AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236460 MtrunA17_Chr8g0346551 96.654 269 6 2 7 272 1 269 0.0 526
Msa1236460 MtrunA17_Chr3g0127201 45.973 298 121 12 7 272 1 290 1.94e-68 213
Msa1236460 MtrunA17_Chr1g0188851 45.423 284 101 16 1 263 10 260 9.21e-52 171
Msa1236460 MtrunA17_Chr2g0326001 75.000 72 16 1 15 84 23 94 7.32e-34 124
Msa1236460 MtrunA17_Chr3g0117601 52.000 125 45 4 16 136 45 158 9.66e-31 117
Msa1236460 MtrunA17_Chr8g0374251 54.808 104 41 2 27 130 65 162 1.37e-30 117
Msa1236460 MtrunA17_Chr4g0031411 72.059 68 19 0 17 84 62 129 2.83e-30 115
Msa1236460 MtrunA17_Chr8g0367161 66.250 80 24 2 21 98 21 99 9.46e-30 114
Msa1236460 MtrunA17_Chr4g0010151 43.796 137 70 2 17 146 69 205 1.11e-29 114
Msa1236460 MtrunA17_Chr4g0030051 69.014 71 20 1 14 82 23 93 1.72e-29 112
Msa1236460 MtrunA17_Chr3g0126201 76.562 64 13 1 23 84 42 105 2.19e-29 113
Msa1236460 MtrunA17_Chr4g0047001 73.529 68 14 1 32 99 57 120 3.20e-29 114
Msa1236460 MtrunA17_Chr8g0374111 48.214 112 48 2 17 122 10 117 5.01e-29 110
Msa1236460 MtrunA17_Chr1g0177251 87.037 54 7 0 31 84 13 66 5.03e-29 111
Msa1236460 MtrunA17_Chr2g0328021 63.636 77 28 0 27 103 59 135 6.39e-29 111
Msa1236460 MtrunA17_Chr2g0282441 77.966 59 12 1 23 81 19 76 4.75e-28 110
Msa1236460 MtrunA17_Chr5g0411951 78.182 55 12 0 26 80 39 93 6.54e-28 109
Msa1236460 MtrunA17_Chr8g0341671 72.131 61 17 0 27 87 17 77 1.35e-27 105
Msa1236460 MtrunA17_Chr7g0223311 83.019 53 9 0 32 84 79 131 4.06e-27 108
Msa1236460 MtrunA17_Chr7g0237921 79.245 53 11 0 32 84 78 130 5.82e-27 107
Msa1236460 MtrunA17_Chr2g0282051 58.108 74 30 1 12 85 28 100 8.19e-27 105
Msa1236460 MtrunA17_Chr4g0047761 74.138 58 14 1 28 85 70 126 3.81e-26 104
Msa1236460 MtrunA17_Chr3g0092111 69.492 59 18 0 25 83 131 189 5.47e-26 106
Msa1236460 MtrunA17_Chr4g0042481 64.062 64 23 0 25 88 117 180 2.09e-25 104
Msa1236460 MtrunA17_Chr4g0061761 77.358 53 12 0 28 80 38 90 3.49e-25 102
Msa1236460 MtrunA17_Chr2g0308011 81.633 49 9 0 30 78 37 85 4.75e-25 99.4
Msa1236460 MtrunA17_Chr7g0217581 58.974 78 25 1 25 95 227 304 5.18e-25 103
Msa1236460 MtrunA17_Chr7g0254161 61.905 63 24 0 25 87 96 158 5.71e-25 102
Msa1236460 MtrunA17_Chr6g0460721 60.317 63 25 0 25 87 84 146 7.01e-25 101
Msa1236460 MtrunA17_Chr2g0282511 79.592 49 10 0 30 78 45 93 1.43e-24 100
Msa1236460 MtrunA17_Chr2g0283811 63.636 66 22 1 18 83 37 100 1.54e-24 96.3
Msa1236460 MtrunA17_Chr8g0355261 61.290 62 24 0 25 86 113 174 2.39e-24 101
Msa1236460 MtrunA17_Chr6g0460731 46.875 96 49 1 5 100 73 166 2.54e-24 100
Msa1236460 MtrunA17_Chr6g0453321 66.102 59 20 0 25 83 131 189 3.88e-24 101
Msa1236460 MtrunA17_Chr5g0417571 62.712 59 22 0 25 83 133 191 2.29e-23 97.1
Msa1236460 MtrunA17_Chr5g0417601 66.667 54 18 0 30 83 140 193 2.92e-21 92.0
Msa1236460 MtrunA17_Chr5g0417561 56.250 64 28 0 20 83 109 172 9.67e-21 90.5
Msa1236460 MtrunA17_Chr5g0417551 56.250 64 28 0 20 83 117 180 1.04e-20 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236460 AT3G61850.5 52.158 278 87 19 22 272 54 312 6.02e-67 211
Msa1236460 AT3G61850.4 51.625 277 90 18 22 272 66 324 9.91e-67 211
Msa1236460 AT3G61850.2 49.813 267 82 16 22 272 54 284 1.63e-64 203
Msa1236460 AT3G61850.3 49.813 267 82 16 22 272 54 284 1.63e-64 203
Msa1236460 AT3G61850.1 49.813 267 82 16 22 272 66 296 2.00e-64 204
Msa1236460 AT2G46590.1 43.408 311 105 13 21 272 59 357 2.92e-56 184
Msa1236460 AT2G46590.2 43.408 311 105 13 21 272 71 369 4.09e-56 184
Msa1236460 AT4G24060.1 38.907 311 124 15 19 272 40 341 7.62e-44 152
Msa1236460 AT4G00940.1 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1236460 AT4G00940.3 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1236460 AT4G00940.2 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1236460 AT1G64620.1 37.143 315 126 11 16 267 33 338 1.19e-38 139
Msa1236460 AT5G60200.1 48.780 123 57 2 16 136 41 159 5.81e-33 121
Msa1236460 AT3G55370.1 73.529 68 18 0 17 84 63 130 1.37e-31 119
Msa1236460 AT3G55370.3 73.529 68 18 0 17 84 108 175 1.66e-31 120
Msa1236460 AT3G55370.2 73.529 68 18 0 17 84 63 130 1.91e-31 119
Msa1236460 AT2G28510.1 55.357 112 46 2 28 136 46 156 2.45e-31 118
Msa1236460 AT3G45610.1 60.494 81 30 1 22 102 32 110 8.82e-30 112
Msa1236460 AT2G37590.1 75.410 61 15 0 24 84 83 143 9.24e-30 114
Msa1236460 AT1G51700.1 64.103 78 25 2 27 101 30 107 1.61e-29 110
