AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0361780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361780 MtrunA17_Chr3g0100961 74.221 931 202 9 1 923 4 904 0.0 1333
Msa0361780 MtrunA17_Chr3g0100831 72.892 937 213 9 1 927 4 909 0.0 1316
Msa0361780 MtrunA17_Chr3g0100971 81.060 755 117 3 1 753 4 734 0.0 1215
Msa0361780 MtrunA17_Chr3g0100851 75.695 827 157 6 105 927 1 787 0.0 1194
Msa0361780 MtrunA17_Chr3g0112511 67.910 938 261 11 1 931 4 908 0.0 1186
Msa0361780 MtrunA17_Chr3g0100801 72.845 847 152 7 1 845 1 771 0.0 1178
Msa0361780 MtrunA17_Chr3g0100761 76.291 755 113 5 1 753 4 694 0.0 1123
Msa0361780 MtrunA17_Chr3g0101321 59.197 946 339 12 1 933 4 915 0.0 1029
Msa0361780 MtrunA17_Chr1g0189351 57.326 935 344 11 1 910 4 908 0.0 986
Msa0361780 MtrunA17_Chr3g0101331 57.889 919 340 10 1 895 4 899 0.0 984
Msa0361780 MtrunA17_Chr3g0100731 72.727 693 160 4 240 927 1 669 0.0 952
Msa0361780 MtrunA17_Chr3g0100681 74.465 607 128 4 182 786 1 582 0.0 857
Msa0361780 MtrunA17_Chr3g0101271 50.054 919 406 16 18 923 8 886 0.0 812
Msa0361780 MtrunA17_Chr3g0101241 49.946 919 407 16 18 923 8 886 0.0 808
Msa0361780 MtrunA17_Chr3g0101201 48.459 941 429 18 3 923 16 920 0.0 793
Msa0361780 MtrunA17_Chr3g0101231 48.574 947 429 20 3 923 14 928 0.0 785
Msa0361780 MtrunA17_Chr3g0080741 45.868 968 460 20 2 937 5 940 0.0 785
Msa0361780 MtrunA17_Chr3g0101181 49.297 925 403 15 16 910 29 917 0.0 781
Msa0361780 MtrunA17_Chr3g0101011 48.051 949 436 21 3 923 14 933 0.0 772
Msa0361780 MtrunA17_Chr3g0101221 48.786 906 421 14 2 890 7 886 0.0 769
Msa0361780 MtrunA17_Chr3g0080601 46.251 947 455 17 2 923 5 922 0.0 762
Msa0361780 MtrunA17_Chr3g0080751 45.483 952 459 17 2 924 5 925 0.0 753
Msa0361780 MtrunA17_Chr3g0080791 45.675 948 455 15 2 921 5 920 0.0 750
Msa0361780 MtrunA17_Chr3g0094301 45.378 952 457 18 2 923 5 923 0.0 748
Msa0361780 MtrunA17_Chr7g0229761 45.378 952 457 18 2 923 5 923 0.0 748
Msa0361780 MtrunA17_Chr3g0101251 46.921 942 411 19 3 923 9 882 0.0 742
Msa0361780 MtrunA17_Chr3g0080771 44.620 948 465 15 2 921 5 920 0.0 739
Msa0361780 MtrunA17_Chr1g0151481 44.795 951 464 15 2 923 5 923 0.0 728
Msa0361780 MtrunA17_Chr3g0080731 43.730 949 477 16 2 923 5 923 0.0 712
Msa0361780 MtrunA17_Chr3g0081391 43.337 953 483 14 3 928 6 928 0.0 700
Msa0361780 MtrunA17_Chr3g0081341 44.237 963 476 20 2 935 70 1000 0.0 697
Msa0361780 MtrunA17_Chr3g0081211 43.274 959 491 12 2 935 5 935 0.0 694
Msa0361780 MtrunA17_Chr3g0080631 42.812 953 445 16 2 928 5 883 0.0 691
Msa0361780 MtrunA17_Chr3g0081361 42.614 941 479 15 16 928 27 934 0.0 663
Msa0361780 MtrunA17_Chr3g0081191 41.745 963 497 18 2 935 5 932 0.0 657
Msa0361780 MtrunA17_Chr3g0100781 85.366 369 54 0 1 369 4 372 0.0 638
Msa0361780 MtrunA17_Chr3g0081371 42.450 947 472 20 16 928 27 934 0.0 634
Msa0361780 MtrunA17_Chr3g0100791 72.669 472 99 5 460 927 1 446 0.0 629
Msa0361780 MtrunA17_Chr3g0100701 69.358 483 118 5 446 925 282 737 0.0 616
Msa0361780 MtrunA17_Chr3g0100701 72.857 280 71 2 1 276 4 282 3.39e-131 412
Msa0361780 MtrunA17_Chr3g0081181 41.675 955 482 21 2 928 5 912 0.0 614
Msa0361780 MtrunA17_Chr3g0101391 52.087 599 249 6 315 900 3 576 0.0 561
Msa0361780 MtrunA17_Chr5g0410001 38.403 914 501 19 2 895 4 875 0.0 555
Msa0361780 MtrunA17_Chr3g0084351 48.750 560 275 7 68 621 1 554 2.97e-178 528
Msa0361780 MtrunA17_Chr5g0410031 37.513 949 522 22 2 921 5 911 3.04e-176 536
Msa0361780 MtrunA17_Chr3g0080721 41.252 703 360 15 256 936 2 673 6.51e-162 490
Msa0361780 MtrunA17_Chr1g0189271 69.969 323 97 0 158 480 1 323 1.45e-161 476
Msa0361780 MtrunA17_Chr5g0410021 36.580 924 502 22 2 895 5 874 8.33e-155 480
Msa0361780 MtrunA17_Chr5g0409991 36.147 924 504 20 2 895 5 872 7.01e-151 470
Msa0361780 MtrunA17_Chr5g0409971 35.814 927 508 21 2 895 5 877 1.01e-147 462
Msa0361780 MtrunA17_Chr3g0101211 55.231 411 173 5 197 606 1 401 1.36e-145 438
Msa0361780 MtrunA17_Chr3g0080651 40.909 638 324 16 321 936 246 852 3.63e-129 410
Msa0361780 MtrunA17_Chr3g0080651 56.164 219 87 5 2 213 8 224 3.80e-62 227
Msa0361780 MtrunA17_Chr3g0101421 64.912 285 93 3 1 279 4 287 1.71e-122 374
Msa0361780 MtrunA17_Chr5g0444301 49.359 468 205 5 438 897 1 444 1.26e-115 362
Msa0361780 MtrunA17_Chr1g0149071 39.269 629 207 11 227 852 1 457 5.24e-115 360
Msa0361780 MtrunA17_Chr3g0100721 83.333 216 36 0 1 216 4 219 2.27e-112 344
Msa0361780 MtrunA17_Chr3g0101361 46.154 481 236 10 459 923 295 768 5.70e-108 352
Msa0361780 MtrunA17_Chr3g0101361 48.571 280 134 4 3 276 16 291 3.29e-71 251
Msa0361780 MtrunA17_Chr5g0404741 30.084 954 561 22 1 910 4 895 9.99e-106 349
Msa0361780 MtrunA17_Chr4g0037421 30.366 955 564 26 2 898 42 953 3.84e-103 344
Msa0361780 MtrunA17_Chr2g0299001 28.025 967 593 26 3 919 6 919 4.33e-94 318
Msa0361780 MtrunA17_Chr7g0219851 29.119 965 553 28 2 898 7 908 8.14e-93 315
Msa0361780 MtrunA17_Chr1g0189321 61.345 238 84 3 401 632 1 236 1.24e-83 269
Msa0361780 MtrunA17_Chr1g0189281 42.821 397 191 7 508 893 2 373 6.98e-82 270
Msa0361780 MtrunA17_Chr3g0096971 69.714 175 53 0 259 433 1 175 4.13e-75 243
Msa0361780 MtrunA17_Chr3g0101341 48.897 272 120 5 20 276 1 268 8.38e-72 238
Msa0361780 MtrunA17_Chr3g0101401 63.043 184 62 2 83 260 1 184 7.68e-70 229
Msa0361780 MtrunA17_Chr1g0189551 27.166 935 541 29 16 925 51 870 3.81e-69 247
Msa0361780 MtrunA17_Chr6g0467961 27.853 815 483 26 3 789 6 743 5.13e-68 244
Msa0361780 MtrunA17_Chr7g0248221 29.860 643 386 22 16 632 23 626 3.80e-67 241
Msa0361780 MtrunA17_Chr3g0090651 27.601 913 533 38 39 893 52 894 3.52e-66 240
Msa0361780 MtrunA17_Chr1g0197241 26.452 930 555 32 19 892 668 1524 9.47e-66 241
Msa0361780 MtrunA17_Chr3g0091081 25.988 962 571 36 28 915 41 935 5.22e-65 239
Msa0361780 MtrunA17_Chr5g0414311 26.409 958 581 32 2 908 5 889 1.08e-64 237
Msa0361780 MtrunA17_Chr3g0091061 27.552 911 536 37 39 893 52 894 2.91e-64 236
Msa0361780 MtrunA17_Chr6g0468121 27.108 830 490 29 3 799 6 753 1.51e-63 233
Msa0361780 MtrunA17_Chr3g0080701 54.378 217 83 5 2 206 5 217 1.07e-62 212
Msa0361780 MtrunA17_Chr6g0468451 26.124 934 578 29 3 900 6 863 1.22e-62 231
Msa0361780 MtrunA17_Chr6g0468151 27.634 930 559 40 1 899 1 847 1.35e-62 231
Msa0361780 MtrunA17_Chr5g0430721 25.291 945 576 31 3 900 47 908 4.84e-62 229
Msa0361780 MtrunA17_Chr2g0309721 25.934 964 593 41 30 944 43 934 8.02e-62 229
Msa0361780 MtrunA17_Chr6g0470011 26.851 905 571 36 6 883 9 849 1.48e-61 228
Msa0361780 MtrunA17_Chr3g0082871 25.867 750 448 23 6 724 8 680 1.63e-61 222
Msa0361780 MtrunA17_Chr3g0123111 26.078 928 585 33 3 900 6 862 1.87e-61 227
Msa0361780 MtrunA17_Chr8g0348931 27.282 942 558 35 30 911 43 917 4.93e-61 226
Msa0361780 MtrunA17_Chr3g0092261 26.467 937 575 37 25 911 83 955 9.92e-61 226
Msa0361780 MtrunA17_Chr8g0337891 27.834 697 433 29 1 671 9 661 1.29e-60 221
Msa0361780 MtrunA17_Chr2g0316291 25.896 865 524 31 6 819 13 811 2.30e-60 224
Msa0361780 MtrunA17_Chr1g0164611 28.272 810 452 35 39 791 52 789 2.52e-60 223
Msa0361780 MtrunA17_Chr1g0155991 27.133 844 531 28 3 821 6 790 2.58e-60 223
Msa0361780 MtrunA17_Chr5g0414181 26.288 932 577 36 2 892 5 867 4.31e-60 222
Msa0361780 MtrunA17_Chr5g0430621 27.464 761 453 28 3 730 6 700 5.05e-60 222
Msa0361780 MtrunA17_Chr3g0089911 27.381 672 428 21 25 674 38 671 9.81e-60 216
Msa0361780 MtrunA17_Chr5g0415471 26.597 955 562 35 2 899 5 877 1.01e-59 222
Msa0361780 MtrunA17_Chr4g0025391 26.498 951 578 38 14 911 27 909 1.50e-59 222
Msa0361780 MtrunA17_Chr6g0468021 27.995 743 441 25 3 730 6 669 2.01e-59 221
Msa0361780 MtrunA17_Chr3g0090691 27.595 790 470 31 39 791 52 776 2.10e-59 221
Msa0361780 MtrunA17_Chr3g0090141 25.768 912 555 33 38 894 51 895 4.61e-59 220
Msa0361780 MtrunA17_Chr3g0082101 28.987 790 420 36 39 791 52 737 5.44e-59 218
Msa0361780 MtrunA17_Chr6g0470081 26.688 948 571 38 6 910 9 875 9.17e-59 219
Msa0361780 MtrunA17_Chr3g0082391 26.725 797 487 27 30 789 42 778 1.97e-58 215
Msa0361780 MtrunA17_Chr7g0257541 26.559 930 514 34 16 897 25 833 2.34e-58 216
Msa0361780 MtrunA17_Chr5g0431051 26.151 956 546 34 3 912 6 847 3.62e-58 216
Msa0361780 MtrunA17_Chr3g0082311 26.551 919 551 34 35 899 47 895 7.11e-58 216
Msa0361780 MtrunA17_Chr3g0089871 27.596 703 414 25 28 700 41 678 8.50e-58 216
Msa0361780 MtrunA17_Chr3g0090371 25.882 935 556 39 38 911 51 909 8.57e-58 216
Msa0361780 MtrunA17_Chr6g0468101 25.782 927 551 34 3 900 6 824 9.61e-58 216
Msa0361780 MtrunA17_Chr1g0169901 27.284 843 496 31 31 832 43 809 1.54e-57 215
Msa0361780 MtrunA17_Chr1g0164391 26.129 930 553 35 35 899 47 907 1.57e-57 216
Msa0361780 MtrunA17_Chr5g0430141 26.474 967 565 37 3 901 6 894 1.95e-57 214
Msa0361780 MtrunA17_Chr3g0087841 25.527 948 560 39 30 911 43 910 1.96e-57 215
Msa0361780 MtrunA17_Chr7g0248431 30.962 520 300 19 16 510 23 508 2.26e-57 207
Msa0361780 MtrunA17_Chr2g0282991 27.155 696 437 23 31 701 44 694 4.41e-57 214
Msa0361780 MtrunA17_Chr3g0089601 26.744 860 506 36 30 839 41 826 5.24e-57 212
Msa0361780 MtrunA17_Chr1g0155321 26.562 832 502 31 3 800 6 762 5.51e-57 213
Msa0361780 MtrunA17_Chr3g0081841 48.357 213 106 1 158 370 1 209 1.01e-56 204
Msa0361780 MtrunA17_Chr3g0081841 43.590 156 84 4 434 586 189 343 7.29e-27 115
Msa0361780 MtrunA17_Chr7g0257221 26.586 662 414 19 1 621 1 631 1.59e-56 210
Msa0361780 MtrunA17_Chr3g0092241 25.742 944 564 39 30 911 43 911 1.70e-56 212
Msa0361780 MtrunA17_Chr6g0471941 28.024 678 421 21 1 651 9 646 1.76e-56 211
Msa0361780 MtrunA17_Chr5g0430291 26.279 860 511 28 3 819 6 785 1.92e-56 211
