Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637600 | XP_003595735.1 | 92.857 | 532 | 17 | 1 | 1 | 511 | 1 | 532 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637600 | sp|Q9FPS3|UBP24_ARATH | 50.871 | 574 | 196 | 16 | 1 | 511 | 1 | 551 | 1.67e-161 | 472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637600 | G7IGQ8 | 92.857 | 532 | 17 | 1 | 1 | 511 | 1 | 532 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054480 | Msa0637600 | 0.812493 | 4.123151e-51 | -8.615850e-47 |
| Msa0054820 | Msa0637600 | 0.810484 | 1.126323e-50 | -8.615850e-47 |
| Msa0056450 | Msa0637600 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0074600 | Msa0637600 | 0.808115 | 3.628977e-50 | -8.615850e-47 |
| Msa0080090 | Msa0637600 | 0.820223 | 7.685098e-53 | -8.615850e-47 |
| Msa0100160 | Msa0637600 | 0.818832 | 1.595365e-52 | -8.615850e-47 |
| Msa0108410 | Msa0637600 | 0.808133 | 3.597107e-50 | -8.615850e-47 |
| Msa0625720 | Msa0637600 | 0.804173 | 2.452508e-49 | -8.615850e-47 |
| Msa0633700 | Msa0637600 | 0.819494 | 1.127589e-52 | -8.615850e-47 |
| Msa0637600 | Msa0637720 | 0.960303 | 2.094244e-118 | -8.615850e-47 |
| Msa0637600 | Msa0637900 | 0.807568 | 4.744523e-50 | -8.615850e-47 |
| Msa0637600 | Msa0661320 | 0.818187 | 2.233827e-52 | -8.615850e-47 |
| Msa0637600 | Msa0707250 | 0.802560 | 5.293907e-49 | -8.615850e-47 |
| Msa0637600 | Msa0733010 | 0.827636 | 1.402499e-54 | -8.615850e-47 |
| Msa0637600 | Msa0792540 | 0.806790 | 6.930621e-50 | -8.615850e-47 |
| Msa0637600 | Msa0797770 | 0.813439 | 2.558068e-51 | -8.615850e-47 |
| Msa0637600 | Msa0817460 | 0.822433 | 2.375229e-53 | -8.615850e-47 |
| Msa0637600 | Msa0835230 | 0.814488 | 1.501664e-51 | -8.615850e-47 |
| Msa0637600 | Msa0868160 | 0.822464 | 2.335544e-53 | -8.615850e-47 |
| Msa0637600 | Msa0899970 | 0.803031 | 4.231737e-49 | -8.615850e-47 |
| Msa0637600 | Msa0900620 | 0.810918 | 9.077727e-51 | -8.615850e-47 |
| Msa0637600 | Msa0945550 | 0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0637600 | Msa0965080 | 0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa0637600 | Msa0965290 | 0.806309 | 8.755750e-50 | -8.615850e-47 |
| Msa0637600 | Msa0986510 | 0.813605 | 2.352580e-51 | -8.615850e-47 |
| Msa0637600 | Msa0999680 | 0.802279 | 6.048419e-49 | -8.615850e-47 |
| Msa0637600 | Msa1034500 | 0.812303 | 4.537030e-51 | -8.615850e-47 |
| Msa0637600 | Msa1036610 | 0.806877 | 6.643364e-50 | -8.615850e-47 |
| Msa0637600 | Msa1043130 | -0.805879 | 1.078804e-49 | -8.615850e-47 |
| Msa0637600 | Msa1063860 | 0.811567 | 6.561837e-51 | -8.615850e-47 |
| Msa0637600 | Msa1065430 | 0.813060 | 3.098461e-51 | -8.615850e-47 |
| Msa0637600 | Msa1066670 | 0.819765 | 9.778031e-53 | -8.615850e-47 |
| Msa0637600 | Msa1111870 | 0.802998 | 4.299242e-49 | -8.615850e-47 |
| Msa0637600 | Msa1155170 | -0.809918 | 1.492291e-50 | -8.615850e-47 |
| Msa0637600 | Msa1161810 | 0.808612 | 2.843670e-50 | -8.615850e-47 |
| Msa0637600 | Msa1170760 | 0.824566 | 7.528713e-54 | -8.615850e-47 |
| Msa0637600 | Msa1179070 | 0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa0637600 | Msa1183890 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0637600 | Msa1203010 | 0.800284 | 1.549020e-48 | -8.615850e-47 |
| Msa0637600 | Msa1225860 | -0.827942 | 1.183966e-54 | -8.615850e-47 |
| Msa0637600 | Msa1236460 | 0.820608 | 6.268886e-53 | -8.615850e-47 |
| Msa0637600 | Msa1237700 | 0.805664 | 1.196731e-49 | -8.615850e-47 |
| Msa0637600 | Msa1238820 | 0.813466 | 2.523424e-51 | -8.615850e-47 |
| Msa0637600 | Msa1246360 | 0.809968 | 1.455488e-50 | -8.615850e-47 |
| Msa0637600 | Msa1297290 | 0.807860 | 4.112580e-50 | -8.615850e-47 |
| Msa0637600 | Msa1303070 | 0.803052 | 4.189323e-49 | -8.615850e-47 |
| Msa0637600 | Msa1307560 | 0.810638 | 1.043433e-50 | -8.615850e-47 |
| Msa0637600 | Msa1342380 | 0.825048 | 5.797365e-54 | -8.615850e-47 |
| Msa0637600 | Msa1345810 | 0.818273 | 2.136765e-52 | -8.615850e-47 |
| Msa0637600 | Msa1355450 | 0.814690 | 1.354966e-51 | -8.615850e-47 |
| Msa0637600 | Msa1359560 | 0.803188 | 3.926506e-49 | -8.615850e-47 |
| Msa0637600 | Msa1385000 | 0.805871 | 1.082757e-49 | -8.615850e-47 |
| Msa0637600 | Msa1405030 | 0.828705 | 7.749079e-55 | -8.615850e-47 |
| Msa0637600 | Msa1425880 | 0.804777 | 1.835846e-49 | -8.615850e-47 |
| Msa0637600 | Msa1448560 | 0.811801 | 5.838688e-51 | -8.615850e-47 |
| Msa0637600 | Msa1452710 | 0.816207 | 6.227235e-52 | -8.615850e-47 |
| Msa0637600 | Msa1454620 | 0.813821 | 2.108302e-51 | -8.615850e-47 |
| Msa0637600 | Msa1458680 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0127020 | Msa0637600 | 0.805689 | 1.182172e-49 | -8.615850e-47 |
| Msa0169280 | Msa0637600 | 0.806726 | 7.151447e-50 | -8.615850e-47 |
| Msa0172650 | Msa0637600 | 0.808537 | 2.949486e-50 | -8.615850e-47 |
| Msa0189040 | Msa0637600 | 0.804309 | 2.297685e-49 | -8.615850e-47 |
| Msa0189710 | Msa0637600 | 0.842048 | 3.280575e-58 | -8.615850e-47 |
| Msa0212990 | Msa0637600 | 0.801115 | 1.048263e-48 | -8.615850e-47 |
| Msa0221470 | Msa0637600 | 0.809265 | 2.060636e-50 | -8.615850e-47 |
| Msa0225100 | Msa0637600 | 0.800944 | 1.136126e-48 | -8.615850e-47 |
| Msa0225110 | Msa0637600 | 0.834150 | 3.540338e-56 | -8.615850e-47 |
| Msa0225220 | Msa0637600 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0232020 | Msa0637600 | 0.852389 | 4.766702e-61 | -8.615850e-47 |
| Msa0232090 | Msa0637600 | 0.841332 | 5.065978e-58 | -8.615850e-47 |
| Msa0237210 | Msa0637600 | 0.815676 | 8.182876e-52 | -8.615850e-47 |
| Msa0367870 | Msa0637600 | 0.804995 | 1.652938e-49 | -8.615850e-47 |
| Msa0371090 | Msa0637600 | 0.809447 | 1.884064e-50 | -8.615850e-47 |
| Msa0403640 | Msa0637600 | 0.816180 | 6.315835e-52 | -8.615850e-47 |
| Msa0432090 | Msa0637600 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0241140 | Msa0637600 | 0.833674 | 4.657597e-56 | -8.615850e-47 |
| Msa0263060 | Msa0637600 | 0.800227 | 1.590708e-48 | -8.615850e-47 |
| Msa0266200 | Msa0637600 | 0.832268 | 1.041483e-55 | -8.615850e-47 |
| Msa0284350 | Msa0637600 | 0.800519 | 1.387696e-48 | -8.615850e-47 |
| Msa0287780 | Msa0637600 | 0.828341 | 9.487575e-55 | -8.615850e-47 |
| Msa0287870 | Msa0637600 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
| Msa0310090 | Msa0637600 | 0.845820 | 3.199665e-59 | -8.615850e-47 |
| Msa0315690 | Msa0637600 | 0.816107 | 6.558586e-52 | -8.615850e-47 |
| Msa0330340 | Msa0637600 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa0342010 | Msa0637600 | 0.803845 | 2.870507e-49 | -8.615850e-47 |
| Msa0501380 | Msa0637600 | 0.819842 | 9.393140e-53 | -8.615850e-47 |
| Msa0520950 | Msa0637600 | 0.806434 | 8.241575e-50 | -8.615850e-47 |
| Msa0529890 | Msa0637600 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
| Msa0531180 | Msa0637600 | 0.811364 | 7.266334e-51 | -8.615850e-47 |
| Msa0532960 | Msa0637600 | 0.803997 | 2.668432e-49 | -8.615850e-47 |
| Msa0532990 | Msa0637600 | 0.804943 | 1.694723e-49 | -8.615850e-47 |
| Msa0583360 | Msa0637600 | -0.818628 | 1.774918e-52 | -8.615850e-47 |
| Msa0585560 | Msa0637600 | 0.810239 | 1.272514e-50 | -8.615850e-47 |
| Msa0594050 | Msa0637600 | 0.803331 | 3.668956e-49 | -8.615850e-47 |
| Msa0597830 | Msa0637600 | 0.952500 | 2.120900e-110 | -8.615850e-47 |
| Msa0598160 | Msa0637600 | 0.801449 | 8.956792e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637600 | MtrunA17_Chr4g0020741 | 92.857 | 532 | 17 | 1 | 1 | 511 | 1 | 532 | 0.0 | 1002 |
| Msa0637600 | MtrunA17_Chr2g0312901 | 28.406 | 345 | 195 | 10 | 181 | 510 | 21 | 328 | 3.07e-25 | 109 |
| Msa0637600 | MtrunA17_Chr4g0074041 | 27.844 | 334 | 200 | 9 | 183 | 508 | 93 | 393 | 3.63e-23 | 103 |
| Msa0637600 | MtrunA17_Chr3g0123951 | 27.855 | 359 | 210 | 14 | 183 | 511 | 24 | 363 | 8.05e-23 | 100 |
| Msa0637600 | MtrunA17_Chr1g0150541 | 28.342 | 374 | 193 | 16 | 158 | 511 | 169 | 487 | 8.09e-22 | 99.4 |
| Msa0637600 | MtrunA17_Chr6g0458421 | 25.220 | 341 | 203 | 9 | 181 | 510 | 28 | 327 | 1.27e-21 | 98.2 |
| Msa0637600 | MtrunA17_Chr6g0458441 | 24.638 | 345 | 200 | 9 | 181 | 510 | 126 | 425 | 2.59e-21 | 97.8 |
| Msa0637600 | MtrunA17_Chr8g0366721 | 26.271 | 354 | 167 | 13 | 183 | 510 | 213 | 498 | 1.70e-20 | 94.7 |
