AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0632730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632730 MtrunA17_Chr4g0010781 92.113 355 18 1 1 345 1 355 0.0 630
Msa0632730 MtrunA17_Chr3g0087741 62.778 360 115 5 1 345 1 356 2.28e-155 444
Msa0632730 MtrunA17_Chr5g0426951 34.639 332 182 6 34 345 37 353 1.96e-57 194
Msa0632730 MtrunA17_Chr4g0010801 53.614 166 38 1 196 322 2 167 6.99e-50 166
Msa0632730 MtrunA17_Chr3g0123861 34.385 317 168 7 64 341 44 359 1.72e-42 153
Msa0632730 MtrunA17_Chr8g0334811 36.014 286 141 10 87 344 15 286 1.62e-39 145
Msa0632730 MtrunA17_Chr2g0333221 31.908 304 165 7 75 345 59 353 2.70e-37 140
Msa0632730 MtrunA17_Chr6g0478651 29.795 292 165 6 85 345 67 349 7.32e-34 131
Msa0632730 MtrunA17_Chr2g0322181 35.507 276 155 7 87 344 14 284 3.74e-31 122
Msa0632730 MtrunA17_Chr4g0025401 35.145 276 154 8 87 344 14 282 9.30e-28 113
Msa0632730 MtrunA17_Chr7g0269841 27.178 287 153 9 80 344 20 272 5.83e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632730 AT5G48030.1 50.000 376 151 9 1 345 1 370 6.66e-114 340
Msa0632730 AT1G28210.3 36.426 291 155 6 75 345 34 314 1.97e-55 187
Msa0632730 AT1G28210.1 36.426 291 155 6 75 345 34 314 2.28e-55 187
Msa0632730 AT1G28210.2 36.426 291 155 6 75 345 34 314 3.13e-55 187
Msa0632730 AT2G22360.1 34.211 342 177 12 35 341 34 362 1.18e-43 157
Msa0632730 AT4G39960.1 35.254 295 139 8 87 341 86 368 1.30e-41 152
Msa0632730 AT4G39960.2 35.254 295 139 8 87 341 86 368 1.30e-41 152
Msa0632730 AT1G80030.2 33.904 292 144 8 87 338 76 358 1.17e-37 142
Msa0632730 AT1G80030.3 33.904 292 144 8 87 338 76 358 1.17e-37 142
Msa0632730 AT1G80030.1 33.904 292 144 8 87 338 76 358 1.17e-37 142
Msa0632730 AT1G80030.4 33.904 292 144 8 87 338 76 358 1.46e-37 141
Msa0632730 AT3G17830.1 29.352 293 165 6 87 345 64 348 9.43e-35 134
Msa0632730 AT5G22060.1 34.420 276 158 8 87 344 15 285 1.71e-30 121
Msa0632730 AT3G44110.1 33.455 275 161 8 87 344 15 284 7.01e-28 114
Msa0632730 AT3G44110.2 33.455 275 161 8 87 344 15 284 7.30e-28 112
Msa0632730 AT3G62600.1 27.208 283 150 10 85 344 25 274 2.92e-13 70.5
Msa0632730 AT5G25530.2 38.679 106 45 4 87 177 5 105 6.23e-13 69.7

Find 99 sgRNAs with CRISPR-Local

Find 798 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGCGGCTAATTCATATTT+TGG 0.131687 4_3:+17168414 Msa0632730:CDS
TCCATTTCCTCAAATTAATT+AGG 0.137163 4_3:+17167427 Msa0632730:five_prime_UTR
AATCCATCATCTACTGTTAT+TGG 0.177439 4_3:+17167756 Msa0632730:CDS
TTGCATCGCTTACAAGTTTC+AGG 0.178751 4_3:-17172000 None:intergenic
CCATTTCCTCAAATTAATTA+GGG 0.221010 4_3:+17167428 Msa0632730:five_prime_UTR
TAGTGTTTCAAAGGGGTTAT+AGG 0.275001 4_3:+17167727 Msa0632730:CDS
TAATTTGAGGAAATGGAAAT+TGG 0.277674 4_3:-17167421 None:intergenic
TTTGATTGAATAGGTGAATT+GGG 0.281655 4_3:-17167487 None:intergenic
CCCTAATTAATTTGAGGAAA+TGG 0.291408 4_3:-17167428 None:intergenic
CACCACCTCCATGTACCTTT+AGG 0.307308 4_3:-17172948 None:intergenic
TTTGAAGAACTGGTTGCTAT+TGG 0.317603 4_3:+17168392 Msa0632730:CDS
GAAATAAAGAAAGCTTACTA+TGG 0.322849 4_3:+17168830 Msa0632730:CDS
TTAGGAATTATCTTGCTTAT+CGG 0.326118 4_3:+17173297 Msa0632730:three_prime_UTR
CTTTGTTCCTTTGACAACTT+TGG 0.331164 4_3:-17172506 None:intergenic
GCCAGTAGGACGAATCATTT+GGG 0.345959 4_3:-17167540 None:intergenic
ATAGTAAGCTTTCTTTATTT+CGG 0.347885 4_3:-17168828 None:intergenic
ACCACCTCCATGTACCTTTA+GGG 0.357234 4_3:-17172947 None:intergenic
TTGGAAGATTCTAGTAGAAC+CGG 0.371487 4_3:-17167402 None:intergenic
TTGAAGAACTGGTTGCTATT+GGG 0.371930 4_3:+17168393 Msa0632730:CDS
TGCCAGTAGGACGAATCATT+TGG 0.376227 4_3:-17167541 None:intergenic
GTCCAGATGTTTGTACAAAC+TGG 0.376510 4_3:+17172112 Msa0632730:intron
TGTAACTCATCCTCGCTTCC+CGG 0.383507 4_3:+17167383 Msa0632730:five_prime_UTR
AGGAGCTATTACGATGTTCT+TGG 0.393663 4_3:+17168782 Msa0632730:CDS
GGGGCAACTAGATCTATTCA+TGG 0.412586 4_3:+17168435 Msa0632730:CDS
AGAAGTTACATTGGCATATG+AGG 0.415080 4_3:+17170129 Msa0632730:CDS
AACAACCAAAGTGGTGGTTT+CGG 0.424450 4_3:+17170919 Msa0632730:CDS
CTTTGACAACTTTGGCACCT+TGG 0.428176 4_3:-17172498 None:intergenic
TCACCGGAACGGTTTGAATC+AGG 0.428315 4_3:-17172979 None:intergenic
TGTTTGAAATGACAAAGTTT+TGG 0.428748 4_3:-17171801 None:intergenic
TGTGCTACATGCAAGGGAAC+TGG 0.431002 4_3:+17172157 Msa0632730:CDS
CCCCAAATGATTCGTCCTAC+TGG 0.434059 4_3:+17167539 Msa0632730:exon
AAAGATGTGTACGGAATGAT+TGG 0.438202 4_3:-17167606 None:intergenic
ATGGTGTTCATTTGAAGAAC+TGG 0.440591 4_3:+17168382 Msa0632730:CDS
AACTAGATCTATTCATGGCT+CGG 0.445228 4_3:+17168440 Msa0632730:CDS
CATTTGGGGAATTGAATTGA+AGG 0.450855 4_3:-17167525 None:intergenic
CGATGTTCTTGGTGTGAGTA+AGG 0.456412 4_3:+17168793 Msa0632730:CDS
GGTGGGAGTGGTCTTCCTCC+TGG 0.467186 4_3:+17171970 Msa0632730:intron
TATATCAAGTAGTGTTTCAA+AGG 0.471709 4_3:+17167718 Msa0632730:CDS
GAAAGAGTGATCGACGAGTA+AGG 0.478803 4_3:-17167580 None:intergenic
GATCCTGATTCAAACCGTTC+CGG 0.480511 4_3:+17172976 Msa0632730:CDS
GGTAGTAGTTATGCAACAAA+TGG 0.489305 4_3:+17167777 Msa0632730:CDS
AAATAAAGAAAGCTTACTAT+GGG 0.491279 4_3:+17168831 Msa0632730:CDS
TGCCTCCGAAACCACCACTT+TGG 0.495412 4_3:-17170924 None:intergenic
ATATCAAGTAGTGTTTCAAA+GGG 0.507204 4_3:+17167719 Msa0632730:CDS
TGTAAGCGATGCAAAGGGTC+AGG 0.507844 4_3:+17172009 Msa0632730:CDS
GTCAAGTTGCATACTTATCC+TGG 0.510591 4_3:+17172532 Msa0632730:CDS
GAAGTTTCAAGAAGTTACAT+TGG 0.513562 4_3:+17170120 Msa0632730:CDS
CCACGGAACATCTGCTCGAA+AGG 0.515788 4_3:-17170961 None:intergenic
CGAACTATTTCAGGTGGGAG+TGG 0.521446 4_3:+17171958 Msa0632730:intron
TTGATTGAATAGGTGAATTG+GGG 0.521791 4_3:-17167486 None:intergenic
ACCACTTTGGTTGTTTACAT+AGG 0.523371 4_3:-17170911 None:intergenic
TGTGGTTGAACTATCTTTCA+CGG 0.532096 4_3:+17171760 Msa0632730:CDS
AGTGGTGGTTTCGGAGGCAA+TGG 0.540722 4_3:+17170928 Msa0632730:CDS
AAAACGTCAACAGTATGATC+AGG 0.540871 4_3:+17170274 Msa0632730:CDS
TGATCTATATGCTACTATCA+AGG 0.542920 4_3:+17172999 Msa0632730:CDS
CTACCAATAACAGTAGATGA+TGG 0.550722 4_3:-17167759 None:intergenic
ACGAGTAAGGTGAGTGAAGA+GGG 0.551659 4_3:-17167567 None:intergenic
AAGTACTTGTGCTACATGCA+AGG 0.554627 4_3:+17172150 Msa0632730:CDS
ACTAGATCTATTCATGGCTC+GGG 0.557340 4_3:+17168441 Msa0632730:CDS
GAAACTTGTAAGCGATGCAA+AGG 0.557844 4_3:+17172003 Msa0632730:CDS
ACCCTAAAGGTACATGGAGG+TGG 0.565389 4_3:+17172946 Msa0632730:CDS
ACAAACTGGAATATTCAGAA+TGG 0.567594 4_3:+17172126 Msa0632730:CDS
AAGCGAGGATGAGTTACAGT+TGG 0.568587 4_3:-17167378 None:intergenic
TGTCCACTTGCAGTTAGACA+TGG 0.569909 4_3:+17168363 Msa0632730:intron
GGTGGTTTCGGAGGCAATGG+TGG 0.572038 4_3:+17170931 Msa0632730:CDS
AAGAAAGCTTACTATGGGGT+AGG 0.572919 4_3:+17168836 Msa0632730:CDS
CTAAAGGTACATGGAGGTGG+TGG 0.575599 4_3:+17172949 Msa0632730:CDS
TCTTTCACGGAAGCTATCCA+AGG 0.575784 4_3:+17171773 Msa0632730:CDS
GAACTGGTTGCTATTGGGAG+CGG 0.575920 4_3:+17168398 Msa0632730:CDS
CAAGGTGCCAAAGTTGTCAA+AGG 0.589611 4_3:+17172499 Msa0632730:CDS
ATTTGGCGGAGAAGATGTCA+AGG 0.593689 4_3:+17171648 Msa0632730:CDS
AGTTTCTGCAAGTCTTGCCA+AGG 0.595904 4_3:+17172481 Msa0632730:CDS
AACCAAAGTGGTGGTTTCGG+AGG 0.598376 4_3:+17170922 Msa0632730:CDS
CATTTCCTCAAATTAATTAG+GGG 0.600742 4_3:+17167429 Msa0632730:five_prime_UTR
AAACTTGTAAGCGATGCAAA+GGG 0.601982 4_3:+17172004 Msa0632730:CDS
CCTTTCGAGCAGATGTTCCG+TGG 0.604194 4_3:+17170961 Msa0632730:CDS
TCTAGTAGAACCGGGAAGCG+AGG 0.604603 4_3:-17167393 None:intergenic
GATAGTAGCATATAGATCAC+CGG 0.605615 4_3:-17172995 None:intergenic
AGACAACAATGAGACCCTAA+AGG 0.610897 4_3:+17172933 Msa0632730:CDS
CGCAAATAAAGATGATCCTG+AGG 0.611520 4_3:+17170090 Msa0632730:intron
GACGAGTAAGGTGAGTGAAG+AGG 0.612764 4_3:-17167568 None:intergenic
AGTACTTGTGCTACATGCAA+GGG 0.618060 4_3:+17172151 Msa0632730:CDS
AATGAGACCCTAAAGGTACA+TGG 0.619370 4_3:+17172940 Msa0632730:CDS
TGGAAGATTCTAGTAGAACC+GGG 0.621429 4_3:-17167401 None:intergenic
GTGAAGAGGGTGATGCCAGT+AGG 0.632661 4_3:-17167554 None:intergenic
CTTTCACGGAAGCTATCCAA+GGG 0.653887 4_3:+17171774 Msa0632730:CDS
ACTAAAATTAAATACACACA+TGG 0.654532 4_3:-17173258 None:intergenic
TTCGAGCAGATGTTCCGTGG+TGG 0.661342 4_3:+17170964 Msa0632730:CDS
TATGTAAACAACCAAAGTGG+TGG 0.673516 4_3:+17170913 Msa0632730:CDS
GCGATGCAAAGGGTCAGGAG+TGG 0.682796 4_3:+17172014 Msa0632730:CDS
AAGTCATTACATGGCCACCA+CGG 0.693473 4_3:-17170978 None:intergenic
AATAAAGAAAGCTTACTATG+GGG 0.700800 4_3:+17168832 Msa0632730:CDS
TAGCATATAGATCACCGGAA+CGG 0.711908 4_3:-17172990 None:intergenic
AGAAGGATTAGATGTTCACG+TGG 0.719072 4_3:+17173142 Msa0632730:CDS
TATCAAGTAGTGTTTCAAAG+GGG 0.720594 4_3:+17167720 Msa0632730:CDS
GACGTGCTTTGTAATGCTTG+TGG 0.721251 4_3:+17171824 Msa0632730:CDS
GCCTATGTAAACAACCAAAG+TGG 0.723719 4_3:+17170910 Msa0632730:CDS
CCAGTAGGACGAATCATTTG+GGG 0.727748 4_3:-17167539 None:intergenic
GAGACCCTAAAGGTACATGG+AGG 0.766540 4_3:+17172943 Msa0632730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTTTTTTTTTTTTTTTG+TGG + chr4_3:17167813-17167832 Msa0632730:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGT+GGG + chr4_3:17167814-17167833 Msa0632730:intron 10.0%
!! TTTAGTAAAAAATAAAAACA+TGG - chr4_3:17167919-17167938 None:intergenic 10.0%
!! ATAAAAATTGATTAAAAACT+AGG + chr4_3:17169236-17169255 Msa0632730:intron 10.0%
!! ATATTGAATTAAAAATATGA+TGG - chr4_3:17171184-17171203 None:intergenic 10.0%
!! ATAATATTAGATTCATATTT+GGG - chr4_3:17171573-17171592 None:intergenic 10.0%
!! AATAATATTAGATTCATATT+TGG - chr4_3:17171574-17171593 None:intergenic 10.0%
!! GAATTTATTTACAAAAATTA+AGG - chr4_3:17172336-17172355 None:intergenic 10.0%
