenic | 30.0% | |
! | AAGCTTAATTTTTGCCATGA+TGG | - | chr4_3:17169152-17169171 | None:intergenic | 30.0% |
GTATTTCACCCAATAAAAGA+GGG | - | chr4_3:17169438-17169457 | None:intergenic | 30.0% | |
TGTATTTCACCCAATAAAAG+AGG | - | chr4_3:17169439-17169458 | None:intergenic | 30.0% | |
! | CTTTTATTGGGTGAAATACA+TGG | + | chr4_3:17169439-17169458 | Msa0632730:intron | 30.0% |
!!! | AAGTCCATCATTTTAGAACT+AGG | - | chr4_3:17169484-17169503 | None:intergenic | 30.0% |
CTTCATTTAAACTCTTGAGT+AGG | - | chr4_3:17169589-17169608 | None:intergenic | 30.0% | |
CTACTCAAGAGTTTAAATGA+AGG | + | chr4_3:17169587-17169606 | Msa0632730:intron | 30.0% | |
ATGGTATCCCTTTGATATAT+AGG | + | chr4_3:17169623-17169642 | Msa0632730:intron | 30.0% | |
! | CACATTTGCGATTTTTGATA+CGG | + | chr4_3:17169658-17169677 | Msa0632730:intron | 30.0% |
AGTTCATGTCAAAGAAGAAA+GGG | - | chr4_3:17169896-17169915 | None:intergenic | 30.0% | |
AAGTTCATGTCAAAGAAGAA+AGG | - | chr4_3:17169897-17169916 | None:intergenic | 30.0% | |
!! | TGACATGAACTTTTTAAGCA+AGG | + | chr4_3:17169905-17169924 | Msa0632730:intron | 30.0% |
GAAGTTTCAAGAAGTTACAT+TGG | + | chr4_3:17170120-17170139 | Msa0632730:CDS | 30.0% | |
ATACCAGCAGTCATTAATTT+GGG | - | chr4_3:17170215-17170234 | None:intergenic | 30.0% | |
TATACCAGCAGTCATTAATT+TGG | - | chr4_3:17170216-17170235 | None:intergenic | 30.0% | |
TCAAAGAAAATAGGCAGTAA+TGG | - | chr4_3:17170306-17170325 | None:intergenic | 30.0% | |
AATGTGAAGTTTAATGCAGA+TGG | + | chr4_3:17170439-17170458 | Msa0632730:intron | 30.0% | |
ACTTGATAGAGAAAGAAAGA+CGG | + | chr4_3:17170525-17170544 | Msa0632730:intron | 30.0% | |
!!! | GTTTTAGTTTTGCTTTCTTG+TGG | + | chr4_3:17170571-17170590 | Msa0632730:intron | 30.0% |
! | TTTTTCATGAATGTGTAGGT+TGG | + | chr4_3:17170880-17170899 | Msa0632730:intron | 30.0% |
GTAATCAAACAGATCTAAAC+AGG | - | chr4_3:17171274-17171293 | None:intergenic | 30.0% | |
ACTGTTAAAGAGTTCCAAAT+CGG | + | chr4_3:17171292-17171311 | Msa0632730:intron | 30.0% | |
CTGAACATGTGTTTATAAGT+GGG | + | chr4_3:17171327-17171346 | Msa0632730:intron | 30.0% | |
TGAACATGTGTTTATAAGTG+GGG | + | chr4_3:17171328-17171347 | Msa0632730:intron | 30.0% | |
AGAATACAAAATACCAGTGA+AGG | - | chr4_3:17171880-17171899 | None:intergenic | 30.0% | |
! | ACTGGTATTTTGTATTCTGT+TGG | + | chr4_3:17171882-17171901 | Msa0632730:intron | 30.0% |
! | CTGGTATTTTGTATTCTGTT+GGG | + | chr4_3:17171883-17171902 | Msa0632730:intron | 30.0% |
ACAAACTGGAATATTCAGAA+TGG | + | chr4_3:17172126-17172145 | Msa0632730:CDS | 30.0% | |
GTGTTTATGTGTGTATTCTT+TGG | - | chr4_3:17172778-17172797 | None:intergenic | 30.0% | |
TTGTATTTATTCTCTGCTGT+TGG | + | chr4_3:17172825-17172844 | Msa0632730:intron | 30.0% | |
!!! | GTATGATTTTTTCCATTTGC+AGG | + | chr4_3:17172907-17172926 | Msa0632730:intron | 30.0% |
TGATCTATATGCTACTATCA+AGG | + | chr4_3:17172999-17173018 | Msa0632730:CDS | 30.0% | |
!! | TATACACTTTTTGCAGGTTA+GGG | + | chr4_3:17173100-17173119 | Msa0632730:intron | 30.0% |
!! | AACGATTTTACTTGGTTTTC+TGG | + | chr4_3:17173216-17173235 | Msa0632730:CDS | 30.0% |
TTGGAAGATTCTAGTAGAAC+CGG | - | chr4_3:17167405-17167424 | None:intergenic | 35.0% | |
! | TAGGTGAATTGGGGATTTTT+GGG | - | chr4_3:17167480-17167499 | None:intergenic | 35.0% |
! | ATAGGTGAATTGGGGATTTT+TGG | - | chr4_3:17167481-17167500 | None:intergenic | 35.0% |
CATTTGGGGAATTGAATTGA+AGG | - | chr4_3:17167528-17167547 | None:intergenic | 35.0% | |
AAAGATGTGTACGGAATGAT+TGG | - | chr4_3:17167609-17167628 | None:intergenic | 35.0% | |
TAGTGTTTCAAAGGGGTTAT+AGG | + | chr4_3:17167727-17167746 | Msa0632730:CDS | 35.0% | |
CTACCAATAACAGTAGATGA+TGG | - | chr4_3:17167762-17167781 | None:intergenic | 35.0% | |
GGTAGTAGTTATGCAACAAA+TGG | + | chr4_3:17167777-17167796 | Msa0632730:CDS | 35.0% | |
ATGAAACAAAAATACTCCCG+GGG | + | chr4_3:17167853-17167872 | Msa0632730:intron | 35.0% | |
TAAAAACATGGTGCTCAATG+AGG | - | chr4_3:17167907-17167926 | None:intergenic | 35.0% | |
TTCATGACAGTTTCATTCAG+GGG | - | chr4_3:17168090-17168109 | None:intergenic | 35.0% | |
GTTCATGACAGTTTCATTCA+GGG | - | chr4_3:17168091-17168110 | None:intergenic | 35.0% | |
AGTTCATGACAGTTTCATTC+AGG | - | chr4_3:17168092-17168111 | None:intergenic | 35.0% | |
ATGGTGTTCATTTGAAGAAC+TGG | + | chr4_3:17168382-17168401 | Msa0632730:CDS | 35.0% | |
TTTGAAGAACTGGTTGCTAT+TGG | + | chr4_3:17168392-17168411 | Msa0632730:CDS | 35.0% | |
! | TTGAAGAACTGGTTGCTATT+GGG | + | chr4_3:17168393-17168412 | Msa0632730:CDS | 35.0% |
! | GAGCGGCTAATTCATATTTT+GGG | + | chr4_3:17168415-17168434 | Msa0632730:CDS | 35.0% |
! | AGCGGCTAATTCATATTTTG+GGG | + | chr4_3:17168416-17168435 | Msa0632730:CDS | 35.0% |
AACTAGATCTATTCATGGCT+CGG | + | chr4_3:17168440-17168459 | Msa0632730:CDS | 35.0% | |
CATACTAGGATAGTAGATGT+AGG | + | chr4_3:17168627-17168646 | Msa0632730:intron | 35.0% | |
ACGATGCTGCAAAATAGTTT+GGG | - | chr4_3:17168757-17168776 | None:intergenic | 35.0% | |
AACGATGCTGCAAAATAGTT+TGG | - | chr4_3:17168758-17168777 | None:intergenic | 35.0% | |
! | AAACTATTTTGCAGCATCGT+TGG | + | chr4_3:17168757-17168776 | Msa0632730:intron | 35.0% |
TCAACCATTTCCTATGATGT+GGG | + | chr4_3:17169010-17169029 | Msa0632730:intron | 35.0% | |
! | CTTAATTTTTGCCATGATGG+AGG | - | chr4_3:17169149-17169168 | None:intergenic | 35.0% |
GAAATTAGGATACAACAACC+AGG | + | chr4_3:17169318-17169337 | Msa0632730:intron | 35.0% | |
! | TCTAACACTCCCTCTTTTAT+TGG | + | chr4_3:17169426-17169445 | Msa0632730:intron | 35.0% |
! | CTAACACTCCCTCTTTTATT+GGG | + | chr4_3:17169427-17169446 | Msa0632730:intron | 35.0% |
TGCATGTGTGTAACATCATT+TGG | - | chr4_3:17169512-17169531 | None:intergenic | 35.0% | |
! | CTTTTCAACACTCGCTTATT+GGG | - | chr4_3:17169540-17169559 | None:intergenic | 35.0% |
! | TCTTTTCAACACTCGCTTAT+TGG | - | chr4_3:17169541-17169560 | None:intergenic | 35.0% |
TGAAGGGTAAATTTGGAAGA+TGG | + | chr4_3:17169604-17169623 | Msa0632730:intron | 35.0% | |
! | GAGTTGTGTTTTATGTGTTC+TGG | + | chr4_3:17169680-17169699 | Msa0632730:intron | 35.0% |
GAAGAAAGGGAAAAGGTAAA+GGG | - | chr4_3:17169883-17169902 | None:intergenic | 35.0% | |
AGAAGAAAGGGAAAAGGTAA+AGG | - | chr4_3:17169884-17169903 | None:intergenic | 35.0% | |
TGTCAAAGAAGAAAGGGAAA+AGG | - | chr4_3:17169890-17169909 | None:intergenic | 35.0% | |
