Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697040 | XP_024636751.1 | 95.588 | 68 | 3 | 0 | 1 | 68 | 1 | 68 | 3.93e-39 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697040 | G7JV31 | 95.588 | 68 | 3 | 0 | 1 | 68 | 1 | 68 | 1.88e-39 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0697040 | 0.816894 | 4.370857e-52 | -8.615850e-47 |
| Msa0006110 | Msa0697040 | 0.857026 | 2.159886e-62 | -8.615850e-47 |
| Msa0011170 | Msa0697040 | 0.813945 | 1.979668e-51 | -8.615850e-47 |
| Msa0014710 | Msa0697040 | 0.811703 | 6.131689e-51 | -8.615850e-47 |
| Msa0026450 | Msa0697040 | 0.808952 | 2.404523e-50 | -8.615850e-47 |
| Msa0036140 | Msa0697040 | 0.806620 | 7.528886e-50 | -8.615850e-47 |
| Msa0036920 | Msa0697040 | 0.808335 | 3.257843e-50 | -8.615850e-47 |
| Msa0042550 | Msa0697040 | 0.802627 | 5.128246e-49 | -8.615850e-47 |
| Msa0045790 | Msa0697040 | 0.806929 | 6.477412e-50 | -8.615850e-47 |
| Msa0046160 | Msa0697040 | 0.808563 | 2.912557e-50 | -8.615850e-47 |
| Msa0054480 | Msa0697040 | 0.813022 | 3.158944e-51 | -8.615850e-47 |
| Msa0068740 | Msa0697040 | -0.818810 | 1.613882e-52 | -8.615850e-47 |
| Msa0075880 | Msa0697040 | 0.815923 | 7.209013e-52 | -8.615850e-47 |
| Msa0084380 | Msa0697040 | 0.810921 | 9.061106e-51 | -8.615850e-47 |
| Msa0095560 | Msa0697040 | 0.814664 | 1.372794e-51 | -8.615850e-47 |
| Msa0104800 | Msa0697040 | 0.810234 | 1.275644e-50 | -8.615850e-47 |
| Msa0105070 | Msa0697040 | 0.818212 | 2.205013e-52 | -8.615850e-47 |
| Msa0114060 | Msa0697040 | 0.800952 | 1.132192e-48 | -8.615850e-47 |
| Msa0613120 | Msa0697040 | 0.820253 | 7.562199e-53 | -8.615850e-47 |
| Msa0613440 | Msa0697040 | 0.835276 | 1.844119e-56 | -8.615850e-47 |
| Msa0613460 | Msa0697040 | 0.816161 | 6.377329e-52 | -8.615850e-47 |
| Msa0615010 | Msa0697040 | 0.802373 | 5.785836e-49 | -8.615850e-47 |
| Msa0625720 | Msa0697040 | 0.817777 | 2.765641e-52 | -8.615850e-47 |
| Msa0626360 | Msa0697040 | 0.808144 | 3.578044e-50 | -8.615850e-47 |
| Msa0632730 | Msa0697040 | 0.803855 | 2.855894e-49 | -8.615850e-47 |
| Msa0637900 | Msa0697040 | 0.801694 | 7.979756e-49 | -8.615850e-47 |
| Msa0652940 | Msa0697040 | 0.805716 | 1.166988e-49 | -8.615850e-47 |
| Msa0653660 | Msa0697040 | 0.823832 | 1.119851e-53 | -8.615850e-47 |
| Msa0661650 | Msa0697040 | 0.812372 | 4.383212e-51 | -8.615850e-47 |
| Msa0663390 | Msa0697040 | 0.812490 | 4.130625e-51 | -8.615850e-47 |
| Msa0673460 | Msa0697040 | 0.820622 | 6.222421e-53 | -8.615850e-47 |
| Msa0679290 | Msa0697040 | -0.821731 | 3.455341e-53 | -8.615850e-47 |
| Msa0685750 | Msa0697040 | 0.813438 | 2.560208e-51 | -8.615850e-47 |
| Msa0688070 | Msa0697040 | 0.812454 | 4.206286e-51 | -8.615850e-47 |
| Msa0693380 | Msa0697040 | 0.830106 | 3.540167e-55 | -8.615850e-47 |
| Msa0694370 | Msa0697040 | 0.801119 | 1.046692e-48 | -8.615850e-47 |
| Msa0696080 | Msa0697040 | 0.816936 | 4.275872e-52 | -8.615850e-47 |
| Msa0696390 | Msa0697040 | 0.814924 | 1.202477e-51 | -8.615850e-47 |
| Msa0697030 | Msa0697040 | 0.851902 | 6.558235e-61 | -8.615850e-47 |
| Msa0697040 | Msa0697050 | 0.884192 | 2.365091e-71 | -8.615850e-47 |
| Msa0697040 | Msa0703780 | 0.810801 | 9.621435e-51 | -8.615850e-47 |
| Msa0697040 | Msa0711790 | 0.808530 | 2.960789e-50 | -8.615850e-47 |
| Msa0697040 | Msa0716960 | 0.817095 | 3.938057e-52 | -8.615850e-47 |
| Msa0697040 | Msa0717010 | 0.817509 | 3.178925e-52 | -8.615850e-47 |
| Msa0697040 | Msa0717020 | 0.814905 | 1.214006e-51 | -8.615850e-47 |
| Msa0697040 | Msa0724210 | 0.813681 | 2.262912e-51 | -8.615850e-47 |
| Msa0697040 | Msa0731940 | 0.831257 | 1.849460e-55 | -8.615850e-47 |