Msa1236460 AT5G65590.1 64.935 77 23 1 24 100 35 107 2.20e-29 113
Msa1236460 AT5G66940.1 74.138 58 15 0 27 84 29 86 1.96e-28 108
Msa1236460 AT3G52440.1 82.456 57 10 0 32 88 27 83 2.02e-28 109
Msa1236460 AT3G52440.2 82.456 57 10 0 32 88 46 102 2.35e-28 109
Msa1236460 AT3G50410.1 74.138 58 15 0 27 84 27 84 3.34e-28 108
Msa1236460 AT5G02460.1 67.647 68 22 0 17 84 82 149 3.51e-28 111
Msa1236460 AT5G60850.1 58.333 84 30 1 28 111 49 127 9.29e-28 108
Msa1236460 AT3G21270.1 53.125 96 24 1 30 104 29 124 1.07e-27 106
Msa1236460 AT2G28810.2 68.182 66 20 1 17 81 63 128 1.51e-27 108
Msa1236460 AT2G28810.1 68.182 66 20 1 17 81 80 145 1.93e-27 108
Msa1236460 AT1G07640.1 78.182 55 12 0 30 84 21 75 2.30e-27 107
Msa1236460 AT1G07640.2 78.182 55 12 0 30 84 77 131 2.40e-27 108
Msa1236460 AT4G38000.1 64.474 76 24 2 16 89 25 99 2.72e-27 106
Msa1236460 AT1G07640.3 78.182 55 12 0 30 84 85 139 2.73e-27 108
Msa1236460 AT1G28310.1 75.000 56 14 0 30 85 27 82 3.79e-27 107
Msa1236460 AT1G21340.1 71.212 66 16 1 22 84 27 92 4.42e-27 106
Msa1236460 AT1G28310.2 75.000 56 14 0 30 85 51 106 6.19e-27 107
Msa1236460 AT1G69570.1 70.312 64 19 0 25 88 127 190 1.90e-26 107
Msa1236460 AT5G62940.1 85.714 49 7 0 32 80 75 123 4.85e-26 105
Msa1236460 AT4G21050.1 68.852 61 19 0 25 85 19 79 8.92e-26 101
Msa1236460 AT1G29160.1 61.765 68 26 0 16 83 48 115 1.04e-25 100
Msa1236460 AT2G34140.1 58.108 74 31 0 10 83 38 111 1.17e-25 100
Msa1236460 AT1G47655.1 76.923 52 12 0 28 79 27 78 3.20e-25 99.8
Msa1236460 AT5G39660.3 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1236460 AT5G39660.1 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1236460 AT5G39660.2 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1236460 AT3G47500.1 66.102 59 20 0 25 83 105 163 3.88e-24 101
Msa1236460 AT5G62430.1 64.407 59 21 0 25 83 49 107 5.04e-24 99.0
Msa1236460 AT1G26790.1 66.102 59 20 0 25 83 106 164 7.58e-24 99.4
Msa1236460 AT4G21040.1 75.000 52 13 0 32 83 27 78 1.07e-23 96.3
Msa1236460 AT4G21080.1 71.154 52 15 0 32 83 27 78 1.44e-22 94.0
Msa1236460 AT4G21030.1 58.000 50 21 0 32 81 23 72 2.61e-13 67.4

Find 80 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCCTTGGACATGAATT+AGG 0.219906 8_2:-15436896 None:intergenic
TAGAAGAATAGGTGAATATT+AGG 0.224079 8_2:+15438077 Msa1236460:three_prime_UTR
AGACAAATGATACCTATTAA+AGG 0.279065 8_2:-15437769 None:intergenic
TTCTTCTTTAAGAAGTATAT+TGG 0.301097 8_2:+15438139 Msa1236460:three_prime_UTR
AAGGAAATTCAACTGGATAT+TGG 0.307009 8_2:+15437629 Msa1236460:CDS
TCAAATGCTATTTATCCATC+TGG 0.339522 8_2:+15437415 Msa1236460:CDS
TTCTTCTCTAATCCTTGCCT+TGG 0.373577 8_2:-15436908 None:intergenic
GGATAAATAGCATTTGAGTT+TGG 0.376465 8_2:-15437409 None:intergenic
GAATTATTGTTATTAGCATA+AGG 0.380378 8_2:-15437379 None:intergenic
CATGTCTTGCAAAAGTATCT+TGG 0.386535 8_2:-15437019 None:intergenic
TTTAACTACTAACATAATAT+AGG 0.388806 8_2:-15438178 None:intergenic
AGTTGTTCAAAACTAACAAT+AGG 0.388982 8_2:+15437794 Msa1236460:three_prime_UTR
GCAAGACATGTAGAAGGTAT+TGG 0.389030 8_2:+15437032 Msa1236460:CDS
AAAGAAGAATTCATGAATAC+AGG 0.394951 8_2:-15438125 None:intergenic
TTGTATACAATTAATACCTT+TGG 0.396746 8_2:+15438010 Msa1236460:three_prime_UTR
CTTGTAGGGTAGGTGGATTT+AGG 0.414726 8_2:-15437165 None:intergenic
ATGAAAGATGTGAAACTTGT+AGG 0.415991 8_2:-15437180 None:intergenic
AATTATTGTTATTAGCATAA+GGG 0.416837 8_2:-15437378 None:intergenic
GATCAATGCACATGCACTAC+TGG 0.424715 8_2:+15437816 Msa1236460:three_prime_UTR
GATCAACAAGGAAATTCAAC+TGG 0.430255 8_2:+15437622 Msa1236460:CDS
GGACAATTTATTTGCTCTTG+TGG 0.430301 8_2:-15436938 None:intergenic
TTTCTTGAACCACCTCCAAC+AGG 0.434621 8_2:-15437082 None:intergenic
CAAGAAGGTGGTGGTGGTGG+TGG 0.441828 8_2:+15437523 Msa1236460:CDS
GAAAAGCTAGGTTAAGATCT+TGG 0.443847 8_2:-15437228 None:intergenic
ATGTAGAGGGATAGAAGAAT+AGG 0.444778 8_2:+15438066 Msa1236460:three_prime_UTR
AGGGTAGGTGGATTTAGGTC+AGG 0.459379 8_2:-15437160 None:intergenic
CTTCAGCTCTTGACCTACTT+AGG 0.461666 8_2:+15437329 Msa1236460:CDS
TATTATTAACATCTCCAAAT+GGG 0.464550 8_2:-15437558 None:intergenic
TTATTATTAACATCTCCAAA+TGG 0.464816 8_2:-15437559 None:intergenic
CAAGAGGTTAAACCTAGTCT+TGG 0.471464 8_2:+15437448 Msa1236460:CDS
AGAAGAATAGGTGAATATTA+GGG 0.481225 8_2:+15438078 Msa1236460:three_prime_UTR
CTAAGAAATGTTCCTGTTGG+AGG 0.487652 8_2:+15437070 Msa1236460:CDS
GTTATGCATCTCAACATATG+AGG 0.495564 8_2:-15437290 None:intergenic