| Msa0637600 | MtrunA17_Chr5g0411271 | 26.361 | 349 | 182 | 13 | 183 | 510 | 155 | 449 | 1.47e-19 | 92.4 |
| Msa0637600 | MtrunA17_Chr2g0313171 | 27.577 | 359 | 179 | 16 | 181 | 510 | 463 | 769 | 1.22e-18 | 89.7 |
| Msa0637600 | MtrunA17_Chr6g0458431 | 24.198 | 343 | 200 | 9 | 181 | 508 | 93 | 390 | 2.22e-18 | 88.6 |
| Msa0637600 | MtrunA17_Chr8g0365831 | 24.581 | 358 | 182 | 14 | 183 | 510 | 165 | 464 | 7.40e-15 | 77.0 |
| Msa0637600 | MtrunA17_Chr4g0062561 | 25.150 | 334 | 193 | 10 | 183 | 508 | 254 | 538 | 7.37e-14 | 74.7 |
| Msa0637600 | MtrunA17_Chr2g0322211 | 34.711 | 121 | 68 | 4 | 396 | 511 | 748 | 862 | 1.78e-12 | 70.1 |
| Msa0637600 | MtrunA17_Chr7g0255591 | 34.746 | 118 | 74 | 3 | 396 | 511 | 785 | 901 | 5.33e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637600 | AT4G30890.1 | 50.871 | 574 | 196 | 16 | 1 | 511 | 1 | 551 | 1.70e-162 | 472 |
| Msa0637600 | AT4G30890.2 | 50.871 | 574 | 196 | 16 | 1 | 511 | 1 | 551 | 1.70e-162 | 472 |
| Msa0637600 | AT4G30890.3 | 50.871 | 574 | 196 | 16 | 1 | 511 | 1 | 551 | 1.70e-162 | 472 |
| Msa0637600 | AT5G57990.1 | 26.567 | 335 | 202 | 9 | 183 | 508 | 108 | 407 | 2.94e-23 | 104 |
| Msa0637600 | AT3G14400.1 | 26.648 | 349 | 200 | 9 | 181 | 510 | 23 | 334 | 1.60e-22 | 101 |
| Msa0637600 | AT5G65450.2 | 27.299 | 348 | 198 | 12 | 178 | 510 | 344 | 651 | 2.00e-22 | 101 |
| Msa0637600 | AT5G65450.1 | 27.299 | 348 | 198 | 12 | 178 | 510 | 325 | 632 | 2.26e-22 | 101 |
| Msa0637600 | AT4G24560.1 | 28.329 | 353 | 191 | 15 | 178 | 511 | 538 | 847 | 2.27e-21 | 98.6 |
| Msa0637600 | AT5G46740.1 | 25.369 | 339 | 204 | 7 | 183 | 508 | 164 | 466 | 2.41e-21 | 98.2 |
| Msa0637600 | AT2G22310.1 | 28.134 | 359 | 208 | 15 | 183 | 511 | 24 | 362 | 3.05e-21 | 95.9 |
| Msa0637600 | AT4G31670.1 | 28.249 | 354 | 191 | 15 | 178 | 511 | 164 | 474 | 4.34e-21 | 97.4 |
| Msa0637600 | AT4G39910.1 | 26.558 | 369 | 206 | 17 | 183 | 511 | 24 | 367 | 1.38e-20 | 94.0 |
| Msa0637600 | AT1G17110.3 | 26.361 | 349 | 198 | 14 | 178 | 508 | 434 | 741 | 4.49e-20 | 94.7 |
| Msa0637600 | AT1G17110.1 | 26.361 | 349 | 198 | 14 | 178 | 508 | 434 | 741 | 4.49e-20 | 94.7 |
| Msa0637600 | AT1G17110.2 | 26.361 | 349 | 198 | 14 | 178 | 508 | 438 | 745 | 4.75e-20 | 94.4 |
| Msa0637600 | AT2G22310.3 | 26.705 | 352 | 194 | 15 | 197 | 511 | 6 | 330 | 2.52e-17 | 83.6 |
| Msa0637600 | AT5G46740.2 | 26.087 | 276 | 160 | 5 | 241 | 508 | 18 | 257 | 4.15e-17 | 84.7 |
| Msa0637600 | AT5G22030.2 | 35.246 | 122 | 67 | 3 | 396 | 511 | 796 | 911 | 2.44e-13 | 73.2 |
| Msa0637600 | AT5G22030.1 | 35.246 | 122 | 67 | 3 | 396 | 511 | 754 | 869 | 2.84e-13 | 73.2 |
| Msa0637600 | AT4G17895.1 | 23.684 | 342 | 204 | 8 | 183 | 510 | 177 | 475 | 1.05e-12 | 71.2 |
| Msa0637600 | AT2G40930.1 | 35.897 | 117 | 72 | 3 | 396 | 510 | 800 | 915 | 2.50e-12 | 70.1 |
| Msa0637600 | AT2G40930.2 | 35.897 | 117 | 72 | 3 | 396 | 510 | 800 | 915 | 2.50e-12 | 70.1 |
Find 142 sgRNAs with CRISPR-Local
Find 453 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAGCGTCTCCTCTTTC+AGG | 0.120112 | 4_3:+29837038 | Msa0637600:five_prime_UTR |
| CGTGATTCTCAGAAATTTAA+AGG | 0.150466 | 4_3:+29838005 | Msa0637600:CDS |
| TTCACTAGCTCGAAAGAAAT+TGG | 0.154034 | 4_3:+29842979 | Msa0637600:three_prime_UTR |
| CGGTAACCTTCAAGAGTTTC+TGG | 0.156851 | 4_3:-29840347 | None:intergenic |
| GTTACACCAATTGATGAAAA+TGG | 0.235400 | 4_3:+29838161 | Msa0637600:CDS |
| TGGGAGCAGGTGTTACTATT+TGG | 0.239238 | 4_3:+29837816 | Msa0637600:intron |
| CTTTGCTATTGCAACAAATA+AGG | 0.245305 | 4_3:+29842613 | Msa0637600:CDS |
| CTTTCCTCTTGAATTGGTAT+TGG | 0.248503 | 4_3:+29841337 | Msa0637600:CDS |
| GTAACAGCAGATTTATTCTT+TGG | 0.248970 | 4_3:-29839856 | None:intergenic |
| GCAGATCAACTTTAGTTGTT+AGG | 0.272125 | 4_3:+29843103 | Msa0637600:three_prime_UTR |
| TTTATTCCCTCAGAATTAAA+TGG | 0.273600 | 4_3:+29839892 | Msa0637600:CDS |
| TCTTCGTCGATGCTTCTTCT+TGG | 0.274395 | 4_3:+29836944 | Msa0637600:five_prime_UTR |
| TTTGGTGCTTTCGGTGAATT+TGG | 0.281536 | 4_3:-29837969 | None:intergenic |
| CCAGTTTACGAATTTGAGTT+TGG | 0.307610 | 4_3:+29838193 | Msa0637600:CDS |
| TTTCCTCTTGAATTGGTATT+GGG | 0.309419 | 4_3:+29841338 | Msa0637600:CDS |
| ATAAATTCCCAGAGTTAATA+AGG | 0.309476 | 4_3:-29838358 | None:intergenic |
| TTAAATCATTGCATATTTAT+CGG | 0.313727 | 4_3:-29843181 | None:intergenic |
| ATTTAACCAAGACTTGAAAA+AGG | 0.314327 | 4_3:+29838286 | Msa0637600:CDS |
| AGGTGCAATATCATTACTTT+AGG | 0.315233 | 4_3:-29841260 | None:intergenic |
| TATTGTTGCAGTCTTTGTTT+AGG | 0.320992 | 4_3:+29843067 | Msa0637600:three_prime_UTR |
| AATCGCAGCCACCGACCATT+AGG | 0.322141 | 4_3:-29842575 | None:intergenic |
| AGGACATCTTCAAACATAAC+AGG | 0.328529 | 4_3:-29838836 | None:intergenic |
| ATGCGAGTGATTATTCATTA+AGG | 0.330035 | 4_3:+29842783 | Msa0637600:three_prime_UTR |
| CGGAGGACAACTCCAAAGTT+TGG | 0.335704 | 4_3:+29839921 | Msa0637600:CDS |
| GGACAGTCTTCAAGTCTTAA+TGG | 0.340469 | 4_3:+29839778 | Msa0637600:CDS |
| GATATGTTTACCTCAGTATA+TGG | 0.342798 | 4_3:-29841380 | None:intergenic |
| TCACGGAGAGGAGCACTATT+TGG | 0.352711 | 4_3:-29837987 | None:intergenic |
| CCAAACTCAAATTCGTAAAC+TGG | 0.354303 | 4_3:-29838193 | None:intergenic |
| CGTGCACTTTCCTCTTGAAT+TGG | 0.361534 | 4_3:+29841331 | Msa0637600:CDS |
| GAGAAGAATCAGCTGCAATT+TGG | 0.366023 | 4_3:+29837909 | Msa0637600:CDS |
| ATATTGCACCTAATGCGTTT+TGG | 0.371667 | 4_3:+29841272 | Msa0637600:CDS |
| TCAATGGTGTGAACAGCATC+AGG | 0.372539 | 4_3:-29840299 | None:intergenic |
| TGCAACCGTGCAGGCTCTCT+TGG | 0.378354 | 4_3:+29838391 | Msa0637600:CDS |
| TCTTATCACACACTCTAGAT+TGG | 0.380989 | 4_3:-29842826 | None:intergenic |
| GGAGCACTATTTGGTGCTTT+CGG | 0.387557 | 4_3:-29837978 | None:intergenic |
| GGTTACCGAGCATCGGTCTC+TGG | 0.393785 | 4_3:+29840362 | Msa0637600:CDS |
| AAAAGGGAGTAGATATCAAC+AGG | 0.395187 | 4_3:-29842695 | None:intergenic |
| TAAGCAACTTGGTGCTTCCC+TGG | 0.400831 | 4_3:-29841304 | None:intergenic |
| GGAATTTCTGAGCTTTGTAA+TGG | 0.401010 | 4_3:+29839723 | Msa0637600:CDS |
| TGCATAACAGCATGCCCATT+AGG | 0.406025 | 4_3:-29838311 | None:intergenic |
| TCGAGATGGATCAAGCGATA+TGG | 0.420936 | 4_3:-29840269 | None:intergenic |
| TCACTAGCTCGAAAGAAATT+GGG | 0.423231 | 4_3:+29842980 | Msa0637600:three_prime_UTR |
| GCCACCGACCATTAGGGTAC+TGG | 0.426370 | 4_3:-29842568 | None:intergenic |
| TTCTTTAAGTTTACACCGCT+TGG | 0.426766 | 4_3:-29838773 | None:intergenic |
| CAAGGTTTGTGTATAGAGAA+AGG | 0.428549 | 4_3:-29837092 | None:intergenic |
| TGGTAATTCAAAAGCTCAAA+CGG | 0.434595 | 4_3:+29836964 | Msa0637600:five_prime_UTR |
| GAGAAAGGAGGAAAATCAAA+AGG | 0.443748 | 4_3:-29837077 | None:intergenic |
| AAATAAGGTGCTGCATGATC+AGG | 0.444504 | 4_3:+29842628 | Msa0637600:CDS |
| TGCAGCTGATTCTTCTCCAC+AGG | 0.448468 | 4_3:-29837903 | None:intergenic |
| TTCCATAACCAAAACGCATT+AGG | 0.451915 | 4_3:-29841280 | None:intergenic |
| TCCTGCAAAAGCTGAACAAA+AGG | 0.451972 | 4_3:-29838422 | None:intergenic |
| ATCGCAGCCACCGACCATTA+GGG | 0.452783 | 4_3:-29842574 | None:intergenic |
| GACGAATTACTGAAGCTTGA+AGG | 0.453272 | 4_3:+29839757 | Msa0637600:CDS |
| GTGCTTTCGGTGAATTTGGC+AGG | 0.453991 | 4_3:-29837965 | None:intergenic |
| CCTCGAGGCCTTATTAACTC+TGG | 0.457487 | 4_3:+29838350 | Msa0637600:CDS |
| GGTAATTCAAAAGCTCAAAC+GGG | 0.461824 | 4_3:+29836965 | Msa0637600:five_prime_UTR |
| GCTGATGCCCAGTACCCTAA+TGG | 0.462446 | 4_3:+29842560 | Msa0637600:CDS |
| TTACAAAGCTCAGAAATTCC+TGG | 0.463282 | 4_3:-29839720 | None:intergenic |
| GAGTTTCTGGAGCAGAGAAC+AGG | 0.464848 | 4_3:-29840334 | None:intergenic |
| CTTTAGTTATCACCAAACTT+TGG | 0.466105 | 4_3:-29839933 | None:intergenic |
| TTCTGTGGAAGATGATGAAT+GGG | 0.466491 | 4_3:+29839822 | Msa0637600:CDS |
| TTACAGCGTCTCCTCTTTCA+GGG | 0.466795 | 4_3:+29837039 | Msa0637600:five_prime_UTR |
| AAGGAGGAAAATCAAAAGGT+AGG | 0.468850 | 4_3:-29837073 | None:intergenic |
| CATGGAAGGGAGCCTTCAAA+AGG | 0.476899 | 4_3:+29842527 | Msa0637600:CDS |
| AAGAACAAGAAGATGAAGAA+AGG | 0.477988 | 4_3:-29836925 | None:intergenic |
| GTTGCTACAATTACTCATCA+TGG | 0.478854 | 4_3:+29842509 | Msa0637600:CDS |
| CTTCTGTGGAAGATGATGAA+TGG | 0.479192 | 4_3:+29839821 | Msa0637600:CDS |
| TCTGCTCCAGAAACTCTTGA+AGG | 0.487177 | 4_3:+29840341 | Msa0637600:CDS |