| Msa0697040 | Msa0735170 | 0.809220 | 2.106793e-50 | -8.615850e-47 |
| Msa0697040 | Msa0740510 | 0.814847 | 1.250475e-51 | -8.615850e-47 |
| Msa0697040 | Msa0749440 | 0.806785 | 6.948694e-50 | -8.615850e-47 |
| Msa0697040 | Msa0750240 | 0.800451 | 1.432755e-48 | -8.615850e-47 |
| Msa0697040 | Msa0751850 | 0.812338 | 4.458880e-51 | -8.615850e-47 |
| Msa0697040 | Msa0753720 | 0.829999 | 3.759439e-55 | -8.615850e-47 |
| Msa0697040 | Msa0760130 | 0.838362 | 3.009014e-57 | -8.615850e-47 |
| Msa0697040 | Msa0762360 | 0.803143 | 4.013344e-49 | -8.615850e-47 |
| Msa0697040 | Msa0762970 | 0.816539 | 5.249697e-52 | -8.615850e-47 |
| Msa0697040 | Msa0763890 | 0.811254 | 7.674408e-51 | -8.615850e-47 |
| Msa0697040 | Msa0763920 | 0.804197 | 2.424912e-49 | -8.615850e-47 |
| Msa0697040 | Msa0766630 | 0.826631 | 2.440087e-54 | -8.615850e-47 |
| Msa0697040 | Msa0797250 | 0.800199 | 1.611781e-48 | -8.615850e-47 |
| Msa0697040 | Msa0802830 | 0.810219 | 1.284912e-50 | -8.615850e-47 |
| Msa0697040 | Msa0807030 | 0.802181 | 6.337401e-49 | -8.615850e-47 |
| Msa0697040 | Msa0808100 | 0.805347 | 1.394544e-49 | -8.615850e-47 |
| Msa0697040 | Msa0810220 | 0.821516 | 3.873551e-53 | -8.615850e-47 |
| Msa0697040 | Msa0817460 | 0.836869 | 7.266177e-57 | -8.615850e-47 |
| Msa0697040 | Msa0820770 | 0.812800 | 3.532630e-51 | -8.615850e-47 |
| Msa0697040 | Msa0820850 | 0.850290 | 1.868454e-60 | -8.615850e-47 |
| Msa0697040 | Msa0830230 | 0.808056 | 3.735332e-50 | -8.615850e-47 |
| Msa0697040 | Msa0830510 | 0.818933 | 1.513492e-52 | -8.615850e-47 |
| Msa0697040 | Msa0831850 | 0.815537 | 8.789368e-52 | -8.615850e-47 |
| Msa0697040 | Msa0832340 | 0.824316 | 8.621996e-54 | -8.615850e-47 |
| Msa0697040 | Msa0835800 | 0.817022 | 4.090543e-52 | -8.615850e-47 |
| Msa0697040 | Msa0842650 | 0.822842 | 1.908025e-53 | -8.615850e-47 |
| Msa0697040 | Msa0844490 | 0.817506 | 3.184114e-52 | -8.615850e-47 |
| Msa0697040 | Msa0849030 | 0.808804 | 2.586792e-50 | -8.615850e-47 |
| Msa0697040 | Msa0858130 | 0.803193 | 3.917303e-49 | -8.615850e-47 |
| Msa0697040 | Msa0861090 | 0.810225 | 1.281403e-50 | -8.615850e-47 |
| Msa0697040 | Msa0861130 | 0.854479 | 1.197568e-61 | -8.615850e-47 |
| Msa0697040 | Msa0870530 | 0.807361 | 5.248480e-50 | -8.615850e-47 |
| Msa0697040 | Msa0880950 | 0.804849 | 1.773177e-49 | -8.615850e-47 |
| Msa0697040 | Msa0892080 | 0.831742 | 1.404628e-55 | -8.615850e-47 |
| Msa0697040 | Msa0898750 | 0.807608 | 4.650693e-50 | -8.615850e-47 |
| Msa0697040 | Msa0901400 | 0.832203 | 1.080551e-55 | -8.615850e-47 |
| Msa0697040 | Msa0902830 | 0.800737 | 1.252706e-48 | -8.615850e-47 |
| Msa0697040 | Msa0926470 | 0.802356 | 5.832673e-49 | -8.615850e-47 |
| Msa0697040 | Msa0926890 | 0.823207 | 1.568322e-53 | -8.615850e-47 |
| Msa0697040 | Msa0927310 | 0.803351 | 3.634511e-49 | -8.615850e-47 |
| Msa0697040 | Msa0927380 | 0.822132 | 2.789694e-53 | -8.615850e-47 |
| Msa0697040 | Msa0928130 | 0.811257 | 7.662975e-51 | -8.615850e-47 |
| Msa0697040 | Msa0933100 | 0.851522 | 8.402358e-61 | -8.615850e-47 |
| Msa0697040 | Msa0936390 | 0.824252 | 8.927391e-54 | -8.615850e-47 |
| Msa0697040 | Msa0938220 | 0.808414 | 3.133652e-50 | -8.615850e-47 |
| Msa0697040 | Msa0942200 | 0.810428 | 1.158579e-50 | -8.615850e-47 |
| Msa0697040 | Msa0960390 | 0.808182 | 3.511970e-50 | -8.615850e-47 |
| Msa0697040 | Msa0960530 | 0.815881 | 7.367209e-52 | -8.615850e-47 |
| Msa0697040 | Msa0964310 | 0.803708 | 3.063948e-49 | -8.615850e-47 |
| Msa0697040 | Msa0967580 | 0.821432 | 4.050127e-53 | -8.615850e-47 |