GTTCAAGAAGGTGGTGGTGG+TGG 0.497320 8_2:+15437520 Msa1236460:CDS
GAAAACTATCATCATAATCA+TGG 0.499028 8_2:+15437259 Msa1236460:CDS
TGGATATTGGAATGGAATGA+TGG 0.500493 8_2:+15437642 Msa1236460:CDS
TCTCTAAGAAATGTTCCTGT+TGG 0.507663 8_2:+15437067 Msa1236460:CDS
TGAAAGATGTGAAACTTGTA+GGG 0.508742 8_2:-15437179 None:intergenic
TTCTACAAGTGGTGTTGAAG+TGG 0.514078 8_2:+15437588 Msa1236460:CDS
AATCAAGAGAAAGAAGTTGA+AGG 0.514653 8_2:+15437684 Msa1236460:three_prime_UTR
AGAAATGTTCCTGTTGGAGG+TGG 0.521904 8_2:+15437073 Msa1236460:CDS
TGATGAACTATTATTAGGTG+TGG 0.533433 8_2:-15437131 None:intergenic
TGAATACAGGTTGCATGCCA+TGG 0.536484 8_2:-15438112 None:intergenic
TGTAGAAGGTATTGGACTGA+AGG 0.537478 8_2:+15437040 Msa1236460:CDS
AATTCAACTGGATATTGGAA+TGG 0.543811 8_2:+15437634 Msa1236460:CDS
TGTGAAACTTGTAGGGTAGG+TGG 0.547961 8_2:-15437172 None:intergenic
TTAGGTGTGGCTAATGATGA+AGG 0.550310 8_2:-15437118 None:intergenic
AATAAACAGCTTTCTACAAG+TGG 0.552575 8_2:+15437577 Msa1236460:CDS
GAATGATGGGTGAAGGATCA+TGG 0.555879 8_2:+15437656 Msa1236460:CDS
TAGGTATATATACTCATGGA+AGG 0.557450 8_2:+15436866 Msa1236460:intron
TTTCCATAGATGGAAAAGCT+AGG 0.562893 8_2:-15437240 None:intergenic
GATATAGGTATATATACTCA+TGG 0.574218 8_2:+15436862 Msa1236460:intron
ACTAGGTTTAACCTCTTGCA+TGG 0.575460 8_2:-15437443 None:intergenic
ACGCCATGCTTGACCTAAGT+AGG 0.576352 8_2:-15437342 None:intergenic
TCAATTGAAAATCCAAGACT+AGG 0.576773 8_2:-15437460 None:intergenic
CAAGTTCAAGAAGGTGGTGG+TGG 0.585887 8_2:+15437517 Msa1236460:CDS
GAGAAAGAAGTTGAAGGACA+AGG 0.587138 8_2:+15437690 Msa1236460:three_prime_UTR
TCTTGCATGGTGAATCCAGA+TGG 0.596007 8_2:-15437430 None:intergenic
AGATGTGAAACTTGTAGGGT+AGG 0.596355 8_2:-15437175 None:intergenic
TGCATCTCAACATATGAGGA+TGG 0.597529 8_2:-15437286 None:intergenic
TCTCAAAACCCTAAAATACA+AGG 0.599552 8_2:+15437202 Msa1236460:CDS
AGGTCAAGCATGGCGTCTAG+AGG 0.600125 8_2:+15437349 Msa1236460:CDS
TGGAATGGAATGATGGGTGA+AGG 0.602503 8_2:+15437649 Msa1236460:CDS
GGATATTGGAATGGAATGAT+GGG 0.607936 8_2:+15437643 Msa1236460:CDS
AAGAGCAAATAAATTGTCCA+AGG 0.610950 8_2:+15436942 Msa1236460:CDS
GATCATGTTCAAGTTCAAGA+AGG 0.611680 8_2:+15437508 Msa1236460:CDS
TAGCTCCTAATTCATGTCCA+AGG 0.613211 8_2:+15436891 Msa1236460:CDS
CCTAATTCATGTCCAAGGCA+AGG 0.615681 8_2:+15436896 Msa1236460:CDS
AGAAGGTATTGGACTGAAGG+AGG 0.618740 8_2:+15437043 Msa1236460:CDS
ATCTGGATTCACCATGCAAG+AGG 0.619968 8_2:+15437432 Msa1236460:CDS
GTTCAAGTTCAAGAAGGTGG+TGG 0.620240 8_2:+15437514 Msa1236460:CDS
AAGGATTAGAGAAGAAAGCA+AGG 0.621824 8_2:+15436915 Msa1236460:CDS
GTATTAATTTGAGTAATGTG+AGG 0.622347 8_2:+15438032 Msa1236460:three_prime_UTR
ATTACTCAAATTAATACCAA+AGG 0.625716 8_2:-15438026 None:intergenic
CATGTTCAAGTTCAAGAAGG+TGG 0.629706 8_2:+15437511 Msa1236460:CDS
GTGTTTGTTGAATTGCACCT+TGG 0.631036 8_2:-15436959 None:intergenic
TGACCTACTTAGGTCAAGCA+TGG 0.635115 8_2:+15437339 Msa1236460:CDS
AGGTATATATACTCATGGAA+GGG 0.656170 8_2:+15436867 Msa1236460:intron
CAAAACCCTAAAATACAAGG+AGG 0.720797 8_2:+15437205 Msa1236460:CDS
GAACACAATAAAGATCAACA+AGG 0.746748 8_2:+15437610 Msa1236460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAGAAAAATATATTTA+AGG + chr8_2:15436448-15436467 Msa1236460:intron 10.0%
!!! TGTTATTTTTTAATATTTTG+AGG + chr8_2:15436651-15436670 Msa1236460:intron 10.0%
!! AAAATAAAATGTAAATGATT+AGG - chr8_2:15436685-15436704 None:intergenic 10.0%
!! CATTAAGAAAAATATATTTA+AGG + chr8_2:15436448-15436467 Msa1236460:intron 10.0%
!!! TGTTATTTTTTAATATTTTG+AGG + chr8_2:15436651-15436670 Msa1236460:intron 10.0%
!! AAAATAAAATGTAAATGATT+AGG - chr8_2:15436685-15436704 None:intergenic 10.0%
!! ACTTTATGAATGATATATAA+AGG - chr8_2:15436085-15436104 None:intergenic 15.0%
!!! ATTTTTCTTAATGAACATAT+AGG - chr8_2:15436441-15436460 None:intergenic 15.0%
!! ATATGAACATATATATAGAT+GGG - chr8_2:15436478-15436497 None:intergenic 15.0%
!! AATATGAACATATATATAGA+TGG - chr8_2:15436479-15436498 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG - chr8_2:15437139-15437158 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG - chr8_2:15437381-15437400 None:intergenic 15.0%
!!! ATTTTTTTTTCTCCTTTAAT+AGG + chr8_2:15437757-15437776 Msa1236460:three_prime_UTR 15.0%
!! TTTAACTACTAACATAATAT+AGG - chr8_2:15438181-15438200 None:intergenic 15.0%
!! ACTTTATGAATGATATATAA+AGG - chr8_2:15436085-15436104 None:intergenic 15.0%
!!! ATTTTTCTTAATGAACATAT+AGG - chr8_2:15436441-15436460 None:intergenic 15.0%