| AGGAGGAAAATCAAAAGGTA+GGG | 0.498898 | 4_3:-29837072 | None:intergenic |
| CAAAGTTTGGTGATAACTAA+AGG | 0.501251 | 4_3:+29839934 | Msa0637600:CDS |
| CTTCCTTAGTGCAACCGTGC+AGG | 0.502300 | 4_3:+29838382 | Msa0637600:CDS |
| TTTGCACTAGTGATACTTGA+GGG | 0.507883 | 4_3:-29838110 | None:intergenic |
| AAAATACCATTTAATTCTGA+GGG | 0.508677 | 4_3:-29839898 | None:intergenic |
| TAATCACTCGCATCTTCTCC+AGG | 0.509556 | 4_3:-29842773 | None:intergenic |
| TGCTCATATTGCTGAAGAGA+TGG | 0.514308 | 4_3:-29837161 | None:intergenic |
| TTTATAGTTTCTGTTACTTG+AGG | 0.515498 | 4_3:-29838053 | None:intergenic |
| ACAGAAACTATAAAAGAGAA+TGG | 0.517959 | 4_3:+29838062 | Msa0637600:CDS |
| CTGGAGCAGAGAACAGGTGC+AGG | 0.520052 | 4_3:-29840328 | None:intergenic |
| CTCGAGGCCTTATTAACTCT+GGG | 0.522645 | 4_3:+29838351 | Msa0637600:CDS |
| CCACCGACCATTAGGGTACT+GGG | 0.524640 | 4_3:-29842567 | None:intergenic |
| CAGGTGCAGGGCATCCTCAA+TGG | 0.527009 | 4_3:-29840315 | None:intergenic |
| ACATGTTCACGTCCTAAACT+AGG | 0.527070 | 4_3:-29842907 | None:intergenic |
| AGAACAAGAAGATGAAGAAA+GGG | 0.527840 | 4_3:-29836924 | None:intergenic |
| CAGTATATGGTGAAACAAGC+AGG | 0.532160 | 4_3:-29841367 | None:intergenic |
| TATTGCTGAAGAGATGGAAG+AGG | 0.533935 | 4_3:-29837155 | None:intergenic |
| AGATGAAACCAGATCATTGT+GGG | 0.541732 | 4_3:+29837851 | Msa0637600:CDS |
| TTTGAGTTTGGATGCTTCCG+AGG | 0.542094 | 4_3:+29838205 | Msa0637600:CDS |
| CAAGCGATATGGTTGATTAG+TGG | 0.543313 | 4_3:-29840258 | None:intergenic |
| GAAAATACCATTTAATTCTG+AGG | 0.543985 | 4_3:-29839899 | None:intergenic |
| CTACAATTACTCATCATGGA+AGG | 0.546652 | 4_3:+29842513 | Msa0637600:CDS |
| AGAATAAATCTGCTGTTACA+AGG | 0.547889 | 4_3:+29839860 | Msa0637600:CDS |
| CAGAAATTTAAAGGAGTGAA+CGG | 0.548010 | 4_3:+29838014 | Msa0637600:CDS |
| GAGCCTGCACGGTTGCACTA+AGG | 0.549129 | 4_3:-29838385 | None:intergenic |
| CTTTAAATTTCTGAGAATCA+CGG | 0.550479 | 4_3:-29838004 | None:intergenic |
| TACAAAGCTCAGAAATTCCT+GGG | 0.553730 | 4_3:-29839719 | None:intergenic |
| ATGATGAATGGGAAACAGTA+GGG | 0.553915 | 4_3:+29839833 | Msa0637600:CDS |
| GTGCACGGGCTTAAGCAACT+TGG | 0.554134 | 4_3:-29841315 | None:intergenic |
| CAGCAATATGAGCAATCCTA+AGG | 0.565599 | 4_3:+29837170 | Msa0637600:exon |
| GATGATGAATGGGAAACAGT+AGG | 0.568873 | 4_3:+29839832 | Msa0637600:CDS |
| CTGTAATTGAAGACATGAAG+AGG | 0.569803 | 4_3:-29837022 | None:intergenic |
| TCTCAGGCAAGAAGATGCCC+AGG | 0.569830 | 4_3:+29839702 | Msa0637600:intron |
| GTTCTTCAAACTTTCAGCCT+CGG | 0.573342 | 4_3:-29838222 | None:intergenic |
| TCTTGAAGGTTACCGAGCAT+CGG | 0.578705 | 4_3:+29840355 | Msa0637600:CDS |
| AAGAGCTCGTACCATTCCTA+AGG | 0.579648 | 4_3:+29838448 | Msa0637600:CDS |
| CCGAGCATCGGTCTCTGGAA+AGG | 0.582535 | 4_3:+29840367 | Msa0637600:CDS |
| ATCAACAATCAACACATCAA+AGG | 0.585601 | 4_3:-29843029 | None:intergenic |
| CGACCCAATACCAATTCAAG+AGG | 0.592600 | 4_3:-29841341 | None:intergenic |
| ATGGAAGGGAGCCTTCAAAA+GGG | 0.595602 | 4_3:+29842528 | Msa0637600:CDS |
| TTCAAAAGCTCAAACGGGGA+GGG | 0.595743 | 4_3:+29836970 | Msa0637600:five_prime_UTR |
| AGGATAGACTACCTTAGGAA+TGG | 0.608535 | 4_3:-29838459 | None:intergenic |
| TACAATTACTCATCATGGAA+GGG | 0.609584 | 4_3:+29842514 | Msa0637600:CDS |
| GTTTGCACTAGTGATACTTG+AGG | 0.610703 | 4_3:-29838111 | None:intergenic |
| AGCACTACTAATTTCTCCAT+CGG | 0.616818 | 4_3:+29838086 | Msa0637600:CDS |
| TGCGAGAAATGAAAAGCCTG+TGG | 0.616964 | 4_3:+29837887 | Msa0637600:CDS |
| CCCAGTACCCTAATGGTCGG+TGG | 0.618099 | 4_3:+29842567 | Msa0637600:CDS |
| ATGCCCAGTACCCTAATGGT+CGG | 0.618899 | 4_3:+29842564 | Msa0637600:CDS |
| AATTCAAGAGGAAAGTGCAC+GGG | 0.623483 | 4_3:-29841329 | None:intergenic |
| AGTGATACTTGAGGGACCGA+TGG | 0.623508 | 4_3:-29838102 | None:intergenic |
| ACAAGCCAAGAGAGCCTGCA+CGG | 0.624808 | 4_3:-29838396 | None:intergenic |
| AGAGAGAGAGAAGTTAACAA+AGG | 0.629372 | 4_3:-29836995 | None:intergenic |
| ATTCAAAAGCTCAAACGGGG+AGG | 0.630838 | 4_3:+29836969 | Msa0637600:five_prime_UTR |
| CATCAGGGTGAATGTCGAGA+TGG | 0.631557 | 4_3:-29840283 | None:intergenic |
| CTGTTTGTAGAAAAGAACAT+AGG | 0.634054 | 4_3:-29842651 | None:intergenic |
| TGGAAGAGGAAGATGCAACA+AGG | 0.634962 | 4_3:-29837141 | None:intergenic |
| GCATGCTGTTATGCATGCTA+AGG | 0.640605 | 4_3:+29838319 | Msa0637600:CDS |
| GGTTACGAAAAGACGAAATG+TGG | 0.643377 | 4_3:-29836838 | None:intergenic |
| CCTTTCCAGAGACCGATGCT+CGG | 0.644404 | 4_3:-29840367 | None:intergenic |
| CAATTCAAGAGGAAAGTGCA+CGG | 0.646305 | 4_3:-29841330 | None:intergenic |
| TGATGCTGTTCACACCATTG+AGG | 0.657974 | 4_3:+29840301 | Msa0637600:CDS |
| AAGATGAAACCAGATCATTG+TGG | 0.658086 | 4_3:+29837850 | Msa0637600:CDS |
| TGGAGCAGAGAACAGGTGCA+GGG | 0.664257 | 4_3:-29840327 | None:intergenic |
| GCTAAGGATCTTCAGCCTCG+AGG | 0.673728 | 4_3:+29838335 | Msa0637600:CDS |
| AATTTCTGAGAATCACGGAG+AGG | 0.675867 | 4_3:-29837999 | None:intergenic |
| CAATGGTGTGAACAGCATCA+GGG | 0.677442 | 4_3:-29840298 | None:intergenic |
| GCTTGTTTCACCATATACTG+AGG | 0.678531 | 4_3:+29841370 | Msa0637600:CDS |
| GGTTTGTGTATAGAGAAAGG+AGG | 0.685198 | 4_3:-29837089 | None:intergenic |
| GGACATCTTCAAACATAACA+GGG | 0.689713 | 4_3:-29838835 | None:intergenic |
| GTAATTCAAAAGCTCAAACG+GGG | 0.693530 | 4_3:+29836966 | Msa0637600:five_prime_UTR |
| ACTCAATTTGACATGCCAAG+CGG | 0.702135 | 4_3:+29838758 | Msa0637600:CDS |
| CCAGAGTTAATAAGGCCTCG+AGG | 0.730888 | 4_3:-29838350 | None:intergenic |
| TCATGGTCTAGATAACAAGG+AGG | 0.741433 | 4_3:-29842871 | None:intergenic |
| AAAGGGAGTAGATATCAACA+GGG | 0.750009 | 4_3:-29842694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATAAATAATGATA+TGG | - | chr4_3:29840218-29840237 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTTAATTTTTTCT+TGG | - | chr4_3:29840602-29840621 | None:intergenic | 10.0% |
| !!! | AAAAATTGATATATTTTTTC+AGG | + | chr4_3:29841199-29841218 | Msa0637600:intron | 10.0% |
| !!! | ATTTTAAATTTTTAAGAGTT+TGG | + | chr4_3:29842410-29842429 | Msa0637600:intron | 10.0% |
| !!! | TTGTTTTATTTTGTTTGAAA+TGG | + | chr4_3:29837568-29837587 | Msa0637600:intron | 15.0% |
| !!! | TTATTACTGTGTAATTTTTT+AGG | + | chr4_3:29838697-29838716 | Msa0637600:intron | 15.0% |
| !!! | TATTTATTTTTTTCCTTTTC+AGG | + | chr4_3:29840224-29840243 | Msa0637600:intron | 15.0% |
| !! | GTATTCAAAACTAAATTAAA+GGG | - | chr4_3:29840399-29840418 | None:intergenic | 15.0% |
| !! | TGTATTCAAAACTAAATTAA+AGG | - | chr4_3:29840400-29840419 | None:intergenic | 15.0% |
| !! | GTTTATTTGAAAAGAAAAAA+AGG | - | chr4_3:29840954-29840973 | None:intergenic | 15.0% |
| !!! | TATAGGTTCAATTATATTTT+TGG | + | chr4_3:29841009-29841028 | Msa0637600:intron | 15.0% |
| !! | TAAATCTTAAATGTATGTAA+AGG | - | chr4_3:29841596-29841615 | None:intergenic | 15.0% |
| !! | AAGTAAATAAATACTCTATT+TGG | - | chr4_3:29841938-29841957 | None:intergenic | 15.0% |
| !! | TTAAATCATTGCATATTTAT+CGG | - | chr4_3:29843184-29843203 | None:intergenic | 15.0% |
| !!! | TGTTTTTAGTTGAAAACAAT+TGG | + | chr4_3:29837239-29837258 | Msa0637600:intron | 20.0% |
| !!! | TTTTTAGTTTAATGTTCCTT+TGG | + | chr4_3:29837272-29837291 | Msa0637600:intron | 20.0% |
| !! | TAATCAATTTGAATGTAATC+CGG | + | chr4_3:29837413-29837432 | Msa0637600:intron | 20.0% |
| !! | AAAACAACAAAACATTGAAA+AGG | - | chr4_3:29837555-29837574 | None:intergenic | 20.0% |
| !! | TAAAAAAATGTTGTCAATTG+CGG | - | chr4_3:29837756-29837775 | None:intergenic | 20.0% |
| !!! | AAAATGCTGATTTTGTTTTT+GGG | + | chr4_3:29837791-29837810 | Msa0637600:intron | 20.0% |
| !! | ATATATGTCCATAGAAAATT+GGG | - | chr4_3:29839139-29839158 | None:intergenic | 20.0% |
| !! | AAAACCATTACAGTTTAAAA+TGG | - | chr4_3:29839166-29839185 | None:intergenic | 20.0% |
| !! | TCATGAAAATAATTGAGAAA+TGG | + | chr4_3:29839189-29839208 | Msa0637600:intron | 20.0% |
| !! | GAAATTTATACACAATATTC+AGG | + | chr4_3:29839567-29839586 | Msa0637600:intron | 20.0% |
| !!! | TGTAATTTTTATGATACTCA+TGG | + | chr4_3:29839665-29839684 | Msa0637600:intron | 20.0% |
| !! | AAAATACCATTTAATTCTGA+GGG | - | chr4_3:29839901-29839920 | None:intergenic | 20.0% |
| !!! | TCAGAATTAAATGGTATTTT+CGG | + | chr4_3:29839901-29839920 | Msa0637600:CDS | 20.0% |
| !!! | TACAATTTTCAAAAGGAATA+AGG | + | chr4_3:29840451-29840470 | Msa0637600:intron | 20.0% |