!!! GTCATTAATTTATAATTTTT+AGG + chr4_3:17173279-17173298 Msa0632730:exon 10.0%
!!! TACTTTTTTTTTTTTTTTTG+TGG + chr4_3:17167813-17167832 Msa0632730:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGT+GGG + chr4_3:17167814-17167833 Msa0632730:intron 10.0%
!! TTTAGTAAAAAATAAAAACA+TGG - chr4_3:17167919-17167938 None:intergenic 10.0%
!! ATAAAAATTGATTAAAAACT+AGG + chr4_3:17169236-17169255 Msa0632730:intron 10.0%
!! ATATTGAATTAAAAATATGA+TGG - chr4_3:17171184-17171203 None:intergenic 10.0%
!! ATAATATTAGATTCATATTT+GGG - chr4_3:17171573-17171592 None:intergenic 10.0%
!! AATAATATTAGATTCATATT+TGG - chr4_3:17171574-17171593 None:intergenic 10.0%
!! GAATTTATTTACAAAAATTA+AGG - chr4_3:17172336-17172355 None:intergenic 10.0%
!!! GTCATTAATTTATAATTTTT+AGG + chr4_3:17173279-17173298 Msa0632730:exon 10.0%
!!! AAAAAATTTCATTTTTTTGC+AGG + chr4_3:17167695-17167714 Msa0632730:intron 15.0%
!!! TATATGATTACTTTATTTTC+AGG - chr4_3:17168974-17168993 None:intergenic 15.0%
!! TTTGATTCAAAATTGAAATT+AGG + chr4_3:17169304-17169323 Msa0632730:intron 15.0%
!! ATTGTATAACATAGTATTTA+TGG - chr4_3:17169843-17169862 None:intergenic 15.0%
!!! ATTTTCATTTTAATGTTTGT+AGG + chr4_3:17170235-17170254 Msa0632730:intron 15.0%
!! TATTTAACTCTTAAAAATCA+TGG - chr4_3:17171402-17171421 None:intergenic 15.0%
!! GATCATAAAGATTATTAATA+TGG - chr4_3:17171734-17171753 None:intergenic 15.0%
!!! AAAAAATTTCATTTTTTTGC+AGG + chr4_3:17167695-17167714 Msa0632730:intron 15.0%
!!! TATATGATTACTTTATTTTC+AGG - chr4_3:17168974-17168993 None:intergenic 15.0%
!! TTTGATTCAAAATTGAAATT+AGG + chr4_3:17169304-17169323 Msa0632730:intron 15.0%
!! ATTGTATAACATAGTATTTA+TGG - chr4_3:17169843-17169862 None:intergenic 15.0%
!!! ATTTTCATTTTAATGTTTGT+AGG + chr4_3:17170235-17170254 Msa0632730:intron 15.0%
!! TATTTAACTCTTAAAAATCA+TGG - chr4_3:17171402-17171421 None:intergenic 15.0%
!! GATCATAAAGATTATTAATA+TGG - chr4_3:17171734-17171753 None:intergenic 15.0%
!!! TTTGAAGATTTTGATTGAAT+AGG - chr4_3:17167499-17167518 None:intergenic 20.0%
!!! ATTTTTGTTTGTATGAACTA+TGG + chr4_3:17167656-17167675 Msa0632730:intron 20.0%
!!! TTTTTACTAAAGATCCAATT+TGG + chr4_3:17167928-17167947 Msa0632730:intron 20.0%
!!! TTAGCTATTATTTTTTGTCT+GGG - chr4_3:17167986-17168005 None:intergenic 20.0%
!!! TTTAGCTATTATTTTTTGTC+TGG - chr4_3:17167987-17168006 None:intergenic 20.0%
!!! CTATTTTAGATGTTATTTCT+TGG + chr4_3:17168110-17168129 Msa0632730:intron 20.0%
!! ATTGTAAGAAAAACAAGAAA+AGG - chr4_3:17168244-17168263 None:intergenic 20.0%
!!! AAAGCTTAACAACATTTTTT+CGG - chr4_3:17168293-17168312 None:intergenic 20.0%
!! AAAAAAAAAAAAGCAAGACA+TGG - chr4_3:17168494-17168513 None:intergenic 20.0%
!!! ATAGTAAGCTTTCTTTATTT+CGG - chr4_3:17168831-17168850 None:intergenic 20.0%
!! AAATAAAGAAAGCTTACTAT+GGG + chr4_3:17168831-17168850 Msa0632730:CDS 20.0%
!! TGAATCTATGTATTGAAATA+TGG + chr4_3:17168884-17168903 Msa0632730:intron 20.0%
!! GAATCTATGTATTGAAATAT+GGG + chr4_3:17168885-17168904 Msa0632730:intron 20.0%
!! ATCTATACCTATATATCAAA+GGG - chr4_3:17169633-17169652 None:intergenic 20.0%
!! AACAAAGTTTCAAAGAAAAT+AGG - chr4_3:17170315-17170334 None:intergenic 20.0%
!! ATTCTAATGAATGAAAAAAG+TGG + chr4_3:17170411-17170430 Msa0632730:intron 20.0%
!!! AATAGTATGATTTAAGTTGT+TGG + chr4_3:17170466-17170485 Msa0632730:intron 20.0%
!!! TGTTTTTGTATTTTATTGAG+TGG + chr4_3:17170805-17170824 Msa0632730:intron 20.0%
!!! GTTTTTGTATTTTATTGAGT+GGG + chr4_3:17170806-17170825 Msa0632730:intron 20.0%
!! TAAAGTAAATCAAATGAAAG+AGG - chr4_3:17170859-17170878 None:intergenic 20.0%
!!! TTAATTTTTCATGAATGTGT+AGG + chr4_3:17170876-17170895 Msa0632730:intron 20.0%
!! CATATAGAAGAAAATCAATA+TGG - chr4_3:17172225-17172244 None:intergenic 20.0%
!! TAAAGTGAAATATGACTATA+TGG + chr4_3:17172417-17172436 Msa0632730:intron 20.0%
!! AAAGTGAAATATGACTATAT+GGG + chr4_3:17172418-17172437 Msa0632730:intron 20.0%
!! AATTCGAAATAATAATTACC+AGG - chr4_3:17172553-17172572 None:intergenic 20.0%
!!! TTTCTTTATGTCATTTGAAT+TGG + chr4_3:17172742-17172761 Msa0632730:intron 20.0%
!! CCTTAAAAGAAATAATAAGA+GGG - chr4_3:17172861-17172880 None:intergenic 20.0%
!! ACCTTAAAAGAAATAATAAG+AGG - chr4_3:17172862-17172881 None:intergenic 20.0%
!! ACTAAAATTAAATACACACA+TGG - chr4_3:17173261-17173280 None:intergenic 20.0%
!!! TTTGAAGATTTTGATTGAAT+AGG - chr4_3:17167499-17167518 None:intergenic 20.0%
!!! ATTTTTGTTTGTATGAACTA+TGG + chr4_3:17167656-17167675 Msa0632730:intron 20.0%
!!! TTTTTACTAAAGATCCAATT+TGG + chr4_3:17167928-17167947 Msa0632730:intron 20.0%
!!! TTAGCTATTATTTTTTGTCT+GGG - chr4_3:17167986-17168005 None:intergenic 20.0%
!!! TTTAGCTATTATTTTTTGTC+TGG - chr4_3:17167987-17168006 None:intergenic 20.0%
!!! CTATTTTAGATGTTATTTCT+TGG + chr4_3:17168110-17168129 Msa0632730:intron 20.0%
!! ATTGTAAGAAAAACAAGAAA+AGG - chr4_3:17168244-17168263 None:intergenic 20.0%
!!! AAAGCTTAACAACATTTTTT+CGG - chr4_3:17168293-17168312 None:intergenic 20.0%
!! AAAAAAAAAAAAGCAAGACA+TGG - chr4_3:17168494-17168513 None:intergenic 20.0%
!!! ATAGTAAGCTTTCTTTATTT+CGG - chr4_3:17168831-17168850 None:intergenic 20.0%
!! AAATAAAGAAAGCTTACTAT+GGG + chr4_3:17168831-17168850 Msa0632730:CDS 20.0%
!! TGAATCTATGTATTGAAATA+TGG + chr4_3:17168884-17168903 Msa0632730:intron 20.0%
!! GAATCTATGTATTGAAATAT+GGG + chr4_3:17168885-17168904 Msa0632730:intron 20.0%
!! ATCTATACCTATATATCAAA+GGG - chr4_3:17169633-17169652 None:intergenic 20.0%
!! AACAAAGTTTCAAAGAAAAT+AGG - chr4_3:17170315-17170334 None:intergenic 20.0%
!! ATTCTAATGAATGAAAAAAG+TGG + chr4_3:17170411-17170430 Msa0632730:intron 20.0%
!!! AATAGTATGATTTAAGTTGT+TGG + chr4_3:17170466-17170485 Msa0632730:intron 20.0%
!!! TGTTTTTGTATTTTATTGAG+TGG + chr4_3:17170805-17170824 Msa0632730:intron 20.0%
!!! GTTTTTGTATTTTATTGAGT+GGG + chr4_3:17170806-17170825 Msa0632730:intron 20.0%
!! TAAAGTAAATCAAATGAAAG+AGG - chr4_3:17170859-17170878 None:intergenic 20.0%
!!! TTAATTTTTCATGAATGTGT+AGG + chr4_3:17170876-17170895 Msa0632730:intron 20.0%
!! CATATAGAAGAAAATCAATA+TGG - chr4_3:17172225-17172244 None:intergenic 20.0%
!! TAAAGTGAAATATGACTATA+TGG + chr4_3:17172417-17172436 Msa0632730:intron 20.0%
!! AAAGTGAAATATGACTATAT+GGG + chr4_3:17172418-17172437 Msa0632730:intron 20.0%
!! AATTCGAAATAATAATTACC+AGG - chr4_3:17172553-17172572 None:intergenic 20.0%
!!! TTTCTTTATGTCATTTGAAT+TGG + chr4_3:17172742-17172761 Msa0632730:intron 20.0%
!! CCTTAAAAGAAATAATAAGA+GGG - chr4_3:17172861-17172880 None:intergenic 20.0%
!! ACCTTAAAAGAAATAATAAG+AGG - chr4_3:17172862-17172881 None:intergenic 20.0%
!! ACTAAAATTAAATACACACA+TGG - chr4_3:17173261-17173280 None:intergenic 20.0%
! TAATTTGAGGAAATGGAAAT+TGG - chr4_3:17167424-17167443 None:intergenic 25.0%
! TCCATTTCCTCAAATTAATT+AGG + chr4_3:17167427-17167446 Msa0632730:five_prime_UTR 25.0%
! CCATTTCCTCAAATTAATTA+GGG + chr4_3:17167428-17167447 Msa0632730:five_prime_UTR 25.0%
! CATTTCCTCAAATTAATTAG+GGG + chr4_3:17167429-17167448 Msa0632730:five_prime_UTR 25.0%
!! AAAAACCCCTAATTAATTTG+AGG - chr4_3:17167437-17167456 None:intergenic 25.0%
!! AATTAATTAGGGGTTTTTCT+AGG + chr4_3:17167439-17167458 Msa0632730:five_prime_UTR 25.0%
!! ATTAATTAGGGGTTTTTCTA+GGG + chr4_3:17167440-17167459 Msa0632730:five_prime_UTR 25.0%
! TTTGATTGAATAGGTGAATT+GGG - chr4_3:17167490-17167509 None:intergenic 25.0%
!!! TTTTGATTGAATAGGTGAAT+TGG - chr4_3:17167491-17167510 None:intergenic 25.0%
! ACTATGGTTTAACAAATTTG+TGG + chr4_3:17167672-17167691 Msa0632730:intron 25.0%
! TATATCAAGTAGTGTTTCAA+AGG + chr4_3:17167718-17167737 Msa0632730:CDS 25.0%
! ATATCAAGTAGTGTTTCAAA+GGG + chr4_3:17167719-17167738 Msa0632730:CDS 25.0%
!!! GAGGAACAAATTTGATTTTT+TGG + chr4_3:17168164-17168183 Msa0632730:intron 25.0%
!!! GAACAAATTTGATTTTTTGG+TGG + chr4_3:17168167-17168186 Msa0632730:intron 25.0%
!!! TTTTGGTGGTATAGTTATTT+TGG + chr4_3:17168181-17168200 Msa0632730:intron 25.0%
!!! TGTTTGTGTTATTTATAGCT+TGG + chr4_3:17168581-17168600 Msa0632730:intron 25.0%
! GAAATAAAGAAAGCTTACTA+TGG + chr4_3:17168830-17168849 Msa0632730:CDS 25.0%
! AATAAAGAAAGCTTACTATG+GGG + chr4_3:17168832-17168851 Msa0632730:CDS 25.0%
! TCATGTATTTGACAATTATG+AGG - chr4_3:17168867-17168886 None:intergenic 25.0%
! AAGAAGTTTAACAATGCAAT+GGG - chr4_3:17168936-17168955 None:intergenic 25.0%
!! GTAATCATATATTTTGTGAG+TGG + chr4_3:17168983-17169002 Msa0632730:intron 25.0%
!! TTTTATTGGGTGAAATACAT+GGG + chr4_3:17169440-17169459 Msa0632730:intron 25.0%
! TTCATTTAAACTCTTGAGTA+GGG - chr4_3:17169588-17169607 None:intergenic 25.0%
! TACTCAAGAGTTTAAATGAA+GGG + chr4_3:17169588-17169607 Msa0632730:intron 25.0%
! GTTTAAATGAAGGGTAAATT+TGG + chr4_3:17169597-17169616 Msa0632730:intron 25.0%
! CATCTATACCTATATATCAA+AGG - chr4_3:17169634-17169653 None:intergenic 25.0%
!! TGGTTTTCATCAGATTATAT+AGG + chr4_3:17169700-17169719 Msa0632730:intron 25.0%
! TAAGATAGATATCTGACTTT+GGG - chr4_3:17170181-17170200 None:intergenic 25.0%
! TTAAGATAGATATCTGACTT+TGG - chr4_3:17170182-17170201 None:intergenic 25.0%
!!! TTAATGTTTGTAGGTTTTGA+AGG + chr4_3:17170244-17170263 Msa0632730:intron 25.0%
! TATATCTGAGTTTAGTGAAA+AGG - chr4_3:17170354-17170373 None:intergenic 25.0%
! AGTAGCTCAAAATAAATTTC+CGG - chr4_3:17170508-17170527 None:intergenic 25.0%
! AAGAAGAAAACTTCAATACT+AGG + chr4_3:17170637-17170656 Msa0632730:intron 25.0%
!!! TGTATTTGTTTCTATGTTTG+TGG + chr4_3:17170736-17170755 Msa0632730:intron 25.0%
!! CATATTTTGTCAAAAGAAAC+TGG + chr4_3:17171106-17171125 Msa0632730:intron 25.0%
! TAAAAATATGATGGTTGTGT+AGG - chr4_3:17171175-17171194 None:intergenic 25.0%