| Msa0697040 | Msa0969450 | 0.828811 | 7.303976e-55 | -8.615850e-47 |
| Msa0697040 | Msa0969520 | 0.842803 | 2.068731e-58 | -8.615850e-47 |
| Msa0697040 | Msa0969600 | 0.806414 | 8.321814e-50 | -8.615850e-47 |
| Msa0697040 | Msa0973600 | 0.810008 | 1.427062e-50 | -8.615850e-47 |
| Msa0697040 | Msa0974070 | 0.827559 | 1.463463e-54 | -8.615850e-47 |
| Msa0697040 | Msa0974080 | 0.818796 | 1.625514e-52 | -8.615850e-47 |
| Msa0697040 | Msa0975220 | 0.804597 | 2.001373e-49 | -8.615850e-47 |
| Msa0697040 | Msa0992600 | 0.802467 | 5.534035e-49 | -8.615850e-47 |
| Msa0697040 | Msa0999870 | 0.802185 | 6.325785e-49 | -8.615850e-47 |
| Msa0697040 | Msa1003620 | 0.831983 | 1.224898e-55 | -8.615850e-47 |
| Msa0697040 | Msa1014540 | 0.835250 | 1.871863e-56 | -8.615850e-47 |
| Msa0697040 | Msa1016320 | 0.814752 | 1.312673e-51 | -8.615850e-47 |
| Msa0697040 | Msa1017350 | 0.801555 | 8.521688e-49 | -8.615850e-47 |
| Msa0697040 | Msa1019000 | 0.801168 | 1.022524e-48 | -8.615850e-47 |
| Msa0697040 | Msa1023950 | 0.829003 | 6.563790e-55 | -8.615850e-47 |
| Msa0697040 | Msa1026940 | 0.803344 | 3.645694e-49 | -8.615850e-47 |
| Msa0697040 | Msa1028590 | 0.802106 | 6.566928e-49 | -8.615850e-47 |
| Msa0697040 | Msa1030970 | 0.812123 | 4.965774e-51 | -8.615850e-47 |
| Msa0697040 | Msa1036610 | 0.812479 | 4.152239e-51 | -8.615850e-47 |
| Msa0697040 | Msa1046460 | 0.813289 | 2.760068e-51 | -8.615850e-47 |
| Msa0697040 | Msa1052330 | 0.808049 | 3.747805e-50 | -8.615850e-47 |
| Msa0697040 | Msa1061680 | 0.803950 | 2.728820e-49 | -8.615850e-47 |
| Msa0697040 | Msa1075220 | -0.816625 | 5.021230e-52 | -8.615850e-47 |
| Msa0697040 | Msa1075540 | 0.827792 | 1.286590e-54 | -8.615850e-47 |
| Msa0697040 | Msa1075650 | 0.828668 | 7.909929e-55 | -8.615850e-47 |
| Msa0697040 | Msa1082500 | 0.821074 | 4.899440e-53 | -8.615850e-47 |
| Msa0697040 | Msa1083840 | 0.802650 | 5.073657e-49 | -8.615850e-47 |
| Msa0697040 | Msa1088950 | 0.800628 | 1.318029e-48 | -8.615850e-47 |
| Msa0697040 | Msa1121480 | 0.827994 | 1.150009e-54 | -8.615850e-47 |
| Msa0697040 | Msa1121490 | 0.838070 | 3.577355e-57 | -8.615850e-47 |
| Msa0697040 | Msa1137570 | 0.826039 | 3.375617e-54 | -8.615850e-47 |
| Msa0697040 | Msa1139000 | -0.801005 | 1.104401e-48 | -8.615850e-47 |
| Msa0697040 | Msa1143020 | 0.801082 | 1.064942e-48 | -8.615850e-47 |
| Msa0697040 | Msa1144720 | -0.807477 | 4.959343e-50 | -8.615850e-47 |
| Msa0697040 | Msa1144750 | 0.804293 | 2.315462e-49 | -8.615850e-47 |
| Msa0697040 | Msa1147740 | 0.821175 | 4.641858e-53 | -8.615850e-47 |
| Msa0697040 | Msa1154280 | 0.818188 | 2.233070e-52 | -8.615850e-47 |
| Msa0697040 | Msa1158310 | 0.802483 | 5.492572e-49 | -8.615850e-47 |
| Msa0697040 | Msa1162550 | -0.824699 | 7.006898e-54 | -8.615850e-47 |
| Msa0697040 | Msa1162780 | 0.840286 | 9.528253e-58 | -8.615850e-47 |
| Msa0697040 | Msa1163090 | 0.805785 | 1.128579e-49 | -8.615850e-47 |
| Msa0697040 | Msa1174040 | 0.815611 | 8.459013e-52 | -8.615850e-47 |
| Msa0697040 | Msa1195190 | 0.800817 | 1.205989e-48 | -8.615850e-47 |
| Msa0697040 | Msa1209530 | 0.806980 | 6.319882e-50 | -8.615850e-47 |
| Msa0697040 | Msa1210020 | 0.810742 | 9.910741e-51 | -8.615850e-47 |
| Msa0697040 | Msa1211140 | -0.802205 | 6.264667e-49 | -8.615850e-47 |
| Msa0697040 | Msa1224480 | 0.812302 | 4.540479e-51 | -8.615850e-47 |
| Msa0697040 | Msa1239720 | 0.838525 | 2.731010e-57 | -8.615850e-47 |
| Msa0697040 | Msa1257800 | -0.812083 | 5.068543e-51 | -8.615850e-47 |
| Msa0697040 | Msa1259590 | -0.802788 | 4.751946e-49 | -8.615850e-47 |
| Msa0697040 | Msa1277660 | 0.831292 | 1.812892e-55 | -8.615850e-47 |
| Msa0697040 | Msa1284680 | 0.836744 | 7.821884e-57 | -8.615850e-47 |
| Msa0697040 | Msa1287440 | 0.800385 | 1.477562e-48 | -8.615850e-47 |
| Msa0697040 | Msa1291660 | 0.802043 | 6.765273e-49 | -8.615850e-47 |
| Msa0697040 | Msa1297290 | 0.821758 | 3.405910e-53 | -8.615850e-47 |
| Msa0697040 | Msa1298510 | 0.808412 | 3.137128e-50 | -8.615850e-47 |
| Msa0697040 | Msa1306850 | 0.818217 | 2.199810e-52 | -8.615850e-47 |
| Msa0697040 | Msa1308870 | 0.826130 | 3.211354e-54 | -8.615850e-47 |
| Msa0697040 | Msa1331000 | 0.808848 | 2.531814e-50 | -8.615850e-47 |
| Msa0697040 | Msa1331320 | 0.806839 | 6.768121e-50 | -8.615850e-47 |
| Msa0697040 | Msa1333730 | 0.800706 | 1.271036e-48 | -8.615850e-47 |
| Msa0697040 | Msa1344130 | 0.804810 | 1.806258e-49 | -8.615850e-47 |
| Msa0697040 | Msa1353470 | 0.839775 | 1.294907e-57 | -8.615850e-47 |
| Msa0697040 | Msa1353980 | 0.803901 | 2.794599e-49 | -8.615850e-47 |
| Msa0697040 | Msa1359040 | 0.800405 | 1.463809e-48 | -8.615850e-47 |
| Msa0697040 | Msa1370070 | -0.801600 | 8.342195e-49 | -8.615850e-47 |
| Msa0697040 | Msa1371940 | 0.802684 | 4.990504e-49 | -8.615850e-47 |
| Msa0697040 | Msa1372150 | 0.815170 | 1.060215e-51 | -8.615850e-47 |
| Msa0697040 | Msa1373030 | 0.809165 | 2.165266e-50 | -8.615850e-47 |
| Msa0697040 | Msa1374470 | 0.803195 | 3.914899e-49 | -8.615850e-47 |
| Msa0697040 | Msa1378940 | 0.801165 | 1.024164e-48 | -8.615850e-47 |
| Msa0697040 | Msa1385000 | 0.821087 | 4.866028e-53 | -8.615850e-47 |
| Msa0697040 | Msa1390050 | 0.804862 | 1.761917e-49 | -8.615850e-47 |
| Msa0697040 | Msa1392260 | 0.815059 | 1.122547e-51 | -8.615850e-47 |
| Msa0697040 | Msa1407060 | 0.804348 | 2.255838e-49 | -8.615850e-47 |
| Msa0697040 | Msa1408010 | 0.801605 | 8.321747e-49 | -8.615850e-47 |
| Msa0697040 | Msa1410210 | 0.804052 | 2.599348e-49 | -8.615850e-47 |
| Msa0697040 | Msa1410680 | 0.808977 | 2.375752e-50 | -8.615850e-47 |
| Msa0697040 | Msa1424680 | 0.800595 | 1.338926e-48 | -8.615850e-47 |
| Msa0697040 | Msa1427230 | 0.805544 | 1.268223e-49 | -8.615850e-47 |
| Msa0697040 | Msa1436480 | 0.821387 | 4.149182e-53 | -8.615850e-47 |
| Msa0697040 | Msa1445390 | -0.832909 | 7.221565e-56 | -8.615850e-47 |
| Msa0697040 | Msa1449340 | -0.816352 | 5.780488e-52 | -8.615850e-47 |
| Msa0697040 | Msa1457430 | 0.809260 | 2.066338e-50 | -8.615850e-47 |
| Msa0697040 | Msa1463900 | 0.802159 | 6.403839e-49 | -8.615850e-47 |
| Msa0697040 | Msa1466540 | 0.861330 | 1.107007e-63 | -8.615850e-47 |
| Msa0130970 | Msa0697040 | 0.803537 | 3.324541e-49 | -8.615850e-47 |
| Msa0131770 | Msa0697040 | 0.818596 | 1.805105e-52 | -8.615850e-47 |
| Msa0138020 | Msa0697040 | 0.810267 | 1.254620e-50 | -8.615850e-47 |
| Msa0140500 | Msa0697040 | -0.831924 | 1.267036e-55 | -8.615850e-47 |
| Msa0142220 | Msa0697040 | 0.802133 | 6.484084e-49 | -8.615850e-47 |
| Msa0145260 | Msa0697040 | 0.811171 | 7.998837e-51 | -8.615850e-47 |
| Msa0151180 | Msa0697040 | 0.801378 | 9.262341e-49 | -8.615850e-47 |
| Msa0165520 | Msa0697040 | 0.809014 | 2.332858e-50 | -8.615850e-47 |
| Msa0166870 | Msa0697040 | 0.802343 | 5.868415e-49 | -8.615850e-47 |
| Msa0178510 | Msa0697040 | 0.808826 | 2.559411e-50 | -8.615850e-47 |
| Msa0178930 | Msa0697040 | 0.805683 | 1.185786e-49 | -8.615850e-47 |
| Msa0187830 | Msa0697040 | 0.808296 | 3.320247e-50 | -8.615850e-47 |
| Msa0188150 | Msa0697040 | 0.806291 | 8.834661e-50 | -8.615850e-47 |
| Msa0188830 | Msa0697040 | 0.805720 | 1.165016e-49 | -8.615850e-47 |
| Msa0204840 | Msa0697040 | 0.803571 | 3.271790e-49 | -8.615850e-47 |