| !!! | TAATTTTTTCTTGGTTTTGT+GGG | - | chr4_3:29840593-29840612 | None:intergenic | 20.0% |
| !!! | TTAATTTTTTCTTGGTTTTG+TGG | - | chr4_3:29840594-29840613 | None:intergenic | 20.0% |
| !! | AATAGATATGATATCAACTT+CGG | - | chr4_3:29841055-29841074 | None:intergenic | 20.0% |
| !!! | AATTGATATATTTTTTCAGG+CGG | + | chr4_3:29841202-29841221 | Msa0637600:intron | 20.0% |
| !! | GAAGATCTAATTAAAAAGAA+TGG | + | chr4_3:29841742-29841761 | Msa0637600:intron | 20.0% |
| !! | ATCTAATTAAAAAGAATGGA+TGG | + | chr4_3:29841746-29841765 | Msa0637600:intron | 20.0% |
| !! | ACCTGTTAAATTACATTTAT+TGG | + | chr4_3:29841982-29842001 | Msa0637600:intron | 20.0% |
| !!! | ATTTAAAATTACTATTCTGC+AGG | - | chr4_3:29842399-29842418 | None:intergenic | 20.0% |
| !! | AAAAACTATCTTGTAAGATA+GGG | + | chr4_3:29842728-29842747 | Msa0637600:three_prime_UTR | 20.0% |
| !!! | AGACAATTTTGTTTTCGTTT+TGG | - | chr4_3:29836879-29836898 | None:intergenic | 25.0% |
| ! | AATTGAAGAGAATGAAAAAG+AGG | - | chr4_3:29837119-29837138 | None:intergenic | 25.0% |
| ! | ACATGAAAATAAGCGAAAAA+TGG | - | chr4_3:29837198-29837217 | None:intergenic | 25.0% |
| ! | ACAATAACAAAACCCTAATT+CGG | - | chr4_3:29837393-29837412 | None:intergenic | 25.0% |
| ! | AATCAATTTGAATGTAATCC+GGG | + | chr4_3:29837414-29837433 | Msa0637600:intron | 25.0% |
| !! | TAGATTAACATTTTCTCCTT+CGG | - | chr4_3:29837511-29837530 | None:intergenic | 25.0% |
| ! | TATATTCTCATATGTAAGTC+CGG | + | chr4_3:29837605-29837624 | Msa0637600:intron | 25.0% |
| !! | AAATGCTATTTAGTACAAAG+TGG | + | chr4_3:29837686-29837705 | Msa0637600:intron | 25.0% |
| ! | AAAAAAATGTTGTCAATTGC+GGG | - | chr4_3:29837755-29837774 | None:intergenic | 25.0% |
| !!! | GAAAATGCTGATTTTGTTTT+TGG | + | chr4_3:29837790-29837809 | Msa0637600:intron | 25.0% |
| !! | CTTTAAATTTCTGAGAATCA+CGG | - | chr4_3:29838007-29838026 | None:intergenic | 25.0% |
| !! | TTTATAGTTTCTGTTACTTG+AGG | - | chr4_3:29838056-29838075 | None:intergenic | 25.0% |
| ! | ACAGAAACTATAAAAGAGAA+TGG | + | chr4_3:29838062-29838081 | Msa0637600:CDS | 25.0% |
| ! | ATTTAACCAAGACTTGAAAA+AGG | + | chr4_3:29838286-29838305 | Msa0637600:CDS | 25.0% |
| ! | ATAAATTCCCAGAGTTAATA+AGG | - | chr4_3:29838361-29838380 | None:intergenic | 25.0% |
| !! | TTGATCTTTTCTGATTACAA+GGG | - | chr4_3:29838660-29838679 | None:intergenic | 25.0% |
| !! | TTTGATCTTTTCTGATTACA+AGG | - | chr4_3:29838661-29838680 | None:intergenic | 25.0% |
| !!! | TACTGTGTAATTTTTTAGGT+TGG | + | chr4_3:29838701-29838720 | Msa0637600:intron | 25.0% |
| ! | CATATATGTCCATAGAAAAT+TGG | - | chr4_3:29839140-29839159 | None:intergenic | 25.0% |
| !! | ATTTTCTATGGACATATATG+TGG | + | chr4_3:29839140-29839159 | Msa0637600:intron | 25.0% |
| ! | TGAGAAATGGTTATGTTTAT+AGG | + | chr4_3:29839202-29839221 | Msa0637600:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr4_3:29839243-29839262 | None:intergenic | 25.0% |
| ! | TAGAAACTCTCAGTATATAT+GGG | - | chr4_3:29839365-29839384 | None:intergenic | 25.0% |
| ! | ATAGAAACTCTCAGTATATA+TGG | - | chr4_3:29839366-29839385 | None:intergenic | 25.0% |
| ! | ATATATACTGAGAGTTTCTA+TGG | + | chr4_3:29839365-29839384 | Msa0637600:intron | 25.0% |
| ! | TTGAGTAGAAAAGCTATTAA+AGG | - | chr4_3:29839473-29839492 | None:intergenic | 25.0% |
| ! | AACAAGAACATATAAGAGAA+AGG | - | chr4_3:29839505-29839524 | None:intergenic | 25.0% |
| ! | TTTATTCCCTCAGAATTAAA+TGG | + | chr4_3:29839892-29839911 | Msa0637600:CDS | 25.0% |
| ! | GAAAATACCATTTAATTCTG+AGG | - | chr4_3:29839902-29839921 | None:intergenic | 25.0% |
| !! | AAATTTTACAACATCTTGGT+GGG | - | chr4_3:29840021-29840040 | None:intergenic | 25.0% |
| !! | AAAATTTTACAACATCTTGG+TGG | - | chr4_3:29840022-29840041 | None:intergenic | 25.0% |
| !! | ACGAAAATTTTACAACATCT+TGG | - | chr4_3:29840025-29840044 | None:intergenic | 25.0% |
| !! | TAGCACTTACAATTTTCAAA+AGG | + | chr4_3:29840444-29840463 | Msa0637600:intron | 25.0% |
| ! | CAAAGCTAATACTTAAATTG+AGG | - | chr4_3:29840797-29840816 | None:intergenic | 25.0% |
| ! | CAAAGCTAATACTTAAATTG+AGG | - | chr4_3:29840797-29840816 | None:intergenic | 25.0% |
| ! | AGCTAGAAATAATACTCAAA+GGG | + | chr4_3:29840913-29840932 | Msa0637600:intron | 25.0% |
| !! | GAAAAAAAGGTATATAAAGC+AGG | - | chr4_3:29840941-29840960 | None:intergenic | 25.0% |
| ! | TCATATCTATTACTAAGATG+TGG | + | chr4_3:29841064-29841083 | Msa0637600:intron | 25.0% |
| !!! | ATTGATATATTTTTTCAGGC+GGG | + | chr4_3:29841203-29841222 | Msa0637600:intron | 25.0% |
| ! | TCAATCAAATAACTTTCTCT+TGG | + | chr4_3:29841432-29841451 | Msa0637600:intron | 25.0% |
| ! | TAATTCCCACGAAAAAAATT+AGG | - | chr4_3:29841533-29841552 | None:intergenic | 25.0% |
| !!! | CTCTAATCAAATTGCTTTTA+AGG | + | chr4_3:29841616-29841635 | Msa0637600:intron | 25.0% |
| ! | TAAGGCTTCACAAAATAATT+AGG | + | chr4_3:29841634-29841653 | Msa0637600:intron | 25.0% |
| !!! | CTTTTTAATTAGATCTTCCA+GGG | - | chr4_3:29841740-29841759 | None:intergenic | 25.0% |
| !!! | TCTTTTTAATTAGATCTTCC+AGG | - | chr4_3:29841741-29841760 | None:intergenic | 25.0% |
| !!! | TGCATTGATTGAAACTATAT+TGG | + | chr4_3:29841823-29841842 | Msa0637600:intron | 25.0% |
| ! | GCCAATAAATGTAATTTAAC+AGG | - | chr4_3:29841986-29842005 | None:intergenic | 25.0% |
| ! | CAGTTTATTAGTTGTTAAGT+TGG | - | chr4_3:29842176-29842195 | None:intergenic | 25.0% |
| !!! | ACCAAATATGATAATGCTTT+TGG | + | chr4_3:29842323-29842342 | Msa0637600:intron | 25.0% |
| !!! | CCAAATATGATAATGCTTTT+GGG | + | chr4_3:29842324-29842343 | Msa0637600:intron | 25.0% |
| ! | GTAATGATTGAAAGACATAA+TGG | + | chr4_3:29842443-29842462 | Msa0637600:intron | 25.0% |
| ! | GAAAAACTATCTTGTAAGAT+AGG | + | chr4_3:29842727-29842746 | Msa0637600:three_prime_UTR | 25.0% |
| !!! | TTTTCGTTTTGGTTTTTGAG+GGG | - | chr4_3:29836868-29836887 | None:intergenic | 30.0% |
| !!! | GTTTTCGTTTTGGTTTTTGA+GGG | - | chr4_3:29836869-29836888 | None:intergenic | 30.0% |
| !!! | TGTTTTCGTTTTGGTTTTTG+AGG | - | chr4_3:29836870-29836889 | None:intergenic | 30.0% |
| AGAACAAGAAGATGAAGAAA+GGG | - | chr4_3:29836927-29836946 | None:intergenic | 30.0% | |
| AAGAACAAGAAGATGAAGAA+AGG | - | chr4_3:29836928-29836947 | None:intergenic | 30.0% | |
| TGGTAATTCAAAAGCTCAAA+CGG | + | chr4_3:29836964-29836983 | Msa0637600:five_prime_UTR | 30.0% | |
| ! | AAATCAAAAGGTAGGGTTTT+TGG | - | chr4_3:29837068-29837087 | None:intergenic | 30.0% |
| AGTTGAAAACAATTGGTCAA+AGG | + | chr4_3:29837246-29837265 | Msa0637600:intron | 30.0% | |
| AAATAACAAGCTCAAACCAA+AGG | - | chr4_3:29837291-29837310 | None:intergenic | 30.0% | |
| !!! | TGGTTTGAGCTTGTTATTTT+TGG | + | chr4_3:29837292-29837311 | Msa0637600:intron | 30.0% |
| CTTGTGATGAATCATGAATT+AGG | + | chr4_3:29837363-29837382 | Msa0637600:intron | 30.0% | |
| TGAATTAGGAATACCGAATT+AGG | + | chr4_3:29837377-29837396 | Msa0637600:intron | 30.0% | |
| GAATTAGGAATACCGAATTA+GGG | + | chr4_3:29837378-29837397 | Msa0637600:intron | 30.0% | |
| ATCAATTTGAATGTAATCCG+GGG | + | chr4_3:29837415-29837434 | Msa0637600:intron | 30.0% | |
| !!! | CTGATTTTGTTTTTGGGTTT+GGG | + | chr4_3:29837797-29837816 | Msa0637600:intron | 30.0% |
| CGTGATTCTCAGAAATTTAA+AGG | + | chr4_3:29838005-29838024 | Msa0637600:CDS | 30.0% | |
| CAGAAATTTAAAGGAGTGAA+CGG | + | chr4_3:29838014-29838033 | Msa0637600:CDS | 30.0% | |
| GTTACACCAATTGATGAAAA+TGG | + | chr4_3:29838161-29838180 | Msa0637600:CDS | 30.0% | |
| TTGAAGAACGTGTTCAAAAA+TGG | + | chr4_3:29838236-29838255 | Msa0637600:CDS | 30.0% | |
| !!! | GATACAGATTCTTTTGAGTT+TGG | + | chr4_3:29838800-29838819 | Msa0637600:CDS | 30.0% |
| ! | TGTCCTGAAAAATTTTACTC+CGG | + | chr4_3:29838853-29838872 | Msa0637600:intron | 30.0% |
| AATTAAATTGTCACCAACCT+TGG | - | chr4_3:29838905-29838924 | None:intergenic | 30.0% | |
| TTCGACTAAAAAAGTGGTTA+TGG | - | chr4_3:29839039-29839058 | None:intergenic | 30.0% | |
| AATCACAATCAGTATGTTTC+TGG | + | chr4_3:29839080-29839099 | Msa0637600:intron | 30.0% | |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr4_3:29839244-29839263 | None:intergenic | 30.0% |
| TTATAGCAACATACACATCA+AGG | + | chr4_3:29839264-29839283 | Msa0637600:intron | 30.0% | |
| !!! | TTAGAAGCCCTCTTTTTTTT+AGG | + | chr4_3:29839426-29839445 | Msa0637600:intron | 30.0% |
| GCAAACTCCTAAAAAAAAGA+GGG | - | chr4_3:29839436-29839455 | None:intergenic | 30.0% | |
| TGCAAACTCCTAAAAAAAAG+AGG | - | chr4_3:29839437-29839456 | None:intergenic | 30.0% | |
| GTATAAATTTCGAGACATGA+TGG | - | chr4_3:29839558-29839577 | None:intergenic | 30.0% | |
| TTTCTTAGGTATGATGTGAT+TGG | + | chr4_3:29839628-29839647 | Msa0637600:intron | 30.0% | |
| !!! | ATCTTTTCTAGTTTCTTCTG+TGG | + | chr4_3:29839807-29839826 | Msa0637600:CDS | 30.0% |
| GTAACAGCAGATTTATTCTT+TGG | - | chr4_3:29839859-29839878 | None:intergenic | 30.0% | |
| AGAATAAATCTGCTGTTACA+AGG | + | chr4_3:29839860-29839879 | Msa0637600:CDS | 30.0% | |
| ! | GAATTAAATGGTATTTTCGG+AGG | + | chr4_3:29839904-29839923 | Msa0637600:CDS | 30.0% |
| CTTTAGTTATCACCAAACTT+TGG | - | chr4_3:29839936-29839955 | None:intergenic | 30.0% | |
| ! | CAAAGTTTGGTGATAACTAA+AGG | + | chr4_3:29839934-29839953 | Msa0637600:CDS | 30.0% |
| ATAAAAAATGGCAATGAAGG+GGG | - | chr4_3:29840136-29840155 | None:intergenic | 30.0% | |
| GATAAAAAATGGCAATGAAG+GGG | - | chr4_3:29840137-29840156 | None:intergenic | 30.0% | |
| CGATAAAAAATGGCAATGAA+GGG | - | chr4_3:29840138-29840157 | None:intergenic | 30.0% | |
| !!! | CCTTCATTGCCATTTTTTAT+CGG | + | chr4_3:29840136-29840155 | Msa0637600:intron | 30.0% |
| TTCAAAAGGAATAAGGACAA+TGG | + | chr4_3:29840458-29840477 | Msa0637600:intron | 30.0% | |
| GTAAGAAATGCCAACTATTT+AGG | - | chr4_3:29840520-29840539 | None:intergenic | 30.0% | |
| TTTCTTACTCGAAAAAGTCT+TGG | + | chr4_3:29840532-29840551 | Msa0637600:intron | 30.0% | |
| ! | ATACCCAACACTTCAATTTT+AGG | + | chr4_3:29840563-29840582 | Msa0637600:intron | 30.0% |
| ! | ATACCCAACACTTCAATTTT+GGG | - | chr4_3:29840563-29840582 | None:intergenic | 30.0% |
| AATACTTAAATTGAGGTAGG+TGG | - | chr4_3:29840790-29840809 | None:intergenic | 30.0% | |
| GCTAATACTTAAATTGAGGT+AGG | - | chr4_3:29840793-29840812 | None:intergenic | 30.0% | |
| AATACTTAAATTGAGGTAGG+TGG | - | chr4_3:29840790-29840809 | None:intergenic | 30.0% | |
| GCTAATACTTAAATTGAGGT+AGG | - | chr4_3:29840793-29840812 | None:intergenic | 30.0% | |
| GAGCTAGAAATAATACTCAA+AGG | + | chr4_3:29840912-29840931 | Msa0637600:intron | 30.0% | |
| GCTAGAAATAATACTCAAAG+GGG | + | chr4_3:29840914-29840933 | Msa0637600:intron | 30.0% | |
| TCGGTCTAACAATAACATAA+AGG | - | chr4_3:29841036-29841055 | None:intergenic | 30.0% | |
| TGATATCAACTACTAAGATG+TGG | - | chr4_3:29841108-29841127 | None:intergenic | 30.0% | |
| !!! | TTGATATATTTTTTCAGGCG+GGG | + | chr4_3:29841204-29841223 | Msa0637600:intron | 30.0% |
| AGGTGCAATATCATTACTTT+AGG | - | chr4_3:29841263-29841282 | None:intergenic | 30.0% | |
| TTTCCTCTTGAATTGGTATT+GGG | + | chr4_3:29841338-29841357 | Msa0637600:CDS | 30.0% | |
| GATATGTTTACCTCAGTATA+TGG | - | chr4_3:29841383-29841402 | None:intergenic | 30.0% | |
| ! | GATTTTCAAAATGCAGTAAC+TGG | - | chr4_3:29841414-29841433 | None:intergenic | 30.0% |
| !!! | TACACTCCTAATTTTTTTCG+TGG | + | chr4_3:29841524-29841543 | Msa0637600:intron | 30.0% |
| !!! | ACACTCCTAATTTTTTTCGT+GGG | + | chr4_3:29841525-29841544 | Msa0637600:intron | 30.0% |
| ATTGAAACTATATTGGCCAA+GGG | + | chr4_3:29841830-29841849 | Msa0637600:intron | 30.0% | |
| ! | CTATTTGGTGAAAAAACTTG+TGG | - | chr4_3:29841923-29841942 | None:intergenic | 30.0% |
| !!! | TTACTTTTTGAATGCTTCCT+TGG | + | chr4_3:29841952-29841971 | Msa0637600:intron | 30.0% |
| CTAACCAAAAAAAATCTGCT+GGG | + | chr4_3:29842204-29842223 | Msa0637600:intron | 30.0% | |
| !! | CCCAAAAGCATTATCATATT+TGG | - | chr4_3:29842327-29842346 | None:intergenic | 30.0% |
| TACAATTACTCATCATGGAA+GGG | + | chr4_3:29842514-29842533 | Msa0637600:CDS | 30.0% | |
| !! | CTTTGCTATTGCAACAAATA+AGG | + | chr4_3:29842613-29842632 | Msa0637600:CDS | 30.0% |
| CTGTTTGTAGAAAAGAACAT+AGG | - | chr4_3:29842654-29842673 | None:intergenic | 30.0% | |
| ATGCGAGTGATTATTCATTA+AGG | + | chr4_3:29842783-29842802 | Msa0637600:three_prime_UTR | 30.0% | |
| ! | TTTTCATGGTCTAGATAACA+AGG | - | chr4_3:29842877-29842896 | None:intergenic | 30.0% |
| ATCAACAATCAACACATCAA+AGG | - | chr4_3:29843032-29843051 | None:intergenic | 30.0% | |
| ! | TATTGTTGCAGTCTTTGTTT+AGG | + | chr4_3:29843067-29843086 | Msa0637600:three_prime_UTR | 30.0% |
| !!! | TTTTGGTTTTTGAGGGGTTA+GGG | - | chr4_3:29836862-29836881 | None:intergenic | 35.0% |
| GGTAATTCAAAAGCTCAAAC+GGG | + | chr4_3:29836965-29836984 | Msa0637600:five_prime_UTR | 35.0% | |
| GTAATTCAAAAGCTCAAACG+GGG | + | chr4_3:29836966-29836985 | Msa0637600:five_prime_UTR | 35.0% | |
| AGAGAGAGAGAAGTTAACAA+AGG | - | chr4_3:29836998-29837017 | None:intergenic | 35.0% | |
| CTGTAATTGAAGACATGAAG+AGG | - | chr4_3:29837025-29837044 | None:intergenic | 35.0% | |
| AGGAGGAAAATCAAAAGGTA+GGG | - | chr4_3:29837075-29837094 | None:intergenic | 35.0% | |
| AAGGAGGAAAATCAAAAGGT+AGG | - | chr4_3:29837076-29837095 | None:intergenic | 35.0% | |
| GAGAAAGGAGGAAAATCAAA+AGG | - | chr4_3:29837080-29837099 | None:intergenic | 35.0% | |
| CAAGGTTTGTGTATAGAGAA+AGG | - | chr4_3:29837095-29837114 | None:intergenic | 35.0% | |
| AGAGAATGAAAAAGAGGACA+AGG | - | chr4_3:29837113-29837132 | None:intergenic | 35.0% | |
| TAAGCGAAAAATGGAACCTT+AGG | - | chr4_3:29837189-29837208 | None:intergenic | 35.0% | |
| !!! | GCTGATTTTGTTTTTGGGTT+TGG | + | chr4_3:29837796-29837815 | Msa0637600:intron | 35.0% |
| AAGATGAAACCAGATCATTG+TGG | + | chr4_3:29837850-29837869 | Msa0637600:CDS | 35.0% | |
| AGATGAAACCAGATCATTGT+GGG | + | chr4_3:29837851-29837870 | Msa0637600:CDS | 35.0% | |
| !!! | CTTTTTTACCCACAATGATC+TGG | - | chr4_3:29837862-29837881 | None:intergenic | 35.0% |
| AGCACTACTAATTTCTCCAT+CGG | + | chr4_3:29838086-29838105 | Msa0637600:CDS | 35.0% | |
| TTTGCACTAGTGATACTTGA+GGG | - | chr4_3:29838113-29838132 | None:intergenic | 35.0% | |
| ! | GCAGTACCATTTTCATCAAT+TGG | - | chr4_3:29838170-29838189 | None:intergenic | 35.0% |
| CCAAACTCAAATTCGTAAAC+TGG | - | chr4_3:29838196-29838215 | None:intergenic | 35.0% | |
| ! | CCAGTTTACGAATTTGAGTT+TGG | + | chr4_3:29838193-29838212 | Msa0637600:CDS | 35.0% |
| AACGTGTTCAAAAATGGTAG+TGG | + | chr4_3:29838242-29838261 | Msa0637600:CDS | 35.0% | |
| !! | ACTTGAAAAAGGCACCTAAT+GGG | + | chr4_3:29838297-29838316 | Msa0637600:CDS | 35.0% |
| ! | TCAGCAAATGCTTTTAGTGT+GGG | - | chr4_3:29838731-29838750 | None:intergenic | 35.0% |
| ! | TTCTTTAAGTTTACACCGCT+TGG | - | chr4_3:29838776-29838795 | None:intergenic | 35.0% |
| GGACATCTTCAAACATAACA+GGG | - | chr4_3:29838838-29838857 | None:intergenic | 35.0% | |
| AGGACATCTTCAAACATAAC+AGG | - | chr4_3:29838839-29838858 | None:intergenic | 35.0% | |
| ! | CATCCGGAGTAAAATTTTTC+AGG | - | chr4_3:29838859-29838878 | None:intergenic | 35.0% |
| ! | TATCTGAAAAGTCTTGTCCT+GGG | - | chr4_3:29839008-29839027 | None:intergenic | 35.0% |
| ! | ATATCTGAAAAGTCTTGTCC+TGG | - | chr4_3:29839009-29839028 | None:intergenic | 35.0% |
| CAACGATTCGACTAAAAAAG+TGG | - | chr4_3:29839045-29839064 | None:intergenic | 35.0% | |
| TGATTGTGATTGTGATCTAG+AGG | - | chr4_3:29839071-29839090 | None:intergenic | 35.0% | |
| CCATAGAAAATTGGGCAATT+AGG | - | chr4_3:29839131-29839150 | None:intergenic | 35.0% | |
| ! | CCTAATTGCCCAATTTTCTA+TGG | + | chr4_3:29839128-29839147 | Msa0637600:intron | 35.0% |
| !! | GTGGCCATTTTAAACTGTAA+TGG | + | chr4_3:29839159-29839178 | Msa0637600:intron | 35.0% |
| !!! | ACGCCCACTTATTTTTTAGA+AGG | + | chr4_3:29839237-29839256 | Msa0637600:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr4_3:29839324-29839343 | Msa0637600:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr4_3:29839330-29839349 | None:intergenic | 35.0% |
| ! | TGCAATGCACTCATTTTCTT+AGG | + | chr4_3:29839614-29839633 | Msa0637600:intron | 35.0% |
| ! | GATGTGATTGGTTGTGATAT+TGG | + | chr4_3:29839640-29839659 | Msa0637600:intron | 35.0% |
| TACAAAGCTCAGAAATTCCT+GGG | - | chr4_3:29839722-29839741 | None:intergenic | 35.0% | |
| TTACAAAGCTCAGAAATTCC+TGG | - | chr4_3:29839723-29839742 | None:intergenic | 35.0% | |
| ! | GGAATTTCTGAGCTTTGTAA+TGG | + | chr4_3:29839723-29839742 | Msa0637600:CDS | 35.0% |
| TTCTGTGGAAGATGATGAAT+GGG | + | chr4_3:29839822-29839841 | Msa0637600:CDS | 35.0% | |
| ATGATGAATGGGAAACAGTA+GGG | + | chr4_3:29839833-29839852 | Msa0637600:CDS | 35.0% | |
| ! | TTGGTGATAACTAAAGGTAC+AGG | + | chr4_3:29839940-29839959 | Msa0637600:intron | 35.0% |
| TTACAGCAAGGGAAAAAATG+TGG | - | chr4_3:29840109-29840128 | None:intergenic | 35.0% | |
| CCGATAAAAAATGGCAATGA+AGG | - | chr4_3:29840139-29840158 | None:intergenic | 35.0% | |
| !!! | CCATTTTTTATCGGAGCTTT+GGG | + | chr4_3:29840145-29840164 | Msa0637600:intron | 35.0% |
| TTACTCGAAAAAGTCTTGGT+TGG | + | chr4_3:29840536-29840555 | Msa0637600:intron | 35.0% | |
| TACTCGAAAAAGTCTTGGTT+GGG | + | chr4_3:29840537-29840556 | Msa0637600:intron | 35.0% | |
| ! | GTGCCTAAAATTGAAGTGTT+GGG | - | chr4_3:29840569-29840588 | None:intergenic | 35.0% |
| TGTGCCTAAAATTGAAGTGT+TGG | - | chr4_3:29840570-29840589 | None:intergenic | 35.0% | |
| ! | CATACCCAACACTTCAATTT+TGG | - | chr4_3:29840562-29840581 | None:intergenic | 35.0% |
| AAGAAGAGAAAGTCTTGGTT+GGG | - | chr4_3:29840723-29840742 | None:intergenic | 35.0% | |
| TAAGAAGAGAAAGTCTTGGT+TGG | - | chr4_3:29840724-29840743 | None:intergenic | 35.0% | |
| AGAGTAAGAAGAGAAAGTCT+TGG | - | chr4_3:29840728-29840747 | None:intergenic | 35.0% | |
| AAGACTTTCTCTTCTTACTC+TGG | + | chr4_3:29840727-29840746 | Msa0637600:intron | 35.0% | |
| AGACTTTCTCTTCTTACTCT+GGG | + | chr4_3:29840728-29840747 | Msa0637600:intron | 35.0% | |
| ! | TGTTAGGTGTCATATTTGGT+AGG | + | chr4_3:29840752-29840771 | Msa0637600:intron | 35.0% |
| ! | TGCAGATAAAGGTATGAACT+GGG | - | chr4_3:29840879-29840898 | None:intergenic | 35.0% |
| ! | ATGCAGATAAAGGTATGAAC+TGG | - | chr4_3:29840880-29840899 | None:intergenic | 35.0% |
| TACTAGACAGCAATGTACTT+TGG | + | chr4_3:29841141-29841160 | Msa0637600:intron | 35.0% | |
| ! | ATATTGCACCTAATGCGTTT+TGG | + | chr4_3:29841272-29841291 | Msa0637600:CDS | 35.0% |
| TTCCATAACCAAAACGCATT+AGG | - | chr4_3:29841283-29841302 | None:intergenic | 35.0% | |
| CTTTCCTCTTGAATTGGTAT+TGG | + | chr4_3:29841337-29841356 | Msa0637600:CDS | 35.0% | |
| TGGATTGTGATGATAAATGC+TGG | + | chr4_3:29841452-29841471 | Msa0637600:intron | 35.0% | |
| TGTACCATTGAGAATAAAGC+AGG | - | chr4_3:29841508-29841527 | None:intergenic | 35.0% | |
| TTCGTGGGAATTAAATTCAC+AGG | + | chr4_3:29841540-29841559 | Msa0637600:intron | 35.0% | |
| CGTCACATAATTTGAACGAA+AGG | - | chr4_3:29841664-29841683 | None:intergenic | 35.0% | |
| GATTGAAACTATATTGGCCA+AGG | + | chr4_3:29841829-29841848 | Msa0637600:intron | 35.0% | |
| GGCTCAATTGATAAGTTACT+TGG | + | chr4_3:29842003-29842022 | Msa0637600:intron | 35.0% | |
| !!! | CCAGCAGATTTTTTTTGGTT+AGG | - | chr4_3:29842206-29842225 | None:intergenic | 35.0% |
| CCTAACCAAAAAAAATCTGC+TGG | + | chr4_3:29842203-29842222 | Msa0637600:intron | 35.0% | |
| ! | TTAAGAGTTTGGAGTCTTGA+TGG | + | chr4_3:29842421-29842440 | Msa0637600:intron | 35.0% |
| !! | ACTCGTTTTTATTCTTCTGC+AGG | + | chr4_3:29842469-29842488 | Msa0637600:intron | 35.0% |
| !! | CTCGTTTTTATTCTTCTGCA+GGG | + | chr4_3:29842470-29842489 | Msa0637600:intron | 35.0% |
| GTTGCTACAATTACTCATCA+TGG | + | chr4_3:29842509-29842528 | Msa0637600:CDS | 35.0% | |
| CTACAATTACTCATCATGGA+AGG | + | chr4_3:29842513-29842532 | Msa0637600:CDS | 35.0% | |
| AAAGGGAGTAGATATCAACA+GGG | - | chr4_3:29842697-29842716 | None:intergenic | 35.0% | |
| AAAAGGGAGTAGATATCAAC+AGG | - | chr4_3:29842698-29842717 | None:intergenic | 35.0% | |
| ! | GTTTTTCTCCAAGTGCAAAA+GGG | - | chr4_3:29842714-29842733 | None:intergenic | 35.0% |
| ! | AGTTTTTCTCCAAGTGCAAA+AGG | - | chr4_3:29842715-29842734 | None:intergenic | 35.0% |
| ! | CAGTTGATTAATGTTTTGCC+TGG | + | chr4_3:29842755-29842774 | Msa0637600:three_prime_UTR | 35.0% |
| TCTTATCACACACTCTAGAT+TGG | - | chr4_3:29842829-29842848 | None:intergenic | 35.0% | |
| ! | TAGGACTGCAAAACTTTTCA+TGG | - | chr4_3:29842891-29842910 | None:intergenic | 35.0% |
| ! | AAGTTTTGCAGTCCTAGTTT+AGG | + | chr4_3:29842895-29842914 | Msa0637600:three_prime_UTR | 35.0% |
| TTCACTAGCTCGAAAGAAAT+TGG | + | chr4_3:29842979-29842998 | Msa0637600:three_prime_UTR | 35.0% | |
| TCACTAGCTCGAAAGAAATT+GGG | + | chr4_3:29842980-29842999 | Msa0637600:three_prime_UTR | 35.0% | |
| GCAGATCAACTTTAGTTGTT+AGG | + | chr4_3:29843103-29843122 | Msa0637600:three_prime_UTR | 35.0% | |
| GGTTACGAAAAGACGAAATG+TGG | - | chr4_3:29836841-29836860 | None:intergenic | 40.0% | |
| !!! | GTTTTGGTTTTTGAGGGGTT+AGG | - | chr4_3:29836863-29836882 | None:intergenic | 40.0% |
| GGTTTGTGTATAGAGAAAGG+AGG | - | chr4_3:29837092-29837111 | None:intergenic | 40.0% | |
| TATTGCTGAAGAGATGGAAG+AGG | - | chr4_3:29837158-29837177 | None:intergenic | 40.0% | |
| TGCTCATATTGCTGAAGAGA+TGG | - | chr4_3:29837164-29837183 | None:intergenic | 40.0% | |
| CAGCAATATGAGCAATCCTA+AGG | + | chr4_3:29837170-29837189 | Msa0637600:exon | 40.0% | |
| ATTTGAATGTAATCCGGGGT+TGG | + | chr4_3:29837419-29837438 | Msa0637600:intron | 40.0% | |
| TTTGAATGTAATCCGGGGTT+GGG | + | chr4_3:29837420-29837439 | Msa0637600:intron | 40.0% | |
| !!! | AGCTCAACTGGTTTTAGCTA+AGG | + | chr4_3:29837444-29837463 | Msa0637600:intron | 40.0% |
| !!! | GCTCAACTGGTTTTAGCTAA+GGG | + | chr4_3:29837445-29837464 | Msa0637600:intron | 40.0% |
| !!! | CTGGTTTTAGCTAAGGGAAA+AGG | + | chr4_3:29837451-29837470 | Msa0637600:intron | 40.0% |
| TTAGCTAAGGGAAAAGGAGT+TGG | + | chr4_3:29837457-29837476 | Msa0637600:intron | 40.0% | |
| ! | TTAACATTTTCTCCTTCGGC+CGG | - | chr4_3:29837507-29837526 | None:intergenic | 40.0% |
| AGCATTTCGCAGAACAATAG+TGG | - | chr4_3:29837673-29837692 | None:intergenic | 40.0% | |
| GAGAAGAATCAGCTGCAATT+TGG | + | chr4_3:29837909-29837928 | Msa0637600:CDS | 40.0% | |
| !! | TTTGGTGCTTTCGGTGAATT+TGG | - | chr4_3:29837972-29837991 | None:intergenic | 40.0% |
| ! | AATTTCTGAGAATCACGGAG+AGG | - | chr4_3:29838002-29838021 | None:intergenic | 40.0% |
| GTTTGCACTAGTGATACTTG+AGG | - | chr4_3:29838114-29838133 | None:intergenic | 40.0% | |
| GTTCTTCAAACTTTCAGCCT+CGG | - | chr4_3:29838225-29838244 | None:intergenic | 40.0% | |
| !! | GTGTTCAAAAATGGTAGTGG+TGG | + | chr4_3:29838245-29838264 | Msa0637600:CDS | 40.0% |
| !!! | TAGGTGCCTTTTTCAAGTCT+TGG | - | chr4_3:29838295-29838314 | None:intergenic | 40.0% |
| !! | GACTTGAAAAAGGCACCTAA+TGG | + | chr4_3:29838296-29838315 | Msa0637600:CDS | 40.0% |
| ! | TCCTTTTGTTCAGCTTTTGC+AGG | + | chr4_3:29838421-29838440 | Msa0637600:CDS | 40.0% |
| TCCTGCAAAAGCTGAACAAA+AGG | - | chr4_3:29838425-29838444 | None:intergenic | 40.0% | |
| AGGATAGACTACCTTAGGAA+TGG | - | chr4_3:29838462-29838481 | None:intergenic | 40.0% | |
| GTTGTTGATATATGCAGCAG+AGG | - | chr4_3:29838482-29838501 | None:intergenic | 40.0% | |
| ! | CTCAGCAAATGCTTTTAGTG+TGG | - | chr4_3:29838732-29838751 | None:intergenic | 40.0% |
| ACTCAATTTGACATGCCAAG+CGG | + | chr4_3:29838758-29838777 | Msa0637600:CDS | 40.0% | |
| ! | GAAATGCTATTTGGCACATC+CGG | - | chr4_3:29838875-29838894 | None:intergenic | 40.0% |
| GATGTGCCAAATAGCATTTC+AGG | + | chr4_3:29838875-29838894 | Msa0637600:intron | 40.0% | |
| GGTCTTCCTGAAATGCTATT+TGG | - | chr4_3:29838884-29838903 | None:intergenic | 40.0% | |
| ATAGCATTTCAGGAAGACCA+AGG | + | chr4_3:29838885-29838904 | Msa0637600:intron | 40.0% | |
| TGGGCAATTAGGATGCATAT+AGG | - | chr4_3:29839120-29839139 | None:intergenic | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | + | chr4_3:29839323-29839342 | Msa0637600:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr4_3:29839331-29839350 | None:intergenic | 40.0% |
| GACGAATTACTGAAGCTTGA+AGG | + | chr4_3:29839757-29839776 | Msa0637600:CDS | 40.0% | |
| GGACAGTCTTCAAGTCTTAA+TGG | + | chr4_3:29839778-29839797 | Msa0637600:CDS | 40.0% | |
| CTTCTGTGGAAGATGATGAA+TGG | + | chr4_3:29839821-29839840 | Msa0637600:CDS | 40.0% | |
| GATGATGAATGGGAAACAGT+AGG | + | chr4_3:29839832-29839851 | Msa0637600:CDS | 40.0% | |
| ! | ATCTTGGTGGGTATATGACA+AGG | - | chr4_3:29840009-29840028 | None:intergenic | 40.0% |
| !!! | GCCATTTTTTATCGGAGCTT+TGG | + | chr4_3:29840144-29840163 | Msa0637600:intron | 40.0% |
| CCCAAAGCTCCGATAAAAAA+TGG | - | chr4_3:29840148-29840167 | None:intergenic | 40.0% | |
| !! | ATCGGAGCTTTGGGATAAAA+AGG | + | chr4_3:29840154-29840173 | Msa0637600:intron | 40.0% |
| !! | TCGGAGCTTTGGGATAAAAA+GGG | + | chr4_3:29840155-29840174 | Msa0637600:intron | 40.0% |