!! ATATGAACATATATATAGAT+GGG - chr8_2:15436478-15436497 None:intergenic 15.0%
!! AATATGAACATATATATAGA+TGG - chr8_2:15436479-15436498 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG - chr8_2:15437139-15437158 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG - chr8_2:15437381-15437400 None:intergenic 15.0%
!!! ATTTTTTTTTCTCCTTTAAT+AGG + chr8_2:15437757-15437776 Msa1236460:three_prime_UTR 15.0%
!! TTTAACTACTAACATAATAT+AGG - chr8_2:15438181-15438200 None:intergenic 15.0%
!! TTCTTATAGCTATTTATTCT+GGG + chr8_2:15436311-15436330 Msa1236460:intron 20.0%
!!! GATCAAAAATTTCCTTTTAT+TGG - chr8_2:15436525-15436544 None:intergenic 20.0%
!! AAATTATCATATGAGCAAAA+AGG - chr8_2:15436594-15436613 None:intergenic 20.0%
!! ATTGAATTATATGGTGAAAA+GGG - chr8_2:15436709-15436728 None:intergenic 20.0%
!! AATTGAATTATATGGTGAAA+AGG - chr8_2:15436710-15436729 None:intergenic 20.0%
!! ACTCAAACAATTGAATTATA+TGG - chr8_2:15436718-15436737 None:intergenic 20.0%
!!! ATGTTTGCATAACATATTTT+TGG - chr8_2:15436779-15436798 None:intergenic 20.0%
!!! GAATTATTGTTATTAGCATA+AGG - chr8_2:15437382-15437401 None:intergenic 20.0%
!!! TTTTCAATTGATGGAATTAA+TGG + chr8_2:15437472-15437491 Msa1236460:CDS 20.0%
!! TATTATTAACATCTCCAAAT+GGG - chr8_2:15437561-15437580 None:intergenic 20.0%
!! TTATTATTAACATCTCCAAA+TGG - chr8_2:15437562-15437581 None:intergenic 20.0%
!! TTGTATACAATTAATACCTT+TGG + chr8_2:15438010-15438029 Msa1236460:three_prime_UTR 20.0%
!! ATTACTCAAATTAATACCAA+AGG - chr8_2:15438029-15438048 None:intergenic 20.0%
!!! TTCTTCTTTAAGAAGTATAT+TGG + chr8_2:15438139-15438158 Msa1236460:three_prime_UTR 20.0%
!! TTCTTATAGCTATTTATTCT+GGG + chr8_2:15436311-15436330 Msa1236460:intron 20.0%
!!! GATCAAAAATTTCCTTTTAT+TGG - chr8_2:15436525-15436544 None:intergenic 20.0%
!! AAATTATCATATGAGCAAAA+AGG - chr8_2:15436594-15436613 None:intergenic 20.0%
!! ATTGAATTATATGGTGAAAA+GGG - chr8_2:15436709-15436728 None:intergenic 20.0%
!! AATTGAATTATATGGTGAAA+AGG - chr8_2:15436710-15436729 None:intergenic 20.0%
!! ACTCAAACAATTGAATTATA+TGG - chr8_2:15436718-15436737 None:intergenic 20.0%
!!! ATGTTTGCATAACATATTTT+TGG - chr8_2:15436779-15436798 None:intergenic 20.0%
!!! GAATTATTGTTATTAGCATA+AGG - chr8_2:15437382-15437401 None:intergenic 20.0%
!!! TTTTCAATTGATGGAATTAA+TGG + chr8_2:15437472-15437491 Msa1236460:CDS 20.0%
!! TATTATTAACATCTCCAAAT+GGG - chr8_2:15437561-15437580 None:intergenic 20.0%
!! TTATTATTAACATCTCCAAA+TGG - chr8_2:15437562-15437581 None:intergenic 20.0%
!! TTGTATACAATTAATACCTT+TGG + chr8_2:15438010-15438029 Msa1236460:three_prime_UTR 20.0%
!! ATTACTCAAATTAATACCAA+AGG - chr8_2:15438029-15438048 None:intergenic 20.0%
!!! TTCTTCTTTAAGAAGTATAT+TGG + chr8_2:15438139-15438158 Msa1236460:three_prime_UTR 20.0%
!!! ATGTTTTTGTTTTCGTTTGT+GGG - chr8_2:15436132-15436151 None:intergenic 25.0%
!!! AATGTTTTTGTTTTCGTTTG+TGG - chr8_2:15436133-15436152 None:intergenic 25.0%
! TTTAATTCATGACCAAAGAA+AGG + chr8_2:15436245-15436264 Msa1236460:intron 25.0%
! CTTCTTATAGCTATTTATTC+TGG + chr8_2:15436310-15436329 Msa1236460:intron 25.0%
!!! CTCTTTTTTCTACCAATAAA+AGG + chr8_2:15436510-15436529 Msa1236460:intron 25.0%
!! AAAGTTGAGTTTTTGATACT+AGG - chr8_2:15436552-15436571 None:intergenic 25.0%
!!! GCATAACATATTTTTGGATT+TGG - chr8_2:15436773-15436792 None:intergenic 25.0%
! GATATAGGTATATATACTCA+TGG + chr8_2:15436862-15436881 Msa1236460:intron 25.0%
! GAAAACTATCATCATAATCA+TGG + chr8_2:15437259-15437278 Msa1236460:CDS 25.0%
! AGACAAATGATACCTATTAA+AGG - chr8_2:15437772-15437791 None:intergenic 25.0%
! AGTTGTTCAAAACTAACAAT+AGG + chr8_2:15437794-15437813 Msa1236460:three_prime_UTR 25.0%
!! GTATTAATTTGAGTAATGTG+AGG + chr8_2:15438032-15438051 Msa1236460:three_prime_UTR 25.0%
! TAGAAGAATAGGTGAATATT+AGG + chr8_2:15438077-15438096 Msa1236460:three_prime_UTR 25.0%
! AGAAGAATAGGTGAATATTA+GGG + chr8_2:15438078-15438097 Msa1236460:three_prime_UTR 25.0%
! AAAGAAGAATTCATGAATAC+AGG - chr8_2:15438128-15438147 None:intergenic 25.0%
!!! ATGTTTTTGTTTTCGTTTGT+GGG - chr8_2:15436132-15436151 None:intergenic 25.0%
!!! AATGTTTTTGTTTTCGTTTG+TGG - chr8_2:15436133-15436152 None:intergenic 25.0%
! TTTAATTCATGACCAAAGAA+AGG + chr8_2:15436245-15436264 Msa1236460:intron 25.0%
! CTTCTTATAGCTATTTATTC+TGG + chr8_2:15436310-15436329 Msa1236460:intron 25.0%
!!! CTCTTTTTTCTACCAATAAA+AGG + chr8_2:15436510-15436529 Msa1236460:intron 25.0%