| Msa0211150 | Msa0697040 | 0.809475 | 1.857839e-50 | -8.615850e-47 |
| Msa0212040 | Msa0697040 | 0.822676 | 2.085145e-53 | -8.615850e-47 |
| Msa0212990 | Msa0697040 | 0.813270 | 2.786022e-51 | -8.615850e-47 |
| Msa0218810 | Msa0697040 | 0.825152 | 5.478128e-54 | -8.615850e-47 |
| Msa0220580 | Msa0697040 | 0.810167 | 1.318800e-50 | -8.615850e-47 |
| Msa0220740 | Msa0697040 | 0.803530 | 3.336998e-49 | -8.615850e-47 |
| Msa0223010 | Msa0697040 | 0.803695 | 3.083201e-49 | -8.615850e-47 |
| Msa0223910 | Msa0697040 | 0.803120 | 4.056773e-49 | -8.615850e-47 |
| Msa0225220 | Msa0697040 | 0.803539 | 3.322496e-49 | -8.615850e-47 |
| Msa0229380 | Msa0697040 | 0.812053 | 5.144232e-51 | -8.615850e-47 |
| Msa0367870 | Msa0697040 | 0.828789 | 7.395959e-55 | -8.615850e-47 |
| Msa0376590 | Msa0697040 | 0.803697 | 3.081099e-49 | -8.615850e-47 |
| Msa0381610 | Msa0697040 | -0.833321 | 5.701994e-56 | -8.615850e-47 |
| Msa0388960 | Msa0697040 | 0.801901 | 7.234486e-49 | -8.615850e-47 |
| Msa0390400 | Msa0697040 | -0.817794 | 2.741674e-52 | -8.615850e-47 |
| Msa0393620 | Msa0697040 | 0.818533 | 1.865213e-52 | -8.615850e-47 |
| Msa0395790 | Msa0697040 | 0.803280 | 3.758224e-49 | -8.615850e-47 |
| Msa0397750 | Msa0697040 | 0.806398 | 8.387508e-50 | -8.615850e-47 |
| Msa0426900 | Msa0697040 | 0.815164 | 1.063536e-51 | -8.615850e-47 |
| Msa0433410 | Msa0697040 | -0.819110 | 1.379214e-52 | -8.615850e-47 |
| Msa0440750 | Msa0697040 | 0.816894 | 4.369412e-52 | -8.615850e-47 |
| Msa0444750 | Msa0697040 | -0.812898 | 3.362397e-51 | -8.615850e-47 |
| Msa0452710 | Msa0697040 | 0.807371 | 5.221917e-50 | -8.615850e-47 |
| Msa0455760 | Msa0697040 | 0.822783 | 1.969005e-53 | -8.615850e-47 |
| Msa0458440 | Msa0697040 | 0.801496 | 8.760466e-49 | -8.615850e-47 |
| Msa0464100 | Msa0697040 | 0.803468 | 3.436800e-49 | -8.615850e-47 |
| Msa0464680 | Msa0697040 | 0.800027 | 1.747464e-48 | -8.615850e-47 |
| Msa0466120 | Msa0697040 | 0.815672 | 8.200211e-52 | -8.615850e-47 |
| Msa0469940 | Msa0697040 | -0.815775 | 7.777892e-52 | -8.615850e-47 |
| Msa0479660 | Msa0697040 | 0.820007 | 8.611553e-53 | -8.615850e-47 |
| Msa0481530 | Msa0697040 | 0.812801 | 3.530306e-51 | -8.615850e-47 |
| Msa0241140 | Msa0697040 | 0.809688 | 1.672380e-50 | -8.615850e-47 |
| Msa0243250 | Msa0697040 | 0.800603 | 1.334071e-48 | -8.615850e-47 |
| Msa0257460 | Msa0697040 | 0.800302 | 1.536026e-48 | -8.615850e-47 |
| Msa0264780 | Msa0697040 | 0.800896 | 1.162081e-48 | -8.615850e-47 |
| Msa0267370 | Msa0697040 | 0.825889 | 3.663845e-54 | -8.615850e-47 |
| Msa0270500 | Msa0697040 | 0.801859 | 7.379943e-49 | -8.615850e-47 |
| Msa0271530 | Msa0697040 | 0.812866 | 3.418075e-51 | -8.615850e-47 |
| Msa0273100 | Msa0697040 | 0.807342 | 5.295948e-50 | -8.615850e-47 |
| Msa0281640 | Msa0697040 | 0.802467 | 5.534035e-49 | -8.615850e-47 |
| Msa0285450 | Msa0697040 | 0.831729 | 1.415125e-55 | -8.615850e-47 |
| Msa0288100 | Msa0697040 | 0.811840 | 5.725872e-51 | -8.615850e-47 |
| Msa0290870 | Msa0697040 | 0.801088 | 1.061954e-48 | -8.615850e-47 |
| Msa0292930 | Msa0697040 | 0.800275 | 1.555823e-48 | -8.615850e-47 |
| Msa0305190 | Msa0697040 | 0.814333 | 1.624931e-51 | -8.615850e-47 |
| Msa0306210 | Msa0697040 | -0.821499 | 3.909184e-53 | -8.615850e-47 |
| Msa0319170 | Msa0697040 | 0.819852 | 9.344515e-53 | -8.615850e-47 |
| Msa0326520 | Msa0697040 | 0.814890 | 1.223429e-51 | -8.615850e-47 |
| Msa0330340 | Msa0697040 | 0.807436 | 5.060222e-50 | -8.615850e-47 |
| Msa0331000 | Msa0697040 | 0.813983 | 1.941289e-51 | -8.615850e-47 |
| Msa0340450 | Msa0697040 | 0.840490 | 8.428203e-58 | -8.615850e-47 |
| Msa0344690 | Msa0697040 | -0.828162 | 1.048004e-54 | -8.615850e-47 |
| Msa0357340 | Msa0697040 | 0.804278 | 2.333034e-49 | -8.615850e-47 |
| Msa0359030 | Msa0697040 | 0.807351 | 5.272793e-50 | -8.615850e-47 |
| Msa0363790 | Msa0697040 | 0.829074 | 6.308757e-55 | -8.615850e-47 |
| Msa0484780 | Msa0697040 | 0.810638 | 1.043327e-50 | -8.615850e-47 |
| Msa0486690 | Msa0697040 | 0.823791 | 1.145371e-53 | -8.615850e-47 |
| Msa0488560 | Msa0697040 | 0.819766 | 9.774955e-53 | -8.615850e-47 |
| Msa0512900 | Msa0697040 | 0.810674 | 1.024833e-50 | -8.615850e-47 |
| Msa0516170 | Msa0697040 | 0.802696 | 4.963086e-49 | -8.615850e-47 |
| Msa0518380 | Msa0697040 | 0.820046 | 8.437005e-53 | -8.615850e-47 |
| Msa0529890 | Msa0697040 | 0.820178 | 7.866943e-53 | -8.615850e-47 |
| Msa0532350 | Msa0697040 | 0.821443 | 4.027691e-53 | -8.615850e-47 |
| Msa0535630 | Msa0697040 | 0.808115 | 3.629001e-50 | -8.615850e-47 |
| Msa0545210 | Msa0697040 | 0.810137 | 1.338336e-50 | -8.615850e-47 |
| Msa0545700 | Msa0697040 | 0.814321 | 1.635426e-51 | -8.615850e-47 |
| Msa0558370 | Msa0697040 | 0.809210 | 2.117342e-50 | -8.615850e-47 |
| Msa0558690 | Msa0697040 | 0.802827 | 4.664122e-49 | -8.615850e-47 |
| Msa0559500 | Msa0697040 | 0.804505 | 2.091686e-49 | -8.615850e-47 |
| Msa0563840 | Msa0697040 | 0.803027 | 4.239642e-49 | -8.615850e-47 |
| Msa0569500 | Msa0697040 | 0.815890 | 7.333160e-52 | -8.615850e-47 |
| Msa0572480 | Msa0697040 | 0.800113 | 1.678268e-48 | -8.615850e-47 |
| Msa0585560 | Msa0697040 | 0.818265 | 2.145044e-52 | -8.615850e-47 |
| Msa0598160 | Msa0697040 | 0.806258 | 8.975746e-50 | -8.615850e-47 |
| Msa0600700 | Msa0697040 | 0.826967 | 2.028085e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697040 | MtrunA17_Chr4g0049651 | 95.588 | 68 | 3 | 0 | 1 | 68 | 1 | 68 | 3.62e-43 | 145 |
| Msa0697040 | MtrunA17_Chr4g0049671 | 72.059 | 68 | 10 | 1 | 1 | 68 | 1 | 59 | 2.58e-26 | 99.8 |
| Msa0697040 | MtrunA17_Chr4g0049701 | 80.769 | 52 | 10 | 0 | 17 | 68 | 14 | 65 | 1.06e-22 | 87.8 |
| Msa0697040 | MtrunA17_Chr4g0049691 | 50.450 | 111 | 11 | 3 | 1 | 67 | 1 | 111 | 5.42e-22 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697040 | AT1G74520.1 | 43.939 | 66 | 37 | 0 | 2 | 67 | 4 | 69 | 1.31e-11 | 56.6 |
| Msa0697040 | AT1G74520.2 | 43.939 | 66 | 37 | 0 | 2 | 67 | 4 | 69 | 1.31e-11 | 56.6 |
| Msa0697040 | AT5G62490.1 | 47.541 | 61 | 32 | 0 | 7 | 67 | 9 | 69 | 3.35e-11 | 55.5 |
Find 27 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTCAGGTCGTAGGATT+TGG | 0.253838 | 4_4:-67022611 | Msa0697040:five_prime_UTR |
| GTTATAGTACGGATTTATTC+AGG | 0.269672 | 4_4:-67022624 | Msa0697040:five_prime_UTR |
| AGCTTGAATTTGGTAGTAAA+TGG | 0.281705 | 4_4:-67022396 | Msa0697040:exon |
| TTCTTCATGGTTTCTCAAAC+TGG | 0.286518 | 4_4:-67022372 | Msa0697040:CDS |
| TTATTCAGGTCGTAGGATTT+GGG | 0.299422 | 4_4:-67022610 | Msa0697040:five_prime_UTR |
| CATACCATGCAAAATGATAA+AGG | 0.301623 | 4_4:+67022339 | None:intergenic |
| TTCCATTCGGAGCTTGAATT+TGG | 0.308560 | 4_4:-67022406 | Msa0697040:five_prime_UTR |
| CTCCGAATGGAAAAGGAAAA+TGG | 0.330831 | 4_4:+67022417 | None:intergenic |
| CCAAGGATTTGATCTCATAT+TGG | 0.353877 | 4_4:-67022020 | Msa0697040:CDS |
| GGTAGTAAATGGCTTCTTCA+TGG | 0.362420 | 4_4:-67022385 | Msa0697040:exon |
| ATATTCAAAGAGGTAAATTA+AGG | 0.374191 | 4_4:+67021987 | None:intergenic |
| AAATAGTAAAGTAGCTTAGT+TGG | 0.385187 | 4_4:+67022471 | None:intergenic |
| CCAATATGAGATCAAATCCT+TGG | 0.466673 | 4_4:+67022020 | None:intergenic |
| GTCAGTTTCAATTGCTTGTA+CGG | 0.466858 | 4_4:+67022056 | None:intergenic |
| ATTCAAGCTCCGAATGGAAA+AGG | 0.483180 | 4_4:+67022410 | None:intergenic |
| AGTAAAGTAGCTTAGTTGGT+AGG | 0.504642 | 4_4:+67022475 | None:intergenic |
| GACACGGAGCAAAATGTCAT+TGG | 0.524996 | 4_4:+67022530 | None:intergenic |
| AAAGAATTTACCGTAGAAGA+AGG | 0.542698 | 4_4:+67021953 | None:intergenic |
| TACGGATTTATTCAGGTCGT+AGG | 0.564676 | 4_4:-67022617 | Msa0697040:five_prime_UTR |
| TACCAAATTCAAGCTCCGAA+TGG | 0.564717 | 4_4:+67022404 | None:intergenic |
| CTTAGTTGGTAGGTTGCAAG+TGG | 0.575855 | 4_4:+67022485 | None:intergenic |
| GTTGGTAGGTTGCAAGTGGG+AGG | 0.596186 | 4_4:+67022489 | None:intergenic |
| TATTCAGGTCGTAGGATTTG+GGG | 0.598701 | 4_4:-67022609 | Msa0697040:five_prime_UTR |
| TCATAAAAGCATATTCAAAG+AGG | 0.621411 | 4_4:+67021977 | None:intergenic |
| TGACTCATATGCAGAAACCA+AGG | 0.655333 | 4_4:-67022037 | Msa0697040:CDS |
| TTAGTTGGTAGGTTGCAAGT+GGG | 0.704476 | 4_4:+67022486 | None:intergenic |
| GAAAATAAGATATACCGACA+CGG | 0.728030 | 4_4:+67022514 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCTATCTACTTTT+GGG | + | chr4_4:67021971-67021990 | None:intergenic | 15.0% |
| !!! | TTTTTTATTCTATCTACTTT+TGG | + | chr4_4:67021972-67021991 | None:intergenic | 15.0% |
| !! | GAATAAAAAAAGTTATAGTA+CGG | - | chr4_4:67021982-67022001 | Msa0697040:CDS | 15.0% |
| !!! | TTTTTGTTTTTTTGTGATTA+TGG | - | chr4_4:67022519-67022538 | Msa0697040:five_prime_UTR | 15.0% |
| !!! | TTTTATTCTATCTACTTTTG+GGG | + | chr4_4:67021970-67021989 | None:intergenic | 20.0% |
| !! | GAAAAAGATGAAGAAAATAA+AGG | + | chr4_4:67022326-67022345 | None:intergenic | 20.0% |
| !! | TGTCAAAACAATAATGTAAA+AGG | + | chr4_4:67022480-67022499 | None:intergenic | 20.0% |
| !!! | TTTTTTGTGATTATGGTTTT+TGG | - | chr4_4:67022526-67022545 | Msa0697040:five_prime_UTR | 20.0% |
| !! | ATATTCAAAGAGGTAAATTA+AGG | + | chr4_4:67022633-67022652 | None:intergenic | 20.0% |
| ! | AAATAGTAAAGTAGCTTAGT+TGG | + | chr4_4:67022149-67022168 | None:intergenic | 25.0% |
| ! | AAGATGAAGAAAATAAAGGA+GGG | + | chr4_4:67022322-67022341 | None:intergenic | 25.0% |
| ! | AAAGATGAAGAAAATAAAGG+AGG | + | chr4_4:67022323-67022342 | None:intergenic | 25.0% |
| !! | TTATTTCCTTCTCTTTTTCT+AGG | - | chr4_4:67022384-67022403 | Msa0697040:exon | 25.0% |
| !! | TCATAAAAGCATATTCAAAG+AGG | + | chr4_4:67022643-67022662 | None:intergenic | 25.0% |
| GTTATAGTACGGATTTATTC+AGG | - | chr4_4:67021993-67022012 | Msa0697040:CDS | 30.0% | |
| GAAAATAAGATATACCGACA+CGG | + | chr4_4:67022106-67022125 | None:intergenic | 30.0% | |
| ! | TTCCATTTTCCTTTTCCATT+CGG | - | chr4_4:67022198-67022217 | Msa0697040:intron | 30.0% |
| ! | AGCTTGAATTTGGTAGTAAA+TGG | - | chr4_4:67022221-67022240 | Msa0697040:intron | 30.0% |
| ! | AATGCCTTTATCATTTTGCA+TGG | - | chr4_4:67022274-67022293 | Msa0697040:intron | 30.0% |
| CATACCATGCAAAATGATAA+AGG | + | chr4_4:67022281-67022300 | None:intergenic | 30.0% | |
| TTTATTCAGGTCGTAGGATT+TGG | - | chr4_4:67022006-67022025 | Msa0697040:CDS | 35.0% | |
| TTATTCAGGTCGTAGGATTT+GGG | - | chr4_4:67022007-67022026 | Msa0697040:CDS | 35.0% | |
| AGAAGCAGAAAAAACAAGAG+AGG | - | chr4_4:67022034-67022053 | Msa0697040:CDS | 35.0% | |
| GAAGCAGAAAAAACAAGAGA+GGG | - | chr4_4:67022035-67022054 | Msa0697040:CDS | 35.0% | |
| AGTAAAGTAGCTTAGTTGGT+AGG | + | chr4_4:67022145-67022164 | None:intergenic | 35.0% | |
| TTCTTCATGGTTTCTCAAAC+TGG | - | chr4_4:67022245-67022264 | Msa0697040:intron | 35.0% | |
| TCCTATGTAAGTTCTTGATC+TGG | - | chr4_4:67022427-67022446 | Msa0697040:five_prime_UTR | 35.0% | |
| !! | TGTGATTATGGTTTTTGGAC+AGG | - | chr4_4:67022531-67022550 | Msa0697040:five_prime_UTR | 35.0% |