| GGCAGATCTATTTCCTGAAA+AGG | - | chr4_3:29840240-29840259 | None:intergenic | 40.0% | |
| CAAGCGATATGGTTGATTAG+TGG | - | chr4_3:29840261-29840280 | None:intergenic | 40.0% | |
| ! | CATGGGCTATCCTAAATAGT+TGG | + | chr4_3:29840507-29840526 | Msa0637600:intron | 40.0% |
| TGTGCCCAAAATTGAAGTGT+TGG | + | chr4_3:29840690-29840709 | Msa0637600:intron | 40.0% | |
| ! | GTGCCCAAAATTGAAGTGTT+GGG | + | chr4_3:29840691-29840710 | Msa0637600:intron | 40.0% |
| TCTTCTTACTCTGGGTTGTT+AGG | + | chr4_3:29840736-29840755 | Msa0637600:intron | 40.0% | |
| ! | GGGTTGTTAGGTGTCATATT+TGG | + | chr4_3:29840748-29840767 | Msa0637600:intron | 40.0% |
| ! | TAGGTGTCATATTTGGTAGG+TGG | + | chr4_3:29840755-29840774 | Msa0637600:intron | 40.0% |
| AAGGTATGAACTGGGTTCTA+GGG | - | chr4_3:29840871-29840890 | None:intergenic | 40.0% | |
| ! | AAAGGTATGAACTGGGTTCT+AGG | - | chr4_3:29840872-29840891 | None:intergenic | 40.0% |
| CCACTGTATCATGCAGATAA+AGG | - | chr4_3:29840890-29840909 | None:intergenic | 40.0% | |
| CCTTTATCTGCATGATACAG+TGG | + | chr4_3:29840887-29840906 | Msa0637600:intron | 40.0% | |
| TTATCTGCATGATACAGTGG+CGG | + | chr4_3:29840890-29840909 | Msa0637600:intron | 40.0% | |
| CAATGTACTTTGGTTGTGCT+GGG | + | chr4_3:29841151-29841170 | Msa0637600:intron | 40.0% | |
| !!! | CACCTAATGCGTTTTGGTTA+TGG | + | chr4_3:29841278-29841297 | Msa0637600:CDS | 40.0% |
| ! | AATTCAAGAGGAAAGTGCAC+GGG | - | chr4_3:29841332-29841351 | None:intergenic | 40.0% |
| ! | CAATTCAAGAGGAAAGTGCA+CGG | - | chr4_3:29841333-29841352 | None:intergenic | 40.0% |
| CAGTATATGGTGAAACAAGC+AGG | - | chr4_3:29841370-29841389 | None:intergenic | 40.0% | |
| GCTTGTTTCACCATATACTG+AGG | + | chr4_3:29841370-29841389 | Msa0637600:CDS | 40.0% | |
| ! | GCAACCTGCTTTATTCTCAA+TGG | + | chr4_3:29841501-29841520 | Msa0637600:intron | 40.0% |
| ATTAGATCTTCCAGGGTGAT+GGG | - | chr4_3:29841733-29841752 | None:intergenic | 40.0% | |
| AATTAGATCTTCCAGGGTGA+TGG | - | chr4_3:29841734-29841753 | None:intergenic | 40.0% | |
| TTTAACAGGTCAACAGTCCA+AGG | - | chr4_3:29841972-29841991 | None:intergenic | 40.0% | |
| TAAATAAACTCTGCTGCGAG+AGG | + | chr4_3:29842067-29842086 | Msa0637600:intron | 40.0% | |
| AAATAAACTCTGCTGCGAGA+GGG | + | chr4_3:29842068-29842087 | Msa0637600:intron | 40.0% | |
| CCTTTAACTCCTTCAACCAT+TGG | - | chr4_3:29842120-29842139 | None:intergenic | 40.0% | |
| CCAATGGTTGAAGGAGTTAA+AGG | + | chr4_3:29842117-29842136 | Msa0637600:intron | 40.0% | |
| TGGTTGAAGGAGTTAAAGGA+CGG | + | chr4_3:29842121-29842140 | Msa0637600:intron | 40.0% | |
| ACCAAAAAAAATCTGCTGGG+AGG | + | chr4_3:29842207-29842226 | Msa0637600:intron | 40.0% | |
| CCAAAAAAAATCTGCTGGGA+GGG | + | chr4_3:29842208-29842227 | Msa0637600:intron | 40.0% | |
| ! | GAGGGTTTTACTTCGCAAAT+GGG | + | chr4_3:29842226-29842245 | Msa0637600:intron | 40.0% |
| CAGTATCTGAAAGCTGCATT+GGG | - | chr4_3:29842278-29842297 | None:intergenic | 40.0% | |
| TCAGTATCTGAAAGCTGCAT+TGG | - | chr4_3:29842279-29842298 | None:intergenic | 40.0% | |
| AATGCAGCTTTCAGATACTG+AGG | + | chr4_3:29842278-29842297 | Msa0637600:intron | 40.0% | |
| !! | AAATAAGGTGCTGCATGATC+AGG | + | chr4_3:29842628-29842647 | Msa0637600:CDS | 40.0% |
| ! | TATCTACTCCCTTTTGCACT+TGG | + | chr4_3:29842703-29842722 | Msa0637600:three_prime_UTR | 40.0% |
| TCATGGTCTAGATAACAAGG+AGG | - | chr4_3:29842874-29842893 | None:intergenic | 40.0% | |
| ACATGTTCACGTCCTAAACT+AGG | - | chr4_3:29842910-29842929 | None:intergenic | 40.0% | |
| TCTTCGTCGATGCTTCTTCT+TGG | + | chr4_3:29836944-29836963 | Msa0637600:five_prime_UTR | 45.0% | |
| ATTCAAAAGCTCAAACGGGG+AGG | + | chr4_3:29836969-29836988 | Msa0637600:five_prime_UTR | 45.0% | |
| TTCAAAAGCTCAAACGGGGA+GGG | + | chr4_3:29836970-29836989 | Msa0637600:five_prime_UTR | 45.0% | |
| ATTACAGCGTCTCCTCTTTC+AGG | + | chr4_3:29837038-29837057 | Msa0637600:five_prime_UTR | 45.0% | |
| TTACAGCGTCTCCTCTTTCA+GGG | + | chr4_3:29837039-29837058 | Msa0637600:five_prime_UTR | 45.0% | |
| !! | GTTTTTGGAGACCCTGAAAG+AGG | - | chr4_3:29837053-29837072 | None:intergenic | 45.0% |
| TGGAAGAGGAAGATGCAACA+AGG | - | chr4_3:29837144-29837163 | None:intergenic | 45.0% | |
| ! | TAACATTTTCTCCTTCGGCC+GGG | - | chr4_3:29837506-29837525 | None:intergenic | 45.0% |
| !! | AGTCCGGTGTTGTCAAATAG+CGG | + | chr4_3:29837621-29837640 | Msa0637600:intron | 45.0% |
| GAACCGCTATTTGACAACAC+CGG | - | chr4_3:29837627-29837646 | None:intergenic | 45.0% | |
| ! | AAATAGCGGTTCTAGCGTAG+CGG | + | chr4_3:29837635-29837654 | Msa0637600:intron | 45.0% |
| GTGCTATAGCTGTAGCATAG+CGG | + | chr4_3:29837708-29837727 | Msa0637600:intron | 45.0% | |
| !!! | TTGTTTTTGGGTTTGGGAGC+AGG | + | chr4_3:29837803-29837822 | Msa0637600:intron | 45.0% |
| !! | TGGGAGCAGGTGTTACTATT+TGG | + | chr4_3:29837816-29837835 | Msa0637600:intron | 45.0% |
| TGCGAGAAATGAAAAGCCTG+TGG | + | chr4_3:29837887-29837906 | Msa0637600:CDS | 45.0% | |
| !! | GGAGCACTATTTGGTGCTTT+CGG | - | chr4_3:29837981-29838000 | None:intergenic | 45.0% |
| ! | TTTGAGTTTGGATGCTTCCG+AGG | + | chr4_3:29838205-29838224 | Msa0637600:CDS | 45.0% |
| TGCATAACAGCATGCCCATT+AGG | - | chr4_3:29838314-29838333 | None:intergenic | 45.0% | |
| GCATGCTGTTATGCATGCTA+AGG | + | chr4_3:29838319-29838338 | Msa0637600:CDS | 45.0% | |
| !! | CTCGAGGCCTTATTAACTCT+GGG | + | chr4_3:29838351-29838370 | Msa0637600:CDS | 45.0% |
| AAGAGCTCGTACCATTCCTA+AGG | + | chr4_3:29838448-29838467 | Msa0637600:CDS | 45.0% | |
| AGCAGAGGATAGACTACCTT+AGG | - | chr4_3:29838467-29838486 | None:intergenic | 45.0% | |
| CATTTCAGGAAGACCAAGGT+TGG | + | chr4_3:29838889-29838908 | Msa0637600:intron | 45.0% | |
| TTTATGCTACTCCCACGTAG+TGG | + | chr4_3:29838942-29838961 | Msa0637600:intron | 45.0% | |
| TTATGCTACTCCCACGTAGT+GGG | + | chr4_3:29838943-29838962 | Msa0637600:intron | 45.0% | |
| ! | CAAGTCTTATCCCACTACGT+GGG | - | chr4_3:29838956-29838975 | None:intergenic | 45.0% |
| ! | CTGTCTATCTGTCACTTCTG+TGG | + | chr4_3:29840045-29840064 | Msa0637600:intron | 45.0% |
| AAGGGGGTGAATTACAGCAA+GGG | - | chr4_3:29840120-29840139 | None:intergenic | 45.0% | |
| TCGAGATGGATCAAGCGATA+TGG | - | chr4_3:29840272-29840291 | None:intergenic | 45.0% | |
| CAATGGTGTGAACAGCATCA+GGG | - | chr4_3:29840301-29840320 | None:intergenic | 45.0% | |
| TCAATGGTGTGAACAGCATC+AGG | - | chr4_3:29840302-29840321 | None:intergenic | 45.0% | |
| TGATGCTGTTCACACCATTG+AGG | + | chr4_3:29840301-29840320 | Msa0637600:CDS | 45.0% | |
| TCTGCTCCAGAAACTCTTGA+AGG | + | chr4_3:29840341-29840360 | Msa0637600:CDS | 45.0% | |
| CGGTAACCTTCAAGAGTTTC+TGG | - | chr4_3:29840350-29840369 | None:intergenic | 45.0% | |
| TCTTGAAGGTTACCGAGCAT+CGG | + | chr4_3:29840355-29840374 | Msa0637600:CDS | 45.0% | |
| AGTGCAATGTGATGCATGCA+TGG | + | chr4_3:29840489-29840508 | Msa0637600:intron | 45.0% | |
| GTGCAATGTGATGCATGCAT+GGG | + | chr4_3:29840490-29840509 | Msa0637600:intron | 45.0% | |
| ! | AAGATGTGGTCTGAAGTCAC+TGG | + | chr4_3:29841078-29841097 | Msa0637600:intron | 45.0% |
| GCAATGTACTTTGGTTGTGC+TGG | + | chr4_3:29841150-29841169 | Msa0637600:intron | 45.0% | |
| !!! | CGTTTTGGTTATGGAAGCCA+GGG | + | chr4_3:29841287-29841306 | Msa0637600:CDS | 45.0% |
| CGTGCACTTTCCTCTTGAAT+TGG | + | chr4_3:29841331-29841350 | Msa0637600:CDS | 45.0% | |
| CGACCCAATACCAATTCAAG+AGG | - | chr4_3:29841344-29841363 | None:intergenic | 45.0% | |
| !! | TAAATGCTGGCTTCCCTTTC+TGG | + | chr4_3:29841465-29841484 | Msa0637600:intron | 45.0% |
| GTACTAGCAACCACCAGAAA+GGG | - | chr4_3:29841481-29841500 | None:intergenic | 45.0% | |
| TTAGATCTTCCAGGGTGATG+GGG | - | chr4_3:29841732-29841751 | None:intergenic | 45.0% | |
| AATAAACTCTGCTGCGAGAG+GGG | + | chr4_3:29842069-29842088 | Msa0637600:intron | 45.0% | |
| !! | GCTTAACTGGTTTGAGCCAA+TGG | + | chr4_3:29842101-29842120 | Msa0637600:intron | 45.0% |
| TGGTTTGAGCCAATGGTTGA+AGG | + | chr4_3:29842108-29842127 | Msa0637600:intron | 45.0% | |
| GGTTGAAGGAGTTAAAGGAC+GGG | + | chr4_3:29842122-29842141 | Msa0637600:intron | 45.0% | |
| GTTGAAGGAGTTAAAGGACG+GGG | + | chr4_3:29842123-29842142 | Msa0637600:intron | 45.0% | |
| TTGAAGGAGTTAAAGGACGG+GGG | + | chr4_3:29842124-29842143 | Msa0637600:intron | 45.0% | |
| !!! | CCCTCCCAGCAGATTTTTTT+TGG | - | chr4_3:29842211-29842230 | None:intergenic | 45.0% |
| ! | GGAGGGTTTTACTTCGCAAA+TGG | + | chr4_3:29842225-29842244 | Msa0637600:intron | 45.0% |
| ATGGAAGGGAGCCTTCAAAA+GGG | + | chr4_3:29842528-29842547 | Msa0637600:CDS | 45.0% | |
| ! | GCTGTGTAATGCCCTTTTGA+AGG | - | chr4_3:29842542-29842561 | None:intergenic | 45.0% |
| TAATCACTCGCATCTTCTCC+AGG | - | chr4_3:29842776-29842795 | None:intergenic | 45.0% | |
| !! | AAAGTTAAATAATTTAATAT+AGG | + | chr4_3:29840992-29841011 | Msa0637600:intron | 5.0% |
| GCTAAGGGAAAAGGAGTTGG+AGG | + | chr4_3:29837460-29837479 | Msa0637600:intron | 50.0% | |
| ! | TGCAGCTGATTCTTCTCCAC+AGG | - | chr4_3:29837906-29837925 | None:intergenic | 50.0% |
| GTGCTTTCGGTGAATTTGGC+AGG | - | chr4_3:29837968-29837987 | None:intergenic | 50.0% | |
| !! | TCACGGAGAGGAGCACTATT+TGG | - | chr4_3:29837990-29838009 | None:intergenic | 50.0% |
| AGTGATACTTGAGGGACCGA+TGG | - | chr4_3:29838105-29838124 | None:intergenic | 50.0% | |
| CCAGAGTTAATAAGGCCTCG+AGG | - | chr4_3:29838353-29838372 | None:intergenic | 50.0% | |
| !! | CCTCGAGGCCTTATTAACTC+TGG | + | chr4_3:29838350-29838369 | Msa0637600:CDS | 50.0% |
| ! | CCAAGTCTTATCCCACTACG+TGG | - | chr4_3:29838957-29838976 | None:intergenic | 50.0% |
| ! | CCACGTAGTGGGATAAGACT+TGG | + | chr4_3:29838954-29838973 | Msa0637600:intron | 50.0% |
| ! | GAAAAGTCTTGTCCTGGGCA+GGG | - | chr4_3:29839003-29839022 | None:intergenic | 50.0% |
| ! | TGAAAAGTCTTGTCCTGGGC+AGG | - | chr4_3:29839004-29839023 | None:intergenic | 50.0% |
| CGGAGGACAACTCCAAAGTT+TGG | + | chr4_3:29839921-29839940 | Msa0637600:CDS | 50.0% | |
| GAAGGGGGTGAATTACAGCA+AGG | - | chr4_3:29840121-29840140 | None:intergenic | 50.0% | |
| CATCAGGGTGAATGTCGAGA+TGG | - | chr4_3:29840286-29840305 | None:intergenic | 50.0% | |
| !! | GAGTTTCTGGAGCAGAGAAC+AGG | - | chr4_3:29840337-29840356 | None:intergenic | 50.0% |
| TATTTGGTAGGTGGCACGCA+TGG | + | chr4_3:29840764-29840783 | Msa0637600:intron | 50.0% | |
| AGGTAGGTGGCGTATGAACT+GGG | - | chr4_3:29840828-29840847 | None:intergenic | 50.0% | |
| !!! | GCGTTTTGGTTATGGAAGCC+AGG | + | chr4_3:29841286-29841305 | Msa0637600:CDS | 50.0% |
| !! | TAAGCAACTTGGTGCTTCCC+TGG | - | chr4_3:29841307-29841326 | None:intergenic | 50.0% |
| CGTACTAGCAACCACCAGAA+AGG | - | chr4_3:29841482-29841501 | None:intergenic | 50.0% | |
| ! | TAGATCTTCCAGGGTGATGG+GGG | - | chr4_3:29841731-29841750 | None:intergenic | 50.0% |
| ATAAACTCTGCTGCGAGAGG+GGG | + | chr4_3:29842070-29842089 | Msa0637600:intron | 50.0% | |
| GGGGGTTCAAATCTCAGTGA+AGG | + | chr4_3:29842142-29842161 | Msa0637600:intron | 50.0% | |
| CATGGAAGGGAGCCTTCAAA+AGG | + | chr4_3:29842527-29842546 | Msa0637600:CDS | 50.0% | |
| ATGCCCAGTACCCTAATGGT+CGG | + | chr4_3:29842564-29842583 | Msa0637600:CDS | 50.0% | |
| GAAAAGGAGTTGGAGGTCCG+AGG | + | chr4_3:29837467-29837486 | Msa0637600:intron | 55.0% | |
| CGGGTTTGAACTCACGACCT+CGG | - | chr4_3:29837487-29837506 | None:intergenic | 55.0% | |
| CGAGGTCGTGAGTTCAAACC+CGG | + | chr4_3:29837485-29837504 | Msa0637600:intron | 55.0% | |
| GCTAAGGATCTTCAGCCTCG+AGG | + | chr4_3:29838335-29838354 | Msa0637600:CDS | 55.0% | |
| CTTCCTTAGTGCAACCGTGC+AGG | + | chr4_3:29838382-29838401 | Msa0637600:CDS | 55.0% | |
| ACAAGCCAAGAGAGCCTGCA+CGG | - | chr4_3:29838399-29838418 | None:intergenic | 55.0% | |
| TATGCTACTCTTCCCTGCCC+AGG | + | chr4_3:29838988-29839007 | Msa0637600:intron | 55.0% | |
| GGCATCTTCTTGCCTGAGAG+TGG | - | chr4_3:29839701-29839720 | None:intergenic | 55.0% | |
| TCTCAGGCAAGAAGATGCCC+AGG | + | chr4_3:29839702-29839721 | Msa0637600:intron | 55.0% | |
| TGGAGCAGAGAACAGGTGCA+GGG | - | chr4_3:29840330-29840349 | None:intergenic | 55.0% | |
| CCTTTCCAGAGACCGATGCT+CGG | - | chr4_3:29840370-29840389 | None:intergenic | 55.0% | |
| GAGGTAGGTGGCGTATGAAC+TGG | - | chr4_3:29840829-29840848 | None:intergenic | 55.0% | |
| GTGCACGGGCTTAAGCAACT+TGG | - | chr4_3:29841318-29841337 | None:intergenic | 55.0% | |
| !! | ATGCTGGCTTCCCTTTCTGG+TGG | + | chr4_3:29841468-29841487 | Msa0637600:intron | 55.0% |
| !! | AGATCTTCCAGGGTGATGGG+GGG | - | chr4_3:29841730-29841749 | None:intergenic | 55.0% |
| CGTGACAACTGCTCTACCCT+TGG | - | chr4_3:29841849-29841868 | None:intergenic | 55.0% | |
| TAAACTCTGCTGCGAGAGGG+GGG | + | chr4_3:29842071-29842090 | Msa0637600:intron | 55.0% | |
| GCTGATGCCCAGTACCCTAA+TGG | + | chr4_3:29842560-29842579 | Msa0637600:CDS | 55.0% | |
| ! | CCACCGACCATTAGGGTACT+GGG | - | chr4_3:29842570-29842589 | None:intergenic | 55.0% |
| ATCGCAGCCACCGACCATTA+GGG | - | chr4_3:29842577-29842596 | None:intergenic | 55.0% | |
| AATCGCAGCCACCGACCATT+AGG | - | chr4_3:29842578-29842597 | None:intergenic | 55.0% | |
| CCAGTTGAGCTACCCAACCC+CGG | - | chr4_3:29837435-29837454 | None:intergenic | 60.0% | |
| GTGAGTTCAAACCCGGCCGA+AGG | + | chr4_3:29837492-29837511 | Msa0637600:intron | 60.0% | |
| GAGCCTGCACGGTTGCACTA+AGG | - | chr4_3:29838388-29838407 | None:intergenic | 60.0% | |
| TGCAACCGTGCAGGCTCTCT+TGG | + | chr4_3:29838391-29838410 | Msa0637600:CDS | 60.0% | |
| ! | GGTACCAACGTGCCACTCTC+AGG | + | chr4_3:29839686-29839705 | Msa0637600:intron | 60.0% |
| CTTGCCTGAGAGTGGCACGT+TGG | - | chr4_3:29839693-29839712 | None:intergenic | 60.0% | |
| ! | CAGGTGCAGGGCATCCTCAA+TGG | - | chr4_3:29840318-29840337 | None:intergenic | 60.0% |
| CTGGAGCAGAGAACAGGTGC+AGG | - | chr4_3:29840331-29840350 | None:intergenic | 60.0% | |
| !! | GGTTACCGAGCATCGGTCTC+TGG | + | chr4_3:29840362-29840381 | Msa0637600:CDS | 60.0% |
| !! | CCGAGCATCGGTCTCTGGAA+AGG | + | chr4_3:29840367-29840386 | Msa0637600:CDS | 60.0% |
| TAGTACTCCCCCCATCACCC+TGG | + | chr4_3:29841720-29841739 | Msa0637600:intron | 60.0% | |
| GGGGGGTTGGGTAGCTTAAC+TGG | + | chr4_3:29842088-29842107 | Msa0637600:intron | 60.0% | |
| CCCAGTACCCTAATGGTCGG+TGG | + | chr4_3:29842567-29842586 | Msa0637600:CDS | 60.0% | |
| GCCACCGACCATTAGGGTAC+TGG | - | chr4_3:29842571-29842590 | None:intergenic | 60.0% | |
| CCGGGGTTGGGTAGCTCAAC+TGG | + | chr4_3:29837432-29837451 | Msa0637600:intron | 65.0% | |
| TCTGCTGCGAGAGGGGGGTT+GGG | + | chr4_3:29842076-29842095 | Msa0637600:intron | 65.0% | |
| CTCTGCTGCGAGAGGGGGGT+TGG | + | chr4_3:29842075-29842094 | Msa0637600:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 29836821 | 29843225 | 29836821 | ID=Msa0637600;Name=Msa0637600 |
| chr4_3 | mRNA | 29836821 | 29843225 | 29836821 | ID=Msa0637600-mRNA-1;Parent=Msa0637600;Name=Msa0637600-mRNA-1;_AED=0.03;_eAED=0.03;_QI=356|0.83|0.85|1|0.83|0.85|7|546|511 |
| chr4_3 | exon | 29836821 | 29837191 | 29836821 | ID=Msa0637600-mRNA-1:exon:7220;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29837825 | 29838469 | 29837825 | ID=Msa0637600-mRNA-1:exon:7221;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29838719 | 29838843 | 29838719 | ID=Msa0637600-mRNA-1:exon:7222;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29839708 | 29839955 | 29839708 | ID=Msa0637600-mRNA-1:exon:7223;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29840246 | 29840388 | 29840246 | ID=Msa0637600-mRNA-1:exon:7224;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29841221 | 29841391 | 29841221 | ID=Msa0637600-mRNA-1:exon:7225;Parent=Msa0637600-mRNA-1 |
| chr4_3 | exon | 29842491 | 29843225 | 29842491 | ID=Msa0637600-mRNA-1:exon:7226;Parent=Msa0637600-mRNA-1 |
| chr4_3 | five_prime_UTR | 29836821 | 29837176 | 29836821 | ID=Msa0637600-mRNA-1:five_prime_utr;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29837177 | 29837191 | 29837177 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29837825 | 29838469 | 29837825 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29838719 | 29838843 | 29838719 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29839708 | 29839955 | 29839708 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29840246 | 29840388 | 29840246 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29841221 | 29841391 | 29841221 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | CDS | 29842491 | 29842679 | 29842491 | ID=Msa0637600-mRNA-1:cds;Parent=Msa0637600-mRNA-1 |
| chr4_3 | three_prime_UTR | 29842680 | 29843225 | 29842680 | ID=Msa0637600-mRNA-1:three_prime_utr;Parent=Msa0637600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