Msa0361780 MtrunA17_Chr4g0009781 28.201 656 378 21 122 748 119 710 2.18e-56 211
Msa0361780 MtrunA17_Chr5g0433771 28.421 665 391 19 7 632 14 632 3.96e-56 209
Msa0361780 MtrunA17_Chr3g0089991 26.244 804 481 28 30 789 43 778 4.39e-56 211
Msa0361780 MtrunA17_Chr6g0468271 26.593 816 510 32 3 799 6 751 4.82e-56 211
Msa0361780 MtrunA17_Chr3g0082881 25.195 897 535 29 1 832 4 829 6.59e-56 208
Msa0361780 MtrunA17_Chr3g0089501 26.512 860 508 36 30 839 41 826 8.57e-56 208
Msa0361780 MtrunA17_Chr6g0467911 26.867 830 498 36 3 799 6 759 1.02e-55 207
Msa0361780 MtrunA17_Chr3g0089761 26.555 836 477 28 60 836 67 824 1.03e-55 210
Msa0361780 MtrunA17_Chr1g0197201 26.211 950 566 35 12 892 453 1336 1.30e-55 210
Msa0361780 MtrunA17_Chr8g0338391 26.855 674 407 21 1 630 9 640 1.97e-55 208
Msa0361780 MtrunA17_Chr6g0475491 26.549 678 441 22 1 656 9 651 2.20e-55 206
Msa0361780 MtrunA17_Chr3g0082811 26.783 687 403 23 153 800 146 771 2.26e-55 206
Msa0361780 MtrunA17_Chr8g0346831 27.189 651 414 21 1 630 9 620 2.44e-55 208
Msa0361780 MtrunA17_Chr8g0355411 27.057 717 469 24 2 701 11 690 3.32e-55 206
Msa0361780 MtrunA17_Chr3g0090431 26.427 806 476 32 163 911 37 782 3.71e-55 207
Msa0361780 MtrunA17_Chr8g0338261 25.515 631 425 17 17 632 24 624 4.07e-55 207
Msa0361780 MtrunA17_Chr3g0086181 25.803 903 549 33 35 892 42 868 1.04e-54 205
Msa0361780 MtrunA17_Chr3g0089541 26.420 704 417 23 30 700 43 678 1.05e-54 207
Msa0361780 MtrunA17_Chr3g0082891 25.177 846 525 30 1 800 4 787 1.44e-54 204
Msa0361780 MtrunA17_Chr7g0248531 26.362 789 488 27 60 819 65 789 1.50e-54 205
Msa0361780 MtrunA17_Chr4g0020501 29.915 585 338 21 61 631 23 549 2.22e-54 204
Msa0361780 MtrunA17_Chr8g0352831 25.413 968 573 33 37 935 50 937 2.48e-54 206
Msa0361780 MtrunA17_Chr5g0446611 26.118 850 488 37 31 821 44 812 4.02e-54 203
Msa0361780 MtrunA17_Chr3g0082131 27.263 928 525 39 39 893 50 900 4.48e-54 205
Msa0361780 MtrunA17_Chr3g0085931 26.129 930 579 31 6 900 9 865 5.53e-54 204
Msa0361780 MtrunA17_Chr3g0086161 25.514 925 535 36 35 885 42 886 5.61e-54 204
Msa0361780 MtrunA17_Chr3g0086151 26.159 906 550 34 35 897 42 871 6.02e-54 202
Msa0361780 MtrunA17_Chr3g0089961 26.467 733 428 26 30 724 43 702 6.81e-54 203
Msa0361780 MtrunA17_Chr3g0100981 76.471 136 30 1 789 922 1 136 7.20e-54 184
Msa0361780 MtrunA17_Chr3g0100771 76.471 136 30 1 789 922 1 136 7.20e-54 184
Msa0361780 MtrunA17_Chr4g0027251 26.285 856 482 30 3 800 6 770 8.18e-54 203
Msa0361780 MtrunA17_Chr8g0352861 24.732 934 575 33 25 896 38 905 9.95e-54 204
Msa0361780 MtrunA17_Chr3g0089811 27.135 726 429 26 30 724 43 699 1.03e-53 204
Msa0361780 MtrunA17_Chr5g0430511 26.092 847 473 30 13 800 16 768 1.04e-53 203
Msa0361780 MtrunA17_Chr3g0086621 26.327 904 546 34 35 893 42 870 1.05e-53 203
Msa0361780 MtrunA17_Chr5g0429961 25.300 834 508 26 3 800 6 760 1.06e-53 203
Msa0361780 MtrunA17_Chr3g0089421 26.576 809 470 34 30 789 43 776 1.19e-53 204
Msa0361780 MtrunA17_Chr3g0089651 25.260 962 586 38 30 930 43 932 1.21e-53 204
Msa0361780 MtrunA17_Chr7g0244231 25.290 949 559 33 3 884 6 871 1.83e-53 202
Msa0361780 MtrunA17_Chr4g0010261 28.707 634 370 21 122 726 119 699 2.73e-53 202
Msa0361780 MtrunA17_Chr3g0087581 26.087 920 554 33 35 906 42 883 4.38e-53 202
Msa0361780 MtrunA17_Chr3g0101351 47.748 222 107 5 3 219 18 235 9.00e-53 186
Msa0361780 MtrunA17_Chr6g0468331 26.833 682 413 21 3 634 6 651 1.05e-52 197
Msa0361780 MtrunA17_Chr3g0089781 27.250 800 474 32 30 789 43 774 1.07e-52 200
Msa0361780 MtrunA17_Chr3g0085651 25.303 909 573 32 35 901 42 886 1.28e-52 201
Msa0361780 MtrunA17_Chr3g0086221 25.193 905 555 31 35 892 42 871 1.80e-52 200
Msa0361780 MtrunA17_Chr5g0430641 25.559 849 497 32 1 800 1 763 2.31e-52 199
Msa0361780 MtrunA17_Chr8g0338621 25.220 682 445 23 1 657 9 650 2.94e-52 194
Msa0361780 MtrunA17_Chr3g0090401 24.229 908 554 32 38 894 262 1086 4.29e-52 199
Msa0361780 MtrunA17_Chr5g0414201 26.308 707 439 22 2 677 5 660 4.72e-52 197
Msa0361780 MtrunA17_Chr6g0468341 29.470 509 310 14 3 495 6 481 4.74e-52 197
Msa0361780 MtrunA17_Chr3g0089591 25.501 749 466 26 30 727 43 750 6.34e-52 198
Msa0361780 MtrunA17_Chr4g0051651 26.087 667 423 20 6 630 31 669 7.06e-52 194
Msa0361780 MtrunA17_Chr5g0429951 26.520 773 447 26 3 730 6 702 8.20e-52 197
Msa0361780 MtrunA17_Chr3g0087701 25.810 957 560 39 13 897 18 896 8.76e-52 197
Msa0361780 MtrunA17_Chr1g0189301 65.441 136 40 2 63 194 1 133 1.55e-51 177
Msa0361780 MtrunA17_Chr3g0089211 26.890 807 468 32 30 789 90 821 2.36e-51 196
Msa0361780 MtrunA17_Chr7g0257201 26.260 655 410 20 16 632 23 642 3.22e-51 194
Msa0361780 MtrunA17_Chr3g0100841 83.495 103 17 0 1 103 4 106 3.29e-51 175
Msa0361780 MtrunA17_Chr5g0430441 26.013 765 437 24 3 730 6 678 3.78e-51 195
Msa0361780 MtrunA17_Chr4g0010201 25.886 734 433 27 33 726 36 698 4.34e-51 195
Msa0361780 MtrunA17_Chr3g0082351 25.468 801 489 26 30 789 42 775 5.03e-51 195
Msa0361780 MtrunA17_Chr3g0089931 28.656 506 294 13 19 508 32 486 6.14e-51 188
Msa0361780 MtrunA17_Chr1g0164631 24.458 830 460 28 39 791 51 790 7.02e-51 194
Msa0361780 MtrunA17_Chr5g0430581 25.772 842 490 29 3 800 6 756 7.45e-51 194
Msa0361780 MtrunA17_Chr1g0169951 27.189 651 409 20 6 621 9 629 8.25e-51 192
Msa0361780 MtrunA17_Chr4g0010221 28.331 653 379 23 122 748 119 708 1.08e-50 194
Msa0361780 MtrunA17_Chr3g0091041 30.998 471 261 20 57 510 64 487 1.41e-50 187
Msa0361780 MtrunA17_Chr3g0113481 25.707 778 465 28 61 800 66 768 1.65e-50 191
Msa0361780 MtrunA17_Chr3g0089251 27.070 809 464 33 30 789 72 803 1.95e-50 194
Msa0361780 MtrunA17_Chr5g0430951 25.098 765 442 23 3 730 6 676 2.24e-50 192
Msa0361780 MtrunA17_Chr3g0089471 26.337 748 462 29 28 727 41 747 5.91e-50 192
Msa0361780 MtrunA17_Chr5g0414231 26.426 526 332 13 3 508 6 496 1.07e-49 184
Msa0361780 MtrunA17_Chr3g0113791 25.291 858 512 32 37 850 48 820 2.25e-49 190
Msa0361780 MtrunA17_Chr8g0338671 28.512 484 323 11 157 632 39 507 2.56e-49 185
Msa0361780 MtrunA17_Chr3g0084971 28.424 679 408 26 26 677 39 666 2.71e-49 190
Msa0361780 MtrunA17_Chr6g0470021 25.940 798 503 31 115 883 1 739 2.72e-49 188
Msa0361780 MtrunA17_Chr7g0257191 25.348 647 405 21 16 621 23 632 1.83e-48 186
Msa0361780 MtrunA17_Chr7g0221481 26.384 849 481 36 35 821 42 808 2.08e-48 186
Msa0361780 MtrunA17_Chr3g0100691 74.627 134 32 1 789 920 1 134 2.86e-48 167
Msa0361780 MtrunA17_Chr7g0218941 25.446 672 439 21 1 651 9 639 5.36e-48 185
Msa0361780 MtrunA17_Chr5g0415511 25.627 558 350 14 2 529 5 527 7.28e-48 182
Msa0361780 MtrunA17_Chr3g0085331 25.482 934 559 37 30 901 41 899 8.60e-48 185
Msa0361780 MtrunA17_Chr4g0010251 29.664 536 321 18 202 724 200 692 1.02e-47 184
Msa0361780 MtrunA17_Chr1g0147141 25.647 889 527 41 61 892 81 892 1.05e-47 184
Msa0361780 MtrunA17_Chr3g0082791 25.963 909 551 35 35 897 49 881 1.10e-47 184
Msa0361780 MtrunA17_Chr3g0085501 25.610 820 495 31 30 800 41 794 1.37e-47 184
Msa0361780 MtrunA17_Chr3g0085561 25.751 932 534 38 30 901 41 874 2.25e-47 183
Msa0361780 MtrunA17_Chr3g0100911 42.913 254 118 3 623 873 1 230 3.67e-47 168
Msa0361780 MtrunA17_Chr3g0083621 25.309 972 550 38 14 888 1 893 9.33e-47 182
Msa0361780 MtrunA17_Chr2g0299151 26.374 819 440 32 30 824 42 721 1.61e-46 181
Msa0361780 MtrunA17_Chr2g0299091 25.594 715 452 23 35 721 14 676 3.29e-46 180
Msa0361780 MtrunA17_Chr3g0085471 25.495 910 568 35 30 898 41 881 3.93e-46 180
Msa0361780 MtrunA17_Chr1g0164581 26.940 928 504 39 39 893 50 876 5.16e-46 179
Msa0361780 MtrunA17_Chr3g0085451 26.309 783 480 30 163 890 140 880 7.25e-46 179
Msa0361780 MtrunA17_Chr3g0087541 25.547 959 593 39 2 906 13 904 9.90e-46 179
Msa0361780 MtrunA17_Chr8g0351821 28.942 463 289 14 6 460 9 439 1.25e-45 171
Msa0361780 MtrunA17_Chr3g0086091 26.995 752 427 28 201 885 2 698 2.42e-45 177
Msa0361780 MtrunA17_Chr3g0084031 25.096 781 466 28 61 789 69 782 5.13e-45 176
Msa0361780 MtrunA17_Chr4g0008461 26.114 808 493 28 191 939 159 921 1.45e-44 175
Msa0361780 MtrunA17_Chr3g0101171 67.593 108 34 1 427 534 5 111 4.32e-44 155
Msa0361780 MtrunA17_Chr8g0338251 24.522 628 414 17 21 632 28 611 1.12e-43 170
Msa0361780 MtrunA17_Chr3g0084051 25.766 881 551 34 61 901 67 884 1.48e-43 172
Msa0361780 MtrunA17_Chr5g0417301 26.332 657 377 20 5 644 8 574 1.81e-43 167
Msa0361780 MtrunA17_Chr8g0344071 30.943 488 283 16 164 632 444 896 3.20e-43 171
Msa0361780 MtrunA17_Chr3g0084081 25.030 827 521 30 35 821 40 807 3.35e-43 171
Msa0361780 MtrunA17_Chr5g0430331 28.145 469 273 15 3 452 6 429 6.46e-43 162
Msa0361780 MtrunA17_Chr3g0085551 25.175 715 445 24 125 801 7 669 6.62e-43 168
Msa0361780 MtrunA17_Chr6g0484551 24.969 805 464 35 31 792 44 751 1.75e-42 167
Msa0361780 MtrunA17_Chr3g0089431 26.211 454 284 12 30 465 43 463 3.53e-42 161
Msa0361780 MtrunA17_Chr3g0085801 24.535 807 483 26 30 800 41 757 4.77e-42 167
Msa0361780 MtrunA17_Chr6g0456131 24.143 729 467 19 21 726 27 692 1.10e-41 166
Msa0361780 MtrunA17_Chr8g0338361 25.820 488 331 13 157 632 21 489 1.26e-41 160
Msa0361780 MtrunA17_Chr2g0299101 24.931 726 441 24 35 720 40 701 1.64e-41 164
Msa0361780 MtrunA17_Chr3g0085521 23.523 931 587 34 13 893 16 871 2.54e-41 164
Msa0361780 MtrunA17_Chr2g0299121 25.215 932 550 38 35 893 40 897 2.73e-41 164
Msa0361780 MtrunA17_Chr3g0078361 28.027 446 273 16 197 611 1 429 8.21e-41 156
Msa0361780 MtrunA17_Chr3g0086741 23.643 829 507 28 35 801 42 806 1.06e-40 162
Msa0361780 MtrunA17_Chr3g0085751 24.172 906 570 34 35 893 39 874 2.00e-40 162
Msa0361780 MtrunA17_Chr6g0456121 26.020 711 422 31 165 838 151 794 2.79e-40 161