| GTCAGTTTCAATTGCTTGTA+CGG | + | chr4_4:67022564-67022583 | None:intergenic | 35.0% | |
| CCAATATGAGATCAAATCCT+TGG | + | chr4_4:67022600-67022619 | None:intergenic | 35.0% | |
| CCAAGGATTTGATCTCATAT+TGG | - | chr4_4:67022597-67022616 | Msa0697040:five_prime_UTR | 35.0% | |
| ! | CTTTTATGAGCCTTCTTCTA+CGG | - | chr4_4:67022654-67022673 | Msa0697040:five_prime_UTR | 35.0% |
| TACGGATTTATTCAGGTCGT+AGG | - | chr4_4:67022000-67022019 | Msa0697040:CDS | 40.0% | |
| TATTCAGGTCGTAGGATTTG+GGG | - | chr4_4:67022008-67022027 | Msa0697040:CDS | 40.0% | |
| CGTTCGCATTTACTTCAAGT+AGG | + | chr4_4:67022062-67022081 | None:intergenic | 40.0% | |
| ACTTGAAGTAAATGCGAACG+AGG | - | chr4_4:67022062-67022081 | Msa0697040:CDS | 40.0% | |
| CTTGAAGTAAATGCGAACGA+GGG | - | chr4_4:67022063-67022082 | Msa0697040:CDS | 40.0% | |
| ! | AATGACATTTTGCTCCGTGT+CGG | - | chr4_4:67022089-67022108 | Msa0697040:intron | 40.0% |
| !! | TTAGTTGGTAGGTTGCAAGT+GGG | + | chr4_4:67022134-67022153 | None:intergenic | 40.0% |
| CTCCGAATGGAAAAGGAAAA+TGG | + | chr4_4:67022203-67022222 | None:intergenic | 40.0% | |
| ATTCAAGCTCCGAATGGAAA+AGG | + | chr4_4:67022210-67022229 | None:intergenic | 40.0% | |
| TTCCATTCGGAGCTTGAATT+TGG | - | chr4_4:67022211-67022230 | Msa0697040:CDS | 40.0% | |
| TACCAAATTCAAGCTCCGAA+TGG | + | chr4_4:67022216-67022235 | None:intergenic | 40.0% | |
| GGTAGTAAATGGCTTCTTCA+TGG | - | chr4_4:67022232-67022251 | Msa0697040:intron | 40.0% | |
| AAGAGGCCTAGAAAAAGAGA+AGG | + | chr4_4:67022393-67022412 | None:intergenic | 40.0% | |
| GCCAGATCAAGAACTTACAT+AGG | + | chr4_4:67022431-67022450 | None:intergenic | 40.0% | |
| AAGTTCTTGATCTGGCTGTT+TGG | - | chr4_4:67022435-67022454 | Msa0697040:five_prime_UTR | 40.0% | |
| TGACTCATATGCAGAAACCA+AGG | - | chr4_4:67022580-67022599 | Msa0697040:intron | 40.0% | |
| GACACGGAGCAAAATGTCAT+TGG | + | chr4_4:67022090-67022109 | None:intergenic | 45.0% | |
| !! | CTTAGTTGGTAGGTTGCAAG+TGG | + | chr4_4:67022135-67022154 | None:intergenic | 45.0% |
| ! | TTCTAGGCCTCTTTTTGCTC+TGG | - | chr4_4:67022400-67022419 | Msa0697040:five_prime_UTR | 45.0% |
| GGATACACCAGAGCAAAAAG+AGG | + | chr4_4:67022410-67022429 | None:intergenic | 45.0% | |
| ! | GTTGGTAGGTTGCAAGTGGG+AGG | + | chr4_4:67022131-67022150 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 67021960 | 67022679 | 67021960 | ID=Msa0697040;Name=Msa0697040 |
| chr4_4 | mRNA | 67021960 | 67022679 | 67021960 | ID=Msa0697040-mRNA-1;Parent=Msa0697040;Name=Msa0697040-mRNA-1;_AED=0.48;_eAED=0.48;_QI=252|1|0.75|1|0|0|4|0|69 |
| chr4_4 | exon | 67021960 | 67022086 | 67021960 | ID=Msa0697040-mRNA-1:exon:19598;Parent=Msa0697040-mRNA-1 |
| chr4_4 | exon | 67022207 | 67022233 | 67022207 | ID=Msa0697040-mRNA-1:exon:19597;Parent=Msa0697040-mRNA-1 |
| chr4_4 | exon | 67022344 | 67022555 | 67022344 | ID=Msa0697040-mRNA-1:exon:19596;Parent=Msa0697040-mRNA-1 |
| chr4_4 | exon | 67022584 | 67022679 | 67022584 | ID=Msa0697040-mRNA-1:exon:19595;Parent=Msa0697040-mRNA-1 |
| chr4_4 | five_prime_UTR | 67022584 | 67022679 | 67022584 | ID=Msa0697040-mRNA-1:five_prime_utr;Parent=Msa0697040-mRNA-1 |
| chr4_4 | five_prime_UTR | 67022400 | 67022555 | 67022400 | ID=Msa0697040-mRNA-1:five_prime_utr;Parent=Msa0697040-mRNA-1 |
| chr4_4 | CDS | 67022344 | 67022399 | 67022344 | ID=Msa0697040-mRNA-1:cds;Parent=Msa0697040-mRNA-1 |
| chr4_4 | CDS | 67022207 | 67022233 | 67022207 | ID=Msa0697040-mRNA-1:cds;Parent=Msa0697040-mRNA-1 |
| chr4_4 | CDS | 67021960 | 67022086 | 67021960 | ID=Msa0697040-mRNA-1:cds;Parent=Msa0697040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