!! AAAGTTGAGTTTTTGATACT+AGG - chr8_2:15436552-15436571 None:intergenic 25.0%
!!! GCATAACATATTTTTGGATT+TGG - chr8_2:15436773-15436792 None:intergenic 25.0%
! GATATAGGTATATATACTCA+TGG + chr8_2:15436862-15436881 Msa1236460:intron 25.0%
! GAAAACTATCATCATAATCA+TGG + chr8_2:15437259-15437278 Msa1236460:CDS 25.0%
! AGACAAATGATACCTATTAA+AGG - chr8_2:15437772-15437791 None:intergenic 25.0%
! AGTTGTTCAAAACTAACAAT+AGG + chr8_2:15437794-15437813 Msa1236460:three_prime_UTR 25.0%
!! GTATTAATTTGAGTAATGTG+AGG + chr8_2:15438032-15438051 Msa1236460:three_prime_UTR 25.0%
! TAGAAGAATAGGTGAATATT+AGG + chr8_2:15438077-15438096 Msa1236460:three_prime_UTR 25.0%
! AGAAGAATAGGTGAATATTA+GGG + chr8_2:15438078-15438097 Msa1236460:three_prime_UTR 25.0%
! AAAGAAGAATTCATGAATAC+AGG - chr8_2:15438128-15438147 None:intergenic 25.0%
AAACATTCTTTCTTGCACTA+AGG + chr8_2:15436146-15436165 Msa1236460:intron 30.0%
!!! TTCATTTTCTAGCTATACCT+AGG + chr8_2:15436413-15436432 Msa1236460:intron 30.0%
TAATGAACATATAGGAACCT+AGG - chr8_2:15436433-15436452 None:intergenic 30.0%
TGAACATATATATAGATGGG+TGG - chr8_2:15436475-15436494 None:intergenic 30.0%
AAAGGTAAAGAGAAAGGAAA+AGG - chr8_2:15436576-15436595 None:intergenic 30.0%
TAGGTATATATACTCATGGA+AGG + chr8_2:15436866-15436885 Msa1236460:intron 30.0%
AGGTATATATACTCATGGAA+GGG + chr8_2:15436867-15436886 Msa1236460:intron 30.0%
AAGAGCAAATAAATTGTCCA+AGG + chr8_2:15436942-15436961 Msa1236460:CDS 30.0%
TGATGAACTATTATTAGGTG+TGG - chr8_2:15437134-15437153 None:intergenic 30.0%
TGAAAGATGTGAAACTTGTA+GGG - chr8_2:15437182-15437201 None:intergenic 30.0%
ATGAAAGATGTGAAACTTGT+AGG - chr8_2:15437183-15437202 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG + chr8_2:15437202-15437221 Msa1236460:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG - chr8_2:15437253-15437272 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG - chr8_2:15437412-15437431 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG + chr8_2:15437415-15437434 Msa1236460:CDS 30.0%
TCAATTGAAAATCCAAGACT+AGG - chr8_2:15437463-15437482 None:intergenic 30.0%
! AGTCTTGGATTTTCAATTGA+TGG + chr8_2:15437463-15437482 Msa1236460:CDS 30.0%
AATAAACAGCTTTCTACAAG+TGG + chr8_2:15437577-15437596 Msa1236460:CDS 30.0%
GAACACAATAAAGATCAACA+AGG + chr8_2:15437610-15437629 Msa1236460:CDS 30.0%
AAGGAAATTCAACTGGATAT+TGG + chr8_2:15437629-15437648 Msa1236460:CDS 30.0%
AATTCAACTGGATATTGGAA+TGG + chr8_2:15437634-15437653 Msa1236460:CDS 30.0%
AATCAAGAGAAAGAAGTTGA+AGG + chr8_2:15437684-15437703 Msa1236460:three_prime_UTR 30.0%
! AGGATTGTTTTCATATGTAG+AGG + chr8_2:15438052-15438071 Msa1236460:three_prime_UTR 30.0%
! GGATTGTTTTCATATGTAGA+GGG + chr8_2:15438053-15438072 Msa1236460:three_prime_UTR 30.0%
AAACATTCTTTCTTGCACTA+AGG + chr8_2:15436146-15436165 Msa1236460:intron 30.0%
!!! TTCATTTTCTAGCTATACCT+AGG + chr8_2:15436413-15436432 Msa1236460:intron 30.0%
TAATGAACATATAGGAACCT+AGG - chr8_2:15436433-15436452 None:intergenic 30.0%
TGAACATATATATAGATGGG+TGG - chr8_2:15436475-15436494 None:intergenic 30.0%
AAAGGTAAAGAGAAAGGAAA+AGG - chr8_2:15436576-15436595 None:intergenic 30.0%
TAGGTATATATACTCATGGA+AGG + chr8_2:15436866-15436885 Msa1236460:intron 30.0%
AGGTATATATACTCATGGAA+GGG + chr8_2:15436867-15436886 Msa1236460:intron 30.0%
AAGAGCAAATAAATTGTCCA+AGG + chr8_2:15436942-15436961 Msa1236460:CDS 30.0%
TGATGAACTATTATTAGGTG+TGG - chr8_2:15437134-15437153 None:intergenic 30.0%
TGAAAGATGTGAAACTTGTA+GGG - chr8_2:15437182-15437201 None:intergenic 30.0%
ATGAAAGATGTGAAACTTGT+AGG - chr8_2:15437183-15437202 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG + chr8_2:15437202-15437221 Msa1236460:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG - chr8_2:15437253-15437272 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG - chr8_2:15437412-15437431 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG + chr8_2:15437415-15437434 Msa1236460:CDS 30.0%
TCAATTGAAAATCCAAGACT+AGG - chr8_2:15437463-15437482 None:intergenic 30.0%
! AGTCTTGGATTTTCAATTGA+TGG + chr8_2:15437463-15437482 Msa1236460:CDS 30.0%
AATAAACAGCTTTCTACAAG+TGG + chr8_2:15437577-15437596 Msa1236460:CDS 30.0%
GAACACAATAAAGATCAACA+AGG + chr8_2:15437610-15437629 Msa1236460:CDS 30.0%
AAGGAAATTCAACTGGATAT+TGG + chr8_2:15437629-15437648 Msa1236460:CDS 30.0%
AATTCAACTGGATATTGGAA+TGG + chr8_2:15437634-15437653 Msa1236460:CDS 30.0%