Msa0361780 MtrunA17_Chr3g0083751 25.213 940 546 38 31 894 45 903 3.27e-40 161
Msa0361780 MtrunA17_Chr3g0084811 23.498 932 580 33 33 896 194 1060 7.88e-40 160
Msa0361780 MtrunA17_Chr3g0091011 24.111 900 558 33 35 893 43 858 9.16e-40 159
Msa0361780 MtrunA17_Chr3g0082321 24.495 792 444 29 35 789 47 721 1.09e-39 158
Msa0361780 MtrunA17_Chr8g0356251 24.739 861 532 34 97 895 114 920 2.04e-39 159
Msa0361780 MtrunA17_Chr4g0071021 25.417 480 295 13 3 469 6 435 3.31e-39 151
Msa0361780 MtrunA17_Chr3g0085111 24.757 925 556 35 26 893 34 875 7.78e-39 157
Msa0361780 MtrunA17_Chr3g0083721 23.815 865 528 34 63 875 30 815 8.27e-39 156
Msa0361780 MtrunA17_Chr3g0085131 24.417 901 564 34 35 893 43 868 9.42e-39 156
Msa0361780 MtrunA17_Chr3g0113781 25.931 671 401 25 218 850 3 615 9.84e-39 155
Msa0361780 MtrunA17_Chr8g0352211 24.603 630 428 17 23 638 1030 1626 1.55e-38 156
Msa0361780 MtrunA17_Chr5g0413811 25.575 739 418 26 223 911 1 657 3.19e-38 152
Msa0361780 MtrunA17_Chr3g0087731 26.509 762 468 29 201 900 2 733 3.63e-38 154
Msa0361780 MtrunA17_Chr3g0080871 25.665 752 474 24 163 875 154 859 6.41e-38 154
Msa0361780 MtrunA17_Chr5g0414291 27.119 413 263 11 3 400 6 395 7.02e-38 147
Msa0361780 MtrunA17_Chr3g0085091 24.723 902 574 35 35 893 43 882 3.17e-37 151
Msa0361780 MtrunA17_Chr5g0430901 26.914 405 253 10 3 394 6 380 9.65e-37 149
Msa0361780 MtrunA17_Chr3g0085161 25.349 789 463 32 159 893 24 740 1.65e-36 149
Msa0361780 MtrunA17_Chr4g0048471 27.083 528 324 21 191 677 48 555 1.97e-36 148
Msa0361780 MtrunA17_Chr6g0469991 29.639 388 239 13 6 386 9 369 3.01e-36 141
Msa0361780 MtrunA17_Chr7g0257551 28.608 388 241 11 108 476 40 410 4.97e-36 142
Msa0361780 MtrunA17_Chr5g0417251 26.377 690 394 32 259 899 19 643 1.51e-35 144
Msa0361780 MtrunA17_Chr3g0087301 24.063 827 504 34 2 789 5 746 1.17e-34 143
Msa0361780 MtrunA17_Chr5g0415551 24.644 702 425 25 163 821 27 667 5.46e-34 140
Msa0361780 MtrunA17_Chr1g0189261 69.663 89 26 1 1 89 4 91 6.28e-34 125
Msa0361780 MtrunA17_Chr2g0309151 27.163 497 301 17 223 700 1 455 8.24e-34 136
Msa0361780 MtrunA17_Chr1g0159111 25.482 467 310 14 191 632 174 627 4.40e-33 138
Msa0361780 MtrunA17_Chr6g0468401 26.761 355 227 10 3 350 6 334 8.27e-33 130
Msa0361780 MtrunA17_Chr3g0084361 37.083 240 145 4 687 921 1 239 6.20e-32 125
Msa0361780 MtrunA17_Chr7g0248411 29.452 292 176 9 105 384 47 320 3.09e-31 125
Msa0361780 MtrunA17_Chr8g0355071 30.035 283 171 8 213 486 29 293 4.40e-31 124
Msa0361780 MtrunA17_Chr3g0083591 25.820 732 453 30 185 875 155 837 2.47e-30 129
Msa0361780 MtrunA17_Chr1g0197191 28.657 335 203 11 62 388 22 328 2.76e-30 122
Msa0361780 MtrunA17_Chr3g0085171 24.035 907 566 35 35 893 36 867 3.97e-30 129
Msa0361780 MtrunA17_Chr1g0189311 67.500 80 26 0 197 276 1 80 4.53e-30 114
Msa0361780 MtrunA17_Chr6g0478721 23.866 595 388 19 191 752 91 653 5.04e-30 128
Msa0361780 MtrunA17_Chr3g0084061 23.891 879 568 33 61 897 67 886 8.07e-30 128
Msa0361780 MtrunA17_Chr4g0010491 26.157 432 255 17 33 443 36 424 1.84e-29 122
Msa0361780 MtrunA17_Chr1g0169941 32.955 264 161 8 250 508 25 277 2.97e-29 120
Msa0361780 MtrunA17_Chr4g0048421 24.223 611 378 22 191 756 173 743 5.97e-29 124
Msa0361780 MtrunA17_Chr3g0091971 25.000 804 461 35 157 915 136 842 1.17e-28 124
Msa0361780 MtrunA17_Chr1g0168901 26.351 592 327 18 191 758 171 677 2.97e-28 122
Msa0361780 MtrunA17_Chr3g0101411 75.000 76 18 1 1 76 4 78 5.84e-28 107
Msa0361780 MtrunA17_Chr2g0308491 30.000 270 158 7 184 443 10 258 2.80e-27 112
Msa0361780 MtrunA17_Chr3g0081201 35.377 212 131 3 723 928 2 213 5.79e-27 110
Msa0361780 MtrunA17_Chr5g0414171 24.470 519 274 15 2 505 5 420 1.54e-26 113
Msa0361780 MtrunA17_Chr1g0197181 26.357 516 309 18 428 892 2 497 1.99e-26 114
Msa0361780 MtrunA17_Chr2g0299131 31.646 237 132 6 165 387 2 222 4.69e-26 107
Msa0361780 MtrunA17_Chr3g0083641 23.704 810 489 35 145 893 129 870 1.73e-24 110
Msa0361780 MtrunA17_Chr6g0468191 31.140 228 135 8 3 225 6 216 2.68e-24 103
Msa0361780 MtrunA17_Chr5g0415491 29.310 232 139 6 149 370 5 221 2.76e-24 102
Msa0361780 MtrunA17_Chr3g0082381 25.392 319 195 10 30 333 42 332 2.92e-24 105
Msa0361780 MtrunA17_Chr8g0338861 27.035 344 237 8 304 643 7 340 8.01e-24 107
Msa0361780 MtrunA17_Chr5g0416571 24.538 379 219 10 3 368 6 330 1.05e-23 103
Msa0361780 MtrunA17_Chr8g0338681 28.571 252 166 6 223 472 1 240 5.40e-23 99.4
Msa0361780 MtrunA17_Chr8g0392521 29.843 191 125 3 163 347 131 318 8.59e-23 100
Msa0361780 MtrunA17_Chr3g0085701 28.704 324 190 10 163 470 150 448 1.69e-22 104
Msa0361780 MtrunA17_Chr7g0257251 39.506 162 87 5 330 486 10 165 9.74e-22 93.6
Msa0361780 MtrunA17_Chr5g0443761 28.906 512 281 20 196 677 38 496 1.55e-21 101
Msa0361780 MtrunA17_Chr6g0468141 26.027 292 164 9 105 387 3 251 1.58e-21 95.5
Msa0361780 MtrunA17_Chr2g0299141 25.926 405 240 14 326 705 33 402 1.74e-21 98.6
Msa0361780 MtrunA17_Chr2g0282981 22.865 363 245 9 31 384 44 380 1.96e-21 98.2
Msa0361780 MtrunA17_Chr6g0468111 23.895 611 339 18 115 710 1 500 2.13e-21 99.0
Msa0361780 MtrunA17_Chr3g0083681 23.506 753 461 30 191 893 182 869 3.07e-21 100
Msa0361780 MtrunA17_Chr3g0091121 25.933 536 327 21 413 911 19 521 6.14e-21 98.6
Msa0361780 MtrunA17_Chr2g0313481 23.275 739 473 28 191 901 174 846 1.35e-20 98.6
Msa0361780 MtrunA17_Chr3g0105571 27.606 355 218 12 167 508 94 422 3.03e-20 95.9
Msa0361780 MtrunA17_Chr3g0085721 27.937 315 196 10 87 384 54 354 1.28e-19 92.0
Msa0361780 MtrunA17_Chr5g0410401 22.830 749 403 27 190 856 45 700 1.43e-19 94.4
Msa0361780 MtrunA17_Chr5g0444291 49.438 89 25 1 282 350 8 96 1.88e-19 84.3
Msa0361780 MtrunA17_Chr1g0153981 25.410 366 221 14 169 517 184 514 2.50e-19 93.6
Msa0361780 MtrunA17_Chr1g0189331 45.946 111 52 3 694 798 1 109 2.51e-19 84.3
Msa0361780 MtrunA17_Chr8g0360991 26.415 371 234 14 187 549 169 508 2.97e-19 94.0
Msa0361780 MtrunA17_Chr7g0256881 23.976 659 380 23 167 756 186 792 3.41e-19 94.0
Msa0361780 MtrunA17_Chr3g0086071 26.316 513 312 22 414 893 11 490 4.49e-19 92.4
Msa0361780 MtrunA17_Chr3g0082371 26.606 436 239 18 378 789 1 379 7.69e-19 90.9
Msa0361780 MtrunA17_Chr6g0470001 26.613 496 293 23 417 883 3 456 1.37e-18 91.3
Msa0361780 MtrunA17_Chr5g0439121 27.020 396 242 17 131 508 106 472 3.49e-18 90.5
Msa0361780 MtrunA17_Chr3g0101161 37.374 198 102 5 737 923 2 188 3.72e-18 83.6
Msa0361780 MtrunA17_Chr3g0105551 24.131 518 329 18 2 508 4 468 7.10e-18 89.7
Msa0361780 MtrunA17_Chr5g0410261 23.132 562 304 21 365 887 358 830 3.49e-17 87.0
Msa0361780 MtrunA17_Chr6g0468201 28.571 399 223 17 418 799 4 357 4.90e-17 86.3
Msa0361780 MtrunA17_Chr2g0313491 23.483 758 446 29 191 901 174 844 8.41e-17 85.9
Msa0361780 MtrunA17_Chr3g0108811 25.797 345 220 12 172 507 163 480 1.24e-16 85.5
Msa0361780 MtrunA17_Chr7g0255111 26.801 347 215 14 176 511 166 484 2.37e-16 84.7
Msa0361780 MtrunA17_Chr5g0410481 22.673 666 367 25 122 734 91 661 2.42e-16 84.3
Msa0361780 MtrunA17_Chr5g0413821 25.214 234 138 8 3 218 6 220 2.71e-16 79.0
Msa0361780 MtrunA17_Chr3g0091961 25.693 397 235 18 323 702 3 356 3.54e-16 82.0
Msa0361780 MtrunA17_Chr3g0100261 29.326 341 184 17 191 510 173 477 3.71e-16 84.0
Msa0361780 MtrunA17_Chr7g0229721 23.457 486 326 16 167 632 142 601 6.61e-16 82.8
Msa0361780 MtrunA17_Chr6g0454831 25.546 595 319 28 169 700 186 719 8.65e-16 82.4
Msa0361780 MtrunA17_Chr4g0009241 26.370 584 303 30 183 700 740 1262 8.90e-16 82.8
Msa0361780 MtrunA17_Chr7g0229751 23.602 483 324 17 169 632 97 553 9.97e-16 82.0
Msa0361780 MtrunA17_Chr4g0009141 23.906 640 370 30 183 758 718 1304 9.99e-16 82.4
Msa0361780 MtrunA17_Chr5g0402771 28.909 339 195 20 164 487 157 464 1.39e-15 81.6
Msa0361780 MtrunA17_Chr2g0299841 28.448 348 199 15 169 508 233 538 1.55e-15 81.6
Msa0361780 MtrunA17_Chr1g0146241 28.274 336 195 14 192 510 180 486 3.06e-15 80.9
Msa0361780 MtrunA17_Chr3g0085421 28.723 188 114 6 138 316 66 242 3.23e-15 76.6
Msa0361780 MtrunA17_Chr3g0085431 27.178 287 178 9 370 636 2 277 3.78e-15 79.3
Msa0361780 MtrunA17_Chr3g0108821 26.074 326 207 11 191 507 168 468 3.98e-15 80.5
Msa0361780 MtrunA17_Chr7g0221071 24.573 468 289 19 191 632 96 525 4.49e-15 79.7
Msa0361780 MtrunA17_Chr4g0005891 25.882 595 318 29 169 700 226 760 6.82e-15 79.7
Msa0361780 MtrunA17_Chr8g0374301 23.586 619 412 26 168 754 172 761 7.04e-15 79.3
Msa0361780 MtrunA17_Chr5g0420331 24.837 612 360 25 169 730 187 748 7.79e-15 79.3
Msa0361780 MtrunA17_Chr3g0108791 26.032 315 209 10 197 507 1 295 8.16e-15 78.2
Msa0361780 MtrunA17_Chr5g0402671 26.888 331 203 16 164 487 159 457 8.49e-15 79.0
Msa0361780 MtrunA17_Chr2g0299791 28.530 347 200 16 169 508 192 497 8.97e-15 79.3
Msa0361780 MtrunA17_Chr3g0099591 23.702 578 348 23 156 700 138 655 9.12e-15 79.3
Msa0361780 MtrunA17_Chr4g0010711 25.797 659 363 31 169 760 696 1295 9.80e-15 79.3
Msa0361780 MtrunA17_Chr5g0410351 23.599 589 350 20 164 726 150 664 1.79e-14 78.2
Msa0361780 MtrunA17_Chr8g0350071 27.469 324 176 13 197 508 1 277 2.77e-14 75.5
Msa0361780 MtrunA17_Chr7g0221131 22.353 595 373 23 191 763 241 768 3.76e-14 77.0
Msa0361780 MtrunA17_Chr7g0255401 25.959 339 199 14 192 510 118 424 4.62e-14 77.0
Msa0361780 MtrunA17_Chr3g0107211 25.305 328 215 9 191 508 169 476 4.82e-14 77.0
Msa0361780 MtrunA17_Chr4g0005871 25.199 627 339 29 169 730 311 872 5.43e-14 76.6
Msa0361780 MtrunA17_Chr6g0468361 24.948 477 288 18 418 864 4 440 6.56e-14 75.5
Msa0361780 MtrunA17_Chr5g0414911 24.713 348 221 12 175 510 163 481 9.58e-14 76.3
Msa0361780 MtrunA17_Chr3g0108211 25.625 320 206 10 197 507 1 297 1.86e-13 73.6
Msa0361780 MtrunA17_Chr4g0005591 25.939 586 328 26 169 700 255 788 3.22e-13 74.3
Msa0361780 MtrunA17_Chr1g0189341 44.944 89 47 1 816 904 1 87 3.51e-13 67.0
Msa0361780 MtrunA17_Chr6g0479001 30.417 240 145 10 188 425 207 426 4.18e-13 73.9
Msa0361780 MtrunA17_Chr1g0160951 26.718 262 168 7 191 446 69 312 5.66e-13 73.6
Msa0361780 MtrunA17_Chr5g0402721 26.885 305 189 13 190 487 168 445 5.89e-13 73.2
Msa0361780 MtrunA17_Chr3g0108061 25.054 467 290 20 197 632 1 438 6.41e-13 72.8
Msa0361780 MtrunA17_Chr6g0470061 28.431 204 128 5 6 206 9 197 8.68e-13 68.2
Msa0361780 MtrunA17_Chr3g0108101 27.106 273 177 7 197 463 1 257 8.68e-13 69.7
Msa0361780 MtrunA17_Chr5g0420341 23.617 669 403 28 169 776 187 808 1.22e-12 72.4
Msa0361780 MtrunA17_Chr1g0189511 27.273 330 153 15 356 677 5 255 1.57e-12 68.9
Msa0361780 MtrunA17_Chr3g0105621 23.810 441 288 14 191 612 119 530 2.01e-12 70.9
Msa0361780 MtrunA17_Chr4g0020411 37.313 134 70 5 308 438 27 149 5.35e-12 64.7
Msa0361780 MtrunA17_Chr5g0417081 26.923 338 171 17 191 508 1 282 5.63e-12 68.9
Msa0361780 MtrunA17_Chr7g0257261 24.603 252 156 8 1 232 1 238 7.90e-12 67.0
Msa0361780 MtrunA17_Chr3g0102271 22.087 824 480 31 84 826 97 839 9.72e-12 69.3
Msa0361780 MtrunA17_Chr5g0415481 24.600 500 294 20 450 922 6 449 1.30e-11 68.2
Msa0361780 MtrunA17_Chr8g0339031 24.065 615 360 27 169 730 197 757 1.67e-11 68.6
Msa0361780 MtrunA17_Chr6g0454961 25.540 556 302 27 202 700 246 746 1.80e-11 68.6
Msa0361780 MtrunA17_Chr4g0009401 23.440 593 350 23 161 700 675 1216 2.18e-11 68.6
Msa0361780 MtrunA17_Chr2g0299811 26.590 346 208 16 169 508 39 344 2.98e-11 67.8
Msa0361780 MtrunA17_Chr6g0478741 30.328 244 142 12 187 425 206 426 3.00e-11 67.8
Msa0361780 MtrunA17_Chr6g0479051 30.453 243 135 12 191 425 189 405 3.62e-11 67.4
Msa0361780 MtrunA17_Chr4g0041931 28.000 275 179 8 167 439 198 455 4.31e-11 67.4
Msa0361780 MtrunA17_Chr3g0107621 25.128 390 249 16 187 559 164 527 7.04e-11 65.9
Msa0361780 MtrunA17_Chr3g0108011 25.152 330 200 14 191 507 204 499 7.14e-11 66.6
Msa0361780 MtrunA17_Chr1g0160871 31.333 150 87 5 656 793 3 148 7.40e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361780 AT3G07040.1 30.719 918 573 16 2 897 5 881 1.21e-120 390
Msa0361780 AT3G46530.1 28.894 886 532 27 5 873 8 812 1.31e-85 293
Msa0361780 AT3G46730.1 29.510 898 530 25 2 873 5 825 4.59e-82 283
Msa0361780 AT3G46710.1 28.555 893 542 26 5 873 8 828 1.20e-81 282
Msa0361780 AT5G48620.6 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT5G48620.1 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT5G48620.4 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT5G48620.2 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT5G48620.3 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT5G48620.5 27.047 965 601 27 3 927 6 907 2.10e-80 280
Msa0361780 AT1G59780.1 27.004 948 591 33 3 922 11 885 2.41e-79 277
Msa0361780 AT1G59780.2 27.004 948 591 33 3 922 6 880 3.86e-79 276
Msa0361780 AT5G43470.3 27.521 952 613 26 3 927 6 907 4.31e-79 276
Msa0361780 AT5G43470.2 27.521 952 613 26 3 927 6 907 4.31e-79 276
Msa0361780 AT5G43470.4 27.521 952 613 26 3 927 6 907 4.31e-79 276
Msa0361780 AT5G43470.1 27.521 952 613 26 3 927 6 907 4.31e-79 276
Msa0361780 AT5G35450.2 27.497 971 580 33 2 927 5 896 2.12e-78 275
Msa0361780 AT5G35450.1 27.497 971 580 33 2 927 5 896 2.12e-78 275
Msa0361780 AT1G58390.1 26.824 973 583 32 3 923 6 901 3.53e-78 274
Msa0361780 AT1G58390.2 26.824 973 583 32 3 923 6 901 3.53e-78 274
Msa0361780 AT1G53350.1 26.927 973 592 30 2 927 5 905 3.80e-78 274
Msa0361780 AT3G50950.2 27.038 736 472 19 2 713 5 699 2.32e-75 265
Msa0361780 AT3G50950.1 27.038 736 472 19 2 713 5 699 2.32e-75 265
Msa0361780 AT1G50180.1 31.804 654 388 19 3 632 6 625 6.57e-75 264
Msa0361780 AT1G58400.3 26.111 923 589 27 3 889 6 871 6.81e-74 262
Msa0361780 AT1G58400.2 26.111 923 589 27 3 889 6 871 6.81e-74 262
Msa0361780 AT1G58410.1 25.766 947 628 26 3 925 4 899 2.63e-73 260
Msa0361780 AT1G58410.4 25.766 947 628 26 3 925 4 899 2.63e-73 260
Msa0361780 AT1G58410.2 25.766 947 628 26 3 925 4 899 2.63e-73 260
Msa0361780 AT1G58400.1 26.111 923 579 27 3 889 6 861 5.54e-72 256
Msa0361780 AT1G59218.1 25.922 922 582 27 3 883 6 867 1.51e-68 248
Msa0361780 AT1G59218.2 25.922 922 582 27 3 883 6 867 1.51e-68 248
Msa0361780 AT1G59218.3 25.922 922 582 27 3 883 6 867 1.51e-68 248
Msa0361780 AT1G58848.1 25.922 922 582 27 3 883 6 867 1.51e-68 248
Msa0361780 AT1G58848.2 25.922 922 582 27 3 883 6 867 1.51e-68 248
Msa0361780 AT1G59124.2 26.002 923 572 29 3 883 6 859 4.69e-64 234
Msa0361780 AT1G58807.1 26.002 923 572 29 3 883 6 859 4.69e-64 234
Msa0361780 AT1G59124.1 25.958 913 565 29 3 873 6 849 1.43e-63 231
Msa0361780 AT1G58807.2 25.958 913 565 29 3 873 6 849 1.43e-63 231
Msa0361780 AT1G58602.2 25.274 914 596 26 3 883 6 865 6.48e-61 226
Msa0361780 AT1G58602.1 25.274 914 596 26 3 883 6 865 6.48e-61 226
Msa0361780 AT1G58410.3 24.550 945 610 26 3 925 4 867 2.94e-59 219
Msa0361780 AT1G59620.2 26.048 787 483 27 165 923 24 739 1.13e-57 212
Msa0361780 AT3G14470.1 26.190 756 458 31 31 752 42 731 1.30e-52 200
Msa0361780 AT3G14470.2 26.190 756 458 31 31 752 42 731 1.30e-52 200
Msa0361780 AT1G10920.1 27.151 744 461 25 133 843 5 700 1.30e-51 194
Msa0361780 AT1G10920.2 27.151 744 461 25 133 843 5 700 1.30e-51 194
Msa0361780 AT1G10920.4 27.151 744 461 25 133 843 5 700 1.30e-51 194
Msa0361780 AT3G14460.1 25.138 907 571 30 31 886 39 888 1.55e-51 197
Msa0361780 AT1G12220.3 25.338 517 323 17 191 700 57 517 1.63e-31 133
Msa0361780 AT1G12220.1 25.145 517 324 17 191 700 178 638 2.17e-31 133
Msa0361780 AT1G12220.2 25.145 517 324 17 191 700 178 638 2.17e-31 133
Msa0361780 AT4G10780.2 27.745 501 301 22 167 631 136 611 4.30e-31 132
Msa0361780 AT4G10780.1 27.745 501 301 22 167 631 136 611 4.33e-31 132
Msa0361780 AT1G15890.1 29.945 364 220 15 156 510 145 482 4.56e-31 132
Msa0361780 AT1G15890.2 30.383 339 205 13 181 510 6 322 5.84e-31 130
Msa0361780 AT5G63020.1 27.009 448 282 17 181 608 166 588 2.79e-30 129
Msa0361780 AT1G63350.4 24.583 720 420 28 191 883 174 797 3.09e-29 126
Msa0361780 AT5G47250.1 25.932 590 344 23 167 739 156 669 9.96e-29 124
Msa0361780 AT1G51480.1 25.126 593 340 24 181 760 165 666 1.52e-28 124
Msa0361780 AT1G10920.5 26.519 543 329 21 333 843 26 530 1.60e-28 122
Msa0361780 AT1G10920.3 26.519 543 329 21 333 843 26 530 1.60e-28 122
Msa0361780 AT1G12210.3 25.771 551 338 20 163 701 106 597 1.86e-28 123
Msa0361780 AT1G12210.2 25.771 551 338 20 163 701 106 597 1.86e-28 123
Msa0361780 AT1G12210.1 25.771 551 338 20 163 701 148 639 2.30e-28 123
Msa0361780 AT1G63350.3 27.273 462 296 19 191 632 174 615 1.15e-27 121
Msa0361780 AT1G63350.2 27.273 462 296 19 191 632 174 615 1.15e-27 121
Msa0361780 AT1G63350.1 27.273 462 296 19 191 632 174 615 1.30e-27 120
Msa0361780 AT5G43730.4 27.133 457 282 18 179 611 162 591 5.20e-27 119
Msa0361780 AT5G43730.1 27.133 457 282 18 179 611 162 591 5.20e-27 119
Msa0361780 AT5G43730.3 27.133 457 282 18 179 611 162 591 5.20e-27 119
Msa0361780 AT5G43730.2 27.133 457 282 18 179 611 162 591 5.20e-27 119
Msa0361780 AT5G43730.5 27.133 457 282 18 179 611 162 591 5.20e-27 119
Msa0361780 AT1G61190.2 27.646 463 294 20 191 633 175 616 5.35e-27 119
Msa0361780 AT1G61190.3 27.646 463 294 20 191 633 175 616 5.35e-27 119
Msa0361780 AT1G61310.1 26.778 478 299 21 191 640 176 630 7.12e-27 118
Msa0361780 AT1G12280.1 25.562 489 318 18 165 632 154 617 1.21e-26 117
Msa0361780 AT1G61190.1 27.742 465 291 21 191 633 175 616 1.39e-26 117
Msa0361780 AT5G43740.1 27.193 456 280 19 181 611 163 591 2.27e-26 117
Msa0361780 AT5G43740.2 27.193 456 280 19 181 611 163 591 2.27e-26 117
Msa0361780 AT1G61190.4 27.111 450 288 18 191 633 175 591 2.27e-26 117
Msa0361780 AT1G61180.1 27.964 329 206 10 191 510 174 480 3.36e-25 113
Msa0361780 AT1G61180.2 27.964 329 206 10 191 510 174 480 3.71e-25 113
Msa0361780 AT4G27220.2 24.513 616 357 23 192 776 145 683 6.94e-25 112
Msa0361780 AT1G62630.1 24.267 750 406 32 202 902 185 821 6.95e-25 112
Msa0361780 AT4G27220.1 25.408 551 316 22 192 711 137 623 8.60e-25 112
Msa0361780 AT1G12290.4 26.535 456 287 20 89 516 16 451 1.73e-24 110
Msa0361780 AT1G12290.3 26.535 456 287 20 89 516 16 451 1.73e-24 110
Msa0361780 AT1G12290.2 26.535 456 287 20 89 516 16 451 1.73e-24 110
Msa0361780 AT1G12290.1 26.337 486 308 21 59 516 30 493 1.77e-24 110
Msa0361780 AT1G61300.2 29.032 279 180 8 191 464 63 328 2.62e-24 110
Msa0361780 AT1G61300.1 29.032 279 180 8 191 464 63 328 2.77e-24 110
Msa0361780 AT5G05400.2 27.160 324 204 13 191 510 8 303 3.30e-24 109
Msa0361780 AT5G05400.3 27.160 324 204 13 191 510 8 303 3.30e-24 109
Msa0361780 AT4G26090.1 23.918 485 321 17 168 632 155 611 3.63e-24 110
Msa0361780 AT5G05400.1 27.160 324 204 13 191 510 177 472 8.08e-24 108
Msa0361780 AT1G63360.2 27.391 460 273 21 202 627 150 582 2.05e-23 107
Msa0361780 AT1G63360.1 27.391 460 273 21 202 627 185 617 2.64e-23 107
Msa0361780 AT4G27190.1 24.104 614 362 23 192 776 167 705 1.45e-22 104
Msa0361780 AT1G27170.1 24.177 790 451 34 168 886 189 901 2.10e-19 94.7
Msa0361780 AT1G27170.2 24.177 790 451 34 168 886 189 901 2.97e-19 94.4
Msa0361780 AT1G12280.2 23.361 488 297 19 165 632 116 546 1.86e-17 88.2
Msa0361780 AT1G27180.3 24.208 789 470 32 156 873 193 924 9.27e-16 82.8
Msa0361780 AT1G27180.2 24.208 789 470 32 156 873 193 924 1.73e-15 82.0
Msa0361780 AT5G47260.1 22.481 516 330 21 10 510 12 472 1.78e-15 82.0