TCTTTGCAAGCTACAGAATA+TGG | - | chr4_3:17170057-17170076 | None:intergenic | 35.0% | |
AGAAGTTACATTGGCATATG+AGG | + | chr4_3:17170129-17170148 | Msa0632730:CDS | 35.0% | |
TATCCCAAATTAATGACTGC+TGG | + | chr4_3:17170209-17170228 | Msa0632730:intron | 35.0% | |
!!! | TGTTTGTAGGTTTTGAAGGA+TGG | + | chr4_3:17170248-17170267 | Msa0632730:intron | 35.0% |
!!! | GTTTGTAGGTTTTGAAGGAT+GGG | + | chr4_3:17170249-17170268 | Msa0632730:intron | 35.0% |
!!! | TTTGTAGGTTTTGAAGGATG+GGG | + | chr4_3:17170250-17170269 | Msa0632730:intron | 35.0% |
AAAACGTCAACAGTATGATC+AGG | + | chr4_3:17170274-17170293 | Msa0632730:CDS | 35.0% | |
TGAAGTTTAATGCAGATGGA+GGG | + | chr4_3:17170443-17170462 | Msa0632730:intron | 35.0% | |
TTCTTTCCAATGAATCCTAG+GGG | - | chr4_3:17170622-17170641 | None:intergenic | 35.0% | |
CTTCTTTCCAATGAATCCTA+GGG | - | chr4_3:17170623-17170642 | None:intergenic | 35.0% | |
TCTTCTTTCCAATGAATCCT+AGG | - | chr4_3:17170624-17170643 | None:intergenic | 35.0% | |
ACCACTTTGGTTGTTTACAT+AGG | - | chr4_3:17170914-17170933 | None:intergenic | 35.0% | |
TATGTAAACAACCAAAGTGG+TGG | + | chr4_3:17170913-17170932 | Msa0632730:CDS | 35.0% | |
GAATGTAGCAAGTCATTACA+TGG | - | chr4_3:17170990-17171009 | None:intergenic | 35.0% | |
CCACTTATAAACACATGTTC+AGG | - | chr4_3:17171329-17171348 | None:intergenic | 35.0% | |
CCTGAACATGTGTTTATAAG+TGG | + | chr4_3:17171326-17171345 | Msa0632730:intron | 35.0% | |
GAACATGTGTTTATAAGTGG+GGG | + | chr4_3:17171329-17171348 | Msa0632730:intron | 35.0% | |
AATATCCTGATCACCATGAA+AGG | - | chr4_3:17171605-17171624 | None:intergenic | 35.0% | |
ATCTTTATGATCACAGACTG+TGG | + | chr4_3:17171742-17171761 | Msa0632730:intron | 35.0% | |
TGTGGTTGAACTATCTTTCA+CGG | + | chr4_3:17171760-17171779 | Msa0632730:CDS | 35.0% | |
! | AGTGAGATGTGTTGATATCA+AGG | - | chr4_3:17171933-17171952 | None:intergenic | 35.0% |
AAACTTGTAAGCGATGCAAA+GGG | + | chr4_3:17172004-17172023 | Msa0632730:CDS | 35.0% | |
TCAATTGAACAACACTTCTC+AGG | - | chr4_3:17172079-17172098 | None:intergenic | 35.0% | |
TTCCAGTTTGTACAAACATC+TGG | - | chr4_3:17172117-17172136 | None:intergenic | 35.0% | |
GGGAACTGGAAAAATTGTAT+CGG | + | chr4_3:17172171-17172190 | Msa0632730:CDS | 35.0% | |
! | CTGGAAAAATTGTATCGGTA+TGG | + | chr4_3:17172176-17172195 | Msa0632730:intron | 35.0% |
TGTTCTTGTATCCATTTACG+TGG | + | chr4_3:17172284-17172303 | Msa0632730:intron | 35.0% | |
CTGTTAACTTATGGATATGG+TGG | + | chr4_3:17172384-17172403 | Msa0632730:intron | 35.0% | |
ACTATATGGGAATGTACTGA+TGG | + | chr4_3:17172431-17172450 | Msa0632730:intron | 35.0% | |
CTTTGTTCCTTTGACAACTT+TGG | - | chr4_3:17172509-17172528 | None:intergenic | 35.0% | |
TAATGTAGGCCATGGTTATA+TGG | + | chr4_3:17172598-17172617 | Msa0632730:intron | 35.0% | |
GATAGTAGCATATAGATCAC+CGG | - | chr4_3:17172998-17173017 | None:intergenic | 35.0% | |
!! | TTCCTCTATACACTTTTTGC+AGG | + | chr4_3:17173094-17173113 | Msa0632730:intron | 35.0% |
! | AACCTGCAAAAAGTGTATAG+AGG | - | chr4_3:17173099-17173118 | None:intergenic | 35.0% |
!! | CTATACACTTTTTGCAGGTT+AGG | + | chr4_3:17173099-17173118 | Msa0632730:intron | 35.0% |
!!! | TGCTGTTTTAAGTTTCACTC+AGG | + | chr4_3:17173166-17173185 | Msa0632730:CDS | 35.0% |
! | TGTTGAGCAACGATTTTACT+TGG | + | chr4_3:17173208-17173227 | Msa0632730:CDS | 35.0% |
TTGGAAGATTCTAGTAGAAC+CGG | - | chr4_3:17167405-17167424 | None:intergenic | 35.0% | |
! | TAGGTGAATTGGGGATTTTT+GGG | - | chr4_3:17167480-17167499 | None:intergenic | 35.0% |
! | ATAGGTGAATTGGGGATTTT+TGG | - | chr4_3:17167481-17167500 | None:intergenic | 35.0% |
CATTTGGGGAATTGAATTGA+AGG | - | chr4_3:17167528-17167547 | None:intergenic | 35.0% | |
AAAGATGTGTACGGAATGAT+TGG | - | chr4_3:17167609-17167628 | None:intergenic | 35.0% | |
TAGTGTTTCAAAGGGGTTAT+AGG | + | chr4_3:17167727-17167746 | Msa0632730:CDS | 35.0% | |
CTACCAATAACAGTAGATGA+TGG | - | chr4_3:17167762-17167781 | None:intergenic | 35.0% | |
GGTAGTAGTTATGCAACAAA+TGG | + | chr4_3:17167777-17167796 | Msa0632730:CDS | 35.0% | |
ATGAAACAAAAATACTCCCG+GGG | + | chr4_3:17167853-17167872 | Msa0632730:intron | 35.0% | |
TAAAAACATGGTGCTCAATG+AGG | - | chr4_3:17167907-17167926 | None:intergenic | 35.0% | |
TTCATGACAGTTTCATTCAG+GGG | - | chr4_3:17168090-17168109 | None:intergenic | 35.0% | |
GTTCATGACAGTTTCATTCA+GGG | - | chr4_3:17168091-17168110 | None:intergenic | 35.0% | |
AGTTCATGACAGTTTCATTC+AGG | - | chr4_3:17168092-17168111 | None:intergenic | 35.0% | |
ATGGTGTTCATTTGAAGAAC+TGG | + | chr4_3:17168382-17168401 | Msa0632730:CDS | 35.0% | |
TTTGAAGAACTGGTTGCTAT+TGG | + | chr4_3:17168392-17168411 | Msa0632730:CDS | 35.0% | |
! | TTGAAGAACTGGTTGCTATT+GGG | + | chr4_3:17168393-17168412 | Msa0632730:CDS | 35.0% |
! | GAGCGGCTAATTCATATTTT+GGG | + | chr4_3:17168415-17168434 | Msa0632730:CDS | 35.0% |
! | AGCGGCTAATTCATATTTTG+GGG | + | chr4_3:17168416-17168435 | Msa0632730:CDS | 35.0% |
AACTAGATCTATTCATGGCT+CGG | + | chr4_3:17168440-17168459 | Msa0632730:CDS | 35.0% | |
CATACTAGGATAGTAGATGT+AGG | + | chr4_3:17168627-17168646 | Msa0632730:intron | 35.0% | |
ACGATGCTGCAAAATAGTTT+GGG | - | chr4_3:17168757-17168776 | None:intergenic | 35.0% | |
AACGATGCTGCAAAATAGTT+TGG | - | chr4_3:17168758-17168777 | None:intergenic | 35.0% | |
! | AAACTATTTTGCAGCATCGT+TGG | + | chr4_3:17168757-17168776 | Msa0632730:intron | 35.0% |
TCAACCATTTCCTATGATGT+GGG | + | chr4_3:17169010-17169029 | Msa0632730:intron | 35.0% | |
! | CTTAATTTTTGCCATGATGG+AGG | - | chr4_3:17169149-17169168 | None:intergenic | 35.0% |
GAAATTAGGATACAACAACC+AGG | + | chr4_3:17169318-17169337 | Msa0632730:intron | 35.0% | |
! | TCTAACACTCCCTCTTTTAT+TGG | + | chr4_3:17169426-17169445 | Msa0632730:intron | 35.0% |
! | CTAACACTCCCTCTTTTATT+GGG | + | chr4_3:17169427-17169446 | Msa0632730:intron | 35.0% |
TGCATGTGTGTAACATCATT+TGG | - | chr4_3:17169512-17169531 | None:intergenic | 35.0% | |
! | CTTTTCAACACTCGCTTATT+GGG | - | chr4_3:17169540-17169559 | None:intergenic | 35.0% |
! | TCTTTTCAACACTCGCTTAT+TGG | - | chr4_3:17169541-17169560 | None:intergenic | 35.0% |
TGAAGGGTAAATTTGGAAGA+TGG | + | chr4_3:17169604-17169623 | Msa0632730:intron | 35.0% | |
! | GAGTTGTGTTTTATGTGTTC+TGG | + | chr4_3:17169680-17169699 | Msa0632730:intron | 35.0% |
GAAGAAAGGGAAAAGGTAAA+GGG | - | chr4_3:17169883-17169902 | None:intergenic | 35.0% | |
AGAAGAAAGGGAAAAGGTAA+AGG | - | chr4_3:17169884-17169903 | None:intergenic | 35.0% | |
TGTCAAAGAAGAAAGGGAAA+AGG | - | chr4_3:17169890-17169909 | None:intergenic | 35.0% | |
TCTTTGCAAGCTACAGAATA+TGG | - | chr4_3:17170057-17170076 | None:intergenic | 35.0% | |
AGAAGTTACATTGGCATATG+AGG | + | chr4_3:17170129-17170148 | Msa0632730:CDS | 35.0% | |
TATCCCAAATTAATGACTGC+TGG | + | chr4_3:17170209-17170228 | Msa0632730:intron | 35.0% | |
!!! | TGTTTGTAGGTTTTGAAGGA+TGG | + | chr4_3:17170248-17170267 | Msa0632730:intron | 35.0% |
!!! | GTTTGTAGGTTTTGAAGGAT+GGG | + | chr4_3:17170249-17170268 | Msa0632730:intron | 35.0% |
!!! | TTTGTAGGTTTTGAAGGATG+GGG | + | chr4_3:17170250-17170269 | Msa0632730:intron | 35.0% |
AAAACGTCAACAGTATGATC+AGG | + | chr4_3:17170274-17170293 | Msa0632730:CDS | 35.0% | |
TGAAGTTTAATGCAGATGGA+GGG | + | chr4_3:17170443-17170462 | Msa0632730:intron | 35.0% | |
TTCTTTCCAATGAATCCTAG+GGG | - | chr4_3:17170622-17170641 | None:intergenic | 35.0% | |
CTTCTTTCCAATGAATCCTA+GGG | - | chr4_3:17170623-17170642 | None:intergenic | 35.0% | |
TCTTCTTTCCAATGAATCCT+AGG | - | chr4_3:17170624-17170643 | None:intergenic | 35.0% | |
ACCACTTTGGTTGTTTACAT+AGG | - | chr4_3:17170914-17170933 | None:intergenic | 35.0% | |
TATGTAAACAACCAAAGTGG+TGG | + | chr4_3:17170913-17170932 | Msa0632730:CDS | 35.0% | |
GAATGTAGCAAGTCATTACA+TGG | - | chr4_3:17170990-17171009 | None:intergenic | 35.0% | |
CCACTTATAAACACATGTTC+AGG | - | chr4_3:17171329-17171348 | None:intergenic | 35.0% | |
CCTGAACATGTGTTTATAAG+TGG | + | chr4_3:17171326-17171345 | Msa0632730:intron | 35.0% | |
GAACATGTGTTTATAAGTGG+GGG | + | chr4_3:17171329-17171348 | Msa0632730:intron | 35.0% | |
AATATCCTGATCACCATGAA+AGG | - | chr4_3:17171605-17171624 | None:intergenic | 35.0% | |
ATCTTTATGATCACAGACTG+TGG | + | chr4_3:17171742-17171761 | Msa0632730:intron | 35.0% | |
TGTGGTTGAACTATCTTTCA+CGG | + | chr4_3:17171760-17171779 | Msa0632730:CDS | 35.0% | |
! | AGTGAGATGTGTTGATATCA+AGG | - | chr4_3:17171933-17171952 | None:intergenic | 35.0% |
AAACTTGTAAGCGATGCAAA+GGG | + | chr4_3:17172004-17172023 | Msa0632730:CDS | 35.0% | |
TCAATTGAACAACACTTCTC+AGG | - | chr4_3:17172079-17172098 | None:intergenic | 35.0% | |
TTCCAGTTTGTACAAACATC+TGG | - | chr4_3:17172117-17172136 | None:intergenic | 35.0% | |
GGGAACTGGAAAAATTGTAT+CGG | + | chr4_3:17172171-17172190 | Msa0632730:CDS | 35.0% | |
! | CTGGAAAAATTGTATCGGTA+TGG | + | chr4_3:17172176-17172195 | Msa0632730:intron | 35.0% |
TGTTCTTGTATCCATTTACG+TGG | + | chr4_3:17172284-17172303 | Msa0632730:intron | 35.0% | |
CTGTTAACTTATGGATATGG+TGG | + | chr4_3:17172384-17172403 | Msa0632730:intron | 35.0% | |
ACTATATGGGAATGTACTGA+TGG | + | chr4_3:17172431-17172450 | Msa0632730:intron | 35.0% | |
CTTTGTTCCTTTGACAACTT+TGG | - | chr4_3:17172509-17172528 | None:intergenic | 35.0% | |
TAATGTAGGCCATGGTTATA+TGG | + | chr4_3:17172598-17172617 | Msa0632730:intron | 35.0% | |
GATAGTAGCATATAGATCAC+CGG | - | chr4_3:17172998-17173017 | None:intergenic | 35.0% | |
!! | TTCCTCTATACACTTTTTGC+AGG | + | chr4_3:17173094-17173113 | Msa0632730:intron | 35.0% |
! | AACCTGCAAAAAGTGTATAG+AGG | - | chr4_3:17173099-17173118 | None:intergenic | 35.0% |
!! | CTATACACTTTTTGCAGGTT+AGG | + | chr4_3:17173099-17173118 | Msa0632730:intron | 35.0% |
!!! | TGCTGTTTTAAGTTTCACTC+AGG | + | chr4_3:17173166-17173185 | Msa0632730:CDS | 35.0% |
! | TGTTGAGCAACGATTTTACT+TGG | + | chr4_3:17173208-17173227 | Msa0632730:CDS | 35.0% |
TGGAAGATTCTAGTAGAACC+GGG | - | chr4_3:17167404-17167423 | None:intergenic | 40.0% | |
! | AGGTGAATTGGGGATTTTTG+GGG | - | chr4_3:17167479-17167498 | None:intergenic | 40.0% |
GAGTCGCGATAAAATTACGA+AGG | - | chr4_3:17167955-17167974 | None:intergenic | 40.0% | |
! | GGAGCGGCTAATTCATATTT+TGG | + | chr4_3:17168414-17168433 | Msa0632730:CDS | 40.0% |
ACTAGATCTATTCATGGCTC+GGG | + | chr4_3:17168441-17168460 | Msa0632730:CDS | 40.0% | |
CAACTATGCACAAGAAAGCA+AGG | - | chr4_3:17168693-17168712 | None:intergenic | 40.0% | |
AGGAGCTATTACGATGTTCT+TGG | + | chr4_3:17168782-17168801 | Msa0632730:CDS | 40.0% | |
AAGAAAGCTTACTATGGGGT+AGG | + | chr4_3:17168836-17168855 | Msa0632730:CDS | 40.0% | |
CTCAACCATTTCCTATGATG+TGG | + | chr4_3:17169009-17169028 | Msa0632730:intron | 40.0% | |
TCATCCCACATCATAGGAAA+TGG | - | chr4_3:17169017-17169036 | None:intergenic | 40.0% | |
ACACTGACCTGTTATTCTGT+CGG | + | chr4_3:17169100-17169119 | Msa0632730:intron | 40.0% | |
AGAAAAGCCGACAGAATAAC+AGG | - | chr4_3:17169110-17169129 | None:intergenic | 40.0% | |
! | CTTTTCTCGAATACCATAGC+TGG | + | chr4_3:17169123-17169142 | Msa0632730:intron | 40.0% |
!! | AGCGAGTGTTGAAAAGAGAT+TGG | + | chr4_3:17169544-17169563 | Msa0632730:intron | 40.0% |
TCAAGCCCTATTACACTAAG+TGG | + | chr4_3:17169792-17169811 | Msa0632730:intron | 40.0% | |
CAAGCCCTATTACACTAAGT+GGG | + | chr4_3:17169793-17169812 | Msa0632730:intron | 40.0% | |
AAGCCCTATTACACTAAGTG+GGG | + | chr4_3:17169794-17169813 | Msa0632730:intron | 40.0% | |
!!! | AAGGCTTGGTTTTTGGTTGT+TGG | + | chr4_3:17170007-17170026 | Msa0632730:intron | 40.0% |
! | CATCTTTATTTGCGTCTGGA+TGG | - | chr4_3:17170084-17170103 | None:intergenic | 40.0% |
! | GGATCATCTTTATTTGCGTC+TGG | - | chr4_3:17170088-17170107 | None:intergenic | 40.0% |
CGCAAATAAAGATGATCCTG+AGG | + | chr4_3:17170090-17170109 | Msa0632730:intron | 40.0% | |
! | TGAAACTTCTTTTCAGCCTC+AGG | - | chr4_3:17170109-17170128 | None:intergenic | 40.0% |
GTGAAGTTTAATGCAGATGG+AGG | + | chr4_3:17170442-17170461 | Msa0632730:intron | 40.0% | |
! | TAAGTTGTTGGCCTCTTTCA+TGG | + | chr4_3:17170478-17170497 | Msa0632730:intron | 40.0% |
TGATAGAGAAAGAAAGACGG+AGG | + | chr4_3:17170528-17170547 | Msa0632730:intron | 40.0% | |
GATAGAGAAAGAAAGACGGA+GGG | + | chr4_3:17170529-17170548 | Msa0632730:intron | 40.0% | |
TCTTTCCAATGAATCCTAGG+GGG | - | chr4_3:17170621-17170640 | None:intergenic | 40.0% | |
TGAAAGAGGCAGTAGATACT+AGG | - | chr4_3:17170845-17170864 | None:intergenic | 40.0% | |
GCCTATGTAAACAACCAAAG+TGG | + | chr4_3:17170910-17170929 | Msa0632730:CDS | 40.0% | |
AACAACCAAAGTGGTGGTTT+CGG | + | chr4_3:17170919-17170938 | Msa0632730:CDS | 40.0% | |
ATGGTTGTGTAGGATTGCTT+AGG | - | chr4_3:17171165-17171184 | None:intergenic | 40.0% | |
GAATGTGCTGAAACTTCAGT+CGG | + | chr4_3:17171243-17171262 | Msa0632730:intron | 40.0% | |
GTTCCAAATCGGACAAAAGA+TGG | + | chr4_3:17171303-17171322 | Msa0632730:intron | 40.0% | |
CTAACACAACCCCACAAAAT+CGG | - | chr4_3:17171373-17171392 | None:intergenic | 40.0% | |
CAATTCCTTTCATGGTGATC+AGG | + | chr4_3:17171597-17171616 | Msa0632730:intron | 40.0% | |
! | CTTCTCCGCCAAATTTTTGA+TGG | - | chr4_3:17171642-17171661 | None:intergenic | 40.0% |
TATGAATTGTCGTCCTTCAC+TGG | + | chr4_3:17171864-17171883 | Msa0632730:intron | 40.0% | |
!!! | CAAGTTTCAGGTTTTGTACC+AGG | - | chr4_3:17171991-17172010 | None:intergenic | 40.0% |
TTGCATCGCTTACAAGTTTC+AGG | - | chr4_3:17172003-17172022 | None:intergenic | 40.0% | |
GAAACTTGTAAGCGATGCAA+AGG | + | chr4_3:17172003-17172022 | Msa0632730:CDS | 40.0% | |
GTCCAGATGTTTGTACAAAC+TGG | + | chr4_3:17172112-17172131 | Msa0632730:intron | 40.0% | |
AAGTACTTGTGCTACATGCA+AGG | + | chr4_3:17172150-17172169 | Msa0632730:CDS | 40.0% | |
AGTACTTGTGCTACATGCAA+GGG | + | chr4_3:17172151-17172170 | Msa0632730:CDS | 40.0% | |
! | GTCAAGTTGCATACTTATCC+TGG | + | chr4_3:17172532-17172551 | Msa0632730:CDS | 40.0% |
! | GTAACTTGTAATGTAGGCCA+TGG | + | chr4_3:17172590-17172609 | Msa0632730:intron | 40.0% |
CTCTGTATGCCATATAACCA+TGG | - | chr4_3:17172610-17172629 | None:intergenic | 40.0% | |
! | TTGCTGTTGCTAAGTTCACT+TGG | - | chr4_3:17172699-17172718 | None:intergenic | 40.0% |
TTGTTGTCTATCCCTGCAAA+TGG | - | chr4_3:17172922-17172941 | None:intergenic | 40.0% | |
AGACAACAATGAGACCCTAA+AGG | + | chr4_3:17172933-17172952 | Msa0632730:CDS | 40.0% | |
! | AATGAGACCCTAAAGGTACA+TGG | + | chr4_3:17172940-17172959 | Msa0632730:CDS | 40.0% |
TAGCATATAGATCACCGGAA+CGG | - | chr4_3:17172993-17173012 | None:intergenic | 40.0% | |
AATCCTTCTCTGCGAAAAAC+AGG | - | chr4_3:17173131-17173150 | None:intergenic | 40.0% | |
AGAAGGATTAGATGTTCACG+TGG | + | chr4_3:17173142-17173161 | Msa0632730:CDS | 40.0% | |
TGGAAGATTCTAGTAGAACC+GGG | - | chr4_3:17167404-17167423 | None:intergenic | 40.0% | |
! | AGGTGAATTGGGGATTTTTG+GGG | - | chr4_3:17167479-17167498 | None:intergenic | 40.0% |
GAGTCGCGATAAAATTACGA+AGG | - | chr4_3:17167955-17167974 | None:intergenic | 40.0% | |
! | GGAGCGGCTAATTCATATTT+TGG | + | chr4_3:17168414-17168433 | Msa0632730:CDS | 40.0% |
ACTAGATCTATTCATGGCTC+GGG | + | chr4_3:17168441-17168460 | Msa0632730:CDS | 40.0% | |
CAACTATGCACAAGAAAGCA+AGG | - | chr4_3:17168693-17168712 | None:intergenic | 40.0% | |
AGGAGCTATTACGATGTTCT+TGG | + | chr4_3:17168782-17168801 | Msa0632730:CDS | 40.0% | |
AAGAAAGCTTACTATGGGGT+AGG | + | chr4_3:17168836-17168855 | Msa0632730:CDS | 40.0% | |
CTCAACCATTTCCTATGATG+TGG | + | chr4_3:17169009-17169028 | Msa0632730:intron | 40.0% | |
TCATCCCACATCATAGGAAA+TGG | - | chr4_3:17169017-17169036 | None:intergenic | 40.0% | |
ACACTGACCTGTTATTCTGT+CGG | + | chr4_3:17169100-17169119 | Msa0632730:intron | 40.0% | |
AGAAAAGCCGACAGAATAAC+AGG | - | chr4_3:17169110-17169129 | None:intergenic | 40.0% | |
! | CTTTTCTCGAATACCATAGC+TGG | + | chr4_3:17169123-17169142 | Msa0632730:intron | 40.0% |
!! | AGCGAGTGTTGAAAAGAGAT+TGG | + | chr4_3:17169544-17169563 | Msa0632730:intron | 40.0% |
TCAAGCCCTATTACACTAAG+TGG | + | chr4_3:17169792-17169811 | Msa0632730:intron | 40.0% | |
CAAGCCCTATTACACTAAGT+GGG | + | chr4_3:17169793-17169812 | Msa0632730:intron | 40.0% | |
AAGCCCTATTACACTAAGTG+GGG | + | chr4_3:17169794-17169813 | Msa0632730:intron | 40.0% | |
!!! | AAGGCTTGGTTTTTGGTTGT+TGG | + | chr4_3:17170007-17170026 | Msa0632730:intron | 40.0% |
! | CATCTTTATTTGCGTCTGGA+TGG | - | chr4_3:17170084-17170103 | None:intergenic | 40.0% |
! | GGATCATCTTTATTTGCGTC+TGG | - | chr4_3:17170088-17170107 | None:intergenic | 40.0% |
CGCAAATAAAGATGATCCTG+AGG | + | chr4_3:17170090-17170109 | Msa0632730:intron | 40.0% | |
! | TGAAACTTCTTTTCAGCCTC+AGG | - | chr4_3:17170109-17170128 | None:intergenic | 40.0% |
GTGAAGTTTAATGCAGATGG+AGG | + | chr4_3:17170442-17170461 | Msa0632730:intron | 40.0% | |
! | TAAGTTGTTGGCCTCTTTCA+TGG | + | chr4_3:17170478-17170497 | Msa0632730:intron | 40.0% |
TGATAGAGAAAGAAAGACGG+AGG | + | chr4_3:17170528-17170547 | Msa0632730:intron | 40.0% | |
GATAGAGAAAGAAAGACGGA+GGG | + | chr4_3:17170529-17170548 | Msa0632730:intron | 40.0% | |
TCTTTCCAATGAATCCTAGG+GGG | - | chr4_3:17170621-17170640 | None:intergenic | 40.0% | |
TGAAAGAGGCAGTAGATACT+AGG | - | chr4_3:17170845-17170864 | None:intergenic | 40.0% | |
GCCTATGTAAACAACCAAAG+TGG | + | chr4_3:17170910-17170929 | Msa0632730:CDS | 40.0% | |
AACAACCAAAGTGGTGGTTT+CGG | + | chr4_3:17170919-17170938 | Msa0632730:CDS | 40.0% | |
ATGGTTGTGTAGGATTGCTT+AGG | - | chr4_3:17171165-17171184 | None:intergenic | 40.0% | |
GAATGTGCTGAAACTTCAGT+CGG | + | chr4_3:17171243-17171262 | Msa0632730:intron | 40.0% | |
GTTCCAAATCGGACAAAAGA+TGG | + | chr4_3:17171303-17171322 | Msa0632730:intron | 40.0% | |
CTAACACAACCCCACAAAAT+CGG | - | chr4_3:17171373-17171392 | None:intergenic | 40.0% | |
CAATTCCTTTCATGGTGATC+AGG | + | chr4_3:17171597-17171616 | Msa0632730:intron | 40.0% | |
! | CTTCTCCGCCAAATTTTTGA+TGG | - | chr4_3:17171642-17171661 | None:intergenic | 40.0% |
TATGAATTGTCGTCCTTCAC+TGG | + | chr4_3:17171864-17171883 | Msa0632730:intron | 40.0% | |
!!! | CAAGTTTCAGGTTTTGTACC+AGG | - | chr4_3:17171991-17172010 | None:intergenic | 40.0% |
TTGCATCGCTTACAAGTTTC+AGG | - | chr4_3:17172003-17172022 | None:intergenic | 40.0% | |
GAAACTTGTAAGCGATGCAA+AGG | + | chr4_3:17172003-17172022 | Msa0632730:CDS | 40.0% | |
GTCCAGATGTTTGTACAAAC+TGG | + | chr4_3:17172112-17172131 | Msa0632730:intron | 40.0% | |
AAGTACTTGTGCTACATGCA+AGG | + | chr4_3:17172150-17172169 | Msa0632730:CDS | 40.0% | |
AGTACTTGTGCTACATGCAA+GGG | + | chr4_3:17172151-17172170 | Msa0632730:CDS | 40.0% | |
! | GTCAAGTTGCATACTTATCC+TGG | + | chr4_3:17172532-17172551 | Msa0632730:CDS | 40.0% |
! | GTAACTTGTAATGTAGGCCA+TGG | + | chr4_3:17172590-17172609 | Msa0632730:intron | 40.0% |
CTCTGTATGCCATATAACCA+TGG | - | chr4_3:17172610-17172629 | None:intergenic | 40.0% | |
! | TTGCTGTTGCTAAGTTCACT+TGG | - | chr4_3:17172699-17172718 | None:intergenic | 40.0% |
TTGTTGTCTATCCCTGCAAA+TGG | - | chr4_3:17172922-17172941 | None:intergenic | 40.0% | |
AGACAACAATGAGACCCTAA+AGG | + | chr4_3:17172933-17172952 | Msa0632730:CDS | 40.0% | |
! | AATGAGACCCTAAAGGTACA+TGG | + | chr4_3:17172940-17172959 | Msa0632730:CDS | 40.0% |
TAGCATATAGATCACCGGAA+CGG | - | chr4_3:17172993-17173012 | None:intergenic | 40.0% | |
AATCCTTCTCTGCGAAAAAC+AGG | - | chr4_3:17173131-17173150 | None:intergenic | 40.0% | |
AGAAGGATTAGATGTTCACG+TGG | + | chr4_3:17173142-17173161 | Msa0632730:CDS | 40.0% | |
AAGCGAGGATGAGTTACAGT+TGG | - | chr4_3:17167381-17167400 | None:intergenic | 45.0% | |
!! | TGGGGATTTTTGGGGATGAA+TGG | - | chr4_3:17167471-17167490 | None:intergenic | 45.0% |
CCAGTAGGACGAATCATTTG+GGG | - | chr4_3:17167542-17167561 | None:intergenic | 45.0% | |
GCCAGTAGGACGAATCATTT+GGG | - | chr4_3:17167543-17167562 | None:intergenic | 45.0% | |
TGCCAGTAGGACGAATCATT+TGG | - | chr4_3:17167544-17167563 | None:intergenic | 45.0% | |
ACGAGTAAGGTGAGTGAAGA+GGG | - | chr4_3:17167570-17167589 | None:intergenic | 45.0% | |
GAAAGAGTGATCGACGAGTA+AGG | - | chr4_3:17167583-17167602 | None:intergenic | 45.0% | |
ACAAAAATACTCCCGGGGTT+AGG | + | chr4_3:17167858-17167877 | Msa0632730:intron | 45.0% | |
TTTCTTGGCTGGGACTGAAT+TGG | + | chr4_3:17168125-17168144 | Msa0632730:intron | 45.0% | |
TTCTTGGCTGGGACTGAATT+GGG | + | chr4_3:17168126-17168145 | Msa0632730:intron | 45.0% | |
TGGGCTGCTAGAAAATTGTG+AGG | + | chr4_3:17168145-17168164 | Msa0632730:intron | 45.0% | |
TCTAACTGCAAGTGGACAAG+GGG | - | chr4_3:17168361-17168380 | None:intergenic | 45.0% | |
GTCTAACTGCAAGTGGACAA+GGG | - | chr4_3:17168362-17168381 | None:intergenic | 45.0% | |
TGTCTAACTGCAAGTGGACA+AGG | - | chr4_3:17168363-17168382 | None:intergenic | 45.0% | |
TGTCCACTTGCAGTTAGACA+TGG | + | chr4_3:17168363-17168382 | Msa0632730:intron | 45.0% | |
ACACCATGTCTAACTGCAAG+TGG | - | chr4_3:17168369-17168388 | None:intergenic | 45.0% | |
GGGGCAACTAGATCTATTCA+TGG | + | chr4_3:17168435-17168454 | Msa0632730:CDS | 45.0% | |
! | ATTTTGCAGCATCGTTGGCA+AGG | + | chr4_3:17168762-17168781 | Msa0632730:intron | 45.0% |
! | CGATGTTCTTGGTGTGAGTA+AGG | + | chr4_3:17168793-17168812 | Msa0632730:CDS | 45.0% |
! | CAGGTCTTATCCCACTAAGT+GGG | + | chr4_3:17169337-17169356 | Msa0632730:intron | 45.0% |
! | AGGTCTTATCCCACTAAGTG+GGG | + | chr4_3:17169338-17169357 | Msa0632730:intron | 45.0% |
AAAAGCTGACCCCACTTAGT+GGG | - | chr4_3:17169350-17169369 | None:intergenic | 45.0% | |
TAGAACTAGGCCCCTCAAAT+TGG | - | chr4_3:17169471-17169490 | None:intergenic | 45.0% | |
!! | GGGGCCTAGTTCTAAAATGA+TGG | + | chr4_3:17169477-17169496 | Msa0632730:intron | 45.0% |
CGACCCCACTTAGTGTAATA+GGG | - | chr4_3:17169800-17169819 | None:intergenic | 45.0% | |
CCTATTACACTAAGTGGGGT+CGG | + | chr4_3:17169798-17169817 | Msa0632730:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_3:17169994-17170013 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_3:17169995-17170014 | None:intergenic | 45.0% |
!! | GTGGGATAAGGCTTGGTTTT+TGG | + | chr4_3:17170000-17170019 | Msa0632730:intron | 45.0% |
GCAAGCTACAGAATATGGAG+AGG | - | chr4_3:17170052-17170071 | None:intergenic | 45.0% | |
TTTCCGGATCTCCATGAAAG+AGG | - | chr4_3:17170492-17170511 | None:intergenic | 45.0% | |
CTCTGTTTACATTTCCCCCT+AGG | + | chr4_3:17170604-17170623 | Msa0632730:intron | 45.0% | |
CATTTCCCCCTAGGATTCAT+TGG | + | chr4_3:17170613-17170632 | Msa0632730:intron | 45.0% | |
AAGTCATTACATGGCCACCA+CGG | - | chr4_3:17170981-17171000 | None:intergenic | 45.0% | |
TTGCTTAGGATCTGCTCGTA+TGG | - | chr4_3:17171151-17171170 | None:intergenic | 45.0% | |
! | AGGCCATCTTTTGTCCGATT+TGG | - | chr4_3:17171309-17171328 | None:intergenic | 45.0% |
! | CGATTTTGTGGGGTTGTGTT+AGG | + | chr4_3:17171371-17171390 | Msa0632730:intron | 45.0% |
ATTTGGCGGAGAAGATGTCA+AGG | + | chr4_3:17171648-17171667 | Msa0632730:CDS | 45.0% | |
TCTTTCACGGAAGCTATCCA+AGG | + | chr4_3:17171773-17171792 | Msa0632730:CDS | 45.0% | |
CTTTCACGGAAGCTATCCAA+GGG | + | chr4_3:17171774-17171793 | Msa0632730:CDS | 45.0% | |
!! | ACAAAGTTTTGGTGCACCCT+TGG | - | chr4_3:17171793-17171812 | None:intergenic | 45.0% |
GACGTGCTTTGTAATGCTTG+TGG | + | chr4_3:17171824-17171843 | Msa0632730:CDS | 45.0% | |
CACTGTTGCCGAACTATTTC+AGG | + | chr4_3:17171949-17171968 | Msa0632730:intron | 45.0% | |
TGTTGCCGAACTATTTCAGG+TGG | + | chr4_3:17171952-17171971 | Msa0632730:intron | 45.0% | |
! | GTTGCCGAACTATTTCAGGT+GGG | + | chr4_3:17171953-17171972 | Msa0632730:intron | 45.0% |
CACTCCCACCTGAAATAGTT+CGG | - | chr4_3:17171960-17171979 | None:intergenic | 45.0% | |
!!! | GTTTCAGGTTTTGTACCAGG+AGG | - | chr4_3:17171988-17172007 | None:intergenic | 45.0% |
ACTGAAGACTGCCACGTAAA+TGG | - | chr4_3:17172298-17172317 | None:intergenic | 45.0% | |
AGTTTCTGCAAGTCTTGCCA+AGG | + | chr4_3:17172481-17172500 | Msa0632730:CDS | 45.0% | |
CTTTGACAACTTTGGCACCT+TGG | - | chr4_3:17172501-17172520 | None:intergenic | 45.0% | |
! | CAAGGTGCCAAAGTTGTCAA+AGG | + | chr4_3:17172499-17172518 | Msa0632730:CDS | 45.0% |
! | TGTGTATTCTTTGGCTCGAG+GGG | - | chr4_3:17172769-17172788 | None:intergenic | 45.0% |
! | GTGTGTATTCTTTGGCTCGA+GGG | - | chr4_3:17172770-17172789 | None:intergenic | 45.0% |
! | TGTGTGTATTCTTTGGCTCG+AGG | - | chr4_3:17172771-17172790 | None:intergenic | 45.0% |
ACCACCTCCATGTACCTTTA+GGG | - | chr4_3:17172950-17172969 | None:intergenic | 45.0% | |
GATCCTGATTCAAACCGTTC+CGG | + | chr4_3:17172976-17172995 | Msa0632730:CDS | 45.0% | |
!! | GATCCTGTTTTTCGCAGAGA+AGG | + | chr4_3:17173125-17173144 | Msa0632730:CDS | 45.0% |
AAGCGAGGATGAGTTACAGT+TGG | - | chr4_3:17167381-17167400 | None:intergenic | 45.0% | |
!! | TGGGGATTTTTGGGGATGAA+TGG | - | chr4_3:17167471-17167490 | None:intergenic | 45.0% |
CCAGTAGGACGAATCATTTG+GGG | - | chr4_3:17167542-17167561 | None:intergenic | 45.0% | |
GCCAGTAGGACGAATCATTT+GGG | - | chr4_3:17167543-17167562 | None:intergenic | 45.0% | |
TGCCAGTAGGACGAATCATT+TGG | - | chr4_3:17167544-17167563 | None:intergenic | 45.0% | |
ACGAGTAAGGTGAGTGAAGA+GGG | - | chr4_3:17167570-17167589 | None:intergenic | 45.0% | |
GAAAGAGTGATCGACGAGTA+AGG | - | chr4_3:17167583-17167602 | None:intergenic | 45.0% | |
ACAAAAATACTCCCGGGGTT+AGG | + | chr4_3:17167858-17167877 | Msa0632730:intron | 45.0% | |
TTTCTTGGCTGGGACTGAAT+TGG | + | chr4_3:17168125-17168144 | Msa0632730:intron | 45.0% | |
TTCTTGGCTGGGACTGAATT+GGG | + | chr4_3:17168126-17168145 | Msa0632730:intron | 45.0% | |
TGGGCTGCTAGAAAATTGTG+AGG | + | chr4_3:17168145-17168164 | Msa0632730:intron | 45.0% | |
TCTAACTGCAAGTGGACAAG+GGG | - | chr4_3:17168361-17168380 | None:intergenic | 45.0% | |
GTCTAACTGCAAGTGGACAA+GGG | - | chr4_3:17168362-17168381 | None:intergenic | 45.0% | |
TGTCTAACTGCAAGTGGACA+AGG | - | chr4_3:17168363-17168382 | None:intergenic | 45.0% | |
TGTCCACTTGCAGTTAGACA+TGG | + | chr4_3:17168363-17168382 | Msa0632730:intron | 45.0% | |
ACACCATGTCTAACTGCAAG+TGG | - | chr4_3:17168369-17168388 | None:intergenic | 45.0% | |
GGGGCAACTAGATCTATTCA+TGG | + | chr4_3:17168435-17168454 | Msa0632730:CDS | 45.0% | |
! | ATTTTGCAGCATCGTTGGCA+AGG | + | chr4_3:17168762-17168781 | Msa0632730:intron | 45.0% |
! | CGATGTTCTTGGTGTGAGTA+AGG | + | chr4_3:17168793-17168812 | Msa0632730:CDS | 45.0% |
! | CAGGTCTTATCCCACTAAGT+GGG | + | chr4_3:17169337-17169356 | Msa0632730:intron | 45.0% |
! | AGGTCTTATCCCACTAAGTG+GGG | + | chr4_3:17169338-17169357 | Msa0632730:intron | 45.0% |
AAAAGCTGACCCCACTTAGT+GGG | - | chr4_3:17169350-17169369 | None:intergenic | 45.0% | |
TAGAACTAGGCCCCTCAAAT+TGG | - | chr4_3:17169471-17169490 | None:intergenic | 45.0% | |
!! | GGGGCCTAGTTCTAAAATGA+TGG | + | chr4_3:17169477-17169496 | Msa0632730:intron | 45.0% |
CGACCCCACTTAGTGTAATA+GGG | - | chr4_3:17169800-17169819 | None:intergenic | 45.0% | |
CCTATTACACTAAGTGGGGT+CGG | + | chr4_3:17169798-17169817 | Msa0632730:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_3:17169994-17170013 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_3:17169995-17170014 | None:intergenic | 45.0% |
!! | GTGGGATAAGGCTTGGTTTT+TGG | + | chr4_3:17170000-17170019 | Msa0632730:intron | 45.0% |
GCAAGCTACAGAATATGGAG+AGG | - | chr4_3:17170052-17170071 | None:intergenic | 45.0% | |
TTTCCGGATCTCCATGAAAG+AGG | - | chr4_3:17170492-17170511 | None:intergenic | 45.0% | |
CTCTGTTTACATTTCCCCCT+AGG | + | chr4_3:17170604-17170623 | Msa0632730:intron | 45.0% | |
CATTTCCCCCTAGGATTCAT+TGG | + | chr4_3:17170613-17170632 | Msa0632730:intron | 45.0% | |
AAGTCATTACATGGCCACCA+CGG | - | chr4_3:17170981-17171000 | None:intergenic | 45.0% | |
TTGCTTAGGATCTGCTCGTA+TGG | - | chr4_3:17171151-17171170 | None:intergenic | 45.0% | |
! | AGGCCATCTTTTGTCCGATT+TGG | - | chr4_3:17171309-17171328 | None:intergenic | 45.0% |
! | CGATTTTGTGGGGTTGTGTT+AGG | + | chr4_3:17171371-17171390 | Msa0632730:intron | 45.0% |
ATTTGGCGGAGAAGATGTCA+AGG | + | chr4_3:17171648-17171667 | Msa0632730:CDS | 45.0% | |
TCTTTCACGGAAGCTATCCA+AGG | + | chr4_3:17171773-17171792 | Msa0632730:CDS | 45.0% | |
CTTTCACGGAAGCTATCCAA+GGG | + | chr4_3:17171774-17171793 | Msa0632730:CDS | 45.0% | |
!! | ACAAAGTTTTGGTGCACCCT+TGG | - | chr4_3:17171793-17171812 | None:intergenic | 45.0% |
GACGTGCTTTGTAATGCTTG+TGG | + | chr4_3:17171824-17171843 | Msa0632730:CDS | 45.0% | |
CACTGTTGCCGAACTATTTC+AGG | + | chr4_3:17171949-17171968 | Msa0632730:intron | 45.0% | |
TGTTGCCGAACTATTTCAGG+TGG | + | chr4_3:17171952-17171971 | Msa0632730:intron | 45.0% | |
! | GTTGCCGAACTATTTCAGGT+GGG | + | chr4_3:17171953-17171972 | Msa0632730:intron | 45.0% |
CACTCCCACCTGAAATAGTT+CGG | - | chr4_3:17171960-17171979 | None:intergenic | 45.0% | |
!!! | GTTTCAGGTTTTGTACCAGG+AGG | - | chr4_3:17171988-17172007 | None:intergenic | 45.0% |
ACTGAAGACTGCCACGTAAA+TGG | - | chr4_3:17172298-17172317 | None:intergenic | 45.0% | |
AGTTTCTGCAAGTCTTGCCA+AGG | + | chr4_3:17172481-17172500 | Msa0632730:CDS | 45.0% | |
CTTTGACAACTTTGGCACCT+TGG | - | chr4_3:17172501-17172520 | None:intergenic | 45.0% | |
! | CAAGGTGCCAAAGTTGTCAA+AGG | + | chr4_3:17172499-17172518 | Msa0632730:CDS | 45.0% |
! | TGTGTATTCTTTGGCTCGAG+GGG | - | chr4_3:17172769-17172788 | None:intergenic | 45.0% |
! | GTGTGTATTCTTTGGCTCGA+GGG | - | chr4_3:17172770-17172789 | None:intergenic | 45.0% |
! | TGTGTGTATTCTTTGGCTCG+AGG | - | chr4_3:17172771-17172790 | None:intergenic | 45.0% |
ACCACCTCCATGTACCTTTA+GGG | - | chr4_3:17172950-17172969 | None:intergenic | 45.0% | |
GATCCTGATTCAAACCGTTC+CGG | + | chr4_3:17172976-17172995 | Msa0632730:CDS | 45.0% | |
!! | GATCCTGTTTTTCGCAGAGA+AGG | + | chr4_3:17173125-17173144 | Msa0632730:CDS | 45.0% |
!!! | TTTGATTTAAAATTTAAATT+AGG | + | chr4_3:17169270-17169289 | Msa0632730:intron | 5.0% |
!! | AATTTATTTACAAAAATTAA+GGG | - | chr4_3:17172335-17172354 | None:intergenic | 5.0% |
!!! | TTTGATTTAAAATTTAAATT+AGG | + | chr4_3:17169270-17169289 | Msa0632730:intron | 5.0% |
!! | AATTTATTTACAAAAATTAA+GGG | - | chr4_3:17172335-17172354 | None:intergenic | 5.0% |
TGTAACTCATCCTCGCTTCC+CGG | + | chr4_3:17167383-17167402 | Msa0632730:five_prime_UTR | 50.0% | |
CCCCAAATGATTCGTCCTAC+TGG | + | chr4_3:17167539-17167558 | Msa0632730:exon | 50.0% | |
GACGAGTAAGGTGAGTGAAG+AGG | - | chr4_3:17167571-17167590 | None:intergenic | 50.0% | |
TGAGGCACAAATCCGACACA+GGG | - | chr4_3:17167889-17167908 | None:intergenic | 50.0% | |
ATGAGGCACAAATCCGACAC+AGG | - | chr4_3:17167890-17167909 | None:intergenic | 50.0% | |
! | GAACTGGTTGCTATTGGGAG+CGG | + | chr4_3:17168398-17168417 | Msa0632730:CDS | 50.0% |
GGATAGTAGATGTAGGCACG+TGG | + | chr4_3:17168634-17168653 | Msa0632730:intron | 50.0% | |
CCTCTCTCATCCCACATCAT+AGG | - | chr4_3:17169023-17169042 | None:intergenic | 50.0% | |
CCTATGATGTGGGATGAGAG+AGG | + | chr4_3:17169020-17169039 | Msa0632730:intron | 50.0% | |
CCACTTAGTGGGATAAGACC+TGG | - | chr4_3:17169339-17169358 | None:intergenic | 50.0% | |
! | CCAGGTCTTATCCCACTAAG+TGG | + | chr4_3:17169336-17169355 | Msa0632730:intron | 50.0% |
CAAAAGCTGACCCCACTTAG+TGG | - | chr4_3:17169351-17169370 | None:intergenic | 50.0% | |
ACATGGGTCCCACCAATTTG+AGG | + | chr4_3:17169456-17169475 | Msa0632730:intron | 50.0% | |
CATGGGTCCCACCAATTTGA+GGG | + | chr4_3:17169457-17169476 | Msa0632730:intron | 50.0% | |
ATGGGTCCCACCAATTTGAG+GGG | + | chr4_3:17169458-17169477 | Msa0632730:intron | 50.0% | |
ACTAGGCCCCTCAAATTGGT+GGG | - | chr4_3:17169467-17169486 | None:intergenic | 50.0% | |
AACTAGGCCCCTCAAATTGG+TGG | - | chr4_3:17169468-17169487 | None:intergenic | 50.0% | |
CCGACCCCACTTAGTGTAAT+AGG | - | chr4_3:17169801-17169820 | None:intergenic | 50.0% | |
TTATTGCCGACCCCACTTAG+TGG | + | chr4_3:17169981-17170000 | Msa0632730:intron | 50.0% | |
TATTGCCGACCCCACTTAGT+GGG | + | chr4_3:17169982-17170001 | Msa0632730:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_3:17169342-17169361 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_3:17169996-17170015 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_3:17169993-17170012 | Msa0632730:intron | 50.0% | |
TGGCCTCTTTCATGGAGATC+CGG | + | chr4_3:17170486-17170505 | Msa0632730:intron | 50.0% | |
AACCAAAGTGGTGGTTTCGG+AGG | + | chr4_3:17170922-17170941 | Msa0632730:CDS | 50.0% | |
!! | ACCCTACGAGCCGATTTTGT+GGG | + | chr4_3:17171360-17171379 | Msa0632730:intron | 50.0% |
! | CGAACTATTTCAGGTGGGAG+TGG | + | chr4_3:17171958-17171977 | Msa0632730:intron | 50.0% |
TGTAAGCGATGCAAAGGGTC+AGG | + | chr4_3:17172009-17172028 | Msa0632730:CDS | 50.0% | |
AGGAGTGGTCAGTATCGTGT+TGG | + | chr4_3:17172029-17172048 | Msa0632730:intron | 50.0% | |
TGTGCTACATGCAAGGGAAC+TGG | + | chr4_3:17172157-17172176 | Msa0632730:CDS | 50.0% | |
! | GTGTATTCTTTGGCTCGAGG+GGG | - | chr4_3:17172768-17172787 | None:intergenic | 50.0% |
! | GAGACCCTAAAGGTACATGG+AGG | + | chr4_3:17172943-17172962 | Msa0632730:CDS | 50.0% |
! | ACCCTAAAGGTACATGGAGG+TGG | + | chr4_3:17172946-17172965 | Msa0632730:CDS | 50.0% |
CACCACCTCCATGTACCTTT+AGG | - | chr4_3:17172951-17172970 | None:intergenic | 50.0% | |
! | CTAAAGGTACATGGAGGTGG+TGG | + | chr4_3:17172949-17172968 | Msa0632730:CDS | 50.0% |
TCACCGGAACGGTTTGAATC+AGG | - | chr4_3:17172982-17173001 | None:intergenic | 50.0% | |
TGTAACTCATCCTCGCTTCC+CGG | + | chr4_3:17167383-17167402 | Msa0632730:five_prime_UTR | 50.0% | |
CCCCAAATGATTCGTCCTAC+TGG | + | chr4_3:17167539-17167558 | Msa0632730:exon | 50.0% | |
GACGAGTAAGGTGAGTGAAG+AGG | - | chr4_3:17167571-17167590 | None:intergenic | 50.0% | |
TGAGGCACAAATCCGACACA+GGG | - | chr4_3:17167889-17167908 | None:intergenic | 50.0% | |
ATGAGGCACAAATCCGACAC+AGG | - | chr4_3:17167890-17167909 | None:intergenic | 50.0% | |
! | GAACTGGTTGCTATTGGGAG+CGG | + | chr4_3:17168398-17168417 | Msa0632730:CDS | 50.0% |
GGATAGTAGATGTAGGCACG+TGG | + | chr4_3:17168634-17168653 | Msa0632730:intron | 50.0% | |
CCTCTCTCATCCCACATCAT+AGG | - | chr4_3:17169023-17169042 | None:intergenic | 50.0% | |
CCTATGATGTGGGATGAGAG+AGG | + | chr4_3:17169020-17169039 | Msa0632730:intron | 50.0% | |
CCACTTAGTGGGATAAGACC+TGG | - | chr4_3:17169339-17169358 | None:intergenic | 50.0% | |
! | CCAGGTCTTATCCCACTAAG+TGG | + | chr4_3:17169336-17169355 | Msa0632730:intron | 50.0% |
CAAAAGCTGACCCCACTTAG+TGG | - | chr4_3:17169351-17169370 | None:intergenic | 50.0% | |
ACATGGGTCCCACCAATTTG+AGG | + | chr4_3:17169456-17169475 | Msa0632730:intron | 50.0% | |
CATGGGTCCCACCAATTTGA+GGG | + | chr4_3:17169457-17169476 | Msa0632730:intron | 50.0% | |
ATGGGTCCCACCAATTTGAG+GGG | + | chr4_3:17169458-17169477 | Msa0632730:intron | 50.0% | |
ACTAGGCCCCTCAAATTGGT+GGG | - | chr4_3:17169467-17169486 | None:intergenic | 50.0% | |
AACTAGGCCCCTCAAATTGG+TGG | - | chr4_3:17169468-17169487 | None:intergenic | 50.0% | |
CCGACCCCACTTAGTGTAAT+AGG | - | chr4_3:17169801-17169820 | None:intergenic | 50.0% | |
TTATTGCCGACCCCACTTAG+TGG | + | chr4_3:17169981-17170000 | Msa0632730:intron | 50.0% | |
TATTGCCGACCCCACTTAGT+GGG | + | chr4_3:17169982-17170001 | Msa0632730:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_3:17169342-17169361 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_3:17169996-17170015 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_3:17169993-17170012 | Msa0632730:intron | 50.0% | |
TGGCCTCTTTCATGGAGATC+CGG | + | chr4_3:17170486-17170505 | Msa0632730:intron | 50.0% | |
AACCAAAGTGGTGGTTTCGG+AGG | + | chr4_3:17170922-17170941 | Msa0632730:CDS | 50.0% | |
!! | ACCCTACGAGCCGATTTTGT+GGG | + | chr4_3:17171360-17171379 | Msa0632730:intron | 50.0% |
! | CGAACTATTTCAGGTGGGAG+TGG | + | chr4_3:17171958-17171977 | Msa0632730:intron | 50.0% |
TGTAAGCGATGCAAAGGGTC+AGG | + | chr4_3:17172009-17172028 | Msa0632730:CDS | 50.0% | |
AGGAGTGGTCAGTATCGTGT+TGG | + | chr4_3:17172029-17172048 | Msa0632730:intron | 50.0% | |
TGTGCTACATGCAAGGGAAC+TGG | + | chr4_3:17172157-17172176 | Msa0632730:CDS | 50.0% | |
! | GTGTATTCTTTGGCTCGAGG+GGG | - | chr4_3:17172768-17172787 | None:intergenic | 50.0% |
! | GAGACCCTAAAGGTACATGG+AGG | + | chr4_3:17172943-17172962 | Msa0632730:CDS | 50.0% |
! | ACCCTAAAGGTACATGGAGG+TGG | + | chr4_3:17172946-17172965 | Msa0632730:CDS | 50.0% |
CACCACCTCCATGTACCTTT+AGG | - | chr4_3:17172951-17172970 | None:intergenic | 50.0% | |
! | CTAAAGGTACATGGAGGTGG+TGG | + | chr4_3:17172949-17172968 | Msa0632730:CDS | 50.0% |
TCACCGGAACGGTTTGAATC+AGG | - | chr4_3:17172982-17173001 | None:intergenic | 50.0% | |
TCTAGTAGAACCGGGAAGCG+AGG | - | chr4_3:17167396-17167415 | None:intergenic | 55.0% | |
GTGAAGAGGGTGATGCCAGT+AGG | - | chr4_3:17167557-17167576 | None:intergenic | 55.0% | |
GGTTAGGCGTATCCCTGTGT+CGG | + | chr4_3:17167874-17167893 | Msa0632730:intron | 55.0% | |
AACTGCAAGTGGACAAGGGG+AGG | - | chr4_3:17168358-17168377 | None:intergenic | 55.0% | |
! | ACCATAGCTGGCCTCCATCA+TGG | + | chr4_3:17169135-17169154 | Msa0632730:intron | 55.0% |
CGACCCCACTTAGTGGGATA+AGG | + | chr4_3:17169988-17170007 | Msa0632730:intron | 55.0% | |
TGCCTCCGAAACCACCACTT+TGG | - | chr4_3:17170927-17170946 | None:intergenic | 55.0% | |
AGTGGTGGTTTCGGAGGCAA+TGG | + | chr4_3:17170928-17170947 | Msa0632730:CDS | 55.0% | |
CCACGGAACATCTGCTCGAA+AGG | - | chr4_3:17170964-17170983 | None:intergenic | 55.0% | |
CCTTTCGAGCAGATGTTCCG+TGG | + | chr4_3:17170961-17170980 | Msa0632730:CDS | 55.0% | |
TTCGAGCAGATGTTCCGTGG+TGG | + | chr4_3:17170964-17170983 | Msa0632730:CDS | 55.0% | |
!! | CAAAATCGGCTCGTAGGGTG+AGG | - | chr4_3:17171359-17171378 | None:intergenic | 55.0% |
!! | CACCCTACGAGCCGATTTTG+TGG | + | chr4_3:17171359-17171378 | Msa0632730:intron | 55.0% |
!! | CCCCACAAAATCGGCTCGTA+GGG | - | chr4_3:17171364-17171383 | None:intergenic | 55.0% |
!! | CCCTACGAGCCGATTTTGTG+GGG | + | chr4_3:17171361-17171380 | Msa0632730:intron | 55.0% |
!! | ACCCCACAAAATCGGCTCGT+AGG | - | chr4_3:17171365-17171384 | None:intergenic | 55.0% |
TCTAGTAGAACCGGGAAGCG+AGG | - | chr4_3:17167396-17167415 | None:intergenic | 55.0% | |
GTGAAGAGGGTGATGCCAGT+AGG | - | chr4_3:17167557-17167576 | None:intergenic | 55.0% | |
GGTTAGGCGTATCCCTGTGT+CGG | + | chr4_3:17167874-17167893 | Msa0632730:intron | 55.0% | |
AACTGCAAGTGGACAAGGGG+AGG | - | chr4_3:17168358-17168377 | None:intergenic | 55.0% | |
! | ACCATAGCTGGCCTCCATCA+TGG | + | chr4_3:17169135-17169154 | Msa0632730:intron | 55.0% |
CGACCCCACTTAGTGGGATA+AGG | + | chr4_3:17169988-17170007 | Msa0632730:intron | 55.0% | |
TGCCTCCGAAACCACCACTT+TGG | - | chr4_3:17170927-17170946 | None:intergenic | 55.0% | |
AGTGGTGGTTTCGGAGGCAA+TGG | + | chr4_3:17170928-17170947 | Msa0632730:CDS | 55.0% | |
CCACGGAACATCTGCTCGAA+AGG | - | chr4_3:17170964-17170983 | None:intergenic | 55.0% | |
CCTTTCGAGCAGATGTTCCG+TGG | + | chr4_3:17170961-17170980 | Msa0632730:CDS | 55.0% | |
TTCGAGCAGATGTTCCGTGG+TGG | + | chr4_3:17170964-17170983 | Msa0632730:CDS | 55.0% | |
!! | CAAAATCGGCTCGTAGGGTG+AGG | - | chr4_3:17171359-17171378 | None:intergenic | 55.0% |
!! | CACCCTACGAGCCGATTTTG+TGG | + | chr4_3:17171359-17171378 | Msa0632730:intron | 55.0% |
!! | CCCCACAAAATCGGCTCGTA+GGG | - | chr4_3:17171364-17171383 | None:intergenic | 55.0% |
!! | CCCTACGAGCCGATTTTGTG+GGG | + | chr4_3:17171361-17171380 | Msa0632730:intron | 55.0% |
!! | ACCCCACAAAATCGGCTCGT+AGG | - | chr4_3:17171365-17171384 | None:intergenic | 55.0% |
ACAGGGATACGCCTAACCCC+GGG | - | chr4_3:17167872-17167891 | None:intergenic | 60.0% | |
CACAGGGATACGCCTAACCC+CGG | - | chr4_3:17167873-17167892 | None:intergenic | 60.0% | |
TGCAAGTGGACAAGGGGAGG+AGG | - | chr4_3:17168355-17168374 | None:intergenic | 60.0% | |
! | GCCATGATGGAGGCCAGCTA+TGG | - | chr4_3:17169139-17169158 | None:intergenic | 60.0% |
GGTGGTTTCGGAGGCAATGG+TGG | + | chr4_3:17170931-17170950 | Msa0632730:CDS | 60.0% | |
GCGATGCAAAGGGTCAGGAG+TGG | + | chr4_3:17172014-17172033 | Msa0632730:CDS | 60.0% | |
ACAGGGATACGCCTAACCCC+GGG | - | chr4_3:17167872-17167891 | None:intergenic | 60.0% | |
CACAGGGATACGCCTAACCC+CGG | - | chr4_3:17167873-17167892 | None:intergenic | 60.0% | |
TGCAAGTGGACAAGGGGAGG+AGG | - | chr4_3:17168355-17168374 | None:intergenic | 60.0% | |
! | GCCATGATGGAGGCCAGCTA+TGG | - | chr4_3:17169139-17169158 | None:intergenic | 60.0% |
GGTGGTTTCGGAGGCAATGG+TGG | + | chr4_3:17170931-17170950 | Msa0632730:CDS | 60.0% | |
GCGATGCAAAGGGTCAGGAG+TGG | + | chr4_3:17172014-17172033 | Msa0632730:CDS | 60.0% | |
GGTGGGAGTGGTCTTCCTCC+TGG | + | chr4_3:17171970-17171989 | Msa0632730:intron | 65.0% | |
GGTGGGAGTGGTCTTCCTCC+TGG | + | chr4_3:17171970-17171989 | Msa0632730:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 17167360 | 17173318 | 17167360 | ID=Msa0632730;Name=Msa0632730 |
chr4_3 | mRNA | 17167360 | 17173318 | 17167360 | ID=Msa0632730-mRNA-1;Parent=Msa0632730;Name=Msa0632730-mRNA-1;_AED=0.09;_eAED=0.09;_QI=185|0.92|0.85|1|1|1|14|32|374 |
chr4_3 | exon | 17167360 | 17167616 | 17167360 | ID=Msa0632730-mRNA-1:exon:4779;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17167717 | 17167798 | 17167717 | ID=Msa0632730-mRNA-1:exon:4780;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17168376 | 17168462 | 17168376 | ID=Msa0632730-mRNA-1:exon:4781;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17168771 | 17168857 | 17168771 | ID=Msa0632730-mRNA-1:exon:4782;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17170101 | 17170150 | 17170101 | ID=Msa0632730-mRNA-1:exon:4783;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17170257 | 17170295 | 17170257 | ID=Msa0632730-mRNA-1:exon:4784;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17170898 | 17170990 | 17170898 | ID=Msa0632730-mRNA-1:exon:4785;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17171619 | 17171669 | 17171619 | ID=Msa0632730-mRNA-1:exon:4786;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17171758 | 17171845 | 17171758 | ID=Msa0632730-mRNA-1:exon:4787;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17171971 | 17172035 | 17171971 | ID=Msa0632730-mRNA-1:exon:4788;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17172118 | 17172192 | 17172118 | ID=Msa0632730-mRNA-1:exon:4789;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17172481 | 17172553 | 17172481 | ID=Msa0632730-mRNA-1:exon:4790;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17172929 | 17173020 | 17172929 | ID=Msa0632730-mRNA-1:exon:4791;Parent=Msa0632730-mRNA-1 |
chr4_3 | exon | 17173116 | 17173318 | 17173116 | ID=Msa0632730-mRNA-1:exon:4792;Parent=Msa0632730-mRNA-1 |
chr4_3 | five_prime_UTR | 17167360 | 17167544 | 17167360 | ID=Msa0632730-mRNA-1:five_prime_utr;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17167545 | 17167616 | 17167545 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17167717 | 17167798 | 17167717 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17168376 | 17168462 | 17168376 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17168771 | 17168857 | 17168771 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17170101 | 17170150 | 17170101 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17170257 | 17170295 | 17170257 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17170898 | 17170990 | 17170898 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17171619 | 17171669 | 17171619 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17171758 | 17171845 | 17171758 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17171971 | 17172035 | 17171971 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17172118 | 17172192 | 17172118 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17172481 | 17172553 | 17172481 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17172929 | 17173020 | 17172929 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | CDS | 17173116 | 17173286 | 17173116 | ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1 |
chr4_3 | three_prime_UTR | 17173287 | 17173318 | 17173287 | ID=Msa0632730-mRNA-1:three_prime_utr;Parent=Msa0632730-mRNA-1 |
Gene Sequence |
Protein sequence |