AATCAAGAGAAAGAAGTTGA+AGG + chr8_2:15437684-15437703 Msa1236460:three_prime_UTR 30.0%
! AGGATTGTTTTCATATGTAG+AGG + chr8_2:15438052-15438071 Msa1236460:three_prime_UTR 30.0%
! GGATTGTTTTCATATGTAGA+GGG + chr8_2:15438053-15438072 Msa1236460:three_prime_UTR 30.0%
AAAAGCAAAGAGAGAGAAAG+AGG - chr8_2:15436208-15436227 None:intergenic 35.0%
AATTCATGACCAAAGAAAGG+TGG + chr8_2:15436248-15436267 Msa1236460:intron 35.0%
AATCCATATCCACCTTTCTT+TGG - chr8_2:15436260-15436279 None:intergenic 35.0%
AGCTATTTATTCTGGGTTTG+AGG + chr8_2:15436318-15436337 Msa1236460:intron 35.0%
GCTATTTATTCTGGGTTTGA+GGG + chr8_2:15436319-15436338 Msa1236460:intron 35.0%
GAGCAAAAAGGTAAAGAGAA+AGG - chr8_2:15436582-15436601 None:intergenic 35.0%
GGATTCATGTCACATGATAT+AGG + chr8_2:15436847-15436866 Msa1236460:intron 35.0%
AAGGATTAGAGAAGAAAGCA+AGG + chr8_2:15436915-15436934 Msa1236460:CDS 35.0%
GGACAATTTATTTGCTCTTG+TGG - chr8_2:15436941-15436960 None:intergenic 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG - chr8_2:15437022-15437041 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG + chr8_2:15437026-15437045 Msa1236460:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG + chr8_2:15437067-15437086 Msa1236460:CDS 35.0%
CAAAACCCTAAAATACAAGG+AGG + chr8_2:15437205-15437224 Msa1236460:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG - chr8_2:15437231-15437250 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG + chr8_2:15437237-15437256 Msa1236460:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG - chr8_2:15437243-15437262 None:intergenic 35.0%
GTTATGCATCTCAACATATG+AGG - chr8_2:15437293-15437312 None:intergenic 35.0%
! GATCATGTTCAAGTTCAAGA+AGG + chr8_2:15437508-15437527 Msa1236460:CDS 35.0%
GATCAACAAGGAAATTCAAC+TGG + chr8_2:15437622-15437641 Msa1236460:CDS 35.0%
TGGATATTGGAATGGAATGA+TGG + chr8_2:15437642-15437661 Msa1236460:CDS 35.0%
GGATATTGGAATGGAATGAT+GGG + chr8_2:15437643-15437662 Msa1236460:CDS 35.0%
ACATGCACTACTGGAAAAAT+TGG + chr8_2:15437825-15437844 Msa1236460:three_prime_UTR 35.0%
ATGTAGAGGGATAGAAGAAT+AGG + chr8_2:15438066-15438085 Msa1236460:three_prime_UTR 35.0%
!!! TTAGGGATTGTTTTTGTCCA+TGG + chr8_2:15438095-15438114 Msa1236460:three_prime_UTR 35.0%
AAAAGCAAAGAGAGAGAAAG+AGG - chr8_2:15436208-15436227 None:intergenic 35.0%
AATTCATGACCAAAGAAAGG+TGG + chr8_2:15436248-15436267 Msa1236460:intron 35.0%
AATCCATATCCACCTTTCTT+TGG - chr8_2:15436260-15436279 None:intergenic 35.0%
AGCTATTTATTCTGGGTTTG+AGG + chr8_2:15436318-15436337 Msa1236460:intron 35.0%
GCTATTTATTCTGGGTTTGA+GGG + chr8_2:15436319-15436338 Msa1236460:intron 35.0%
GAGCAAAAAGGTAAAGAGAA+AGG - chr8_2:15436582-15436601 None:intergenic 35.0%
GGATTCATGTCACATGATAT+AGG + chr8_2:15436847-15436866 Msa1236460:intron 35.0%
AAGGATTAGAGAAGAAAGCA+AGG + chr8_2:15436915-15436934 Msa1236460:CDS 35.0%
GGACAATTTATTTGCTCTTG+TGG - chr8_2:15436941-15436960 None:intergenic 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG - chr8_2:15437022-15437041 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG + chr8_2:15437026-15437045 Msa1236460:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG + chr8_2:15437067-15437086 Msa1236460:CDS 35.0%
CAAAACCCTAAAATACAAGG+AGG + chr8_2:15437205-15437224 Msa1236460:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG - chr8_2:15437231-15437250 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG + chr8_2:15437237-15437256 Msa1236460:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG - chr8_2:15437243-15437262 None:intergenic 35.0%
GTTATGCATCTCAACATATG+AGG - chr8_2:15437293-15437312 None:intergenic 35.0%
! GATCATGTTCAAGTTCAAGA+AGG + chr8_2:15437508-15437527 Msa1236460:CDS 35.0%
GATCAACAAGGAAATTCAAC+TGG + chr8_2:15437622-15437641 Msa1236460:CDS 35.0%
TGGATATTGGAATGGAATGA+TGG + chr8_2:15437642-15437661 Msa1236460:CDS 35.0%
GGATATTGGAATGGAATGAT+GGG + chr8_2:15437643-15437662 Msa1236460:CDS 35.0%
ACATGCACTACTGGAAAAAT+TGG + chr8_2:15437825-15437844 Msa1236460:three_prime_UTR 35.0%
ATGTAGAGGGATAGAAGAAT+AGG + chr8_2:15438066-15438085 Msa1236460:three_prime_UTR 35.0%
!!! TTAGGGATTGTTTTTGTCCA+TGG + chr8_2:15438095-15438114 Msa1236460:three_prime_UTR 35.0%
! TGCAGTCTTGTAGACATACA+AGG + chr8_2:15436177-15436196 Msa1236460:intron 40.0%
TGACCAAAGAAAGGTGGATA+TGG + chr8_2:15436254-15436273 Msa1236460:intron 40.0%