Msa0361780 AT1G27180.5 24.208 789 470 32 156 873 191 922 1.79e-15 82.0
Msa0361780 AT1G27180.8 24.208 789 470 32 156 873 191 922 1.79e-15 82.0
Msa0361780 AT1G27180.1 24.208 789 470 32 156 873 355 1086 2.01e-15 82.0
Msa0361780 AT1G27180.7 24.208 789 470 32 156 873 17 748 3.28e-15 81.3
Msa0361780 AT1G27180.6 24.208 789 470 32 156 873 17 748 3.28e-15 81.3
Msa0361780 AT1G27180.4 24.208 789 470 32 156 873 17 748 3.28e-15 81.3
Msa0361780 AT4G33300.2 26.542 373 209 16 169 527 182 503 6.54e-15 80.1
Msa0361780 AT4G33300.1 26.542 373 209 16 169 527 182 503 6.54e-15 80.1
Msa0361780 AT5G66900.1 23.381 633 391 31 168 754 168 752 3.48e-14 77.4
Msa0361780 AT5G66900.2 23.381 633 391 31 168 754 216 800 4.39e-14 77.4
Msa0361780 AT4G36140.2 31.579 190 111 7 192 377 420 594 8.47e-12 70.1
Msa0361780 AT4G36140.1 31.579 190 111 7 192 377 605 779 1.02e-11 69.7
Msa0361780 AT5G17680.2 23.475 754 445 34 191 904 209 870 1.82e-11 68.9
Msa0361780 AT5G17680.1 23.475 754 445 34 191 904 208 869 3.32e-11 68.2

Find 201 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACAATATTCCTAAGAATT+TGG 0.118881 3_1:-52448861 Msa0361780:CDS
TATATTAGGGGTGCGGAATT+TGG 0.142079 3_1:-52447945 Msa0361780:CDS
ACTGTCTTTGATTGAATTAA+AGG 0.169296 3_1:-52448588 Msa0361780:CDS
AAAGATTGTTCTGGAGTTAA+AGG 0.174440 3_1:+52449637 None:intergenic
TGGAGCATGCCAATGGATTT+AGG 0.174719 3_1:+52448779 None:intergenic
ATAAGGCATCTTTGGATATT+AGG 0.187464 3_1:-52448724 Msa0361780:CDS
AATAACAATTACAAACAATT+TGG 0.193578 3_1:+52447530 None:intergenic
ATGAAATTTCCCAAATTCTT+AGG 0.236391 3_1:+52448851 None:intergenic
TCCAAAGATGCCTTATAATA+TGG 0.247309 3_1:+52448731 None:intergenic
AAGTCATGCTTGTTGTATTT+TGG 0.259158 3_1:-52449343 Msa0361780:CDS
AGCTTGAATATCTCTATATT+AGG 0.260773 3_1:-52447959 Msa0361780:CDS
TTTAACTCCAGAACAATCTT+TGG 0.262589 3_1:-52449635 Msa0361780:CDS
TCCATATTATAAGGCATCTT+TGG 0.266153 3_1:-52448732 Msa0361780:CDS
ATATTAGGGGTGCGGAATTT+GGG 0.272351 3_1:-52447944 Msa0361780:CDS
AGGTCATTTACTTTCTGTTT+TGG 0.274340 3_1:-52447468 Msa0361780:three_prime_UTR
GGTTCTATGTCCATATTATA+AGG 0.276588 3_1:-52448741 Msa0361780:CDS
GATTTAACTTCAAAATCTTC+TGG 0.281703 3_1:+52449313 None:intergenic
GACAATATTCCTAAGAATTT+GGG 0.281962 3_1:-52448860 Msa0361780:CDS
TGAAGATCTAACATCCATTC+TGG 0.282119 3_1:+52448275 None:intergenic
CCAGGGAAGGAGTCAAAATA+TGG 0.290511 3_1:-52450461 Msa0361780:CDS
GTTGGTGTTCATAAGGAAAA+TGG 0.292088 3_1:-52448446 Msa0361780:CDS
ATATTAGGAGACATATTATT+AGG 0.301285 3_1:-52448709 Msa0361780:CDS
GCTGCAATTGATTGTAATAA+TGG 0.318195 3_1:-52449745 Msa0361780:CDS
GGAGCATGCCAATGGATTTA+GGG 0.320075 3_1:+52448780 None:intergenic
CCAACTACTTCCAGTGTTAA+GGG 0.335085 3_1:-52450607 Msa0361780:CDS
GCTTGAATATCTCTATATTA+GGG 0.338015 3_1:-52447958 Msa0361780:CDS
GCTATACCAATGAGCTCATT+TGG 0.338997 3_1:+52449565 None:intergenic
CACTCGAGGGTCGTGCCATT+TGG 0.344281 3_1:+52450179 None:intergenic
ACCAACTACTTCCAGTGTTA+AGG 0.346055 3_1:-52450608 Msa0361780:CDS
AGGAGGGTTTCAGAAATTAA+AGG 0.351594 3_1:-52448117 Msa0361780:CDS
CTAAGCTTCCTAATCTCCTT+TGG 0.357553 3_1:+52448638 None:intergenic
GTATCCTCGCTTAAAATTGA+TGG 0.359727 3_1:-52449172 Msa0361780:CDS
AACAACTCCAAAGATTGTTC+TGG 0.362715 3_1:+52449628 None:intergenic
ATTGAATTAAAGGATGGTAT+TGG 0.366172 3_1:-52448578 Msa0361780:CDS
AGTAAATGACCTTAACAATA+AGG 0.367698 3_1:+52447479 None:intergenic
GGAGGAAAAGGGAAAGACTA+TGG 0.373290 3_1:-52449248 Msa0361780:CDS
TGCAAGCATATTAGTGATGA+TGG 0.379871 3_1:-52449076 Msa0361780:CDS
TTGTCGTATTTGATGATGTT+TGG 0.380392 3_1:-52449798 Msa0361780:CDS
TTCAATAACCTGTACTTTGT+AGG 0.383139 3_1:+52448911 None:intergenic
TACAAACTCTGCGTGATGTT+TGG 0.389634 3_1:-52448541 Msa0361780:CDS
TTTGGAGTTGTTCAATAAGA+AGG 0.390993 3_1:-52449617 Msa0361780:CDS
CAAGACAAAGATTGATTGAT+TGG 0.391240 3_1:-52450110 Msa0361780:CDS
GAGGTTGGTTGGTGTTCATA+AGG 0.391661 3_1:-52448453 Msa0361780:CDS
GAACCAAGGTCTCTAGGTTC+TGG 0.395077 3_1:+52448759 None:intergenic
TGAAGGAGATAAGGGATTTG+AGG 0.401826 3_1:-52448472 Msa0361780:CDS
TTGAGTTGCCAAAGGAGATT+AGG 0.403755 3_1:-52448646 Msa0361780:CDS
AAATATGGGTGAAGCAACTT+AGG 0.404547 3_1:-52450446 Msa0361780:CDS
CGCAGAGATTAAAGATGAAC+TGG 0.407152 3_1:-52450547 Msa0361780:CDS
TTGATTGATTGGATGGTAAA+GGG 0.410347 3_1:-52450099 Msa0361780:CDS
TTTGACAGCAAGGATATCAT+TGG 0.412455 3_1:-52450003 Msa0361780:CDS
ATTGATTGATTGGATGGTAA+AGG 0.425910 3_1:-52450100 Msa0361780:CDS
ATTGTGAGACCTTATTGTTA+AGG 0.429264 3_1:-52447488 Msa0361780:three_prime_UTR
GATGTTTGGTTAGATATGAA+TGG 0.429686 3_1:-52448527 Msa0361780:CDS
GACACTTTGATTGTCGTGTA+TGG 0.430001 3_1:-52449981 Msa0361780:CDS
ACTTGAAGTATTTAAGCATC+AGG 0.430125 3_1:-52448826 Msa0361780:CDS
AATGGATCTTTATCTGAATA+CGG 0.432719 3_1:+52448224 None:intergenic
GTTCTACTGAGGATTGGAAT+TGG 0.436273 3_1:-52447914 Msa0361780:CDS
AAAATTGATGGCAAAGCTAA+AGG 0.439169 3_1:-52449160 Msa0361780:CDS
GAAAGCTAAGACATCTTATC+GGG 0.440117 3_1:-52448616 Msa0361780:CDS
GGAGATAAGGGATTTGAGGT+TGG 0.441802 3_1:-52448468 Msa0361780:CDS
GTACAAATTCATTCTAATGA+TGG 0.443460 3_1:-52447870 Msa0361780:CDS
CTCGAGGTTGTTGTGCTACC+AGG 0.443980 3_1:+52450379 None:intergenic
GCGCCGCACTATTCCACTTA+AGG 0.445363 3_1:+52449045 None:intergenic
AGGGTTTGTGAAGGAGGAAA+AGG 0.445462 3_1:-52449260 Msa0361780:CDS
CGTCACTGGTTGTTGCTGAT+AGG 0.451050 3_1:+52449023 None:intergenic
TCCCGAGGGTATTTCTCAAA+TGG 0.453366 3_1:-52449875 Msa0361780:CDS
TCTTCAAAATCTTACTGTGT+TGG 0.454583 3_1:-52448258 Msa0361780:CDS
TGAAAACTCTTAGTTTAATG+AGG 0.455503 3_1:-52448028 Msa0361780:CDS
GCAGAGGTAATTAAAGCGTT+AGG 0.455821 3_1:-52448500 Msa0361780:CDS
AAGACAGATACACATCTGAT+TGG 0.455822 3_1:-52449415 Msa0361780:CDS
AAGCATGACTTCAGATAGTA+AGG 0.456706 3_1:+52449355 None:intergenic
AGCTGAAGGGTTTGTGAAGG+AGG 0.457944 3_1:-52449266 Msa0361780:CDS
CATTAGAATGAATTTGTACA+AGG 0.458019 3_1:+52447874 None:intergenic
CCCTTAACACTGGAAGTAGT+TGG 0.458147 3_1:+52450607 None:intergenic
AAACATCACGCAGAGTTTGT+AGG 0.470081 3_1:+52448543 None:intergenic
TCAATAACCTGTACTTTGTA+GGG 0.471250 3_1:+52448912 None:intergenic
CAATCAATCAATCTTTGTCT+TGG 0.473521 3_1:+52450111 None:intergenic
ACAAAGATTGATTGATTGGA+TGG 0.474912 3_1:-52450106 Msa0361780:CDS
AGAAAGCTAAGACATCTTAT+CGG 0.477413 3_1:-52448617 Msa0361780:CDS
GTCGAGGAAGCTGAGGTTGT+GGG 0.477532 3_1:-52450144 Msa0361780:CDS
TGTGGTGTCTGTGGTAGGAA+TGG 0.478105 3_1:-52450061 Msa0361780:CDS
CGTCGAGGAAGCTGAGGTTG+TGG 0.481371 3_1:-52450145 Msa0361780:CDS
AGGAAAGCTGAAGGAGATAA+GGG 0.481388 3_1:-52448480 Msa0361780:CDS
ACAGAAAGAAGTGAAAGATA+TGG 0.484511 3_1:-52450255 Msa0361780:CDS
GTGTCTGTGGTAGGAATGGG+AGG 0.490440 3_1:-52450057 Msa0361780:CDS
TAGGAAAGCTGAAGGAGATA+AGG 0.492991 3_1:-52448481 Msa0361780:CDS
GAGCTGAAGGAGACAACACC+AGG 0.494315 3_1:-52450479 Msa0361780:CDS
ACCCACTGGCATCCAACACT+TGG 0.495549 3_1:-52447985 Msa0361780:CDS
GGGTTTGTGAAGGAGGAAAA+GGG 0.495805 3_1:-52449259 Msa0361780:CDS
GTGGTGTCTGTGGTAGGAAT+GGG 0.496592 3_1:-52450060 Msa0361780:CDS
GTGTTGCATTTCATTGATTG+AGG 0.497234 3_1:+52448409 None:intergenic
ATAAGGGATTTGAGGTTGGT+TGG 0.498372 3_1:-52448464 Msa0361780:CDS
GTAAACCTTCATAATTACTA+AGG 0.498465 3_1:+52448156 None:intergenic
GCACAACAACCTCGAGATCA+TGG 0.504294 3_1:-52450372 Msa0361780:CDS
ATTCAAGCTTCTCCAAGTGT+TGG 0.507891 3_1:+52447973 None:intergenic
CCGCTAGCAATTGTTGCCAT+CGG 0.508345 3_1:-52449511 Msa0361780:CDS
AATATGGGTGAAGCAACTTA+GGG 0.508933 3_1:-52450445 Msa0361780:CDS
CATTGATGAATATTTGATCC+TGG 0.509741 3_1:-52450397 Msa0361780:CDS
GACTATGGAAGAAGTAGCAG+AGG 0.512062 3_1:-52449233 Msa0361780:CDS
TACAAAGTACAGGTTATTGA+AGG 0.512744 3_1:-52448909 Msa0361780:CDS
GATGCTGATAAAAGAGCAGC+AGG 0.512910 3_1:-52450501 Msa0361780:CDS
GGGTATTTCTCAAATGGATC+GGG 0.513930 3_1:-52449869 Msa0361780:CDS
AGACAGATACACATCTGATT+GGG 0.516477 3_1:-52449414 Msa0361780:CDS
AGCGCAGTTCTACTGAGGAT+TGG 0.516972 3_1:-52447920 Msa0361780:CDS
GTGGTAGGAATGGGAGGGCA+AGG 0.522675 3_1:-52450051 Msa0361780:CDS
GTGTGATCGTTCTTTAACAT+TGG 0.525929 3_1:-52447565 Msa0361780:three_prime_UTR
TTAGACCTTAGTAATTATGA+AGG 0.526114 3_1:-52448161 Msa0361780:CDS
AACATCACGCAGAGTTTGTA+GGG 0.528292 3_1:+52448544 None:intergenic
TGATGCTTAAATACTTCAAG+TGG 0.530692 3_1:+52448828 None:intergenic
TGTAGGGATTCCACTGTCAA+AGG 0.532831 3_1:+52448928 None:intergenic
AAAAGAGCAGCAGGAGCTGA+AGG 0.534231 3_1:-52450492 Msa0361780:CDS
CTCCAAGTGTTGGATGCCAG+TGG 0.536576 3_1:+52447983 None:intergenic
TTGATTGTAATAATGGAAGT+AGG 0.537234 3_1:-52449738 Msa0361780:CDS
GTTGAAGTCCCTAAATCCAT+TGG 0.538425 3_1:-52448788 Msa0361780:CDS
GCATTCACAATTGATTGTGA+TGG 0.540956 3_1:-52449595 Msa0361780:CDS
AGAGTTGATTCATAGAAGCC+TGG 0.542183 3_1:-52449200 Msa0361780:CDS
TGCAACACTTGTTGATCTTG+TGG 0.542520 3_1:-52448184 Msa0361780:CDS
CAAGAAATTCTAGAGGAAGC+AGG 0.550076 3_1:-52450206 Msa0361780:CDS
GACATAGAACCAAGGTCTCT+AGG 0.551692 3_1:+52448753 None:intergenic
TTGATTGGATGGTAAAGGGA+AGG 0.551937 3_1:-52450095 Msa0361780:CDS
GAGGAAGCAGGAATGCCAAA+TGG 0.552792 3_1:-52450194 Msa0361780:CDS
CAGTGTTAAGGGAAGAAGCC+AGG 0.555710 3_1:-52450596 Msa0361780:CDS
TCTTTGATTGAATTAAAGGA+TGG 0.556058 3_1:-52448584 Msa0361780:CDS
TGAGGATTGGAATTGGATCA+TGG 0.556648 3_1:-52447907 Msa0361780:CDS
TTTCTTGTTCAAAAGAACGT+TGG 0.558196 3_1:+52450229 None:intergenic
AGGGTATTTCTCAAATGGAT+CGG 0.558807 3_1:-52449870 Msa0361780:CDS
AGATATGAATGGAGGAGCAG+AGG 0.559307 3_1:-52448516 Msa0361780:CDS
GTATTGACGGATCTCATGTT+CGG 0.559551 3_1:-52448985 Msa0361780:CDS
GACTTCAAGTTCAAGTGCGA+TGG 0.560463 3_1:-52447646 Msa0361780:CDS
ATTCAACAATGGATAGCTGA+AGG 0.561281 3_1:-52449280 Msa0361780:CDS
GAAGGAGACAACACCAGGGA+AGG 0.568185 3_1:-52450474 Msa0361780:CDS
CTAGCAATTGTTGCCATCGG+TGG 0.568840 3_1:-52449508 Msa0361780:CDS
TAGGTTCTGGAGCATGCCAA+TGG 0.569509 3_1:+52448772 None:intergenic
TGATTGGATGGTAAAGGGAA+GGG 0.572668 3_1:-52450094 Msa0361780:CDS
TATTAGGGGTGCGGAATTTG+GGG 0.576427 3_1:-52447943 Msa0361780:CDS
TATGATCCTTGAAAAGAATG+AGG 0.577938 3_1:-52449110 Msa0361780:CDS
GCTCCAGAACCTAGAGACCT+TGG 0.578057 3_1:-52448762 Msa0361780:CDS
CACTTGCAGAAACTAAGTGT+TGG 0.578809 3_1:-52448389 Msa0361780:CDS
ATCCATTTGAGAAATACCCT+CGG 0.579244 3_1:+52449873 None:intergenic
GAGAGAAAGATGTGATTGAG+TGG 0.580398 3_1:-52449471 Msa0361780:CDS
CATTCACAATTGATTGTGAT+GGG 0.582800 3_1:-52449594 Msa0361780:CDS
TCCAAGTGTTGGATGCCAGT+GGG 0.582818 3_1:+52447984 None:intergenic
ACGTAAAGAGCAGCCACTCG+AGG 0.583832 3_1:+52450165 None:intergenic
GGTTAAAGGAGTTTCCAGAA+TGG 0.587463 3_1:-52448289 Msa0361780:CDS
GTGGAATCCCTACAAAGTAC+AGG 0.588222 3_1:-52448919 Msa0361780:CDS
TTAGAATGAATTTGTACAAG+GGG 0.588994 3_1:+52447876 None:intergenic
CAGGGAAGGAGTCAAAATAT+GGG 0.589468 3_1:-52450460 Msa0361780:CDS
ATATCCTCGTCCTTTGACAG+TGG 0.590963 3_1:-52448938 Msa0361780:CDS
TCCATTTGAGAAATACCCTC+GGG 0.592930 3_1:+52449874 None:intergenic
AAAGAAATTATTATCGACAA+AGG 0.594036 3_1:-52448065 Msa0361780:CDS
TGTTGTCCAAATGAGCTCAT+TGG 0.597084 3_1:-52449571 Msa0361780:CDS
ATATCTCTATATTAGGGGTG+CGG 0.599719 3_1:-52447952 Msa0361780:CDS
GTGAACGCCTCTCAACAGCC+TGG 0.600191 3_1:+52450578 None:intergenic
CTGGCTTCTTCCCTTAACAC+TGG 0.601946 3_1:+52450597 None:intergenic
TCTCAATCATATGATGCTGA+AGG 0.603274 3_1:-52449949 Msa0361780:CDS
GATTCCACTGTCAAAGGACG+AGG 0.605722 3_1:+52448934 None:intergenic
TCTTTACGTCGAGGAAGCTG+AGG 0.606892 3_1:-52450151 Msa0361780:CDS
GCTGTTGAGAGGCGTTCACA+AGG 0.608080 3_1:-52450574 Msa0361780:CDS
CGCACTGTGGTGTCTGTGGT+AGG 0.612438 3_1:-52450066 Msa0361780:CDS
TGAAATCAAATTGAACTCGA+AGG 0.616519 3_1:+52448349 None:intergenic
GAAGAAGCCAGGCTGTTGAG+AGG 0.616968 3_1:-52450585 Msa0361780:CDS
CGTAAAGAGCAGCCACTCGA+GGG 0.617973 3_1:+52450166 None:intergenic
GGCAATTCAGATTCTCCACA+TGG 0.618598 3_1:-52447625 Msa0361780:CDS
CAAAGAGAGTGATTCAACAA+TGG 0.618903 3_1:-52449291 Msa0361780:CDS
CACAAATCTCAAAGTCCATG+TGG 0.623218 3_1:+52447610 None:intergenic
TATAGATAAAAGTCCACCGA+TGG 0.623609 3_1:+52449495 None:intergenic
TATTATGAGACATATTCTGA+GGG 0.625592 3_1:-52448681 Msa0361780:CDS
ATTAGAATGAATTTGTACAA+GGG 0.626800 3_1:+52447875 None:intergenic
ATATTATGAGACATATTCTG+AGG 0.627092 3_1:-52448682 Msa0361780:CDS
TTCAACAATGGATAGCTGAA+GGG 0.629322 3_1:-52449279 Msa0361780:CDS
GATAGCTGAAGGGTTTGTGA+AGG 0.629650 3_1:-52449269 Msa0361780:CDS
GCTATACATCCATGATCTCG+AGG 0.630988 3_1:+52450363 None:intergenic
TAAAGCGTTAGGAAAGCTGA+AGG 0.631963 3_1:-52448489 Msa0361780:CDS
TGGGGAGCGCAGTTCTACTG+AGG 0.632265 3_1:-52447925 Msa0361780:CDS
TAAGCGAGGATACTTGAACC+AGG 0.634851 3_1:+52449182 None:intergenic
CAGAAGCTATTCGACGACGA+GGG 0.635402 3_1:+52450313 None:intergenic
TTCTTAGGAATATTGTCCAG+CGG 0.637380 3_1:+52448866 None:intergenic
CTTGAATATCTCTATATTAG+GGG 0.640218 3_1:-52447957 Msa0361780:CDS
CAAATGGCACGACCCTCGAG+TGG 0.641097 3_1:-52450178 Msa0361780:CDS
AGAGCGCACTGTGGTGTCTG+TGG 0.641742 3_1:-52450070 Msa0361780:CDS
GAAATTACTTGCAGAAATCG+AGG 0.646047 3_1:-52449825 Msa0361780:CDS
ACTATGGAAGAAGTAGCAGA+GGG 0.651437 3_1:-52449232 Msa0361780:CDS
AAGCATTCAAGCATTCCTGA+AGG 0.652772 3_1:-52450523 Msa0361780:CDS
TTTGGCAACTCAAAATAACA+TGG 0.654767 3_1:+52448656 None:intergenic
CAAGAAACAAGAAATTCTAG+AGG 0.663163 3_1:-52450213 Msa0361780:CDS
TTACTGTGTTGGAATTGATG+TGG 0.665807 3_1:-52448247 Msa0361780:CDS
AGTGGCTGCTCTTTACGTCG+AGG 0.670141 3_1:-52450160 Msa0361780:CDS
AATCTGAAGAGTATACCCAC+TGG 0.676827 3_1:-52447999 Msa0361780:CDS
GTTTGGTTAGATATGAATGG+AGG 0.681375 3_1:-52448524 Msa0361780:CDS
GATCCTTAAGTGGAATAGTG+CGG 0.687126 3_1:-52449048 Msa0361780:CDS
TCAGAAGCTATTCGACGACG+AGG 0.687408 3_1:+52450312 None:intergenic
ATTTGAGAAATACCCTCGGG+AGG 0.693510 3_1:+52449877 None:intergenic
AAAAGAGTGATACCTCCCGA+GGG 0.694588 3_1:-52449889 Msa0361780:CDS
ATAATATGGACATAGAACCA+AGG 0.706782 3_1:+52448745 None:intergenic
CCGATGGCAACAATTGCTAG+CGG 0.711591 3_1:+52449511 None:intergenic
GTAGGATATTTATAACAACA+AGG 0.720499 3_1:-52449720 Msa0361780:CDS
AAAGCTAAGACATCTTATCG+GGG 0.724478 3_1:-52448615 Msa0361780:CDS
AGCTGAAGGAGACAACACCA+GGG 0.727839 3_1:-52450478 Msa0361780:CDS
TGTCTGTGGTAGGAATGGGA+GGG 0.744293 3_1:-52450056 Msa0361780:CDS
ATTATGAGACATATTCTGAG+GGG 0.754657 3_1:-52448680 Msa0361780:CDS
GGGAAGGGAAGAGCGCACTG+TGG 0.781746 3_1:-52450079 Msa0361780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATAAGCTTTATTATTTT+AGG - chr3_1:52450344-52450363 Msa0361780:CDS 10.0%
!!! ATATAAGCTTTATTATTTTA+GGG - chr3_1:52450345-52450364 Msa0361780:CDS 10.0%
!! ATTAAAAATTCTCATACATA+TGG + chr3_1:52450311-52450330 None:intergenic 15.0%
!! AATAACAATTACAAACAATT+TGG + chr3_1:52450529-52450548 None:intergenic 15.0%
!! TGAAATTGTTAAAAAATGCA+AGG - chr3_1:52448517-52448536 Msa0361780:CDS 20.0%
!! GAAATTGTTAAAAAATGCAA+GGG - chr3_1:52448518-52448537 Msa0361780:CDS 20.0%
!!! ATTGGGATAAAAGAAATTTT+AGG - chr3_1:52448659-52448678 Msa0361780:CDS 20.0%
!! ATATTAGGAGACATATTATT+AGG - chr3_1:52449347-52449366 Msa0361780:CDS 20.0%
!! AAAGAAATTATTATCGACAA+AGG - chr3_1:52449991-52450010 Msa0361780:CDS 20.0%
!! ATTAGAATGAATTTGTACAA+GGG + chr3_1:52450184-52450203 None:intergenic 20.0%
!! AGTACGAAAAAATAAGTTAT+AGG + chr3_1:52450269-52450288 None:intergenic 20.0%
!!! AAAGCTTATATTTTGATGAA+TGG + chr3_1:52450336-52450355 None:intergenic 20.0%
!!! ATGTTTGGAATGAACTTTTT+TGG - chr3_1:52448273-52448292 Msa0361780:CDS 25.0%
!!! TGTTTGGAATGAACTTTTTT+GGG - chr3_1:52448274-52448293 Msa0361780:CDS 25.0%
!! TTGATTGTAATAATGGAAGT+AGG - chr3_1:52448318-52448337 Msa0361780:CDS 25.0%
! GTAGGATATTTATAACAACA+AGG - chr3_1:52448336-52448355 Msa0361780:CDS 25.0%
!! TAAAGAGTCTTCTTTTATTG+AGG - chr3_1:52448382-52448401 Msa0361780:CDS 25.0%
!! GATTTAACTTCAAAATCTTC+TGG + chr3_1:52448746-52448765 None:intergenic 25.0%
! GACAATATTCCTAAGAATTT+GGG - chr3_1:52449196-52449215 Msa0361780:CDS 25.0%
! ATGAAATTTCCCAAATTCTT+AGG + chr3_1:52449208-52449227 None:intergenic 25.0%
! ATATTATGAGACATATTCTG+AGG - chr3_1:52449374-52449393 Msa0361780:CDS 25.0%
! TATTATGAGACATATTCTGA+GGG - chr3_1:52449375-52449394 Msa0361780:CDS 25.0%
! ACTGTCTTTGATTGAATTAA+AGG - chr3_1:52449468-52449487 Msa0361780:CDS 25.0%
! TCTTTGATTGAATTAAAGGA+TGG - chr3_1:52449472-52449491 Msa0361780:CDS 25.0%
! ATTGAATTAAAGGATGGTAT+TGG - chr3_1:52449478-52449497 Msa0361780:CDS 25.0%
! TTCAAAAACTTTCGCTAAAA+GGG - chr3_1:52449743-52449762 Msa0361780:CDS 25.0%
! AATGGATCTTTATCTGAATA+CGG + chr3_1:52449835-52449854 None:intergenic 25.0%
!!! AAACTTTTTAGTGATTGCAA+TGG + chr3_1:52449853-52449872 None:intergenic 25.0%
! TTAGACCTTAGTAATTATGA+AGG - chr3_1:52449895-52449914 Msa0361780:CDS 25.0%
! GTAAACCTTCATAATTACTA+AGG + chr3_1:52449903-52449922 None:intergenic 25.0%
!!! TTACATTTGCATTTTCAAGA+AGG - chr3_1:52449919-52449938 Msa0361780:CDS 25.0%
!! AAACTAAGAGTTTTCAAAGA+AGG + chr3_1:52450024-52450043 None:intergenic 25.0%
! TGAAAACTCTTAGTTTAATG+AGG - chr3_1:52450028-52450047 Msa0361780:CDS 25.0%
! AGCTTGAATATCTCTATATT+AGG - chr3_1:52450097-52450116 Msa0361780:CDS 25.0%
! GCTTGAATATCTCTATATTA+GGG - chr3_1:52450098-52450117 Msa0361780:CDS 25.0%
! CTTGAATATCTCTATATTAG+GGG - chr3_1:52450099-52450118 Msa0361780:CDS 25.0%
! TTAGAATGAATTTGTACAAG+GGG + chr3_1:52450183-52450202 None:intergenic 25.0%
! CATTAGAATGAATTTGTACA+AGG + chr3_1:52450185-52450204 None:intergenic 25.0%
! GTACAAATTCATTCTAATGA+TGG - chr3_1:52450186-52450205 Msa0361780:CDS 25.0%
!!! ATAACCATTTTGTTGTGATT+TGG - chr3_1:52450378-52450397 Msa0361780:CDS 25.0%
! AGTAAATGACCTTAACAATA+AGG + chr3_1:52450580-52450599 None:intergenic 25.0%
CATTGATGAATATTTGATCC+TGG - chr3_1:52447659-52447678 Msa0361780:intron 30.0%
ACAGAAAGAAGTGAAAGATA+TGG - chr3_1:52447801-52447820 Msa0361780:intron 30.0%
TTTCTTGTTCAAAAGAACGT+TGG + chr3_1:52447830-52447849 None:intergenic 30.0%
CAAGAAACAAGAAATTCTAG+AGG - chr3_1:52447843-52447862 Msa0361780:intron 30.0%
CAATCAATCAATCTTTGTCT+TGG + chr3_1:52447948-52447967 None:intergenic 30.0%
CAAGACAAAGATTGATTGAT+TGG - chr3_1:52447946-52447965 Msa0361780:CDS 30.0%
ACAAAGATTGATTGATTGGA+TGG - chr3_1:52447950-52447969 Msa0361780:CDS 30.0%
ATTGATTGATTGGATGGTAA+AGG - chr3_1:52447956-52447975 Msa0361780:CDS 30.0%
TTGATTGATTGGATGGTAAA+GGG - chr3_1:52447957-52447976 Msa0361780:CDS 30.0%
!! TTGTCGTATTTGATGATGTT+TGG - chr3_1:52448258-52448277 Msa0361780:CDS 30.0%
GCTGCAATTGATTGTAATAA+TGG - chr3_1:52448311-52448330 Msa0361780:CDS 30.0%
AACAAGGAAAAAGAAAGTTG+TGG - chr3_1:52448352-52448371 Msa0361780:CDS 30.0%
!! AAAGATTGTTCTGGAGTTAA+AGG + chr3_1:52448422-52448441 None:intergenic 30.0%
TTTAACTCCAGAACAATCTT+TGG - chr3_1:52448421-52448440 Msa0361780:CDS 30.0%
! TTTGGAGTTGTTCAATAAGA+AGG - chr3_1:52448439-52448458 Msa0361780:CDS 30.0%
CATTCACAATTGATTGTGAT+GGG - chr3_1:52448462-52448481 Msa0361780:CDS 30.0%
!!! AAGTCATGCTTGTTGTATTT+TGG - chr3_1:52448713-52448732 Msa0361780:CDS 30.0%
! AAAATTGATGGCAAAGCTAA+AGG - chr3_1:52448896-52448915 Msa0361780:CDS 30.0%
TATGATCCTTGAAAAGAATG+AGG - chr3_1:52448946-52448965 Msa0361780:CDS 30.0%
! TCAAATCCTCATTCTTTTCA+AGG + chr3_1:52448955-52448974 None:intergenic 30.0%
!!! TTTTTCAGGGAATGTATTGA+CGG - chr3_1:52449058-52449077 Msa0361780:CDS 30.0%
TCAATAACCTGTACTTTGTA+GGG + chr3_1:52449147-52449166 None:intergenic 30.0%
TTCAATAACCTGTACTTTGT+AGG + chr3_1:52449148-52449167 None:intergenic 30.0%
TACAAAGTACAGGTTATTGA+AGG - chr3_1:52449147-52449166 Msa0361780:CDS 30.0%
GGACAATATTCCTAAGAATT+TGG - chr3_1:52449195-52449214 Msa0361780:CDS 30.0%
TGATGCTTAAATACTTCAAG+TGG + chr3_1:52449231-52449250 None:intergenic 30.0%
! ACTTGAAGTATTTAAGCATC+AGG - chr3_1:52449230-52449249 Msa0361780:CDS 30.0%
ATAATATGGACATAGAACCA+AGG + chr3_1:52449314-52449333 None:intergenic 30.0%
GGTTCTATGTCCATATTATA+AGG - chr3_1:52449315-52449334 Msa0361780:CDS 30.0%
! TCCATATTATAAGGCATCTT+TGG - chr3_1:52449324-52449343 Msa0361780:CDS 30.0%
TCCAAAGATGCCTTATAATA+TGG + chr3_1:52449328-52449347 None:intergenic 30.0%
! ATAAGGCATCTTTGGATATT+AGG - chr3_1:52449332-52449351 Msa0361780:CDS 30.0%
ATTATGAGACATATTCTGAG+GGG - chr3_1:52449376-52449395 Msa0361780:CDS 30.0%
TTTGGCAACTCAAAATAACA+TGG + chr3_1:52449403-52449422 None:intergenic 30.0%
!!! ATGTTATTTTGAGTTGCCAA+AGG - chr3_1:52449402-52449421 Msa0361780:CDS 30.0%
AGAAAGCTAAGACATCTTAT+CGG - chr3_1:52449439-52449458 Msa0361780:CDS 30.0%
GATGTTTGGTTAGATATGAA+TGG - chr3_1:52449529-52449548 Msa0361780:CDS 30.0%
TGAAATCAAATTGAACTCGA+AGG + chr3_1:52449710-52449729 None:intergenic 30.0%
!!! GAAAGTTTTTGAAGCATAGT+TGG + chr3_1:52449736-52449755 None:intergenic 30.0%
CTTCAAAAACTTTCGCTAAA+AGG - chr3_1:52449742-52449761 Msa0361780:CDS 30.0%
TCAAAAACTTTCGCTAAAAG+GGG - chr3_1:52449744-52449763 Msa0361780:CDS 30.0%
TCTTCAAAATCTTACTGTGT+TGG - chr3_1:52449798-52449817 Msa0361780:CDS 30.0%
!! ATTTGCATTTTCAAGAAGGA+GGG - chr3_1:52449923-52449942 Msa0361780:CDS 30.0%
GAGTTAGAAATATTTACTCC+AGG - chr3_1:52450230-52450249 Msa0361780:CDS 30.0%
ATTGTGAGACCTTATTGTTA+AGG - chr3_1:52450568-52450587 Msa0361780:CDS 30.0%
! AGGTCATTTACTTTCTGTTT+TGG - chr3_1:52450588-52450607 Msa0361780:CDS 30.0%
AAATATGGGTGAAGCAACTT+AGG - chr3_1:52447610-52447629 Msa0361780:exon 35.0%
AATATGGGTGAAGCAACTTA+GGG - chr3_1:52447611-52447630 Msa0361780:exon 35.0%
! CTTGCTGTCAAAAACTTTCT+TGG + chr3_1:52448045-52448064 None:intergenic 35.0%
! CAAGAAAGTTTTTGACAGCA+AGG - chr3_1:52448043-52448062 Msa0361780:CDS 35.0%
TTTGACAGCAAGGATATCAT+TGG - chr3_1:52448053-52448072 Msa0361780:CDS 35.0%
TCTCAATCATATGATGCTGA+AGG - chr3_1:52448107-52448126 Msa0361780:CDS 35.0%
ATCCATTTGAGAAATACCCT+CGG + chr3_1:52448186-52448205 None:intergenic 35.0%
! AGGGTATTTCTCAAATGGAT+CGG - chr3_1:52448186-52448205 Msa0361780:CDS 35.0%
GAAATTACTTGCAGAAATCG+AGG - chr3_1:52448231-52448250 Msa0361780:CDS 35.0%
AACAACTCCAAAGATTGTTC+TGG + chr3_1:52448431-52448450 None:intergenic 35.0%
GCATTCACAATTGATTGTGA+TGG - chr3_1:52448461-52448480 Msa0361780:CDS 35.0%
TATAGATAAAAGTCCACCGA+TGG + chr3_1:52448564-52448583 None:intergenic 35.0%
AAGACAGATACACATCTGAT+TGG - chr3_1:52448641-52448660 Msa0361780:CDS 35.0%
AGACAGATACACATCTGATT+GGG - chr3_1:52448642-52448661 Msa0361780:CDS 35.0%
AAGCATGACTTCAGATAGTA+AGG + chr3_1:52448704-52448723 None:intergenic 35.0%
CAAAGAGAGTGATTCAACAA+TGG - chr3_1:52448765-52448784 Msa0361780:CDS 35.0%
ATTCAACAATGGATAGCTGA+AGG - chr3_1:52448776-52448795 Msa0361780:CDS 35.0%
TTCAACAATGGATAGCTGAA+GGG - chr3_1:52448777-52448796 Msa0361780:CDS 35.0%
GTATCCTCGCTTAAAATTGA+TGG - chr3_1:52448884-52448903 Msa0361780:CDS 35.0%
! TTTGCCATCAATTTTAAGCG+AGG + chr3_1:52448891-52448910 None:intergenic 35.0%
TGCAAGCATATTAGTGATGA+TGG - chr3_1:52448980-52448999 Msa0361780:CDS 35.0%
GATGGAAAAAGATCCTTAAG+TGG - chr3_1:52448998-52449017 Msa0361780:CDS 35.0%
!!! AACCAGTGACGATTTTTTCA+GGG - chr3_1:52449045-52449064 Msa0361780:CDS 35.0%
! GTTCGGTCACTATTTTCTTT+TGG - chr3_1:52449088-52449107 Msa0361780:CDS 35.0%
!! TGATTTTGAAGATTTTCCGC+TGG - chr3_1:52449174-52449193 Msa0361780:CDS 35.0%
TTCTTAGGAATATTGTCCAG+CGG + chr3_1:52449193-52449212 None:intergenic 35.0%
GAAAGCTAAGACATCTTATC+GGG - chr3_1:52449440-52449459 Msa0361780:CDS 35.0%
AAAGCTAAGACATCTTATCG+GGG - chr3_1:52449441-52449460 Msa0361780:CDS 35.0%
GTTTGGTTAGATATGAATGG+AGG - chr3_1:52449532-52449551 Msa0361780:CDS 35.0%
! GTTGGTGTTCATAAGGAAAA+TGG - chr3_1:52449610-52449629 Msa0361780:CDS 35.0%
! GTGTTGCATTTCATTGATTG+AGG + chr3_1:52449650-52449669 None:intergenic 35.0%
!!! AGTTTTTGAAGCATAGTTGG+TGG + chr3_1:52449733-52449752 None:intergenic 35.0%
CAAAAACTTTCGCTAAAAGG+GGG - chr3_1:52449745-52449764 Msa0361780:CDS 35.0%
AAAAACTTTCGCTAAAAGGG+GGG - chr3_1:52449746-52449765 Msa0361780:CDS 35.0%
TGAAGATCTAACATCCATTC+TGG + chr3_1:52449784-52449803 None:intergenic 35.0%
TTACTGTGTTGGAATTGATG+TGG - chr3_1:52449809-52449828 Msa0361780:CDS 35.0%
!! CATTTGCATTTTCAAGAAGG+AGG - chr3_1:52449922-52449941 Msa0361780:CDS 35.0%
AGGAGGGTTTCAGAAATTAA+AGG - chr3_1:52449939-52449958 Msa0361780:CDS 35.0%
ATATCTCTATATTAGGGGTG+CGG - chr3_1:52450104-52450123 Msa0361780:CDS 35.0%
GCAGAGTAACTAAAAAGTCA+AGG - chr3_1:52450208-52450227 Msa0361780:CDS 35.0%
CCTACCAAATCACAACAAAA+TGG + chr3_1:52450385-52450404 None:intergenic 35.0%
!!! CCATTTTGTTGTGATTTGGT+AGG - chr3_1:52450382-52450401 Msa0361780:CDS 35.0%
GTGTGATCGTTCTTTAACAT+TGG - chr3_1:52450491-52450510 Msa0361780:CDS 35.0%
ACCAACTACTTCCAGTGTTA+AGG - chr3_1:52447448-52447467 Msa0361780:three_prime_UTR 40.0%
CCAACTACTTCCAGTGTTAA+GGG - chr3_1:52447449-52447468 Msa0361780:three_prime_UTR 40.0%
CGCAGAGATTAAAGATGAAC+TGG - chr3_1:52447509-52447528 Msa0361780:three_prime_UTR 40.0%
AAGCATTCAAGCATTCCTGA+AGG - chr3_1:52447533-52447552 Msa0361780:three_prime_UTR 40.0%
! CTCTTTTATCAGCATCCTTC+AGG + chr3_1:52447551-52447570 None:intergenic 40.0%
CAGGGAAGGAGTCAAAATAT+GGG - chr3_1:52447596-52447615 Msa0361780:three_prime_UTR 40.0%
! CAAGAAATTCTAGAGGAAGC+AGG - chr3_1:52447850-52447869 Msa0361780:intron 40.0%
TTGATTGGATGGTAAAGGGA+AGG - chr3_1:52447961-52447980 Msa0361780:CDS 40.0%
TGATTGGATGGTAAAGGGAA+GGG - chr3_1:52447962-52447981 Msa0361780:CDS 40.0%
GACACTTTGATTGTCGTGTA+TGG - chr3_1:52448075-52448094 Msa0361780:CDS 40.0%
TCCATTTGAGAAATACCCTC+GGG + chr3_1:52448185-52448204 None:intergenic 40.0%
GGGTATTTCTCAAATGGATC+GGG - chr3_1:52448187-52448206 Msa0361780:CDS 40.0%
TGTTGTCCAAATGAGCTCAT+TGG - chr3_1:52448485-52448504 Msa0361780:CDS 40.0%
GCTATACCAATGAGCTCATT+TGG + chr3_1:52448494-52448513 None:intergenic 40.0%
GAGAGAAAGATGTGATTGAG+TGG - chr3_1:52448585-52448604 Msa0361780:CDS 40.0%
ACTATGGAAGAAGTAGCAGA+GGG - chr3_1:52448824-52448843 Msa0361780:CDS 40.0%
! AGAGTTGATTCATAGAAGCC+TGG - chr3_1:52448856-52448875 Msa0361780:CDS 40.0%
GATCCTTAAGTGGAATAGTG+CGG - chr3_1:52449008-52449027 Msa0361780:CDS 40.0%
!!! CAACCAGTGACGATTTTTTC+AGG - chr3_1:52449044-52449063 Msa0361780:CDS 40.0%
TTCCCTGAAAAAATCGTCAC+TGG + chr3_1:52449050-52449069 None:intergenic 40.0%
! GTATTGACGGATCTCATGTT+CGG - chr3_1:52449071-52449090 Msa0361780:CDS 40.0%
! CGGTCACTATTTTCTTTTGG+AGG - chr3_1:52449091-52449110 Msa0361780:CDS 40.0%
GTTGAAGTCCCTAAATCCAT+TGG - chr3_1:52449268-52449287 Msa0361780:CDS 40.0%
! TTGAGTTGCCAAAGGAGATT+AGG - chr3_1:52449410-52449429 Msa0361780:CDS 40.0%
CTAAGCTTCCTAATCTCCTT+TGG + chr3_1:52449421-52449440 None:intergenic 40.0%
AACATCACGCAGAGTTTGTA+GGG + chr3_1:52449515-52449534 None:intergenic 40.0%
AAACATCACGCAGAGTTTGT+AGG + chr3_1:52449516-52449535 None:intergenic 40.0%
TACAAACTCTGCGTGATGTT+TGG - chr3_1:52449515-52449534 Msa0361780:CDS 40.0%
! GCAGAGGTAATTAAAGCGTT+AGG - chr3_1:52449556-52449575 Msa0361780:CDS 40.0%
! TAAAGCGTTAGGAAAGCTGA+AGG - chr3_1:52449567-52449586 Msa0361780:CDS 40.0%
TAGGAAAGCTGAAGGAGATA+AGG - chr3_1:52449575-52449594 Msa0361780:CDS 40.0%
AGGAAAGCTGAAGGAGATAA+GGG - chr3_1:52449576-52449595 Msa0361780:CDS 40.0%
TGAAGGAGATAAGGGATTTG+AGG - chr3_1:52449584-52449603 Msa0361780:CDS 40.0%
! ATAAGGGATTTGAGGTTGGT+TGG - chr3_1:52449592-52449611 Msa0361780:CDS 40.0%
CACTTGCAGAAACTAAGTGT+TGG - chr3_1:52449667-52449686 Msa0361780:CDS 40.0%
GGTTAAAGGAGTTTCCAGAA+TGG - chr3_1:52449767-52449786 Msa0361780:CDS 40.0%
! TGCAACACTTGTTGATCTTG+TGG - chr3_1:52449872-52449891 Msa0361780:CDS 40.0%
! AATCTGAAGAGTATACCCAC+TGG - chr3_1:52450057-52450076 Msa0361780:CDS 40.0%
ATTCAAGCTTCTCCAAGTGT+TGG + chr3_1:52450086-52450105 None:intergenic 40.0%
! TATATTAGGGGTGCGGAATT+TGG - chr3_1:52450111-52450130 Msa0361780:CDS 40.0%
! ATATTAGGGGTGCGGAATTT+GGG - chr3_1:52450112-52450131 Msa0361780:CDS 40.0%
GTTCTACTGAGGATTGGAAT+TGG - chr3_1:52450142-52450161 Msa0361780:CDS 40.0%
TGAGGATTGGAATTGGATCA+TGG - chr3_1:52450149-52450168 Msa0361780:CDS 40.0%
! ATAGGAAGAAAAAGCACACC+TGG + chr3_1:52450251-52450270 None:intergenic 40.0%
!! TGTTGTGATTTGGTAGGTGA+TGG - chr3_1:52450388-52450407 Msa0361780:CDS 40.0%
CACAAATCTCAAAGTCCATG+TGG + chr3_1:52450449-52450468 None:intergenic 40.0%
CCCTTAACACTGGAAGTAGT+TGG + chr3_1:52447452-52447471 None:intergenic 45.0%
GATGCTGATAAAAGAGCAGC+AGG - chr3_1:52447555-52447574 Msa0361780:three_prime_UTR 45.0%
!!! CCATATTTTGACTCCTTCCC+TGG + chr3_1:52447598-52447617 None:intergenic 45.0%
CCAGGGAAGGAGTCAAAATA+TGG - chr3_1:52447595-52447614 Msa0361780:three_prime_UTR 45.0%
GCTATACATCCATGATCTCG+AGG + chr3_1:52447696-52447715 None:intergenic 45.0%
AAAAAGAGTGATACCTCCCG+AGG - chr3_1:52448166-52448185 Msa0361780:CDS 45.0%
AAAAGAGTGATACCTCCCGA+GGG - chr3_1:52448167-52448186 Msa0361780:CDS 45.0%
ATTTGAGAAATACCCTCGGG+AGG + chr3_1:52448182-52448201 None:intergenic 45.0%
!! TCCCGAGGGTATTTCTCAAA+TGG - chr3_1:52448181-52448200 Msa0361780:CDS 45.0%
GATAGCTGAAGGGTTTGTGA+AGG - chr3_1:52448787-52448806 Msa0361780:CDS 45.0%
AGGGTTTGTGAAGGAGGAAA+AGG - chr3_1:52448796-52448815 Msa0361780:CDS 45.0%
GGGTTTGTGAAGGAGGAAAA+GGG - chr3_1:52448797-52448816 Msa0361780:CDS 45.0%
GGAGGAAAAGGGAAAGACTA+TGG - chr3_1:52448808-52448827 Msa0361780:CDS 45.0%
GACTATGGAAGAAGTAGCAG+AGG - chr3_1:52448823-52448842 Msa0361780:CDS 45.0%
TAAGCGAGGATACTTGAACC+AGG + chr3_1:52448877-52448896 None:intergenic 45.0%
ATATCCTCGTCCTTTGACAG+TGG - chr3_1:52449118-52449137 Msa0361780:CDS 45.0%
TGTAGGGATTCCACTGTCAA+AGG + chr3_1:52449131-52449150 None:intergenic 45.0%
GTGGAATCCCTACAAAGTAC+AGG - chr3_1:52449137-52449156 Msa0361780:CDS 45.0%
! GGAGCATGCCAATGGATTTA+GGG + chr3_1:52449279-52449298 None:intergenic 45.0%
! TGGAGCATGCCAATGGATTT+AGG + chr3_1:52449280-52449299 None:intergenic 45.0%
GACATAGAACCAAGGTCTCT+AGG + chr3_1:52449306-52449325 None:intergenic 45.0%
AGATATGAATGGAGGAGCAG+AGG - chr3_1:52449540-52449559 Msa0361780:CDS 45.0%
! GGAGATAAGGGATTTGAGGT+TGG - chr3_1:52449588-52449607 Msa0361780:CDS 45.0%
! GAGGTTGGTTGGTGTTCATA+AGG - chr3_1:52449603-52449622 Msa0361780:CDS 45.0%
TTCGCTAAAAGGGGGGTTAA+AGG - chr3_1:52449753-52449772 Msa0361780:CDS 45.0%
! TATTAGGGGTGCGGAATTTG+GGG - chr3_1:52450113-52450132 Msa0361780:CDS 45.0%
! GACTTCAAGTTCAAGTGCGA+TGG - chr3_1:52450410-52450429 Msa0361780:CDS 45.0%
GGCAATTCAGATTCTCCACA+TGG - chr3_1:52450431-52450450 Msa0361780:CDS 45.0%
CTGGCTTCTTCCCTTAACAC+TGG + chr3_1:52447462-52447481 None:intergenic 50.0%
CAGTGTTAAGGGAAGAAGCC+AGG - chr3_1:52447460-52447479 Msa0361780:three_prime_UTR 50.0%
AAAAGAGCAGCAGGAGCTGA+AGG - chr3_1:52447564-52447583 Msa0361780:three_prime_UTR 50.0%
AGCTGAAGGAGACAACACCA+GGG - chr3_1:52447578-52447597 Msa0361780:three_prime_UTR 50.0%
GCACAACAACCTCGAGATCA+TGG - chr3_1:52447684-52447703 Msa0361780:intron 50.0%
CAGAAGCTATTCGACGACGA+GGG + chr3_1:52447746-52447765 None:intergenic 50.0%
TCAGAAGCTATTCGACGACG+AGG + chr3_1:52447747-52447766 None:intergenic 50.0%
GAGGAAGCAGGAATGCCAAA+TGG - chr3_1:52447862-52447881 Msa0361780:intron 50.0%
TCTTTACGTCGAGGAAGCTG+AGG - chr3_1:52447905-52447924 Msa0361780:CDS 50.0%
TGTGGTGTCTGTGGTAGGAA+TGG - chr3_1:52447995-52448014 Msa0361780:CDS 50.0%
GTGGTGTCTGTGGTAGGAAT+GGG - chr3_1:52447996-52448015 Msa0361780:CDS 50.0%
TGTCTGTGGTAGGAATGGGA+GGG - chr3_1:52448000-52448019 Msa0361780:CDS 50.0%
CCGATGGCAACAATTGCTAG+CGG + chr3_1:52448548-52448567 None:intergenic 50.0%
CCGCTAGCAATTGTTGCCAT+CGG - chr3_1:52448545-52448564 Msa0361780:CDS 50.0%
CTAGCAATTGTTGCCATCGG+TGG - chr3_1:52448548-52448567 Msa0361780:CDS 50.0%
AGCTGAAGGGTTTGTGAAGG+AGG - chr3_1:52448790-52448809 Msa0361780:CDS 50.0%
! CGTCACTGGTTGTTGCTGAT+AGG + chr3_1:52449036-52449055 None:intergenic 50.0%
GATTCCACTGTCAAAGGACG+AGG + chr3_1:52449125-52449144 None:intergenic 50.0%
!! TAGGTTCTGGAGCATGCCAA+TGG + chr3_1:52449287-52449306 None:intergenic 50.0%
GAACCAAGGTCTCTAGGTTC+TGG + chr3_1:52449300-52449319 None:intergenic 50.0%
!! TCCAAGTGTTGGATGCCAGT+GGG + chr3_1:52450075-52450094 None:intergenic 50.0%
AGCGCAGTTCTACTGAGGAT+TGG - chr3_1:52450136-52450155 Msa0361780:CDS 50.0%
GAAGAAGCCAGGCTGTTGAG+AGG - chr3_1:52447471-52447490 Msa0361780:three_prime_UTR 55.0%
!! GCTGTTGAGAGGCGTTCACA+AGG - chr3_1:52447482-52447501 Msa0361780:three_prime_UTR 55.0%
GAGCTGAAGGAGACAACACC+AGG - chr3_1:52447577-52447596 Msa0361780:three_prime_UTR 55.0%
GAAGGAGACAACACCAGGGA+AGG - chr3_1:52447582-52447601 Msa0361780:three_prime_UTR 55.0%
CTCGAGGTTGTTGTGCTACC+AGG + chr3_1:52447680-52447699 None:intergenic 55.0%
CGTAAAGAGCAGCCACTCGA+GGG + chr3_1:52447893-52447912 None:intergenic 55.0%
ACGTAAAGAGCAGCCACTCG+AGG + chr3_1:52447894-52447913 None:intergenic 55.0%
AGTGGCTGCTCTTTACGTCG+AGG - chr3_1:52447896-52447915 Msa0361780:CDS 55.0%
GTCGAGGAAGCTGAGGTTGT+GGG - chr3_1:52447912-52447931 Msa0361780:CDS 55.0%
GTGTCTGTGGTAGGAATGGG+AGG - chr3_1:52447999-52448018 Msa0361780:CDS 55.0%
GCGCCGCACTATTCCACTTA+AGG + chr3_1:52449014-52449033 None:intergenic 55.0%
GCTCCAGAACCTAGAGACCT+TGG - chr3_1:52449294-52449313 Msa0361780:CDS 55.0%
ACCCACTGGCATCCAACACT+TGG - chr3_1:52450071-52450090 Msa0361780:CDS 55.0%
!! CTCCAAGTGTTGGATGCCAG+TGG + chr3_1:52450076-52450095 None:intergenic 55.0%
GTGAACGCCTCTCAACAGCC+TGG + chr3_1:52447481-52447500 None:intergenic 60.0%
! CACTCGAGGGTCGTGCCATT+TGG + chr3_1:52447880-52447899 None:intergenic 60.0%
CAAATGGCACGACCCTCGAG+TGG - chr3_1:52447878-52447897 Msa0361780:CDS 60.0%
CGTCGAGGAAGCTGAGGTTG+TGG - chr3_1:52447911-52447930 Msa0361780:CDS 60.0%
AGAGCGCACTGTGGTGTCTG+TGG - chr3_1:52447986-52448005 Msa0361780:CDS 60.0%
CGCACTGTGGTGTCTGTGGT+AGG - chr3_1:52447990-52448009 Msa0361780:CDS 60.0%
GTGGTAGGAATGGGAGGGCA+AGG - chr3_1:52448005-52448024 Msa0361780:CDS 60.0%
! TGGGGAGCGCAGTTCTACTG+AGG - chr3_1:52450131-52450150 Msa0361780:CDS 60.0%
! GGGAAGGGAAGAGCGCACTG+TGG - chr3_1:52447977-52447996 Msa0361780:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 52447426 52450652 52447426 ID=Msa0361780;Name=Msa0361780
chr3_1 mRNA 52447426 52450652 52447426 ID=Msa0361780-mRNA-1;Parent=Msa0361780;Name=Msa0361780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0.5|1|1|1|2|192|947
chr3_1 exon 52447426 52447674 52447426 ID=Msa0361780-mRNA-1:exon:9413;Parent=Msa0361780-mRNA-1
chr3_1 exon 52447866 52450652 52447866 ID=Msa0361780-mRNA-1:exon:9412;Parent=Msa0361780-mRNA-1
chr3_1 CDS 52447866 52450652 52447866 ID=Msa0361780-mRNA-1:cds;Parent=Msa0361780-mRNA-1
chr3_1 CDS 52447618 52447674 52447618 ID=Msa0361780-mRNA-1:cds;Parent=Msa0361780-mRNA-1
chr3_1 three_prime_UTR 52447426 52447617 52447426 ID=Msa0361780-mRNA-1:three_prime_utr;Parent=Msa0361780-mRNA-1
Gene Sequence

>Msa0361780

ATGGCGGTGTCTTTAGTTATTGACCAACTACTTCCAGTGTTAAGGGAAGAAGCCAGGCTGTTGAGAGGCGTTCACAAGGAGTTCGCAGAGATTAAAGATGAACTGGAAAGCATTCAAGCATTCCTGAAGGATGCTGATAAAAGAGCAGCAGGAGCTGAAGGAGACAACACCAGGGAAGGAGTCAAAATATGGGTGAAGCAACTTAGGGAAGCAGCTTTTCGCATAGAAGATATCATTGATGAATATTTGATCCTGGTAGCACAACAACCTCGAGATCATGGATGTATAGCTTTACTTCATAAGCTCAAAACTATGATCCCTCGTCGTCGAATAGCTTCTGAGATTCAAGATGTTAAGTCATCTGTTCGTGAGATAACAGAAAGAAGTGAAAGATATGGCTTCCAACGTTCTTTTGAACAAGAAACAAGAAATTCTAGAGGAAGCAGGAATGCCAAATGGCACGACCCTCGAGTGGCTGCTCTTTACGTCGAGGAAGCTGAGGTTGTGGGATTTGAAGCGCCAAGACAAAGATTGATTGATTGGATGGTAAAGGGAAGGGAAGAGCGCACTGTGGTGTCTGTGGTAGGAATGGGAGGGCAAGGAAAAACAACTCTAGCCAAGAAAGTTTTTGACAGCAAGGATATCATTGGACACTTTGATTGTCGTGTATGGATTACAGTGTCTCAATCATATGATGCTGAAGGATTGTTGAGAGACATGTTGCTAAAGATTTGCAAACAAAAAAGAGTGATACCTCCCGAGGGTATTTCTCAAATGGATCGGGAGTCATTGACTATTGAAGTGAGAAATTACTTGCAGAAATCGAGGTACATTGTCGTATTTGATGATGTTTGGAATGAACTTTTTTGGGATGATATTAAATCTGCTGCAATTGATTGTAATAATGGAAGTAGGATATTTATAACAACAAGGAAAAAGAAAGTTGTGGAGTTTTGTAAAGAGTCTTCTTTTATTGAGGTGCATGAACTGCAACCTTTAACTCCAGAACAATCTTTGGAGTTGTTCAATAAGAAGGCATTCACAATTGATTGTGATGGGTGTTGTCCAAATGAGCTCATTGGTATAGCTAATGAAATTGTTAAAAAATGCAAGGGTTTACCGCTAGCAATTGTTGCCATCGGTGGACTTTTATCTATAAGAGAGAAAGATGTGATTGAGTGGCATAGATTTAGTGAAAATCTAAATTTAGAGCTAAAGACAGATACACATCTGATTGGGATAAAAGAAATTTTAGGTTTAAGTTATGATGATTTGCCTTACTATCTGAAGTCATGCTTGTTGTATTTTGGAGTATATCCAGAAGATTTTGAAGTTAAATCAAAGAGAGTGATTCAACAATGGATAGCTGAAGGGTTTGTGAAGGAGGAAAAGGGAAAGACTATGGAAGAAGTAGCAGAGGGATATCTAACAGAGTTGATTCATAGAAGCCTGGTTCAAGTATCCTCGCTTAAAATTGATGGCAAAGCTAAAGGTTGTCGTGTTCATGATCTAATACATGATATGATCCTTGAAAAGAATGAGGATTTGAATTTTTGCAAGCATATTAGTGATGATGGAAAAAGATCCTTAAGTGGAATAGTGCGGCGCCTATCAGCAACAACCAGTGACGATTTTTTCAGGGAATGTATTGACGGATCTCATGTTCGGTCACTATTTTCTTTTGGAGGTGAAATATCCTCGTCCTTTGACAGTGGAATCCCTACAAAGTACAGGTTATTGAAGGTTCTTGATTTTGAAGATTTTCCGCTGGACAATATTCCTAAGAATTTGGGAAATTTCATCCACTTGAAGTATTTAAGCATCAGGATGTCAATTGATAAAGTTGAAGTCCCTAAATCCATTGGCATGCTCCAGAACCTAGAGACCTTGGTTCTATGTCCATATTATAAGGCATCTTTGGATATTAGGAGACATATTATTAGGAGACATATTATGAGACATATTCTGAGGGGTCCATGTTATTTTGAGTTGCCAAAGGAGATTAGGAAGCTTAGAAAGCTAAGACATCTTATCGGGGATCGACTGTCTTTGATTGAATTAAAGGATGGTATTGGAGAGATGAAGTCCCTACAAACTCTGCGTGATGTTTGGTTAGATATGAATGGAGGAGCAGAGGTAATTAAAGCGTTAGGAAAGCTGAAGGAGATAAGGGATTTGAGGTTGGTTGGTGTTCATAAGGAAAATGGAAGCATTTTATCTTCCTCAATCAATGAAATGCAACACTTGCAGAAACTAAGTGTTGGAACTTTTCGACTTGATACCTTCGAGTTCAATTTGATTTCACCACCAACTATGCTTCAAAAACTTTCGCTAAAAGGGGGGTTAAAGGAGTTTCCAGAATGGATGTTAGATCTTCAAAATCTTACTGTGTTGGAATTGATGTGGCCGTATTCAGATAAAGATCCATTGCAATCACTAAAAAGTTTGCAACACTTGTTGATCTTGTGGTTAGACCTTAGTAATTATGAAGGTTTACATTTGCATTTTCAAGAAGGAGGGTTTCAGAAATTAAAGGAACTGAGTGTTGTAGATTCATCTAGAGTGAAAGAAATTATTATCGACAAAGGATCAATGCCTTCTTTGAAAACTCTTAGTTTAATGAGGTTTTTCAATCTGAAGAGTATACCCACTGGCATCCAACACTTGGAGAAGCTTGAATATCTCTATATTAGGGGTGCGGAATTTGGGGAGCGCAGTTCTACTGAGGATTGGAATTGGATCATGGAGCATGTGCCCCTTGTACAAATTCATTCTAATGATGGCAGAGTGATGGACTTCAAGTTCAAGTGCGATGGCAATTCAGATTCTCCACATGGACTTTGA

Protein sequence

>Msa0361780

MAVSLVIDQLLPVLREEARLLRGVHKEFAEIKDELESIQAFLKDADKRAAGAEGDNTREGVKIWVKQLREAAFRIEDIIDEYLILVAQQPRDHGCIALLHKLKTMIPRRRIASEIQDVKSSVREITERSERYGFQRSFEQETRNSRGSRNAKWHDPRVAALYVEEAEVVGFEAPRQRLIDWMVKGREERTVVSVVGMGGQGKTTLAKKVFDSKDIIGHFDCRVWITVSQSYDAEGLLRDMLLKICKQKRVIPPEGISQMDRESLTIEVRNYLQKSRYIVVFDDVWNELFWDDIKSAAIDCNNGSRIFITTRKKKVVEFCKESSFIEVHELQPLTPEQSLELFNKKAFTIDCDGCCPNELIGIANEIVKKCKGLPLAIVAIGGLLSIREKDVIEWHRFSENLNLELKTDTHLIGIKEILGLSYDDLPYYLKSCLLYFGVYPEDFEVKSKRVIQQWIAEGFVKEEKGKTMEEVAEGYLTELIHRSLVQVSSLKIDGKAKGCRVHDLIHDMILEKNEDLNFCKHISDDGKRSLSGIVRRLSATTSDDFFRECIDGSHVRSLFSFGGEISSSFDSGIPTKYRLLKVLDFEDFPLDNIPKNLGNFIHLKYLSIRMSIDKVEVPKSIGMLQNLETLVLCPYYKASLDIRRHIIRRHIMRHILRGPCYFELPKEIRKLRKLRHLIGDRLSLIELKDGIGEMKSLQTLRDVWLDMNGGAEVIKALGKLKEIRDLRLVGVHKENGSILSSSINEMQHLQKLSVGTFRLDTFEFNLISPPTMLQKLSLKGGLKEFPEWMLDLQNLTVLELMWPYSDKDPLQSLKSLQHLLILWLDLSNYEGLHLHFQEGGFQKLKELSVVDSSRVKEIIIDKGSMPSLKTLSLMRFFNLKSIPTGIQHLEKLEYLYIRGAEFGERSSTEDWNWIMEHVPLVQIHSNDGRVMDFKFKCDGNSDSPHGL*