! AACTCTTAAAAATCATGGTT+GGG - chr4_3:17171397-17171416 None:intergenic 25.0%
! TAACTCTTAAAAATCATGGT+TGG - chr4_3:17171398-17171417 None:intergenic 25.0%
!! CATATTTGGGATTAATTTGA+CGG - chr4_3:17171560-17171579 None:intergenic 25.0%
!! TTATTTCTCAATTCCTTTCA+TGG + chr4_3:17171589-17171608 Msa0632730:intron 25.0%
!!! AGCTTTTTCCATCAAAAATT+TGG + chr4_3:17171631-17171650 Msa0632730:CDS 25.0%
!! TTTTTCCATCAAAAATTTGG+CGG + chr4_3:17171634-17171653 Msa0632730:CDS 25.0%
! ACATTATTAAGCATATGCTA+AGG + chr4_3:17171692-17171711 Msa0632730:intron 25.0%
! CATTATTAAGCATATGCTAA+GGG + chr4_3:17171693-17171712 Msa0632730:intron 25.0%
!!! TGTTTGAAATGACAAAGTTT+TGG - chr4_3:17171804-17171823 None:intergenic 25.0%
! AAGTTAACAGATAATGACTA+TGG - chr4_3:17172374-17172393 None:intergenic 25.0%
! AGTCATTATCTGTTAACTTA+TGG + chr4_3:17172375-17172394 Msa0632730:intron 25.0%
! TATCTGTTAACTTATGGATA+TGG + chr4_3:17172381-17172400 Msa0632730:intron 25.0%
!!! GGTTTTTAATCTTTTGTTGT+TGG + chr4_3:17172452-17172471 Msa0632730:intron 25.0%
! TACATTACAAGTTACAACAA+TGG - chr4_3:17172585-17172604 None:intergenic 25.0%
!! ATTGTTGTAACTTGTAATGT+AGG + chr4_3:17172584-17172603 Msa0632730:intron 25.0%
! AAGTTTGACAGAAATCAATA+TGG - chr4_3:17172661-17172680 None:intergenic 25.0%
!!! ATATTGATTTCTGTCAAACT+TGG + chr4_3:17172660-17172679 Msa0632730:intron 25.0%
!!! CCCTCTTATTATTTCTTTTA+AGG + chr4_3:17172858-17172877 Msa0632730:intron 25.0%
!!! TATGATTTTTTCCATTTGCA+GGG + chr4_3:17172908-17172927 Msa0632730:intron 25.0%
! TAATTTGAGGAAATGGAAAT+TGG - chr4_3:17167424-17167443 None:intergenic 25.0%
! TCCATTTCCTCAAATTAATT+AGG + chr4_3:17167427-17167446 Msa0632730:five_prime_UTR 25.0%
! CCATTTCCTCAAATTAATTA+GGG + chr4_3:17167428-17167447 Msa0632730:five_prime_UTR 25.0%
! CATTTCCTCAAATTAATTAG+GGG + chr4_3:17167429-17167448 Msa0632730:five_prime_UTR 25.0%
!! AAAAACCCCTAATTAATTTG+AGG - chr4_3:17167437-17167456 None:intergenic 25.0%
!! AATTAATTAGGGGTTTTTCT+AGG + chr4_3:17167439-17167458 Msa0632730:five_prime_UTR 25.0%
!! ATTAATTAGGGGTTTTTCTA+GGG + chr4_3:17167440-17167459 Msa0632730:five_prime_UTR 25.0%
! TTTGATTGAATAGGTGAATT+GGG - chr4_3:17167490-17167509 None:intergenic 25.0%
!!! TTTTGATTGAATAGGTGAAT+TGG - chr4_3:17167491-17167510 None:intergenic 25.0%
! ACTATGGTTTAACAAATTTG+TGG + chr4_3:17167672-17167691 Msa0632730:intron 25.0%
! TATATCAAGTAGTGTTTCAA+AGG + chr4_3:17167718-17167737 Msa0632730:CDS 25.0%
! ATATCAAGTAGTGTTTCAAA+GGG + chr4_3:17167719-17167738 Msa0632730:CDS 25.0%
!!! GAGGAACAAATTTGATTTTT+TGG + chr4_3:17168164-17168183 Msa0632730:intron 25.0%
!!! GAACAAATTTGATTTTTTGG+TGG + chr4_3:17168167-17168186 Msa0632730:intron 25.0%
!!! TTTTGGTGGTATAGTTATTT+TGG + chr4_3:17168181-17168200 Msa0632730:intron 25.0%
!!! TGTTTGTGTTATTTATAGCT+TGG + chr4_3:17168581-17168600 Msa0632730:intron 25.0%
! GAAATAAAGAAAGCTTACTA+TGG + chr4_3:17168830-17168849 Msa0632730:CDS 25.0%
! AATAAAGAAAGCTTACTATG+GGG + chr4_3:17168832-17168851 Msa0632730:CDS 25.0%
! TCATGTATTTGACAATTATG+AGG - chr4_3:17168867-17168886 None:intergenic 25.0%
! AAGAAGTTTAACAATGCAAT+GGG - chr4_3:17168936-17168955 None:intergenic 25.0%
!! GTAATCATATATTTTGTGAG+TGG + chr4_3:17168983-17169002 Msa0632730:intron 25.0%
!! TTTTATTGGGTGAAATACAT+GGG + chr4_3:17169440-17169459 Msa0632730:intron 25.0%
! TTCATTTAAACTCTTGAGTA+GGG - chr4_3:17169588-17169607 None:intergenic 25.0%
! TACTCAAGAGTTTAAATGAA+GGG + chr4_3:17169588-17169607 Msa0632730:intron 25.0%
! GTTTAAATGAAGGGTAAATT+TGG + chr4_3:17169597-17169616 Msa0632730:intron 25.0%
! CATCTATACCTATATATCAA+AGG - chr4_3:17169634-17169653 None:intergenic 25.0%
!! TGGTTTTCATCAGATTATAT+AGG + chr4_3:17169700-17169719 Msa0632730:intron 25.0%
! TAAGATAGATATCTGACTTT+GGG - chr4_3:17170181-17170200 None:intergenic 25.0%
! TTAAGATAGATATCTGACTT+TGG - chr4_3:17170182-17170201 None:intergenic 25.0%
!!! TTAATGTTTGTAGGTTTTGA+AGG + chr4_3:17170244-17170263 Msa0632730:intron 25.0%
! TATATCTGAGTTTAGTGAAA+AGG - chr4_3:17170354-17170373 None:intergenic 25.0%
! AGTAGCTCAAAATAAATTTC+CGG - chr4_3:17170508-17170527 None:intergenic 25.0%
! AAGAAGAAAACTTCAATACT+AGG + chr4_3:17170637-17170656 Msa0632730:intron 25.0%
!!! TGTATTTGTTTCTATGTTTG+TGG + chr4_3:17170736-17170755 Msa0632730:intron 25.0%
!! CATATTTTGTCAAAAGAAAC+TGG + chr4_3:17171106-17171125 Msa0632730:intron 25.0%
! TAAAAATATGATGGTTGTGT+AGG - chr4_3:17171175-17171194 None:intergenic 25.0%
! AACTCTTAAAAATCATGGTT+GGG - chr4_3:17171397-17171416 None:intergenic 25.0%
! TAACTCTTAAAAATCATGGT+TGG - chr4_3:17171398-17171417 None:intergenic 25.0%
!! CATATTTGGGATTAATTTGA+CGG - chr4_3:17171560-17171579 None:intergenic 25.0%
!! TTATTTCTCAATTCCTTTCA+TGG + chr4_3:17171589-17171608 Msa0632730:intron 25.0%
!!! AGCTTTTTCCATCAAAAATT+TGG + chr4_3:17171631-17171650 Msa0632730:CDS 25.0%
!! TTTTTCCATCAAAAATTTGG+CGG + chr4_3:17171634-17171653 Msa0632730:CDS 25.0%
! ACATTATTAAGCATATGCTA+AGG + chr4_3:17171692-17171711 Msa0632730:intron 25.0%
! CATTATTAAGCATATGCTAA+GGG + chr4_3:17171693-17171712 Msa0632730:intron 25.0%
!!! TGTTTGAAATGACAAAGTTT+TGG - chr4_3:17171804-17171823 None:intergenic 25.0%
! AAGTTAACAGATAATGACTA+TGG - chr4_3:17172374-17172393 None:intergenic 25.0%
! AGTCATTATCTGTTAACTTA+TGG + chr4_3:17172375-17172394 Msa0632730:intron 25.0%
! TATCTGTTAACTTATGGATA+TGG + chr4_3:17172381-17172400 Msa0632730:intron 25.0%
!!! GGTTTTTAATCTTTTGTTGT+TGG + chr4_3:17172452-17172471 Msa0632730:intron 25.0%
! TACATTACAAGTTACAACAA+TGG - chr4_3:17172585-17172604 None:intergenic 25.0%
!! ATTGTTGTAACTTGTAATGT+AGG + chr4_3:17172584-17172603 Msa0632730:intron 25.0%
! AAGTTTGACAGAAATCAATA+TGG - chr4_3:17172661-17172680 None:intergenic 25.0%
!!! ATATTGATTTCTGTCAAACT+TGG + chr4_3:17172660-17172679 Msa0632730:intron 25.0%
!!! CCCTCTTATTATTTCTTTTA+AGG + chr4_3:17172858-17172877 Msa0632730:intron 25.0%
!!! TATGATTTTTTCCATTTGCA+GGG + chr4_3:17172908-17172927 Msa0632730:intron 25.0%
! CCCTAATTAATTTGAGGAAA+TGG - chr4_3:17167431-17167450 None:intergenic 30.0%
TTGATTGAATAGGTGAATTG+GGG - chr4_3:17167489-17167508 None:intergenic 30.0%
AAGAAGAAGAAAGATGTGTA+CGG - chr4_3:17167618-17167637 None:intergenic 30.0%
TATCAAGTAGTGTTTCAAAG+GGG + chr4_3:17167720-17167739 Msa0632730:CDS 30.0%
AATCCATCATCTACTGTTAT+TGG + chr4_3:17167756-17167775 Msa0632730:CDS 30.0%
CTATGAAACAAAAATACTCC+CGG + chr4_3:17167851-17167870 Msa0632730:intron 30.0%
TATGAAACAAAAATACTCCC+GGG + chr4_3:17167852-17167871 Msa0632730:intron 30.0%
AAAATTACGAAGGACCAAAT+TGG - chr4_3:17167945-17167964 None:intergenic 30.0%
! AGTCGTTGACATTTTTATAC+AGG + chr4_3:17168008-17168027 Msa0632730:intron 30.0%
! GTCGTTGACATTTTTATACA+GGG + chr4_3:17168009-17168028 Msa0632730:intron 30.0%
! TCGTTGACATTTTTATACAG+GGG + chr4_3:17168010-17168029 Msa0632730:intron 30.0%
TTTGACACGTTATAAACAGA+GGG - chr4_3:17168045-17168064 None:intergenic 30.0%
! TTTTGACACGTTATAAACAG+AGG - chr4_3:17168046-17168065 None:intergenic 30.0%
!! TTTAGATGTTATTTCTTGGC+TGG + chr4_3:17168114-17168133 Msa0632730:intron 30.0%
!! TTAGATGTTATTTCTTGGCT+GGG + chr4_3:17168115-17168134 Msa0632730:intron 30.0%
!!! GTGGTATAGTTATTTTGGAA+AGG + chr4_3:17168186-17168205 Msa0632730:intron 30.0%
!!! CAACATTTTTTCGGAAAAGA+TGG - chr4_3:17168284-17168303 None:intergenic 30.0%
AAAAAAAAAGCAAGACATGG+AGG - chr4_3:17168491-17168510 None:intergenic 30.0%
TTATTGCTCATGAAATCACA+CGG + chr4_3:17168523-17168542 Msa0632730:intron 30.0%
ACTACTTTCTATTGCATACT+AGG + chr4_3:17168613-17168632 Msa0632730:intron 30.0%
GAAGAAGTTTAACAATGCAA+TGG - chr4_3:17168937-17168956 None:intergenic 30.0%
! AAGCTTAATTTTTGCCATGA+TGG - chr4_3:17169152-17169171 None:intergenic 30.0%
GTATTTCACCCAATAAAAGA+GGG - chr4_3:17169438-17169457 None:intergenic 30.0%
TGTATTTCACCCAATAAAAG+AGG - chr4_3:17169439-17169458 None:intergenic 30.0%
! CTTTTATTGGGTGAAATACA+TGG + chr4_3:17169439-17169458 Msa0632730:intron 30.0%
!!! AAGTCCATCATTTTAGAACT+AGG - chr4_3:17169484-17169503 None:intergenic 30.0%
CTTCATTTAAACTCTTGAGT+AGG - chr4_3:17169589-17169608 None:intergenic 30.0%
CTACTCAAGAGTTTAAATGA+AGG + chr4_3:17169587-17169606 Msa0632730:intron 30.0%
ATGGTATCCCTTTGATATAT+AGG + chr4_3:17169623-17169642 Msa0632730:intron 30.0%
! CACATTTGCGATTTTTGATA+CGG + chr4_3:17169658-17169677 Msa0632730:intron 30.0%
AGTTCATGTCAAAGAAGAAA+GGG - chr4_3:17169896-17169915 None:intergenic 30.0%
AAGTTCATGTCAAAGAAGAA+AGG - chr4_3:17169897-17169916 None:intergenic 30.0%
!! TGACATGAACTTTTTAAGCA+AGG + chr4_3:17169905-17169924 Msa0632730:intron 30.0%
GAAGTTTCAAGAAGTTACAT+TGG + chr4_3:17170120-17170139 Msa0632730:CDS 30.0%
ATACCAGCAGTCATTAATTT+GGG - chr4_3:17170215-17170234 None:intergenic 30.0%
TATACCAGCAGTCATTAATT+TGG - chr4_3:17170216-17170235 None:intergenic 30.0%
TCAAAGAAAATAGGCAGTAA+TGG - chr4_3:17170306-17170325 None:intergenic 30.0%
AATGTGAAGTTTAATGCAGA+TGG + chr4_3:17170439-17170458 Msa0632730:intron 30.0%
ACTTGATAGAGAAAGAAAGA+CGG + chr4_3:17170525-17170544 Msa0632730:intron 30.0%
!!! GTTTTAGTTTTGCTTTCTTG+TGG + chr4_3:17170571-17170590 Msa0632730:intron 30.0%
! TTTTTCATGAATGTGTAGGT+TGG + chr4_3:17170880-17170899 Msa0632730:intron 30.0%
GTAATCAAACAGATCTAAAC+AGG - chr4_3:17171274-17171293 None:intergenic 30.0%
ACTGTTAAAGAGTTCCAAAT+CGG + chr4_3:17171292-17171311 Msa0632730:intron 30.0%
CTGAACATGTGTTTATAAGT+GGG + chr4_3:17171327-17171346 Msa0632730:intron 30.0%
TGAACATGTGTTTATAAGTG+GGG + chr4_3:17171328-17171347 Msa0632730:intron 30.0%
AGAATACAAAATACCAGTGA+AGG - chr4_3:17171880-17171899 None:intergenic 30.0%
! ACTGGTATTTTGTATTCTGT+TGG + chr4_3:17171882-17171901 Msa0632730:intron 30.0%
! CTGGTATTTTGTATTCTGTT+GGG + chr4_3:17171883-17171902 Msa0632730:intron 30.0%
ACAAACTGGAATATTCAGAA+TGG + chr4_3:17172126-17172145 Msa0632730:CDS 30.0%
GTGTTTATGTGTGTATTCTT+TGG - chr4_3:17172778-17172797 None:intergenic 30.0%
TTGTATTTATTCTCTGCTGT+TGG + chr4_3:17172825-17172844 Msa0632730:intron 30.0%
!!! GTATGATTTTTTCCATTTGC+AGG + chr4_3:17172907-17172926 Msa0632730:intron 30.0%
TGATCTATATGCTACTATCA+AGG + chr4_3:17172999-17173018 Msa0632730:CDS 30.0%
!! TATACACTTTTTGCAGGTTA+GGG + chr4_3:17173100-17173119 Msa0632730:intron 30.0%
!! AACGATTTTACTTGGTTTTC+TGG + chr4_3:17173216-17173235 Msa0632730:CDS 30.0%
! CCCTAATTAATTTGAGGAAA+TGG - chr4_3:17167431-17167450 None:intergenic 30.0%
TTGATTGAATAGGTGAATTG+GGG - chr4_3:17167489-17167508 None:intergenic 30.0%
AAGAAGAAGAAAGATGTGTA+CGG - chr4_3:17167618-17167637 None:intergenic 30.0%
TATCAAGTAGTGTTTCAAAG+GGG + chr4_3:17167720-17167739 Msa0632730:CDS 30.0%
AATCCATCATCTACTGTTAT+TGG + chr4_3:17167756-17167775 Msa0632730:CDS 30.0%
CTATGAAACAAAAATACTCC+CGG + chr4_3:17167851-17167870 Msa0632730:intron 30.0%
TATGAAACAAAAATACTCCC+GGG + chr4_3:17167852-17167871 Msa0632730:intron 30.0%
AAAATTACGAAGGACCAAAT+TGG - chr4_3:17167945-17167964 None:intergenic 30.0%
! AGTCGTTGACATTTTTATAC+AGG + chr4_3:17168008-17168027 Msa0632730:intron 30.0%
! GTCGTTGACATTTTTATACA+GGG + chr4_3:17168009-17168028 Msa0632730:intron 30.0%
! TCGTTGACATTTTTATACAG+GGG + chr4_3:17168010-17168029 Msa0632730:intron 30.0%
TTTGACACGTTATAAACAGA+GGG - chr4_3:17168045-17168064 None:intergenic 30.0%
! TTTTGACACGTTATAAACAG+AGG - chr4_3:17168046-17168065 None:intergenic 30.0%
!! TTTAGATGTTATTTCTTGGC+TGG + chr4_3:17168114-17168133 Msa0632730:intron 30.0%
!! TTAGATGTTATTTCTTGGCT+GGG + chr4_3:17168115-17168134 Msa0632730:intron 30.0%
!!! GTGGTATAGTTATTTTGGAA+AGG + chr4_3:17168186-17168205 Msa0632730:intron 30.0%
!!! CAACATTTTTTCGGAAAAGA+TGG - chr4_3:17168284-17168303 None:intergenic 30.0%
AAAAAAAAAGCAAGACATGG+AGG - chr4_3:17168491-17168510 None:intergenic 30.0%
TTATTGCTCATGAAATCACA+CGG + chr4_3:17168523-17168542 Msa0632730:intron 30.0%
ACTACTTTCTATTGCATACT+AGG + chr4_3:17168613-17168632 Msa0632730:intron 30.0%
GAAGAAGTTTAACAATGCAA+TGG - chr4_3:17168937-17168956 None:intergenic 30.0%
! AAGCTTAATTTTTGCCATGA+TGG - chr4_3:17169152-17169171 None:intergenic 30.0%
GTATTTCACCCAATAAAAGA+GGG - chr4_3:17169438-17169457 None:intergenic 30.0%
TGTATTTCACCCAATAAAAG+AGG - chr4_3:17169439-17169458 None:intergenic 30.0%
! CTTTTATTGGGTGAAATACA+TGG + chr4_3:17169439-17169458 Msa0632730:intron 30.0%
!!! AAGTCCATCATTTTAGAACT+AGG - chr4_3:17169484-17169503 None:intergenic 30.0%
CTTCATTTAAACTCTTGAGT+AGG - chr4_3:17169589-17169608 None:intergenic 30.0%
CTACTCAAGAGTTTAAATGA+AGG + chr4_3:17169587-17169606 Msa0632730:intron 30.0%
ATGGTATCCCTTTGATATAT+AGG + chr4_3:17169623-17169642 Msa0632730:intron 30.0%
! CACATTTGCGATTTTTGATA+CGG + chr4_3:17169658-17169677 Msa0632730:intron 30.0%
AGTTCATGTCAAAGAAGAAA+GGG - chr4_3:17169896-17169915 None:intergenic 30.0%
AAGTTCATGTCAAAGAAGAA+AGG - chr4_3:17169897-17169916 None:intergenic 30.0%
!! TGACATGAACTTTTTAAGCA+AGG + chr4_3:17169905-17169924 Msa0632730:intron 30.0%
GAAGTTTCAAGAAGTTACAT+TGG + chr4_3:17170120-17170139 Msa0632730:CDS 30.0%
ATACCAGCAGTCATTAATTT+GGG - chr4_3:17170215-17170234 None:intergenic 30.0%
TATACCAGCAGTCATTAATT+TGG - chr4_3:17170216-17170235 None:intergenic 30.0%
TCAAAGAAAATAGGCAGTAA+TGG - chr4_3:17170306-17170325 None:intergenic 30.0%
AATGTGAAGTTTAATGCAGA+TGG + chr4_3:17170439-17170458 Msa0632730:intron 30.0%
ACTTGATAGAGAAAGAAAGA+CGG + chr4_3:17170525-17170544 Msa0632730:intron 30.0%
!!! GTTTTAGTTTTGCTTTCTTG+TGG + chr4_3:17170571-17170590 Msa0632730:intron 30.0%
! TTTTTCATGAATGTGTAGGT+TGG + chr4_3:17170880-17170899 Msa0632730:intron 30.0%
GTAATCAAACAGATCTAAAC+AGG - chr4_3:17171274-17171293 None:intergenic 30.0%
ACTGTTAAAGAGTTCCAAAT+CGG + chr4_3:17171292-17171311 Msa0632730:intron 30.0%
CTGAACATGTGTTTATAAGT+GGG + chr4_3:17171327-17171346 Msa0632730:intron 30.0%
TGAACATGTGTTTATAAGTG+GGG + chr4_3:17171328-17171347 Msa0632730:intron 30.0%
AGAATACAAAATACCAGTGA+AGG - chr4_3:17171880-17171899 None:intergenic 30.0%
! ACTGGTATTTTGTATTCTGT+TGG + chr4_3:17171882-17171901 Msa0632730:intron 30.0%
! CTGGTATTTTGTATTCTGTT+GGG + chr4_3:17171883-17171902 Msa0632730:intron 30.0%
ACAAACTGGAATATTCAGAA+TGG + chr4_3:17172126-17172145 Msa0632730:CDS 30.0%
GTGTTTATGTGTGTATTCTT+TGG - chr4_3:17172778-17172797 None:intergenic 30.0%
TTGTATTTATTCTCTGCTGT+TGG + chr4_3:17172825-17172844 Msa0632730:intron 30.0%
!!! GTATGATTTTTTCCATTTGC+AGG + chr4_3:17172907-17172926 Msa0632730:intron 30.0%
TGATCTATATGCTACTATCA+AGG + chr4_3:17172999-17173018 Msa0632730:CDS 30.0%
!! TATACACTTTTTGCAGGTTA+GGG + chr4_3:17173100-17173119 Msa0632730:intron 30.0%
!! AACGATTTTACTTGGTTTTC+TGG + chr4_3:17173216-17173235 Msa0632730:CDS 30.0%
TTGGAAGATTCTAGTAGAAC+CGG - chr4_3:17167405-17167424 None:intergenic 35.0%
! TAGGTGAATTGGGGATTTTT+GGG - chr4_3:17167480-17167499 None:intergenic 35.0%
! ATAGGTGAATTGGGGATTTT+TGG - chr4_3:17167481-17167500 None:intergenic 35.0%
CATTTGGGGAATTGAATTGA+AGG - chr4_3:17167528-17167547 None:intergenic 35.0%
AAAGATGTGTACGGAATGAT+TGG - chr4_3:17167609-17167628 None:intergenic 35.0%
TAGTGTTTCAAAGGGGTTAT+AGG + chr4_3:17167727-17167746 Msa0632730:CDS 35.0%
CTACCAATAACAGTAGATGA+TGG - chr4_3:17167762-17167781 None:intergenic 35.0%
GGTAGTAGTTATGCAACAAA+TGG + chr4_3:17167777-17167796 Msa0632730:CDS 35.0%
ATGAAACAAAAATACTCCCG+GGG + chr4_3:17167853-17167872 Msa0632730:intron 35.0%
TAAAAACATGGTGCTCAATG+AGG - chr4_3:17167907-17167926 None:intergenic 35.0%
TTCATGACAGTTTCATTCAG+GGG - chr4_3:17168090-17168109 None:intergenic 35.0%
GTTCATGACAGTTTCATTCA+GGG - chr4_3:17168091-17168110 None:intergenic 35.0%
AGTTCATGACAGTTTCATTC+AGG - chr4_3:17168092-17168111 None:intergenic 35.0%
ATGGTGTTCATTTGAAGAAC+TGG + chr4_3:17168382-17168401 Msa0632730:CDS 35.0%
TTTGAAGAACTGGTTGCTAT+TGG + chr4_3:17168392-17168411 Msa0632730:CDS 35.0%
! TTGAAGAACTGGTTGCTATT+GGG + chr4_3:17168393-17168412 Msa0632730:CDS 35.0%
! GAGCGGCTAATTCATATTTT+GGG + chr4_3:17168415-17168434 Msa0632730:CDS 35.0%
! AGCGGCTAATTCATATTTTG+GGG + chr4_3:17168416-17168435 Msa0632730:CDS 35.0%
AACTAGATCTATTCATGGCT+CGG + chr4_3:17168440-17168459 Msa0632730:CDS 35.0%
CATACTAGGATAGTAGATGT+AGG + chr4_3:17168627-17168646 Msa0632730:intron 35.0%
ACGATGCTGCAAAATAGTTT+GGG - chr4_3:17168757-17168776 None:intergenic 35.0%
AACGATGCTGCAAAATAGTT+TGG - chr4_3:17168758-17168777 None:intergenic 35.0%
! AAACTATTTTGCAGCATCGT+TGG + chr4_3:17168757-17168776 Msa0632730:intron 35.0%
TCAACCATTTCCTATGATGT+GGG + chr4_3:17169010-17169029 Msa0632730:intron 35.0%
! CTTAATTTTTGCCATGATGG+AGG - chr4_3:17169149-17169168 None:intergenic 35.0%
GAAATTAGGATACAACAACC+AGG + chr4_3:17169318-17169337 Msa0632730:intron 35.0%
! TCTAACACTCCCTCTTTTAT+TGG + chr4_3:17169426-17169445 Msa0632730:intron 35.0%
! CTAACACTCCCTCTTTTATT+GGG + chr4_3:17169427-17169446 Msa0632730:intron 35.0%
TGCATGTGTGTAACATCATT+TGG - chr4_3:17169512-17169531 None:intergenic 35.0%
! CTTTTCAACACTCGCTTATT+GGG - chr4_3:17169540-17169559 None:intergenic 35.0%
! TCTTTTCAACACTCGCTTAT+TGG - chr4_3:17169541-17169560 None:intergenic 35.0%
TGAAGGGTAAATTTGGAAGA+TGG + chr4_3:17169604-17169623 Msa0632730:intron 35.0%
! GAGTTGTGTTTTATGTGTTC+TGG + chr4_3:17169680-17169699 Msa0632730:intron 35.0%
GAAGAAAGGGAAAAGGTAAA+GGG - chr4_3:17169883-17169902 None:intergenic 35.0%
AGAAGAAAGGGAAAAGGTAA+AGG - chr4_3:17169884-17169903 None:intergenic 35.0%
TGTCAAAGAAGAAAGGGAAA+AGG - chr4_3:17169890-17169909 None:intergenic 35.0%
TCTTTGCAAGCTACAGAATA+TGG - chr4_3:17170057-17170076 None:intergenic 35.0%
AGAAGTTACATTGGCATATG+AGG + chr4_3:17170129-17170148 Msa0632730:CDS 35.0%
TATCCCAAATTAATGACTGC+TGG + chr4_3:17170209-17170228 Msa0632730:intron 35.0%
!!! TGTTTGTAGGTTTTGAAGGA+TGG + chr4_3:17170248-17170267 Msa0632730:intron 35.0%
!!! GTTTGTAGGTTTTGAAGGAT+GGG + chr4_3:17170249-17170268 Msa0632730:intron 35.0%
!!! TTTGTAGGTTTTGAAGGATG+GGG + chr4_3:17170250-17170269 Msa0632730:intron 35.0%
AAAACGTCAACAGTATGATC+AGG + chr4_3:17170274-17170293 Msa0632730:CDS 35.0%
TGAAGTTTAATGCAGATGGA+GGG + chr4_3:17170443-17170462 Msa0632730:intron 35.0%
TTCTTTCCAATGAATCCTAG+GGG - chr4_3:17170622-17170641 None:intergenic 35.0%
CTTCTTTCCAATGAATCCTA+GGG - chr4_3:17170623-17170642 None:intergenic 35.0%
TCTTCTTTCCAATGAATCCT+AGG - chr4_3:17170624-17170643 None:intergenic 35.0%
ACCACTTTGGTTGTTTACAT+AGG - chr4_3:17170914-17170933 None:intergenic 35.0%
TATGTAAACAACCAAAGTGG+TGG + chr4_3:17170913-17170932 Msa0632730:CDS 35.0%
GAATGTAGCAAGTCATTACA+TGG - chr4_3:17170990-17171009 None:intergenic 35.0%
CCACTTATAAACACATGTTC+AGG - chr4_3:17171329-17171348 None:intergenic 35.0%
CCTGAACATGTGTTTATAAG+TGG + chr4_3:17171326-17171345 Msa0632730:intron 35.0%
GAACATGTGTTTATAAGTGG+GGG + chr4_3:17171329-17171348 Msa0632730:intron 35.0%
AATATCCTGATCACCATGAA+AGG - chr4_3:17171605-17171624 None:intergenic 35.0%
ATCTTTATGATCACAGACTG+TGG + chr4_3:17171742-17171761 Msa0632730:intron 35.0%
TGTGGTTGAACTATCTTTCA+CGG + chr4_3:17171760-17171779 Msa0632730:CDS 35.0%
! AGTGAGATGTGTTGATATCA+AGG - chr4_3:17171933-17171952 None:intergenic 35.0%
AAACTTGTAAGCGATGCAAA+GGG + chr4_3:17172004-17172023 Msa0632730:CDS 35.0%
TCAATTGAACAACACTTCTC+AGG - chr4_3:17172079-17172098 None:intergenic 35.0%
TTCCAGTTTGTACAAACATC+TGG - chr4_3:17172117-17172136 None:intergenic 35.0%
GGGAACTGGAAAAATTGTAT+CGG + chr4_3:17172171-17172190 Msa0632730:CDS 35.0%
! CTGGAAAAATTGTATCGGTA+TGG + chr4_3:17172176-17172195 Msa0632730:intron 35.0%
TGTTCTTGTATCCATTTACG+TGG + chr4_3:17172284-17172303 Msa0632730:intron 35.0%
CTGTTAACTTATGGATATGG+TGG + chr4_3:17172384-17172403 Msa0632730:intron 35.0%
ACTATATGGGAATGTACTGA+TGG + chr4_3:17172431-17172450 Msa0632730:intron 35.0%
CTTTGTTCCTTTGACAACTT+TGG - chr4_3:17172509-17172528 None:intergenic 35.0%
TAATGTAGGCCATGGTTATA+TGG + chr4_3:17172598-17172617 Msa0632730:intron 35.0%
GATAGTAGCATATAGATCAC+CGG - chr4_3:17172998-17173017 None:intergenic 35.0%
!! TTCCTCTATACACTTTTTGC+AGG + chr4_3:17173094-17173113 Msa0632730:intron 35.0%
! AACCTGCAAAAAGTGTATAG+AGG - chr4_3:17173099-17173118 None:intergenic 35.0%
!! CTATACACTTTTTGCAGGTT+AGG + chr4_3:17173099-17173118 Msa0632730:intron 35.0%
!!! TGCTGTTTTAAGTTTCACTC+AGG + chr4_3:17173166-17173185 Msa0632730:CDS 35.0%
! TGTTGAGCAACGATTTTACT+TGG + chr4_3:17173208-17173227 Msa0632730:CDS 35.0%
TTGGAAGATTCTAGTAGAAC+CGG - chr4_3:17167405-17167424 None:intergenic 35.0%
! TAGGTGAATTGGGGATTTTT+GGG - chr4_3:17167480-17167499 None:intergenic 35.0%
! ATAGGTGAATTGGGGATTTT+TGG - chr4_3:17167481-17167500 None:intergenic 35.0%
CATTTGGGGAATTGAATTGA+AGG - chr4_3:17167528-17167547 None:intergenic 35.0%
AAAGATGTGTACGGAATGAT+TGG - chr4_3:17167609-17167628 None:intergenic 35.0%
TAGTGTTTCAAAGGGGTTAT+AGG + chr4_3:17167727-17167746 Msa0632730:CDS 35.0%
CTACCAATAACAGTAGATGA+TGG - chr4_3:17167762-17167781 None:intergenic 35.0%
GGTAGTAGTTATGCAACAAA+TGG + chr4_3:17167777-17167796 Msa0632730:CDS 35.0%
ATGAAACAAAAATACTCCCG+GGG + chr4_3:17167853-17167872 Msa0632730:intron 35.0%
TAAAAACATGGTGCTCAATG+AGG - chr4_3:17167907-17167926 None:intergenic 35.0%
TTCATGACAGTTTCATTCAG+GGG - chr4_3:17168090-17168109 None:intergenic 35.0%
GTTCATGACAGTTTCATTCA+GGG - chr4_3:17168091-17168110 None:intergenic 35.0%
AGTTCATGACAGTTTCATTC+AGG - chr4_3:17168092-17168111 None:intergenic 35.0%
ATGGTGTTCATTTGAAGAAC+TGG + chr4_3:17168382-17168401 Msa0632730:CDS 35.0%
TTTGAAGAACTGGTTGCTAT+TGG + chr4_3:17168392-17168411 Msa0632730:CDS 35.0%
! TTGAAGAACTGGTTGCTATT+GGG + chr4_3:17168393-17168412 Msa0632730:CDS 35.0%
! GAGCGGCTAATTCATATTTT+GGG + chr4_3:17168415-17168434 Msa0632730:CDS 35.0%
! AGCGGCTAATTCATATTTTG+GGG + chr4_3:17168416-17168435 Msa0632730:CDS 35.0%
AACTAGATCTATTCATGGCT+CGG + chr4_3:17168440-17168459 Msa0632730:CDS 35.0%
CATACTAGGATAGTAGATGT+AGG + chr4_3:17168627-17168646 Msa0632730:intron 35.0%
ACGATGCTGCAAAATAGTTT+GGG - chr4_3:17168757-17168776 None:intergenic 35.0%
AACGATGCTGCAAAATAGTT+TGG - chr4_3:17168758-17168777 None:intergenic 35.0%
! AAACTATTTTGCAGCATCGT+TGG + chr4_3:17168757-17168776 Msa0632730:intron 35.0%
TCAACCATTTCCTATGATGT+GGG + chr4_3:17169010-17169029 Msa0632730:intron 35.0%
! CTTAATTTTTGCCATGATGG+AGG - chr4_3:17169149-17169168 None:intergenic 35.0%
GAAATTAGGATACAACAACC+AGG + chr4_3:17169318-17169337 Msa0632730:intron 35.0%
! TCTAACACTCCCTCTTTTAT+TGG + chr4_3:17169426-17169445 Msa0632730:intron 35.0%
! CTAACACTCCCTCTTTTATT+GGG + chr4_3:17169427-17169446 Msa0632730:intron 35.0%
TGCATGTGTGTAACATCATT+TGG - chr4_3:17169512-17169531 None:intergenic 35.0%
! CTTTTCAACACTCGCTTATT+GGG - chr4_3:17169540-17169559 None:intergenic 35.0%
! TCTTTTCAACACTCGCTTAT+TGG - chr4_3:17169541-17169560 None:intergenic 35.0%
TGAAGGGTAAATTTGGAAGA+TGG + chr4_3:17169604-17169623 Msa0632730:intron 35.0%
! GAGTTGTGTTTTATGTGTTC+TGG + chr4_3:17169680-17169699 Msa0632730:intron 35.0%
GAAGAAAGGGAAAAGGTAAA+GGG - chr4_3:17169883-17169902 None:intergenic 35.0%
AGAAGAAAGGGAAAAGGTAA+AGG - chr4_3:17169884-17169903 None:intergenic 35.0%
TGTCAAAGAAGAAAGGGAAA+AGG - chr4_3:17169890-17169909 None:intergenic 35.0%
TCTTTGCAAGCTACAGAATA+TGG - chr4_3:17170057-17170076 None:intergenic 35.0%
AGAAGTTACATTGGCATATG+AGG + chr4_3:17170129-17170148 Msa0632730:CDS 35.0%
TATCCCAAATTAATGACTGC+TGG + chr4_3:17170209-17170228 Msa0632730:intron 35.0%
!!! TGTTTGTAGGTTTTGAAGGA+TGG + chr4_3:17170248-17170267 Msa0632730:intron 35.0%
!!! GTTTGTAGGTTTTGAAGGAT+GGG + chr4_3:17170249-17170268 Msa0632730:intron 35.0%
!!! TTTGTAGGTTTTGAAGGATG+GGG + chr4_3:17170250-17170269 Msa0632730:intron 35.0%
AAAACGTCAACAGTATGATC+AGG + chr4_3:17170274-17170293 Msa0632730:CDS 35.0%
TGAAGTTTAATGCAGATGGA+GGG + chr4_3:17170443-17170462 Msa0632730:intron 35.0%
TTCTTTCCAATGAATCCTAG+GGG - chr4_3:17170622-17170641 None:intergenic 35.0%
CTTCTTTCCAATGAATCCTA+GGG - chr4_3:17170623-17170642 None:intergenic 35.0%
TCTTCTTTCCAATGAATCCT+AGG - chr4_3:17170624-17170643 None:intergenic 35.0%
ACCACTTTGGTTGTTTACAT+AGG - chr4_3:17170914-17170933 None:intergenic 35.0%
TATGTAAACAACCAAAGTGG+TGG + chr4_3:17170913-17170932 Msa0632730:CDS 35.0%
GAATGTAGCAAGTCATTACA+TGG - chr4_3:17170990-17171009 None:intergenic 35.0%
CCACTTATAAACACATGTTC+AGG - chr4_3:17171329-17171348 None:intergenic 35.0%
CCTGAACATGTGTTTATAAG+TGG + chr4_3:17171326-17171345 Msa0632730:intron 35.0%
GAACATGTGTTTATAAGTGG+GGG + chr4_3:17171329-17171348 Msa0632730:intron 35.0%
AATATCCTGATCACCATGAA+AGG - chr4_3:17171605-17171624 None:intergenic 35.0%
ATCTTTATGATCACAGACTG+TGG + chr4_3:17171742-17171761 Msa0632730:intron 35.0%
TGTGGTTGAACTATCTTTCA+CGG + chr4_3:17171760-17171779 Msa0632730:CDS 35.0%
! AGTGAGATGTGTTGATATCA+AGG - chr4_3:17171933-17171952 None:intergenic 35.0%
AAACTTGTAAGCGATGCAAA+GGG + chr4_3:17172004-17172023 Msa0632730:CDS 35.0%
TCAATTGAACAACACTTCTC+AGG - chr4_3:17172079-17172098 None:intergenic 35.0%
TTCCAGTTTGTACAAACATC+TGG - chr4_3:17172117-17172136 None:intergenic 35.0%
GGGAACTGGAAAAATTGTAT+CGG + chr4_3:17172171-17172190 Msa0632730:CDS 35.0%
! CTGGAAAAATTGTATCGGTA+TGG + chr4_3:17172176-17172195 Msa0632730:intron 35.0%
TGTTCTTGTATCCATTTACG+TGG + chr4_3:17172284-17172303 Msa0632730:intron 35.0%
CTGTTAACTTATGGATATGG+TGG + chr4_3:17172384-17172403 Msa0632730:intron 35.0%
ACTATATGGGAATGTACTGA+TGG + chr4_3:17172431-17172450 Msa0632730:intron 35.0%
CTTTGTTCCTTTGACAACTT+TGG - chr4_3:17172509-17172528 None:intergenic 35.0%
TAATGTAGGCCATGGTTATA+TGG + chr4_3:17172598-17172617 Msa0632730:intron 35.0%
GATAGTAGCATATAGATCAC+CGG - chr4_3:17172998-17173017 None:intergenic 35.0%
!! TTCCTCTATACACTTTTTGC+AGG + chr4_3:17173094-17173113 Msa0632730:intron 35.0%
! AACCTGCAAAAAGTGTATAG+AGG - chr4_3:17173099-17173118 None:intergenic 35.0%
!! CTATACACTTTTTGCAGGTT+AGG + chr4_3:17173099-17173118 Msa0632730:intron 35.0%
!!! TGCTGTTTTAAGTTTCACTC+AGG + chr4_3:17173166-17173185 Msa0632730:CDS 35.0%
! TGTTGAGCAACGATTTTACT+TGG + chr4_3:17173208-17173227 Msa0632730:CDS 35.0%
TGGAAGATTCTAGTAGAACC+GGG - chr4_3:17167404-17167423 None:intergenic 40.0%
! AGGTGAATTGGGGATTTTTG+GGG - chr4_3:17167479-17167498 None:intergenic 40.0%
GAGTCGCGATAAAATTACGA+AGG - chr4_3:17167955-17167974 None:intergenic 40.0%
! GGAGCGGCTAATTCATATTT+TGG + chr4_3:17168414-17168433 Msa0632730:CDS 40.0%
ACTAGATCTATTCATGGCTC+GGG + chr4_3:17168441-17168460 Msa0632730:CDS 40.0%
CAACTATGCACAAGAAAGCA+AGG - chr4_3:17168693-17168712 None:intergenic 40.0%
AGGAGCTATTACGATGTTCT+TGG + chr4_3:17168782-17168801 Msa0632730:CDS 40.0%
AAGAAAGCTTACTATGGGGT+AGG + chr4_3:17168836-17168855 Msa0632730:CDS 40.0%
CTCAACCATTTCCTATGATG+TGG + chr4_3:17169009-17169028 Msa0632730:intron 40.0%
TCATCCCACATCATAGGAAA+TGG - chr4_3:17169017-17169036 None:intergenic 40.0%
ACACTGACCTGTTATTCTGT+CGG + chr4_3:17169100-17169119 Msa0632730:intron 40.0%
AGAAAAGCCGACAGAATAAC+AGG - chr4_3:17169110-17169129 None:intergenic 40.0%
! CTTTTCTCGAATACCATAGC+TGG + chr4_3:17169123-17169142 Msa0632730:intron 40.0%
!! AGCGAGTGTTGAAAAGAGAT+TGG + chr4_3:17169544-17169563 Msa0632730:intron 40.0%
TCAAGCCCTATTACACTAAG+TGG + chr4_3:17169792-17169811 Msa0632730:intron 40.0%
CAAGCCCTATTACACTAAGT+GGG + chr4_3:17169793-17169812 Msa0632730:intron 40.0%
AAGCCCTATTACACTAAGTG+GGG + chr4_3:17169794-17169813 Msa0632730:intron 40.0%
!!! AAGGCTTGGTTTTTGGTTGT+TGG + chr4_3:17170007-17170026 Msa0632730:intron 40.0%
! CATCTTTATTTGCGTCTGGA+TGG - chr4_3:17170084-17170103 None:intergenic 40.0%
! GGATCATCTTTATTTGCGTC+TGG - chr4_3:17170088-17170107 None:intergenic 40.0%
CGCAAATAAAGATGATCCTG+AGG + chr4_3:17170090-17170109 Msa0632730:intron 40.0%
! TGAAACTTCTTTTCAGCCTC+AGG - chr4_3:17170109-17170128 None:intergenic 40.0%
GTGAAGTTTAATGCAGATGG+AGG + chr4_3:17170442-17170461 Msa0632730:intron 40.0%
! TAAGTTGTTGGCCTCTTTCA+TGG + chr4_3:17170478-17170497 Msa0632730:intron 40.0%
TGATAGAGAAAGAAAGACGG+AGG + chr4_3:17170528-17170547 Msa0632730:intron 40.0%
GATAGAGAAAGAAAGACGGA+GGG + chr4_3:17170529-17170548 Msa0632730:intron 40.0%
TCTTTCCAATGAATCCTAGG+GGG - chr4_3:17170621-17170640 None:intergenic 40.0%
TGAAAGAGGCAGTAGATACT+AGG - chr4_3:17170845-17170864 None:intergenic 40.0%
GCCTATGTAAACAACCAAAG+TGG + chr4_3:17170910-17170929 Msa0632730:CDS 40.0%
AACAACCAAAGTGGTGGTTT+CGG + chr4_3:17170919-17170938 Msa0632730:CDS 40.0%
ATGGTTGTGTAGGATTGCTT+AGG - chr4_3:17171165-17171184 None:intergenic 40.0%
GAATGTGCTGAAACTTCAGT+CGG + chr4_3:17171243-17171262 Msa0632730:intron 40.0%
GTTCCAAATCGGACAAAAGA+TGG + chr4_3:17171303-17171322 Msa0632730:intron 40.0%
CTAACACAACCCCACAAAAT+CGG - chr4_3:17171373-17171392 None:intergenic 40.0%
CAATTCCTTTCATGGTGATC+AGG + chr4_3:17171597-17171616 Msa0632730:intron 40.0%
! CTTCTCCGCCAAATTTTTGA+TGG - chr4_3:17171642-17171661 None:intergenic 40.0%
TATGAATTGTCGTCCTTCAC+TGG + chr4_3:17171864-17171883 Msa0632730:intron 40.0%
!!! CAAGTTTCAGGTTTTGTACC+AGG - chr4_3:17171991-17172010 None:intergenic 40.0%
TTGCATCGCTTACAAGTTTC+AGG - chr4_3:17172003-17172022 None:intergenic 40.0%
GAAACTTGTAAGCGATGCAA+AGG + chr4_3:17172003-17172022 Msa0632730:CDS 40.0%
GTCCAGATGTTTGTACAAAC+TGG + chr4_3:17172112-17172131 Msa0632730:intron 40.0%
AAGTACTTGTGCTACATGCA+AGG + chr4_3:17172150-17172169 Msa0632730:CDS 40.0%
AGTACTTGTGCTACATGCAA+GGG + chr4_3:17172151-17172170 Msa0632730:CDS 40.0%
! GTCAAGTTGCATACTTATCC+TGG + chr4_3:17172532-17172551 Msa0632730:CDS 40.0%
! GTAACTTGTAATGTAGGCCA+TGG + chr4_3:17172590-17172609 Msa0632730:intron 40.0%
CTCTGTATGCCATATAACCA+TGG - chr4_3:17172610-17172629 None:intergenic 40.0%
! TTGCTGTTGCTAAGTTCACT+TGG - chr4_3:17172699-17172718 None:intergenic 40.0%
TTGTTGTCTATCCCTGCAAA+TGG - chr4_3:17172922-17172941 None:intergenic 40.0%
AGACAACAATGAGACCCTAA+AGG + chr4_3:17172933-17172952 Msa0632730:CDS 40.0%
! AATGAGACCCTAAAGGTACA+TGG + chr4_3:17172940-17172959 Msa0632730:CDS 40.0%
TAGCATATAGATCACCGGAA+CGG - chr4_3:17172993-17173012 None:intergenic 40.0%
AATCCTTCTCTGCGAAAAAC+AGG - chr4_3:17173131-17173150 None:intergenic 40.0%
AGAAGGATTAGATGTTCACG+TGG + chr4_3:17173142-17173161 Msa0632730:CDS 40.0%
TGGAAGATTCTAGTAGAACC+GGG - chr4_3:17167404-17167423 None:intergenic 40.0%
! AGGTGAATTGGGGATTTTTG+GGG - chr4_3:17167479-17167498 None:intergenic 40.0%
GAGTCGCGATAAAATTACGA+AGG - chr4_3:17167955-17167974 None:intergenic 40.0%
! GGAGCGGCTAATTCATATTT+TGG + chr4_3:17168414-17168433 Msa0632730:CDS 40.0%
ACTAGATCTATTCATGGCTC+GGG + chr4_3:17168441-17168460 Msa0632730:CDS 40.0%
CAACTATGCACAAGAAAGCA+AGG - chr4_3:17168693-17168712 None:intergenic 40.0%
AGGAGCTATTACGATGTTCT+TGG + chr4_3:17168782-17168801 Msa0632730:CDS 40.0%
AAGAAAGCTTACTATGGGGT+AGG + chr4_3:17168836-17168855 Msa0632730:CDS 40.0%
CTCAACCATTTCCTATGATG+TGG + chr4_3:17169009-17169028 Msa0632730:intron 40.0%
TCATCCCACATCATAGGAAA+TGG - chr4_3:17169017-17169036 None:intergenic 40.0%
ACACTGACCTGTTATTCTGT+CGG + chr4_3:17169100-17169119 Msa0632730:intron 40.0%
AGAAAAGCCGACAGAATAAC+AGG - chr4_3:17169110-17169129 None:intergenic 40.0%
! CTTTTCTCGAATACCATAGC+TGG + chr4_3:17169123-17169142 Msa0632730:intron 40.0%
!! AGCGAGTGTTGAAAAGAGAT+TGG + chr4_3:17169544-17169563 Msa0632730:intron 40.0%
TCAAGCCCTATTACACTAAG+TGG + chr4_3:17169792-17169811 Msa0632730:intron 40.0%
CAAGCCCTATTACACTAAGT+GGG + chr4_3:17169793-17169812 Msa0632730:intron 40.0%
AAGCCCTATTACACTAAGTG+GGG + chr4_3:17169794-17169813 Msa0632730:intron 40.0%
!!! AAGGCTTGGTTTTTGGTTGT+TGG + chr4_3:17170007-17170026 Msa0632730:intron 40.0%
! CATCTTTATTTGCGTCTGGA+TGG - chr4_3:17170084-17170103 None:intergenic 40.0%
! GGATCATCTTTATTTGCGTC+TGG - chr4_3:17170088-17170107 None:intergenic 40.0%
CGCAAATAAAGATGATCCTG+AGG + chr4_3:17170090-17170109 Msa0632730:intron 40.0%
! TGAAACTTCTTTTCAGCCTC+AGG - chr4_3:17170109-17170128 None:intergenic 40.0%
GTGAAGTTTAATGCAGATGG+AGG + chr4_3:17170442-17170461 Msa0632730:intron 40.0%
! TAAGTTGTTGGCCTCTTTCA+TGG + chr4_3:17170478-17170497 Msa0632730:intron 40.0%
TGATAGAGAAAGAAAGACGG+AGG + chr4_3:17170528-17170547 Msa0632730:intron 40.0%
GATAGAGAAAGAAAGACGGA+GGG + chr4_3:17170529-17170548 Msa0632730:intron 40.0%
TCTTTCCAATGAATCCTAGG+GGG - chr4_3:17170621-17170640 None:intergenic 40.0%
TGAAAGAGGCAGTAGATACT+AGG - chr4_3:17170845-17170864 None:intergenic 40.0%
GCCTATGTAAACAACCAAAG+TGG + chr4_3:17170910-17170929 Msa0632730:CDS 40.0%
AACAACCAAAGTGGTGGTTT+CGG + chr4_3:17170919-17170938 Msa0632730:CDS 40.0%
ATGGTTGTGTAGGATTGCTT+AGG - chr4_3:17171165-17171184 None:intergenic 40.0%
GAATGTGCTGAAACTTCAGT+CGG + chr4_3:17171243-17171262 Msa0632730:intron 40.0%
GTTCCAAATCGGACAAAAGA+TGG + chr4_3:17171303-17171322 Msa0632730:intron 40.0%
CTAACACAACCCCACAAAAT+CGG - chr4_3:17171373-17171392 None:intergenic 40.0%
CAATTCCTTTCATGGTGATC+AGG + chr4_3:17171597-17171616 Msa0632730:intron 40.0%
! CTTCTCCGCCAAATTTTTGA+TGG - chr4_3:17171642-17171661 None:intergenic 40.0%
TATGAATTGTCGTCCTTCAC+TGG + chr4_3:17171864-17171883 Msa0632730:intron 40.0%
!!! CAAGTTTCAGGTTTTGTACC+AGG - chr4_3:17171991-17172010 None:intergenic 40.0%
TTGCATCGCTTACAAGTTTC+AGG - chr4_3:17172003-17172022 None:intergenic 40.0%
GAAACTTGTAAGCGATGCAA+AGG + chr4_3:17172003-17172022 Msa0632730:CDS 40.0%
GTCCAGATGTTTGTACAAAC+TGG + chr4_3:17172112-17172131 Msa0632730:intron 40.0%
AAGTACTTGTGCTACATGCA+AGG + chr4_3:17172150-17172169 Msa0632730:CDS 40.0%
AGTACTTGTGCTACATGCAA+GGG + chr4_3:17172151-17172170 Msa0632730:CDS 40.0%
! GTCAAGTTGCATACTTATCC+TGG + chr4_3:17172532-17172551 Msa0632730:CDS 40.0%
! GTAACTTGTAATGTAGGCCA+TGG + chr4_3:17172590-17172609 Msa0632730:intron 40.0%
CTCTGTATGCCATATAACCA+TGG - chr4_3:17172610-17172629 None:intergenic 40.0%
! TTGCTGTTGCTAAGTTCACT+TGG - chr4_3:17172699-17172718 None:intergenic 40.0%
TTGTTGTCTATCCCTGCAAA+TGG - chr4_3:17172922-17172941 None:intergenic 40.0%
AGACAACAATGAGACCCTAA+AGG + chr4_3:17172933-17172952 Msa0632730:CDS 40.0%
! AATGAGACCCTAAAGGTACA+TGG + chr4_3:17172940-17172959 Msa0632730:CDS 40.0%
TAGCATATAGATCACCGGAA+CGG - chr4_3:17172993-17173012 None:intergenic 40.0%
AATCCTTCTCTGCGAAAAAC+AGG - chr4_3:17173131-17173150 None:intergenic 40.0%
AGAAGGATTAGATGTTCACG+TGG + chr4_3:17173142-17173161 Msa0632730:CDS 40.0%
AAGCGAGGATGAGTTACAGT+TGG - chr4_3:17167381-17167400 None:intergenic 45.0%
!! TGGGGATTTTTGGGGATGAA+TGG - chr4_3:17167471-17167490 None:intergenic 45.0%
CCAGTAGGACGAATCATTTG+GGG - chr4_3:17167542-17167561 None:intergenic 45.0%
GCCAGTAGGACGAATCATTT+GGG - chr4_3:17167543-17167562 None:intergenic 45.0%
TGCCAGTAGGACGAATCATT+TGG - chr4_3:17167544-17167563 None:intergenic 45.0%
ACGAGTAAGGTGAGTGAAGA+GGG - chr4_3:17167570-17167589 None:intergenic 45.0%
GAAAGAGTGATCGACGAGTA+AGG - chr4_3:17167583-17167602 None:intergenic 45.0%
ACAAAAATACTCCCGGGGTT+AGG + chr4_3:17167858-17167877 Msa0632730:intron 45.0%
TTTCTTGGCTGGGACTGAAT+TGG + chr4_3:17168125-17168144 Msa0632730:intron 45.0%
TTCTTGGCTGGGACTGAATT+GGG + chr4_3:17168126-17168145 Msa0632730:intron 45.0%
TGGGCTGCTAGAAAATTGTG+AGG + chr4_3:17168145-17168164 Msa0632730:intron 45.0%
TCTAACTGCAAGTGGACAAG+GGG - chr4_3:17168361-17168380 None:intergenic 45.0%
GTCTAACTGCAAGTGGACAA+GGG - chr4_3:17168362-17168381 None:intergenic 45.0%
TGTCTAACTGCAAGTGGACA+AGG - chr4_3:17168363-17168382 None:intergenic 45.0%
TGTCCACTTGCAGTTAGACA+TGG + chr4_3:17168363-17168382 Msa0632730:intron 45.0%
ACACCATGTCTAACTGCAAG+TGG - chr4_3:17168369-17168388 None:intergenic 45.0%
GGGGCAACTAGATCTATTCA+TGG + chr4_3:17168435-17168454 Msa0632730:CDS 45.0%
! ATTTTGCAGCATCGTTGGCA+AGG + chr4_3:17168762-17168781 Msa0632730:intron 45.0%
! CGATGTTCTTGGTGTGAGTA+AGG + chr4_3:17168793-17168812 Msa0632730:CDS 45.0%
! CAGGTCTTATCCCACTAAGT+GGG + chr4_3:17169337-17169356 Msa0632730:intron 45.0%
! AGGTCTTATCCCACTAAGTG+GGG + chr4_3:17169338-17169357 Msa0632730:intron 45.0%
AAAAGCTGACCCCACTTAGT+GGG - chr4_3:17169350-17169369 None:intergenic 45.0%
TAGAACTAGGCCCCTCAAAT+TGG - chr4_3:17169471-17169490 None:intergenic 45.0%
!! GGGGCCTAGTTCTAAAATGA+TGG + chr4_3:17169477-17169496 Msa0632730:intron 45.0%
CGACCCCACTTAGTGTAATA+GGG - chr4_3:17169800-17169819 None:intergenic 45.0%
CCTATTACACTAAGTGGGGT+CGG + chr4_3:17169798-17169817 Msa0632730:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_3:17169994-17170013 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4_3:17169995-17170014 None:intergenic 45.0%
!! GTGGGATAAGGCTTGGTTTT+TGG + chr4_3:17170000-17170019 Msa0632730:intron 45.0%
GCAAGCTACAGAATATGGAG+AGG - chr4_3:17170052-17170071 None:intergenic 45.0%
TTTCCGGATCTCCATGAAAG+AGG - chr4_3:17170492-17170511 None:intergenic 45.0%
CTCTGTTTACATTTCCCCCT+AGG + chr4_3:17170604-17170623 Msa0632730:intron 45.0%
CATTTCCCCCTAGGATTCAT+TGG + chr4_3:17170613-17170632 Msa0632730:intron 45.0%
AAGTCATTACATGGCCACCA+CGG - chr4_3:17170981-17171000 None:intergenic 45.0%
TTGCTTAGGATCTGCTCGTA+TGG - chr4_3:17171151-17171170 None:intergenic 45.0%
! AGGCCATCTTTTGTCCGATT+TGG - chr4_3:17171309-17171328 None:intergenic 45.0%
! CGATTTTGTGGGGTTGTGTT+AGG + chr4_3:17171371-17171390 Msa0632730:intron 45.0%
ATTTGGCGGAGAAGATGTCA+AGG + chr4_3:17171648-17171667 Msa0632730:CDS 45.0%
TCTTTCACGGAAGCTATCCA+AGG + chr4_3:17171773-17171792 Msa0632730:CDS 45.0%
CTTTCACGGAAGCTATCCAA+GGG + chr4_3:17171774-17171793 Msa0632730:CDS 45.0%
!! ACAAAGTTTTGGTGCACCCT+TGG - chr4_3:17171793-17171812 None:intergenic 45.0%
GACGTGCTTTGTAATGCTTG+TGG + chr4_3:17171824-17171843 Msa0632730:CDS 45.0%
CACTGTTGCCGAACTATTTC+AGG + chr4_3:17171949-17171968 Msa0632730:intron 45.0%
TGTTGCCGAACTATTTCAGG+TGG + chr4_3:17171952-17171971 Msa0632730:intron 45.0%
! GTTGCCGAACTATTTCAGGT+GGG + chr4_3:17171953-17171972 Msa0632730:intron 45.0%
CACTCCCACCTGAAATAGTT+CGG - chr4_3:17171960-17171979 None:intergenic 45.0%
!!! GTTTCAGGTTTTGTACCAGG+AGG - chr4_3:17171988-17172007 None:intergenic 45.0%
ACTGAAGACTGCCACGTAAA+TGG - chr4_3:17172298-17172317 None:intergenic 45.0%
AGTTTCTGCAAGTCTTGCCA+AGG + chr4_3:17172481-17172500 Msa0632730:CDS 45.0%
CTTTGACAACTTTGGCACCT+TGG - chr4_3:17172501-17172520 None:intergenic 45.0%
! CAAGGTGCCAAAGTTGTCAA+AGG + chr4_3:17172499-17172518 Msa0632730:CDS 45.0%
! TGTGTATTCTTTGGCTCGAG+GGG - chr4_3:17172769-17172788 None:intergenic 45.0%
! GTGTGTATTCTTTGGCTCGA+GGG - chr4_3:17172770-17172789 None:intergenic 45.0%
! TGTGTGTATTCTTTGGCTCG+AGG - chr4_3:17172771-17172790 None:intergenic 45.0%
ACCACCTCCATGTACCTTTA+GGG - chr4_3:17172950-17172969 None:intergenic 45.0%
GATCCTGATTCAAACCGTTC+CGG + chr4_3:17172976-17172995 Msa0632730:CDS 45.0%
!! GATCCTGTTTTTCGCAGAGA+AGG + chr4_3:17173125-17173144 Msa0632730:CDS 45.0%
AAGCGAGGATGAGTTACAGT+TGG - chr4_3:17167381-17167400 None:intergenic 45.0%
!! TGGGGATTTTTGGGGATGAA+TGG - chr4_3:17167471-17167490 None:intergenic 45.0%
CCAGTAGGACGAATCATTTG+GGG - chr4_3:17167542-17167561 None:intergenic 45.0%
GCCAGTAGGACGAATCATTT+GGG - chr4_3:17167543-17167562 None:intergenic 45.0%
TGCCAGTAGGACGAATCATT+TGG - chr4_3:17167544-17167563 None:intergenic 45.0%
ACGAGTAAGGTGAGTGAAGA+GGG - chr4_3:17167570-17167589 None:intergenic 45.0%
GAAAGAGTGATCGACGAGTA+AGG - chr4_3:17167583-17167602 None:intergenic 45.0%
ACAAAAATACTCCCGGGGTT+AGG + chr4_3:17167858-17167877 Msa0632730:intron 45.0%
TTTCTTGGCTGGGACTGAAT+TGG + chr4_3:17168125-17168144 Msa0632730:intron 45.0%
TTCTTGGCTGGGACTGAATT+GGG + chr4_3:17168126-17168145 Msa0632730:intron 45.0%
TGGGCTGCTAGAAAATTGTG+AGG + chr4_3:17168145-17168164 Msa0632730:intron 45.0%
TCTAACTGCAAGTGGACAAG+GGG - chr4_3:17168361-17168380 None:intergenic 45.0%
GTCTAACTGCAAGTGGACAA+GGG - chr4_3:17168362-17168381 None:intergenic 45.0%
TGTCTAACTGCAAGTGGACA+AGG - chr4_3:17168363-17168382 None:intergenic 45.0%
TGTCCACTTGCAGTTAGACA+TGG + chr4_3:17168363-17168382 Msa0632730:intron 45.0%
ACACCATGTCTAACTGCAAG+TGG - chr4_3:17168369-17168388 None:intergenic 45.0%
GGGGCAACTAGATCTATTCA+TGG + chr4_3:17168435-17168454 Msa0632730:CDS 45.0%
! ATTTTGCAGCATCGTTGGCA+AGG + chr4_3:17168762-17168781 Msa0632730:intron 45.0%
! CGATGTTCTTGGTGTGAGTA+AGG + chr4_3:17168793-17168812 Msa0632730:CDS 45.0%
! CAGGTCTTATCCCACTAAGT+GGG + chr4_3:17169337-17169356 Msa0632730:intron 45.0%
! AGGTCTTATCCCACTAAGTG+GGG + chr4_3:17169338-17169357 Msa0632730:intron 45.0%
AAAAGCTGACCCCACTTAGT+GGG - chr4_3:17169350-17169369 None:intergenic 45.0%
TAGAACTAGGCCCCTCAAAT+TGG - chr4_3:17169471-17169490 None:intergenic 45.0%
!! GGGGCCTAGTTCTAAAATGA+TGG + chr4_3:17169477-17169496 Msa0632730:intron 45.0%
CGACCCCACTTAGTGTAATA+GGG - chr4_3:17169800-17169819 None:intergenic 45.0%
CCTATTACACTAAGTGGGGT+CGG + chr4_3:17169798-17169817 Msa0632730:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_3:17169994-17170013 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4_3:17169995-17170014 None:intergenic 45.0%
!! GTGGGATAAGGCTTGGTTTT+TGG + chr4_3:17170000-17170019 Msa0632730:intron 45.0%
GCAAGCTACAGAATATGGAG+AGG - chr4_3:17170052-17170071 None:intergenic 45.0%
TTTCCGGATCTCCATGAAAG+AGG - chr4_3:17170492-17170511 None:intergenic 45.0%
CTCTGTTTACATTTCCCCCT+AGG + chr4_3:17170604-17170623 Msa0632730:intron 45.0%
CATTTCCCCCTAGGATTCAT+TGG + chr4_3:17170613-17170632 Msa0632730:intron 45.0%
AAGTCATTACATGGCCACCA+CGG - chr4_3:17170981-17171000 None:intergenic 45.0%
TTGCTTAGGATCTGCTCGTA+TGG - chr4_3:17171151-17171170 None:intergenic 45.0%
! AGGCCATCTTTTGTCCGATT+TGG - chr4_3:17171309-17171328 None:intergenic 45.0%
! CGATTTTGTGGGGTTGTGTT+AGG + chr4_3:17171371-17171390 Msa0632730:intron 45.0%
ATTTGGCGGAGAAGATGTCA+AGG + chr4_3:17171648-17171667 Msa0632730:CDS 45.0%
TCTTTCACGGAAGCTATCCA+AGG + chr4_3:17171773-17171792 Msa0632730:CDS 45.0%
CTTTCACGGAAGCTATCCAA+GGG + chr4_3:17171774-17171793 Msa0632730:CDS 45.0%
!! ACAAAGTTTTGGTGCACCCT+TGG - chr4_3:17171793-17171812 None:intergenic 45.0%
GACGTGCTTTGTAATGCTTG+TGG + chr4_3:17171824-17171843 Msa0632730:CDS 45.0%
CACTGTTGCCGAACTATTTC+AGG + chr4_3:17171949-17171968 Msa0632730:intron 45.0%
TGTTGCCGAACTATTTCAGG+TGG + chr4_3:17171952-17171971 Msa0632730:intron 45.0%
! GTTGCCGAACTATTTCAGGT+GGG + chr4_3:17171953-17171972 Msa0632730:intron 45.0%
CACTCCCACCTGAAATAGTT+CGG - chr4_3:17171960-17171979 None:intergenic 45.0%
!!! GTTTCAGGTTTTGTACCAGG+AGG - chr4_3:17171988-17172007 None:intergenic 45.0%
ACTGAAGACTGCCACGTAAA+TGG - chr4_3:17172298-17172317 None:intergenic 45.0%
AGTTTCTGCAAGTCTTGCCA+AGG + chr4_3:17172481-17172500 Msa0632730:CDS 45.0%
CTTTGACAACTTTGGCACCT+TGG - chr4_3:17172501-17172520 None:intergenic 45.0%
! CAAGGTGCCAAAGTTGTCAA+AGG + chr4_3:17172499-17172518 Msa0632730:CDS 45.0%
! TGTGTATTCTTTGGCTCGAG+GGG - chr4_3:17172769-17172788 None:intergenic 45.0%
! GTGTGTATTCTTTGGCTCGA+GGG - chr4_3:17172770-17172789 None:intergenic 45.0%
! TGTGTGTATTCTTTGGCTCG+AGG - chr4_3:17172771-17172790 None:intergenic 45.0%
ACCACCTCCATGTACCTTTA+GGG - chr4_3:17172950-17172969 None:intergenic 45.0%
GATCCTGATTCAAACCGTTC+CGG + chr4_3:17172976-17172995 Msa0632730:CDS 45.0%
!! GATCCTGTTTTTCGCAGAGA+AGG + chr4_3:17173125-17173144 Msa0632730:CDS 45.0%
!!! TTTGATTTAAAATTTAAATT+AGG + chr4_3:17169270-17169289 Msa0632730:intron 5.0%
!! AATTTATTTACAAAAATTAA+GGG - chr4_3:17172335-17172354 None:intergenic 5.0%
!!! TTTGATTTAAAATTTAAATT+AGG + chr4_3:17169270-17169289 Msa0632730:intron 5.0%
!! AATTTATTTACAAAAATTAA+GGG - chr4_3:17172335-17172354 None:intergenic 5.0%
TGTAACTCATCCTCGCTTCC+CGG + chr4_3:17167383-17167402 Msa0632730:five_prime_UTR 50.0%
CCCCAAATGATTCGTCCTAC+TGG + chr4_3:17167539-17167558 Msa0632730:exon 50.0%
GACGAGTAAGGTGAGTGAAG+AGG - chr4_3:17167571-17167590 None:intergenic 50.0%
TGAGGCACAAATCCGACACA+GGG - chr4_3:17167889-17167908 None:intergenic 50.0%
ATGAGGCACAAATCCGACAC+AGG - chr4_3:17167890-17167909 None:intergenic 50.0%
! GAACTGGTTGCTATTGGGAG+CGG + chr4_3:17168398-17168417 Msa0632730:CDS 50.0%
GGATAGTAGATGTAGGCACG+TGG + chr4_3:17168634-17168653 Msa0632730:intron 50.0%
CCTCTCTCATCCCACATCAT+AGG - chr4_3:17169023-17169042 None:intergenic 50.0%
CCTATGATGTGGGATGAGAG+AGG + chr4_3:17169020-17169039 Msa0632730:intron 50.0%
CCACTTAGTGGGATAAGACC+TGG - chr4_3:17169339-17169358 None:intergenic 50.0%
! CCAGGTCTTATCCCACTAAG+TGG + chr4_3:17169336-17169355 Msa0632730:intron 50.0%
CAAAAGCTGACCCCACTTAG+TGG - chr4_3:17169351-17169370 None:intergenic 50.0%
ACATGGGTCCCACCAATTTG+AGG + chr4_3:17169456-17169475 Msa0632730:intron 50.0%
CATGGGTCCCACCAATTTGA+GGG + chr4_3:17169457-17169476 Msa0632730:intron 50.0%
ATGGGTCCCACCAATTTGAG+GGG + chr4_3:17169458-17169477 Msa0632730:intron 50.0%
ACTAGGCCCCTCAAATTGGT+GGG - chr4_3:17169467-17169486 None:intergenic 50.0%
AACTAGGCCCCTCAAATTGG+TGG - chr4_3:17169468-17169487 None:intergenic 50.0%
CCGACCCCACTTAGTGTAAT+AGG - chr4_3:17169801-17169820 None:intergenic 50.0%
TTATTGCCGACCCCACTTAG+TGG + chr4_3:17169981-17170000 Msa0632730:intron 50.0%
TATTGCCGACCCCACTTAGT+GGG + chr4_3:17169982-17170001 Msa0632730:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_3:17169342-17169361 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_3:17169996-17170015 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_3:17169993-17170012 Msa0632730:intron 50.0%
TGGCCTCTTTCATGGAGATC+CGG + chr4_3:17170486-17170505 Msa0632730:intron 50.0%
AACCAAAGTGGTGGTTTCGG+AGG + chr4_3:17170922-17170941 Msa0632730:CDS 50.0%
!! ACCCTACGAGCCGATTTTGT+GGG + chr4_3:17171360-17171379 Msa0632730:intron 50.0%
! CGAACTATTTCAGGTGGGAG+TGG + chr4_3:17171958-17171977 Msa0632730:intron 50.0%
TGTAAGCGATGCAAAGGGTC+AGG + chr4_3:17172009-17172028 Msa0632730:CDS 50.0%
AGGAGTGGTCAGTATCGTGT+TGG + chr4_3:17172029-17172048 Msa0632730:intron 50.0%
TGTGCTACATGCAAGGGAAC+TGG + chr4_3:17172157-17172176 Msa0632730:CDS 50.0%
! GTGTATTCTTTGGCTCGAGG+GGG - chr4_3:17172768-17172787 None:intergenic 50.0%
! GAGACCCTAAAGGTACATGG+AGG + chr4_3:17172943-17172962 Msa0632730:CDS 50.0%
! ACCCTAAAGGTACATGGAGG+TGG + chr4_3:17172946-17172965 Msa0632730:CDS 50.0%
CACCACCTCCATGTACCTTT+AGG - chr4_3:17172951-17172970 None:intergenic 50.0%
! CTAAAGGTACATGGAGGTGG+TGG + chr4_3:17172949-17172968 Msa0632730:CDS 50.0%
TCACCGGAACGGTTTGAATC+AGG - chr4_3:17172982-17173001 None:intergenic 50.0%
TGTAACTCATCCTCGCTTCC+CGG + chr4_3:17167383-17167402 Msa0632730:five_prime_UTR 50.0%
CCCCAAATGATTCGTCCTAC+TGG + chr4_3:17167539-17167558 Msa0632730:exon 50.0%
GACGAGTAAGGTGAGTGAAG+AGG - chr4_3:17167571-17167590 None:intergenic 50.0%
TGAGGCACAAATCCGACACA+GGG - chr4_3:17167889-17167908 None:intergenic 50.0%
ATGAGGCACAAATCCGACAC+AGG - chr4_3:17167890-17167909 None:intergenic 50.0%
! GAACTGGTTGCTATTGGGAG+CGG + chr4_3:17168398-17168417 Msa0632730:CDS 50.0%
GGATAGTAGATGTAGGCACG+TGG + chr4_3:17168634-17168653 Msa0632730:intron 50.0%
CCTCTCTCATCCCACATCAT+AGG - chr4_3:17169023-17169042 None:intergenic 50.0%
CCTATGATGTGGGATGAGAG+AGG + chr4_3:17169020-17169039 Msa0632730:intron 50.0%
CCACTTAGTGGGATAAGACC+TGG - chr4_3:17169339-17169358 None:intergenic 50.0%
! CCAGGTCTTATCCCACTAAG+TGG + chr4_3:17169336-17169355 Msa0632730:intron 50.0%
CAAAAGCTGACCCCACTTAG+TGG - chr4_3:17169351-17169370 None:intergenic 50.0%
ACATGGGTCCCACCAATTTG+AGG + chr4_3:17169456-17169475 Msa0632730:intron 50.0%
CATGGGTCCCACCAATTTGA+GGG + chr4_3:17169457-17169476 Msa0632730:intron 50.0%
ATGGGTCCCACCAATTTGAG+GGG + chr4_3:17169458-17169477 Msa0632730:intron 50.0%
ACTAGGCCCCTCAAATTGGT+GGG - chr4_3:17169467-17169486 None:intergenic 50.0%
AACTAGGCCCCTCAAATTGG+TGG - chr4_3:17169468-17169487 None:intergenic 50.0%
CCGACCCCACTTAGTGTAAT+AGG - chr4_3:17169801-17169820 None:intergenic 50.0%
TTATTGCCGACCCCACTTAG+TGG + chr4_3:17169981-17170000 Msa0632730:intron 50.0%
TATTGCCGACCCCACTTAGT+GGG + chr4_3:17169982-17170001 Msa0632730:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_3:17169342-17169361 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_3:17169996-17170015 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_3:17169993-17170012 Msa0632730:intron 50.0%
TGGCCTCTTTCATGGAGATC+CGG + chr4_3:17170486-17170505 Msa0632730:intron 50.0%
AACCAAAGTGGTGGTTTCGG+AGG + chr4_3:17170922-17170941 Msa0632730:CDS 50.0%
!! ACCCTACGAGCCGATTTTGT+GGG + chr4_3:17171360-17171379 Msa0632730:intron 50.0%
! CGAACTATTTCAGGTGGGAG+TGG + chr4_3:17171958-17171977 Msa0632730:intron 50.0%
TGTAAGCGATGCAAAGGGTC+AGG + chr4_3:17172009-17172028 Msa0632730:CDS 50.0%
AGGAGTGGTCAGTATCGTGT+TGG + chr4_3:17172029-17172048 Msa0632730:intron 50.0%
TGTGCTACATGCAAGGGAAC+TGG + chr4_3:17172157-17172176 Msa0632730:CDS 50.0%
! GTGTATTCTTTGGCTCGAGG+GGG - chr4_3:17172768-17172787 None:intergenic 50.0%
! GAGACCCTAAAGGTACATGG+AGG + chr4_3:17172943-17172962 Msa0632730:CDS 50.0%
! ACCCTAAAGGTACATGGAGG+TGG + chr4_3:17172946-17172965 Msa0632730:CDS 50.0%
CACCACCTCCATGTACCTTT+AGG - chr4_3:17172951-17172970 None:intergenic 50.0%
! CTAAAGGTACATGGAGGTGG+TGG + chr4_3:17172949-17172968 Msa0632730:CDS 50.0%
TCACCGGAACGGTTTGAATC+AGG - chr4_3:17172982-17173001 None:intergenic 50.0%
TCTAGTAGAACCGGGAAGCG+AGG - chr4_3:17167396-17167415 None:intergenic 55.0%
GTGAAGAGGGTGATGCCAGT+AGG - chr4_3:17167557-17167576 None:intergenic 55.0%
GGTTAGGCGTATCCCTGTGT+CGG + chr4_3:17167874-17167893 Msa0632730:intron 55.0%
AACTGCAAGTGGACAAGGGG+AGG - chr4_3:17168358-17168377 None:intergenic 55.0%
! ACCATAGCTGGCCTCCATCA+TGG + chr4_3:17169135-17169154 Msa0632730:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_3:17169988-17170007 Msa0632730:intron 55.0%
TGCCTCCGAAACCACCACTT+TGG - chr4_3:17170927-17170946 None:intergenic 55.0%
AGTGGTGGTTTCGGAGGCAA+TGG + chr4_3:17170928-17170947 Msa0632730:CDS 55.0%
CCACGGAACATCTGCTCGAA+AGG - chr4_3:17170964-17170983 None:intergenic 55.0%
CCTTTCGAGCAGATGTTCCG+TGG + chr4_3:17170961-17170980 Msa0632730:CDS 55.0%
TTCGAGCAGATGTTCCGTGG+TGG + chr4_3:17170964-17170983 Msa0632730:CDS 55.0%
!! CAAAATCGGCTCGTAGGGTG+AGG - chr4_3:17171359-17171378 None:intergenic 55.0%
!! CACCCTACGAGCCGATTTTG+TGG + chr4_3:17171359-17171378 Msa0632730:intron 55.0%
!! CCCCACAAAATCGGCTCGTA+GGG - chr4_3:17171364-17171383 None:intergenic 55.0%
!! CCCTACGAGCCGATTTTGTG+GGG + chr4_3:17171361-17171380 Msa0632730:intron 55.0%
!! ACCCCACAAAATCGGCTCGT+AGG - chr4_3:17171365-17171384 None:intergenic 55.0%
TCTAGTAGAACCGGGAAGCG+AGG - chr4_3:17167396-17167415 None:intergenic 55.0%
GTGAAGAGGGTGATGCCAGT+AGG - chr4_3:17167557-17167576 None:intergenic 55.0%
GGTTAGGCGTATCCCTGTGT+CGG + chr4_3:17167874-17167893 Msa0632730:intron 55.0%
AACTGCAAGTGGACAAGGGG+AGG - chr4_3:17168358-17168377 None:intergenic 55.0%
! ACCATAGCTGGCCTCCATCA+TGG + chr4_3:17169135-17169154 Msa0632730:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_3:17169988-17170007 Msa0632730:intron 55.0%
TGCCTCCGAAACCACCACTT+TGG - chr4_3:17170927-17170946 None:intergenic 55.0%
AGTGGTGGTTTCGGAGGCAA+TGG + chr4_3:17170928-17170947 Msa0632730:CDS 55.0%
CCACGGAACATCTGCTCGAA+AGG - chr4_3:17170964-17170983 None:intergenic 55.0%
CCTTTCGAGCAGATGTTCCG+TGG + chr4_3:17170961-17170980 Msa0632730:CDS 55.0%
TTCGAGCAGATGTTCCGTGG+TGG + chr4_3:17170964-17170983 Msa0632730:CDS 55.0%
!! CAAAATCGGCTCGTAGGGTG+AGG - chr4_3:17171359-17171378 None:intergenic 55.0%
!! CACCCTACGAGCCGATTTTG+TGG + chr4_3:17171359-17171378 Msa0632730:intron 55.0%
!! CCCCACAAAATCGGCTCGTA+GGG - chr4_3:17171364-17171383 None:intergenic 55.0%
!! CCCTACGAGCCGATTTTGTG+GGG + chr4_3:17171361-17171380 Msa0632730:intron 55.0%
!! ACCCCACAAAATCGGCTCGT+AGG - chr4_3:17171365-17171384 None:intergenic 55.0%
ACAGGGATACGCCTAACCCC+GGG - chr4_3:17167872-17167891 None:intergenic 60.0%
CACAGGGATACGCCTAACCC+CGG - chr4_3:17167873-17167892 None:intergenic 60.0%
TGCAAGTGGACAAGGGGAGG+AGG - chr4_3:17168355-17168374 None:intergenic 60.0%
! GCCATGATGGAGGCCAGCTA+TGG - chr4_3:17169139-17169158 None:intergenic 60.0%
GGTGGTTTCGGAGGCAATGG+TGG + chr4_3:17170931-17170950 Msa0632730:CDS 60.0%
GCGATGCAAAGGGTCAGGAG+TGG + chr4_3:17172014-17172033 Msa0632730:CDS 60.0%
ACAGGGATACGCCTAACCCC+GGG - chr4_3:17167872-17167891 None:intergenic 60.0%
CACAGGGATACGCCTAACCC+CGG - chr4_3:17167873-17167892 None:intergenic 60.0%
TGCAAGTGGACAAGGGGAGG+AGG - chr4_3:17168355-17168374 None:intergenic 60.0%
! GCCATGATGGAGGCCAGCTA+TGG - chr4_3:17169139-17169158 None:intergenic 60.0%
GGTGGTTTCGGAGGCAATGG+TGG + chr4_3:17170931-17170950 Msa0632730:CDS 60.0%
GCGATGCAAAGGGTCAGGAG+TGG + chr4_3:17172014-17172033 Msa0632730:CDS 60.0%
GGTGGGAGTGGTCTTCCTCC+TGG + chr4_3:17171970-17171989 Msa0632730:intron 65.0%
GGTGGGAGTGGTCTTCCTCC+TGG + chr4_3:17171970-17171989 Msa0632730:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 17167360 17173318 17167360 ID=Msa0632730;Name=Msa0632730
chr4_3 mRNA 17167360 17173318 17167360 ID=Msa0632730-mRNA-1;Parent=Msa0632730;Name=Msa0632730-mRNA-1;_AED=0.09;_eAED=0.09;_QI=185|0.92|0.85|1|1|1|14|32|374
chr4_3 exon 17167360 17167616 17167360 ID=Msa0632730-mRNA-1:exon:4779;Parent=Msa0632730-mRNA-1
chr4_3 exon 17167717 17167798 17167717 ID=Msa0632730-mRNA-1:exon:4780;Parent=Msa0632730-mRNA-1
chr4_3 exon 17168376 17168462 17168376 ID=Msa0632730-mRNA-1:exon:4781;Parent=Msa0632730-mRNA-1
chr4_3 exon 17168771 17168857 17168771 ID=Msa0632730-mRNA-1:exon:4782;Parent=Msa0632730-mRNA-1
chr4_3 exon 17170101 17170150 17170101 ID=Msa0632730-mRNA-1:exon:4783;Parent=Msa0632730-mRNA-1
chr4_3 exon 17170257 17170295 17170257 ID=Msa0632730-mRNA-1:exon:4784;Parent=Msa0632730-mRNA-1
chr4_3 exon 17170898 17170990 17170898 ID=Msa0632730-mRNA-1:exon:4785;Parent=Msa0632730-mRNA-1
chr4_3 exon 17171619 17171669 17171619 ID=Msa0632730-mRNA-1:exon:4786;Parent=Msa0632730-mRNA-1
chr4_3 exon 17171758 17171845 17171758 ID=Msa0632730-mRNA-1:exon:4787;Parent=Msa0632730-mRNA-1
chr4_3 exon 17171971 17172035 17171971 ID=Msa0632730-mRNA-1:exon:4788;Parent=Msa0632730-mRNA-1
chr4_3 exon 17172118 17172192 17172118 ID=Msa0632730-mRNA-1:exon:4789;Parent=Msa0632730-mRNA-1
chr4_3 exon 17172481 17172553 17172481 ID=Msa0632730-mRNA-1:exon:4790;Parent=Msa0632730-mRNA-1
chr4_3 exon 17172929 17173020 17172929 ID=Msa0632730-mRNA-1:exon:4791;Parent=Msa0632730-mRNA-1
chr4_3 exon 17173116 17173318 17173116 ID=Msa0632730-mRNA-1:exon:4792;Parent=Msa0632730-mRNA-1
chr4_3 five_prime_UTR 17167360 17167544 17167360 ID=Msa0632730-mRNA-1:five_prime_utr;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17167545 17167616 17167545 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17167717 17167798 17167717 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17168376 17168462 17168376 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17168771 17168857 17168771 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17170101 17170150 17170101 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17170257 17170295 17170257 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17170898 17170990 17170898 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17171619 17171669 17171619 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17171758 17171845 17171758 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17171971 17172035 17171971 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17172118 17172192 17172118 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17172481 17172553 17172481 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17172929 17173020 17172929 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 CDS 17173116 17173286 17173116 ID=Msa0632730-mRNA-1:cds;Parent=Msa0632730-mRNA-1
chr4_3 three_prime_UTR 17173287 17173318 17173287 ID=Msa0632730-mRNA-1:three_prime_utr;Parent=Msa0632730-mRNA-1
Gene Sequence

>Msa0632730

ATGATTCGTCCTACTGGCATCACCCTCTTCACTCACCTTACTCGTCGATCACTCTTTCGCGCCAATCATTCCGTATATCAAGTAGTGTTTCAAAGGGGTTATAGGACATTGAATCCATCATCTACTGTTATTGGTAGTAGTTATGCAACAAATGTTAGACATGGTGTTCATTTGAAGAACTGGTTGCTATTGGGAGCGGCTAATTCATATTTTGGGGCAACTAGATCTATTCATGGCTCGGCATCGTTGGCAAGGAGCTATTACGATGTTCTTGGTGTGAGTAAGGATGCAAGCTCTTCCGAAATAAAGAAAGCTTACTATGGGGTAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTACATTGGCATATGAGGTTTTGAAGGATGGGGAAAAACGTCAACAGTATGATCAGGTTGGACATGATGCCTATGTAAACAACCAAAGTGGTGGTTTCGGAGGCAATGGTGGCTTTAATCCTTTCGAGCAGATGTTCCGTGGTGGCCATGATATTTTCAGCAGCTTTTTCCATCAAAAATTTGGCGGAGAAGATGTCAAGACTGTGGTTGAACTATCTTTCACGGAAGCTATCCAAGGGTGCACCAAAACTTTGTCATTTCAAACAGACGTGCTTTGTAATGCTTGTGGTGGGAGTGGTCTTCCTCCTGGTACAAAACCTGAAACTTGTAAGCGATGCAAAGGGTCAGGAGTGATGTTTGTACAAACTGGAATATTCAGAATGGAAAGTACTTGTGCTACATGCAAGGGAACTGGAAAAATTGTATCGAGTTTCTGCAAGTCTTGCCAAGGTGCCAAAGTTGTCAAAGGAACAAAGTCAGTCAAGTTGCATACTTATCCTGGGATAGACAACAATGAGACCCTAAAGGTACATGGAGGTGGTGGAGCAGATCCTGATTCAAACCGTTCCGGTGATCTATATGCTACTATCAAGGTTAGGGAAGATCCTGTTTTTCGCAGAGAAGGATTAGATGTTCACGTGGATGCTGTTTTAAGTTTCACTCAGGTAATGTTTCATGAAGAAAATGTTGAGCAACGATTTTACTTGGTTTTCTGGTTGTGTATTTTTTTTCAGACCATGTGTGTATTTAATTTTAGTCATTAA

Protein sequence

>Msa0632730

MIRPTGITLFTHLTRRSLFRANHSVYQVVFQRGYRTLNPSSTVIGSSYATNVRHGVHLKNWLLLGAANSYFGATRSIHGSASLARSYYDVLGVSKDASSSEIKKAYYGVDDPEAEKKFQEVTLAYEVLKDGEKRQQYDQVGHDAYVNNQSGGFGGNGGFNPFEQMFRGGHDIFSSFFHQKFGGEDVKTVVELSFTEAIQGCTKTLSFQTDVLCNACGGSGLPPGTKPETCKRCKGSGVMFVQTGIFRMESTCATCKGTGKIVSSFCKSCQGAKVVKGTKSVKLHTYPGIDNNETLKVHGGGGADPDSNRSGDLYATIKVREDPVFRREGLDVHVDAVLSFTQVMFHEENVEQRFYLVFWLCIFFQTMCVFNFSH*