! GTTGATAGATGTGTCAGCTT+TGG - chr8_2:15436350-15436369 None:intergenic 40.0%
TAGCTCCTAATTCATGTCCA+AGG + chr8_2:15436891-15436910 Msa1236460:CDS 40.0%
TTCTTCTCTAATCCTTGCCT+TGG - chr8_2:15436911-15436930 None:intergenic 40.0%
! GTGTTTGTTGAATTGCACCT+TGG - chr8_2:15436962-15436981 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG + chr8_2:15437032-15437051 Msa1236460:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr8_2:15437040-15437059 Msa1236460:CDS 40.0%
CTAAGAAATGTTCCTGTTGG+AGG + chr8_2:15437070-15437089 Msa1236460:CDS 40.0%
TTAGGTGTGGCTAATGATGA+AGG - chr8_2:15437121-15437140 None:intergenic 40.0%
AGATGTGAAACTTGTAGGGT+AGG - chr8_2:15437178-15437197 None:intergenic 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG - chr8_2:15437213-15437232 None:intergenic 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG - chr8_2:15437214-15437233 None:intergenic 40.0%
TGCATCTCAACATATGAGGA+TGG - chr8_2:15437289-15437308 None:intergenic 40.0%
ACTAGGTTTAACCTCTTGCA+TGG - chr8_2:15437446-15437465 None:intergenic 40.0%
CAAGAGGTTAAACCTAGTCT+TGG + chr8_2:15437448-15437467 Msa1236460:CDS 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG + chr8_2:15437511-15437530 Msa1236460:CDS 40.0%
! GGAAGACTTTTGTTCCCATT+TGG + chr8_2:15437544-15437563 Msa1236460:CDS 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG + chr8_2:15437588-15437607 Msa1236460:CDS 40.0%
GAGAAAGAAGTTGAAGGACA+AGG + chr8_2:15437690-15437709 Msa1236460:three_prime_UTR 40.0%
!!! CTGTTTTGACTACACAAGCA+TGG - chr8_2:15436025-15436044 None:intergenic 40.0%
! TGCAGTCTTGTAGACATACA+AGG + chr8_2:15436177-15436196 Msa1236460:intron 40.0%
TGACCAAAGAAAGGTGGATA+TGG + chr8_2:15436254-15436273 Msa1236460:intron 40.0%
! GTTGATAGATGTGTCAGCTT+TGG - chr8_2:15436350-15436369 None:intergenic 40.0%
TAGCTCCTAATTCATGTCCA+AGG + chr8_2:15436891-15436910 Msa1236460:CDS 40.0%
TTCTTCTCTAATCCTTGCCT+TGG - chr8_2:15436911-15436930 None:intergenic 40.0%
! GTGTTTGTTGAATTGCACCT+TGG - chr8_2:15436962-15436981 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG + chr8_2:15437032-15437051 Msa1236460:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr8_2:15437040-15437059 Msa1236460:CDS 40.0%
CTAAGAAATGTTCCTGTTGG+AGG + chr8_2:15437070-15437089 Msa1236460:CDS 40.0%
TTAGGTGTGGCTAATGATGA+AGG - chr8_2:15437121-15437140 None:intergenic 40.0%
AGATGTGAAACTTGTAGGGT+AGG - chr8_2:15437178-15437197 None:intergenic 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG - chr8_2:15437213-15437232 None:intergenic 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG - chr8_2:15437214-15437233 None:intergenic 40.0%
TGCATCTCAACATATGAGGA+TGG - chr8_2:15437289-15437308 None:intergenic 40.0%
ACTAGGTTTAACCTCTTGCA+TGG - chr8_2:15437446-15437465 None:intergenic 40.0%
CAAGAGGTTAAACCTAGTCT+TGG + chr8_2:15437448-15437467 Msa1236460:CDS 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG + chr8_2:15437511-15437530 Msa1236460:CDS 40.0%
! GGAAGACTTTTGTTCCCATT+TGG + chr8_2:15437544-15437563 Msa1236460:CDS 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG + chr8_2:15437588-15437607 Msa1236460:CDS 40.0%
GAGAAAGAAGTTGAAGGACA+AGG + chr8_2:15437690-15437709 Msa1236460:three_prime_UTR 40.0%
TTTCTTGCACTAAGGAGAGC+AGG + chr8_2:15436154-15436173 Msa1236460:intron 45.0%
CCTTGCCTTGGACATGAATT+AGG - chr8_2:15436899-15436918 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG + chr8_2:15436896-15436915 Msa1236460:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG + chr8_2:15437043-15437062 Msa1236460:CDS 45.0%
AGAAATGTTCCTGTTGGAGG+TGG + chr8_2:15437073-15437092 Msa1236460:CDS 45.0%
TTTCTTGAACCACCTCCAAC+AGG - chr8_2:15437085-15437104 None:intergenic 45.0%
! CTTGTAGGGTAGGTGGATTT+AGG - chr8_2:15437168-15437187 None:intergenic 45.0%
TGTGAAACTTGTAGGGTAGG+TGG - chr8_2:15437175-15437194 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG + chr8_2:15437329-15437348 Msa1236460:CDS 45.0%
TGACCTACTTAGGTCAAGCA+TGG + chr8_2:15437339-15437358 Msa1236460:CDS 45.0%
TCTTGCATGGTGAATCCAGA+TGG - chr8_2:15437433-15437452 None:intergenic 45.0%
ATCTGGATTCACCATGCAAG+AGG + chr8_2:15437432-15437451 Msa1236460:CDS 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG + chr8_2:15437514-15437533 Msa1236460:CDS 45.0%
!! TGGAATGGAATGATGGGTGA+AGG + chr8_2:15437649-15437668 Msa1236460:CDS 45.0%
!! GAATGATGGGTGAAGGATCA+TGG + chr8_2:15437656-15437675 Msa1236460:CDS 45.0%
GATCAATGCACATGCACTAC+TGG + chr8_2:15437816-15437835 Msa1236460:three_prime_UTR 45.0%
TGAATACAGGTTGCATGCCA+TGG - chr8_2:15438115-15438134 None:intergenic 45.0%
TTTCTTGCACTAAGGAGAGC+AGG + chr8_2:15436154-15436173 Msa1236460:intron 45.0%
CCTTGCCTTGGACATGAATT+AGG - chr8_2:15436899-15436918 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG + chr8_2:15436896-15436915 Msa1236460:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG + chr8_2:15437043-15437062 Msa1236460:CDS 45.0%
AGAAATGTTCCTGTTGGAGG+TGG + chr8_2:15437073-15437092 Msa1236460:CDS 45.0%
TTTCTTGAACCACCTCCAAC+AGG - chr8_2:15437085-15437104 None:intergenic 45.0%
! CTTGTAGGGTAGGTGGATTT+AGG - chr8_2:15437168-15437187 None:intergenic 45.0%
TGTGAAACTTGTAGGGTAGG+TGG - chr8_2:15437175-15437194 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG + chr8_2:15437329-15437348 Msa1236460:CDS 45.0%
TGACCTACTTAGGTCAAGCA+TGG + chr8_2:15437339-15437358 Msa1236460:CDS 45.0%
TCTTGCATGGTGAATCCAGA+TGG - chr8_2:15437433-15437452 None:intergenic 45.0%
ATCTGGATTCACCATGCAAG+AGG + chr8_2:15437432-15437451 Msa1236460:CDS 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG + chr8_2:15437514-15437533 Msa1236460:CDS 45.0%
!! TGGAATGGAATGATGGGTGA+AGG + chr8_2:15437649-15437668 Msa1236460:CDS 45.0%
!! GAATGATGGGTGAAGGATCA+TGG + chr8_2:15437656-15437675 Msa1236460:CDS 45.0%
GATCAATGCACATGCACTAC+TGG + chr8_2:15437816-15437835 Msa1236460:three_prime_UTR 45.0%
TGAATACAGGTTGCATGCCA+TGG - chr8_2:15438115-15438134 None:intergenic 45.0%
!!! TTTTATATATTTATATTCTA+TGG + chr8_2:15436826-15436845 Msa1236460:intron 5.0%
!!! TACTAAAAAAAATAAATTTT+AGG - chr8_2:15437971-15437990 None:intergenic 5.0%
!!! TTTTATATATTTATATTCTA+TGG + chr8_2:15436826-15436845 Msa1236460:intron 5.0%
!!! TACTAAAAAAAATAAATTTT+AGG - chr8_2:15437971-15437990 None:intergenic 5.0%
! AGGGTAGGTGGATTTAGGTC+AGG - chr8_2:15437163-15437182 None:intergenic 50.0%
ACGCCATGCTTGACCTAAGT+AGG - chr8_2:15437345-15437364 None:intergenic 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG + chr8_2:15437517-15437536 Msa1236460:CDS 50.0%
! AGGGTAGGTGGATTTAGGTC+AGG - chr8_2:15437163-15437182 None:intergenic 50.0%
ACGCCATGCTTGACCTAAGT+AGG - chr8_2:15437345-15437364 None:intergenic 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG + chr8_2:15437517-15437536 Msa1236460:CDS 50.0%
AGGTCAAGCATGGCGTCTAG+AGG + chr8_2:15437349-15437368 Msa1236460:CDS 55.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG + chr8_2:15437520-15437539 Msa1236460:CDS 55.0%
AGGTCAAGCATGGCGTCTAG+AGG + chr8_2:15437349-15437368 Msa1236460:CDS 55.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG + chr8_2:15437520-15437539 Msa1236460:CDS 55.0%
!! CAAGAAGGTGGTGGTGGTGG+TGG + chr8_2:15437523-15437542 Msa1236460:CDS 60.0%
!! CAAGAAGGTGGTGGTGGTGG+TGG + chr8_2:15437523-15437542 Msa1236460:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 15436024 15438219 15436024 ID=Msa1236460;Name=Msa1236460
chr8_2 mRNA 15436024 15438219 15436024 ID=Msa1236460-mRNA-1;Parent=Msa1236460;Name=Msa1236460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.5|1|0|0|2|538|272
chr8_2 exon 15436024 15436029 15436024 ID=Msa1236460-mRNA-1:exon:5834;Parent=Msa1236460-mRNA-1
chr8_2 exon 15436869 15438219 15436869 ID=Msa1236460-mRNA-1:exon:5835;Parent=Msa1236460-mRNA-1
chr8_2 CDS 15436024 15436029 15436024 ID=Msa1236460-mRNA-1:cds;Parent=Msa1236460-mRNA-1
chr8_2 CDS 15436869 15437681 15436869 ID=Msa1236460-mRNA-1:cds;Parent=Msa1236460-mRNA-1
chr8_2 three_prime_UTR 15437682 15438219 15437682 ID=Msa1236460-mRNA-1:three_prime_utr;Parent=Msa1236460-mRNA-1
Gene Sequence

>Msa1236460

ATGCTTGTATATATACTCATGGAAGGGTTAGCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACAAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCTACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCATCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCGTCTAGAGGCATAAACCCTTATGCTAATAACAATAATTCTTTGATGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAGGTTAAACCTAGTCTTGGATTTTCAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTTCAAGAAGGTGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA
Protein sequence

>Msa1236460

MLVYILMEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNSLMPNSNAIYPSGFTMQEVKPSLGFSIDGINGNRSYDHVQVQEGGGGGGRLLFPFGDVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW*