Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0694620 | XP_003608057.2 | 95.573 | 1039 | 33 | 1 | 1 | 1026 | 1 | 1039 | 0.0 | 2040 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0694620 | G7JNK6 | 95.573 | 1039 | 33 | 1 | 1 | 1026 | 1 | 1039 | 0.0 | 2040 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015090 | Msa0694620 | 0.807064 | 6.067007e-50 | -8.615850e-47 |
Msa0017320 | Msa0694620 | 0.804854 | 1.768491e-49 | -8.615850e-47 |
Msa0031180 | Msa0694620 | 0.802035 | 6.791388e-49 | -8.615850e-47 |
Msa0049750 | Msa0694620 | 0.805030 | 1.625276e-49 | -8.615850e-47 |
Msa0051450 | Msa0694620 | 0.803027 | 4.240626e-49 | -8.615850e-47 |
Msa0086420 | Msa0694620 | 0.801090 | 1.060770e-48 | -8.615850e-47 |
Msa0111080 | Msa0694620 | 0.829555 | 4.821861e-55 | -8.615850e-47 |
Msa0118540 | Msa0694620 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
Msa0604290 | Msa0694620 | 0.810107 | 1.358842e-50 | -8.615850e-47 |
Msa0623990 | Msa0694620 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
Msa0624060 | Msa0694620 | 0.812877 | 3.397618e-51 | -8.615850e-47 |
Msa0638890 | Msa0694620 | 0.806035 | 1.000235e-49 | -8.615850e-47 |
Msa0645530 | Msa0694620 | 0.814876 | 1.232150e-51 | -8.615850e-47 |
Msa0652060 | Msa0694620 | 0.946523 | 3.920622e-105 | -8.615850e-47 |
Msa0657120 | Msa0694620 | 0.812882 | 3.389396e-51 | -8.615850e-47 |
Msa0676130 | Msa0694620 | 0.808282 | 3.344162e-50 | -8.615850e-47 |
Msa0676180 | Msa0694620 | 0.803602 | 3.224158e-49 | -8.615850e-47 |
Msa0685090 | Msa0694620 | 0.812546 | 4.014820e-51 | -8.615850e-47 |
Msa0694620 | Msa0701100 | 0.804878 | 1.748705e-49 | -8.615850e-47 |
Msa0694620 | Msa0756380 | 0.808416 | 3.130036e-50 | -8.615850e-47 |
Msa0694620 | Msa0763890 | 0.814544 | 1.459864e-51 | -8.615850e-47 |
Msa0694620 | Msa0763920 | 0.819398 | 1.186258e-52 | -8.615850e-47 |
Msa0694620 | Msa0856960 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
Msa0694620 | Msa0985180 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
Msa0694620 | Msa1011090 | 0.800444 | 1.437099e-48 | -8.615850e-47 |
Msa0694620 | Msa1070520 | 0.803797 | 2.936701e-49 | -8.615850e-47 |
Msa0694620 | Msa1072900 | 0.801177 | 1.018235e-48 | -8.615850e-47 |
Msa0694620 | Msa1079860 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
Msa0694620 | Msa1137830 | 0.801693 | 7.983207e-49 | -8.615850e-47 |
Msa0694620 | Msa1175200 | 0.803729 | 3.034030e-49 | -8.615850e-47 |
Msa0694620 | Msa1180500 | 0.816898 | 4.362093e-52 | -8.615850e-47 |
Msa0694620 | Msa1221330 | 0.812352 | 4.428025e-51 | -8.615850e-47 |
Msa0694620 | Msa1231840 | 0.807177 | 5.740848e-50 | -8.615850e-47 |
Msa0694620 | Msa1274560 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
Msa0694620 | Msa1295930 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
Msa0694620 | Msa1297530 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
Msa0694620 | Msa1312520 | 0.818786 | 1.634723e-52 | -8.615850e-47 |
Msa0694620 | Msa1378410 | 0.813019 | 3.164170e-51 | -8.615850e-47 |
Msa0694620 | Msa1382020 | 0.804345 | 2.258969e-49 | -8.615850e-47 |
Msa0694620 | Msa1400930 | 0.844630 | 6.713632e-59 | -8.615850e-47 |
Msa0694620 | Msa1401460 | 0.808680 | 2.750113e-50 | -8.615850e-47 |
Msa0694620 | Msa1411980 | 0.803246 | 3.819576e-49 | -8.615850e-47 |
Msa0694620 | Msa1418850 | 0.800778 | 1.228654e-48 | -8.615850e-47 |
Msa0694620 | Msa1419840 | 0.813292 | 2.756056e-51 | -8.615850e-47 |
Msa0694620 | Msa1419990 | 0.815490 | 9.003539e-52 | -8.615850e-47 |
Msa0694620 | Msa1438840 | 0.807578 | 4.721214e-50 | -8.615850e-47 |
Msa0694620 | Msa1458090 | 0.801023 | 1.094630e-48 | -8.615850e-47 |
Msa0152560 | Msa0694620 | 0.815087 | 1.106118e-51 | -8.615850e-47 |
Msa0154920 | Msa0694620 | 0.832228 | 1.065677e-55 | -8.615850e-47 |
Msa0233370 | Msa0694620 | 0.816978 | 4.184049e-52 | -8.615850e-47 |
Msa0382310 | Msa0694620 | 0.801545 | 8.561214e-49 | -8.615850e-47 |
Msa0382370 | Msa0694620 | 0.828307 | 9.668458e-55 | -8.615850e-47 |
Msa0388730 | Msa0694620 | 0.842491 | 2.503391e-58 | -8.615850e-47 |
Msa0392270 | Msa0694620 | 0.833158 | 6.260713e-56 | -8.615850e-47 |
Msa0395980 | Msa0694620 | 0.816576 | 5.148917e-52 | -8.615850e-47 |
Msa0431210 | Msa0694620 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
Msa0432160 | Msa0694620 | 0.814783 | 1.292178e-51 | -8.615850e-47 |
Msa0438040 | Msa0694620 | 0.800164 | 1.638329e-48 | -8.615850e-47 |
Msa0476680 | Msa0694620 | 0.821279 | 4.392803e-53 | -8.615850e-47 |
Msa0482180 | Msa0694620 | 0.811364 | 7.266334e-51 | -8.615850e-47 |
Msa0271790 | Msa0694620 | 0.801457 | 8.924916e-49 | -8.615850e-47 |
Msa0311720 | Msa0694620 | 0.802534 | 5.361442e-49 | -8.615850e-47 |
Msa0362890 | Msa0694620 | 0.806700 | 7.243173e-50 | -8.615850e-47 |
Msa0487720 | Msa0694620 | 0.825158 | 5.458575e-54 | -8.615850e-47 |
Msa0491000 | Msa0694620 | 0.819050 | 1.423418e-52 | -8.615850e-47 |
Msa0520270 | Msa0694620 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
Msa0521010 | Msa0694620 | 0.824249 | 8.940800e-54 | -8.615850e-47 |
Msa0527740 | Msa0694620 | 0.803131 | 4.036394e-49 | -8.615850e-47 |
Msa0542290 | Msa0694620 | 0.810297 | 1.236246e-50 | -8.615850e-47 |
Msa0542560 | Msa0694620 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
Msa0581400 | Msa0694620 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0694620 | MtrunA17_Chr4g0045511 | 95.573 | 1039 | 33 | 1 | 1 | 1026 | 1 | 1039 | 0.0 | 2040 |
Msa0694620 | MtrunA17_Chr1g0162401 | 58.835 | 996 | 305 | 12 | 6 | 957 | 6 | 940 | 0.0 | 1085 |
Msa0694620 | MtrunA17_Chr4g0004641 | 39.419 | 482 | 215 | 12 | 561 | 1018 | 679 | 1107 | 1.81e-82 | 290 |
Msa0694620 | MtrunA17_Chr4g0004641 | 33.105 | 438 | 248 | 7 | 1 | 405 | 3 | 428 | 2.47e-65 | 240 |
Msa0694620 | MtrunA17_Chr4g0056351 | 78.333 | 120 | 13 | 1 | 550 | 656 | 1 | 120 | 3.21e-56 | 191 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0694620 | AT2G15900.1 | 51.478 | 1049 | 414 | 17 | 4 | 1019 | 2 | 988 | 0.0 | 992 |
Msa0694620 | AT1G15240.2 | 31.661 | 1096 | 576 | 28 | 3 | 1017 | 4 | 1007 | 8.23e-156 | 488 |
Msa0694620 | AT1G15240.3 | 30.467 | 1093 | 579 | 29 | 3 | 1006 | 4 | 1004 | 2.62e-142 | 452 |
Msa0694620 | AT1G15240.4 | 31.375 | 698 | 391 | 17 | 3 | 631 | 4 | 682 | 3.15e-88 | 298 |
Msa0694620 | AT1G15240.5 | 31.375 | 698 | 391 | 17 | 3 | 631 | 4 | 682 | 3.15e-88 | 298 |
Msa0694620 | AT1G15240.1 | 31.375 | 698 | 391 | 17 | 3 | 631 | 4 | 682 | 3.15e-88 | 298 |
Find 259 sgRNAs with CRISPR-Local
Find 879 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTGCCACCATTTGTTATT+TGG | 0.123366 | 4_4:-63956686 | None:intergenic |
CTCTCCCTGGTCACTCATTT+TGG | 0.156603 | 4_4:-63950123 | None:intergenic |
TGAGAGGCGCGAAGGATTTC+GGG | 0.165173 | 4_4:+63950706 | Msa0694620:CDS |
CATTCTTACTCGCGATAATT+TGG | 0.179445 | 4_4:+63953646 | Msa0694620:CDS |
CCTATGTTGTACATGAAATT+TGG | 0.196162 | 4_4:+63958055 | Msa0694620:three_prime_UTR |
ATACAAAATCCCCATGAAAA+TGG | 0.220400 | 4_4:-63958253 | None:intergenic |
TTGAGAGGCGCGAAGGATTT+CGG | 0.227157 | 4_4:+63950705 | Msa0694620:CDS |
GGCAAATGCAATGTGTAATT+TGG | 0.236142 | 4_4:-63951568 | None:intergenic |
CATTGCATTTGCCTCCTAAA+AGG | 0.265777 | 4_4:+63951578 | Msa0694620:CDS |
ATTCCATTTGTTGAACTCTA+AGG | 0.270304 | 4_4:+63947098 | Msa0694620:CDS |
ACACACCTTGGTGCGGTAAA+AGG | 0.270720 | 4_4:+63946197 | Msa0694620:five_prime_UTR |
ACTGCCACCATTTGTTATTT+GGG | 0.274884 | 4_4:-63956685 | None:intergenic |
CCTTCGCGCCTCTCAAATTC+CGG | 0.277396 | 4_4:-63950698 | None:intergenic |
TTTCTGAAGAACTACTCTTT+TGG | 0.284193 | 4_4:+63952146 | Msa0694620:intron |
TGACAGATGATTTAGGAAAT+TGG | 0.285953 | 4_4:+63958124 | Msa0694620:three_prime_UTR |
ATGGAGCTACCTTCTTGATT+AGG | 0.286690 | 4_4:-63950656 | None:intergenic |
TTCTTTATTCGTTTAGTCAT+TGG | 0.299598 | 4_4:+63958319 | Msa0694620:three_prime_UTR |
GCAACTTGCCTATGCAATTC+TGG | 0.300577 | 4_4:+63957918 | Msa0694620:CDS |
GATGCAGCCTGTTATGAATT+TGG | 0.304321 | 4_4:+63947370 | Msa0694620:CDS |
CGTTTAGTCATTGGGATTAG+AGG | 0.318416 | 4_4:+63958328 | Msa0694620:three_prime_UTR |
AAGCCTTCTCAAACAATAAC+TGG | 0.323170 | 4_4:+63956714 | Msa0694620:CDS |
GTTTACTCACTAACGTTTCC+TGG | 0.326174 | 4_4:-63950391 | None:intergenic |
ATCTCAGTTCCTTGGTATAA+AGG | 0.329897 | 4_4:-63950092 | None:intergenic |
TCAAACGATAATTTCTTGTC+TGG | 0.332288 | 4_4:-63950527 | None:intergenic |
ATTCAATTCAATTCAATTCC+AGG | 0.333662 | 4_4:+63946118 | Msa0694620:five_prime_UTR |
TGGAATATTCTTTGTATTGT+GGG | 0.340274 | 4_4:-63946057 | None:intergenic |
GACATCAAGAAACTGCTCTT+TGG | 0.346783 | 4_4:+63956813 | Msa0694620:CDS |
TACAAAATCCCCATGAAAAT+GGG | 0.351143 | 4_4:-63958252 | None:intergenic |
AGTTCAAGCTCCGCACTCTT+TGG | 0.351842 | 4_4:+63946303 | Msa0694620:CDS |
TCTTTATTCGTTTAGTCATT+GGG | 0.355850 | 4_4:+63958320 | Msa0694620:three_prime_UTR |
GACCTAAGTTGAATTCGATT+TGG | 0.356046 | 4_4:-63945980 | None:intergenic |
TCTCAAACAATAACTGGATC+TGG | 0.357752 | 4_4:+63956720 | Msa0694620:CDS |
TGGAGCTACCTTCTTGATTA+GGG | 0.358391 | 4_4:-63950655 | None:intergenic |
CATACCCGGCACCGGAGCTT+TGG | 0.360237 | 4_4:-63950776 | None:intergenic |
TTGCTGAACAACATGAAGTA+TGG | 0.367730 | 4_4:+63951982 | Msa0694620:CDS |
GTTCTTCTGACATGATAGTT+AGG | 0.369716 | 4_4:+63950735 | Msa0694620:CDS |
ACAGCCCAAGCCTGCTGATT+GGG | 0.370529 | 4_4:+63950184 | Msa0694620:CDS |
TGATCAGGAAACTCCCTATC+TGG | 0.371544 | 4_4:-63946791 | None:intergenic |
AATGCAGGAGACAGGTGTTT+TGG | 0.376563 | 4_4:+63955813 | Msa0694620:intron |
GGAGCTATGACAGATGATTT+AGG | 0.382376 | 4_4:+63958117 | Msa0694620:three_prime_UTR |
TGTGCCCAATCAGCAGGCTT+GGG | 0.385165 | 4_4:-63950188 | None:intergenic |
CCACATGTTCTCAAGATTCT+CGG | 0.390463 | 4_4:-63950255 | None:intergenic |
TGAGGCAGATTCACTGGCTT+CGG | 0.395414 | 4_4:+63955891 | Msa0694620:CDS |
ATGGAATATTCTTTGTATTG+TGG | 0.397528 | 4_4:-63946058 | None:intergenic |
AGAAGAAATCAAGCGGCAAT+AGG | 0.399169 | 4_4:+63947024 | Msa0694620:CDS |
GAGTGCGGAGCTTGAACTCT+TGG | 0.399382 | 4_4:-63946298 | None:intergenic |
GTGGTTGCACTTTATAAAAC+AGG | 0.399662 | 4_4:+63946019 | Msa0694620:five_prime_UTR |
AGGGATTTAGTTGATTTAGT+AGG | 0.400244 | 4_4:+63946982 | Msa0694620:intron |
GGCTCTTGAGGCAGATTCAC+TGG | 0.400717 | 4_4:+63955885 | Msa0694620:CDS |
TATTGTGGGTTATGAGTTGT+TGG | 0.401421 | 4_4:-63946043 | None:intergenic |
CACAGCCCAAGCCTGCTGAT+TGG | 0.405397 | 4_4:+63950183 | Msa0694620:CDS |
GGGCTTGCCAAATTCATAAC+AGG | 0.408154 | 4_4:-63947377 | None:intergenic |
CAAATTATCGCGAGTAAGAA+TGG | 0.411932 | 4_4:-63953645 | None:intergenic |
GCCTTGGAATGCAGATGAAT+TGG | 0.413059 | 4_4:+63953373 | Msa0694620:CDS |
AACATCACAAAACACGAATC+TGG | 0.416215 | 4_4:+63956750 | Msa0694620:CDS |
GACAAGAAATTATCGTTTGA+GGG | 0.418417 | 4_4:+63950530 | Msa0694620:CDS |
GAGAACAAAATTGTCAAAAG+TGG | 0.419503 | 4_4:+63950305 | Msa0694620:CDS |
ACATACATATCTGTCACATT+TGG | 0.425305 | 4_4:+63946604 | Msa0694620:CDS |
TTCTTCATCACATGTGGTAG+TGG | 0.428720 | 4_4:+63958028 | Msa0694620:three_prime_UTR |
CCGTGATTCGCTCAATATCT+CGG | 0.429698 | 4_4:+63947327 | Msa0694620:CDS |
GGTATAAAATTTCATTAAAG+AGG | 0.436199 | 4_4:+63950603 | Msa0694620:CDS |
GCCATTGCATCCTCCACAAC+AGG | 0.436964 | 4_4:-63946707 | None:intergenic |
ACCTCAGGTGGCACTCCAAC+AGG | 0.437065 | 4_4:-63953674 | None:intergenic |
TAAATAATGTCGAATTTCGT+TGG | 0.437575 | 4_4:+63946561 | Msa0694620:CDS |
CTGATACTGAGGACAGTGAT+AGG | 0.438597 | 4_4:+63953441 | Msa0694620:CDS |
AACATTTGTGCCCAATCAGC+AGG | 0.439180 | 4_4:-63950194 | None:intergenic |
CTACATCATTGTACTTGCCT+TGG | 0.443628 | 4_4:+63953357 | Msa0694620:CDS |
ACAACTTTAGTCAGCTTGAT+CGG | 0.445570 | 4_4:+63957712 | Msa0694620:CDS |
ATCAAGCTGACTAAAGTTGT+TGG | 0.447061 | 4_4:-63957709 | None:intergenic |
TCAAGCTCCGCACTCTTTGG+TGG | 0.447896 | 4_4:+63946306 | Msa0694620:CDS |
CTTCTCTATCAAAATTATCA+TGG | 0.448603 | 4_4:-63953478 | None:intergenic |
CTTGAGAACATGTGGGCAAA+AGG | 0.449336 | 4_4:+63950263 | Msa0694620:CDS |
ATTATAGCGTGTATCTGATC+AGG | 0.453520 | 4_4:-63946806 | None:intergenic |
CTTCGCGCCTCTCAAATTCC+GGG | 0.455719 | 4_4:-63950697 | None:intergenic |
GTGAAATGCTTCTAGTGAAT+AGG | 0.456705 | 4_4:+63958292 | Msa0694620:three_prime_UTR |
GTAAGAATGGAATTTGTAGT+TGG | 0.456922 | 4_4:-63953632 | None:intergenic |
GGCAATTAGCTCCAAAGCTC+CGG | 0.457099 | 4_4:+63950765 | Msa0694620:CDS |
CAAACGATAATTTCTTGTCT+GGG | 0.458726 | 4_4:-63950526 | None:intergenic |
TCTATCAATAGCCAAGTTGC+TGG | 0.459990 | 4_4:-63953567 | None:intergenic |
ACTGTATAAAACTTAGATAT+AGG | 0.460685 | 4_4:+63958171 | Msa0694620:three_prime_UTR |
TTGTGCCCAATCAGCAGGCT+TGG | 0.461797 | 4_4:-63950189 | None:intergenic |
CAACTTTAGTCAGCTTGATC+GGG | 0.462226 | 4_4:+63957713 | Msa0694620:CDS |
CCAATGTCATCTCAGTTCCT+TGG | 0.462306 | 4_4:-63950100 | None:intergenic |
AATTGTCAAAAGTGGATCTC+AGG | 0.463231 | 4_4:+63950313 | Msa0694620:CDS |
AGCTCCAAAGCTCCGGTGCC+GGG | 0.463328 | 4_4:+63950772 | Msa0694620:CDS |
CCAAATTTCATGTACAACAT+AGG | 0.464099 | 4_4:-63958055 | None:intergenic |
GTAGCCAAGGCATGCGTTGA+AGG | 0.466913 | 4_4:-63950452 | None:intergenic |
TGATTTAGGAAATTGGCAAT+TGG | 0.467451 | 4_4:+63958131 | Msa0694620:three_prime_UTR |
AACACAACATTCCTCATCTC+AGG | 0.469294 | 4_4:-63957964 | None:intergenic |
CTCAAACAATAACTGGATCT+GGG | 0.470948 | 4_4:+63956721 | Msa0694620:CDS |
ATATTTCAGCTTAAGAAAAG+AGG | 0.472622 | 4_4:+63955066 | Msa0694620:CDS |
AAAAGAGGGACACTAACATT+AGG | 0.474329 | 4_4:-63955027 | None:intergenic |
CAAGCTGATACACACCTTTG+AGG | 0.474403 | 4_4:-63952021 | None:intergenic |
TCCTGTTGTGGAGGATGCAA+TGG | 0.476491 | 4_4:+63946706 | Msa0694620:CDS |
GGCAAGTACAATGATGTAGA+AGG | 0.478982 | 4_4:-63953353 | None:intergenic |
AGACAAGAAATTATCGTTTG+AGG | 0.481689 | 4_4:+63950529 | Msa0694620:CDS |
AGTGATAGGATCAGTAATCT+AGG | 0.481967 | 4_4:+63953455 | Msa0694620:CDS |
ATTCCTCATCTCAGGAAAGA+TGG | 0.481971 | 4_4:-63957956 | None:intergenic |
GTCTAGCAGTGCTTCTGCCT+TGG | 0.482912 | 4_4:+63950625 | Msa0694620:CDS |
TTTGAAAGGTTACCCATCAC+TGG | 0.482993 | 4_4:+63953523 | Msa0694620:CDS |
ACTCAGAAATTACTCCAGAT+AGG | 0.483988 | 4_4:+63946777 | Msa0694620:CDS |
GTTATGAATTTGGCAAGCCC+AGG | 0.484130 | 4_4:+63947380 | Msa0694620:CDS |
ACACTATTGCACAAGGGATT+CGG | 0.485507 | 4_4:+63955921 | Msa0694620:CDS |
CAGATCATTCACACTCTCCA+TGG | 0.486840 | 4_4:-63946273 | None:intergenic |
TGATATTGTACGCCAGTTCA+AGG | 0.487332 | 4_4:+63953271 | Msa0694620:CDS |
AAATTTGGAAGACGGTGGTT+TGG | 0.490482 | 4_4:+63958070 | Msa0694620:three_prime_UTR |
TAGCTCCAAAGCTCCGGTGC+CGG | 0.490557 | 4_4:+63950771 | Msa0694620:CDS |
GAAAATTGATTCTCCTGTTG+TGG | 0.492238 | 4_4:+63946694 | Msa0694620:CDS |
GCAAGTTGCTTCATACATAC+AGG | 0.497120 | 4_4:-63957904 | None:intergenic |
TTAAGAAAAGAGGTTGGATA+AGG | 0.497523 | 4_4:+63955076 | Msa0694620:CDS |
CACATGTTCTCAAGATTCTC+GGG | 0.498204 | 4_4:-63950254 | None:intergenic |
ACTGAAGTAATATATATCTC+TGG | 0.498988 | 4_4:-63957758 | None:intergenic |
CAGCAACATTAGCTATTGAC+AGG | 0.499362 | 4_4:-63951965 | None:intergenic |
GACAGATATGTATGTGATCT+AGG | 0.500161 | 4_4:-63946596 | None:intergenic |
TAGGTCGTGTTGGACTCAAC+TGG | 0.500790 | 4_4:+63945997 | Msa0694620:five_prime_UTR |
TGCTGATTGGGCACAAATGT+TGG | 0.500813 | 4_4:+63950196 | Msa0694620:CDS |
ACTAAAACGTTGCAGGTTGT+GGG | 0.500935 | 4_4:+63950957 | Msa0694620:intron |
TCTTACTCGCGATAATTTGG+AGG | 0.501090 | 4_4:+63953649 | Msa0694620:CDS |
CTAAGTTGAATTCGATTTGG+AGG | 0.501754 | 4_4:-63945977 | None:intergenic |
TCCAATTCATCTGCATTCCA+AGG | 0.501892 | 4_4:-63953374 | None:intergenic |
CGAGATATTGAGCGAATCAC+GGG | 0.501991 | 4_4:-63947326 | None:intergenic |
CAAAAGGAAGAAATTACAAA+AGG | 0.502379 | 4_4:+63950279 | Msa0694620:CDS |
GATTCACTGGCTTCGGAAAG+AGG | 0.502982 | 4_4:+63955898 | Msa0694620:CDS |
TAATGTCGAATTTCGTTGGA+AGG | 0.504035 | 4_4:+63946565 | Msa0694620:CDS |
AGGATTTCGTGGTTGATTTG+TGG | 0.504295 | 4_4:+63946753 | Msa0694620:CDS |
TAGATTGTAGATGCAAGAAC+AGG | 0.505123 | 4_4:+63958096 | Msa0694620:three_prime_UTR |
CTCTCGGGAGACCTTAGTGC+TGG | 0.505208 | 4_4:-63947129 | None:intergenic |
GTATAGTCTGTTACCAGTGA+TGG | 0.505667 | 4_4:-63953536 | None:intergenic |
GATATTGTACGCCAGTTCAA+GGG | 0.507285 | 4_4:+63953272 | Msa0694620:CDS |
GATCCAGTTATTGTTTGAGA+AGG | 0.507690 | 4_4:-63956717 | None:intergenic |
AGATATATATTACTTCAGTC+AGG | 0.511847 | 4_4:+63957762 | Msa0694620:CDS |
TCAGTGATGAAGACCTTGGC+AGG | 0.513783 | 4_4:+63952179 | Msa0694620:CDS |
TTCAGCTTAAGAAAAGAGGT+TGG | 0.515152 | 4_4:+63955070 | Msa0694620:CDS |
CCGAGATATTGAGCGAATCA+CGG | 0.519630 | 4_4:-63947327 | None:intergenic |
GCTCCTTAGAGTTCAACAAA+TGG | 0.519682 | 4_4:-63947101 | None:intergenic |
TTTCTGTTAATGCAGGAGAC+AGG | 0.520489 | 4_4:+63955805 | Msa0694620:intron |
TCAGATACACGCTATAATCA+TGG | 0.521586 | 4_4:+63946811 | Msa0694620:CDS |
CTGATGGACAGAATAGAACT+TGG | 0.521866 | 4_4:+63951036 | Msa0694620:CDS |
TACTGACGAGTCCAGCAACT+TGG | 0.522257 | 4_4:+63953556 | Msa0694620:CDS |
CAAGCTCCGCACTCTTTGGT+GGG | 0.523101 | 4_4:+63946307 | Msa0694620:CDS |
TGATTTAGTAGGTGATCACT+TGG | 0.523119 | 4_4:+63946993 | Msa0694620:CDS |
GACATGATAGTTAGGAAAGA+GGG | 0.524862 | 4_4:+63950743 | Msa0694620:CDS |
TACTCAATTGCAGTGACTGA+TGG | 0.527047 | 4_4:+63951020 | Msa0694620:CDS |
GTGATCTGTCGGAGGAAGCT+AGG | 0.527680 | 4_4:+63953594 | Msa0694620:CDS |
TCTACCTTCAACGCATGCCT+TGG | 0.527916 | 4_4:+63950448 | Msa0694620:CDS |
CGTGATTCGCTCAATATCTC+GGG | 0.528206 | 4_4:+63947328 | Msa0694620:CDS |
ACAGTCAGAAGCAGAACTCT+TGG | 0.531509 | 4_4:-63950345 | None:intergenic |
GATGGTTTAAGGCGAAAAGT+TGG | 0.532809 | 4_4:+63953302 | Msa0694620:CDS |
TTTGTAAGGATGTCTCTCCC+TGG | 0.533191 | 4_4:-63950136 | None:intergenic |
GTACTTGCAACGCTTTGTAG+TGG | 0.533335 | 4_4:-63950479 | None:intergenic |
GTCAAAACAGATATTACAGC+TGG | 0.533552 | 4_4:+63955838 | Msa0694620:CDS |
CTGCCACCATTTGTTATTTG+GGG | 0.534946 | 4_4:-63956684 | None:intergenic |
TCACACCTTGTACTCACTCT+CGG | 0.535005 | 4_4:-63947145 | None:intergenic |
CTCAGAAATTACTCCAGATA+GGG | 0.535941 | 4_4:+63946778 | Msa0694620:CDS |
ACAGATATTACAGCTGGTGA+TGG | 0.538825 | 4_4:+63955844 | Msa0694620:CDS |
CACACCTTGTACTCACTCTC+GGG | 0.542690 | 4_4:-63947144 | None:intergenic |
AGAGGGACACTAACATTAGG+AGG | 0.542691 | 4_4:-63955024 | None:intergenic |
AAAGGCATCATCAGTGTTCG+AGG | 0.544346 | 4_4:-63951608 | None:intergenic |
TTGTCAACCAAATTCAAAAG+AGG | 0.545274 | 4_4:-63955042 | None:intergenic |
GGATTACCCCAAATAACAAA+TGG | 0.545345 | 4_4:+63956678 | Msa0694620:CDS |
GGTTTAAGGCGAAAAGTTGG+TGG | 0.548757 | 4_4:+63953305 | Msa0694620:CDS |
AACATTATCTACAGAAGAGA+GGG | 0.551246 | 4_4:+63947062 | Msa0694620:CDS |
AGCTACCTTCTTGATTAGGG+TGG | 0.551883 | 4_4:-63950652 | None:intergenic |
ACAAAGGACCATGCTTCTGA+AGG | 0.554554 | 4_4:+63950581 | Msa0694620:CDS |
AGGAGCTTCATCCAGCACTA+AGG | 0.554669 | 4_4:+63947118 | Msa0694620:CDS |
TTCTTCAGTGATGAAGACCT+TGG | 0.556745 | 4_4:+63952175 | Msa0694620:CDS |
TCTCCATCTTTCCTGAGATG+AGG | 0.557282 | 4_4:+63957953 | Msa0694620:CDS |
TCTATCTAGTGTGCTTCCCC+CGG | 0.559212 | 4_4:+63946658 | Msa0694620:CDS |
GTCTCCCGAGAGTGAGTACA+AGG | 0.560164 | 4_4:+63947140 | Msa0694620:CDS |
TGGAAGACGCTATTGATGAT+TGG | 0.560447 | 4_4:+63955864 | Msa0694620:CDS |
GATAATTTGGAGGATCCTGT+TGG | 0.562138 | 4_4:+63953659 | Msa0694620:CDS |
GAATTCAACTTAGGTCGTGT+TGG | 0.564605 | 4_4:+63945987 | Msa0694620:five_prime_UTR |
AGATCATTCACACTCTCCAT+GGG | 0.565955 | 4_4:-63946272 | None:intergenic |
TGACATGATAGTTAGGAAAG+AGG | 0.566809 | 4_4:+63950742 | Msa0694620:CDS |
CTATTGATGATTGGCTCTTG+AGG | 0.567715 | 4_4:+63955873 | Msa0694620:CDS |
CAAAATTGCATACCCGGCAC+CGG | 0.570244 | 4_4:-63950784 | None:intergenic |
TTGATTAGGGTGGATTGCCA+AGG | 0.571026 | 4_4:-63950642 | None:intergenic |
TTCAACGCATGCCTTGGCTA+CGG | 0.571209 | 4_4:+63950454 | Msa0694620:CDS |
TATAGTCTGTTACCAGTGAT+GGG | 0.573413 | 4_4:-63953535 | None:intergenic |
GGCCCCTCATTGATGAGGGA+TGG | 0.575821 | 4_4:-63953332 | None:intergenic |
CTCCAAATCGAATTCAACTT+AGG | 0.577430 | 4_4:+63945978 | Msa0694620:five_prime_UTR |
CCGGAATTTGAGAGGCGCGA+AGG | 0.578136 | 4_4:+63950698 | Msa0694620:CDS |
GCTCAGAGTTGATAAAGTGA+AGG | 0.578324 | 4_4:+63950556 | Msa0694620:CDS |
CCGAGAATCTTGAGAACATG+TGG | 0.578801 | 4_4:+63950255 | Msa0694620:CDS |
CAAAGGACCATGCTTCTGAA+GGG | 0.578907 | 4_4:+63950582 | Msa0694620:CDS |
AAGAAACAGTATGTAATACC+TGG | 0.578957 | 4_4:-63946136 | None:intergenic |
GATGAAGAACTCACGGCGCT+TGG | 0.582116 | 4_4:-63958014 | None:intergenic |
TCACCATCCCTCATCAATGA+GGG | 0.582691 | 4_4:+63953329 | Msa0694620:CDS |
TGATAGACAGCGTGATCTGT+CGG | 0.584287 | 4_4:+63953583 | Msa0694620:CDS |
TGTGTTAAGTTCTGATACTG+AGG | 0.584709 | 4_4:+63953430 | Msa0694620:CDS |
TAGAAGTTCCAGAATTGCAT+AGG | 0.584754 | 4_4:-63957926 | None:intergenic |
TGATTGGGCACAAATGTTGG+AGG | 0.587274 | 4_4:+63950199 | Msa0694620:CDS |
GCAATCCACCCTAATCAAGA+AGG | 0.589850 | 4_4:+63950647 | Msa0694620:CDS |
CTCAGAGTTGATAAAGTGAA+GGG | 0.590030 | 4_4:+63950557 | Msa0694620:CDS |
ATTGGCCAAAATGAGTGACC+AGG | 0.595103 | 4_4:+63950118 | Msa0694620:CDS |
TGTCAACCAAATTCAAAAGA+GGG | 0.595928 | 4_4:-63955041 | None:intergenic |
AATGTAGCAAGTCATCATCA+TGG | 0.596509 | 4_4:+63950011 | Msa0694620:CDS |
ACTGGTGAGGAAATAAGAAA+CGG | 0.596825 | 4_4:-63946345 | None:intergenic |
GTCAGAAGCAGAACTCTTGG+TGG | 0.599173 | 4_4:-63950342 | None:intergenic |
TTATGAATTTGGCAAGCCCA+GGG | 0.600445 | 4_4:+63947381 | Msa0694620:CDS |
GAGAGGCGCGAAGGATTTCG+GGG | 0.601061 | 4_4:+63950707 | Msa0694620:CDS |
CACATGTGATGAAGAACTCA+CGG | 0.604085 | 4_4:-63958021 | None:intergenic |
AACGATGAAGAAGAAACCCA+TGG | 0.606840 | 4_4:+63946256 | Msa0694620:exon |
AACTCTGTTGCTAATAGCGG+CGG | 0.607664 | 4_4:+63950035 | Msa0694620:CDS |
TGATAAAGTGAAGGGTACAA+AGG | 0.608098 | 4_4:+63950565 | Msa0694620:CDS |
ATCACCATCCCTCATCAATG+AGG | 0.608597 | 4_4:+63953328 | Msa0694620:CDS |
TAGAAGGCCCCTCATTGATG+AGG | 0.608644 | 4_4:-63953337 | None:intergenic |
AAAAGTGAAACTTACTGGTG+AGG | 0.612892 | 4_4:-63946358 | None:intergenic |
TTTCAGGTCCTCTGGCCTGG+TGG | 0.613712 | 4_4:+63956636 | Msa0694620:intron |
CGTGAGTTCTTCATCACATG+TGG | 0.614978 | 4_4:+63958022 | Msa0694620:exon |
CAAACAATAACTGGATCTGG+GGG | 0.614994 | 4_4:+63956723 | Msa0694620:CDS |
TCAAACAATAACTGGATCTG+GGG | 0.615435 | 4_4:+63956722 | Msa0694620:CDS |
TCAGTTCCTTGGTATAAAGG+TGG | 0.619427 | 4_4:-63950089 | None:intergenic |
TAATAAGAGGATACCTGCCA+AGG | 0.620262 | 4_4:-63952192 | None:intergenic |
ACAAAATCCCCATGAAAATG+GGG | 0.620395 | 4_4:-63958251 | None:intergenic |
GAAACGTTAGTGAGTAAACA+TGG | 0.620799 | 4_4:+63950395 | Msa0694620:CDS |
GGTAACTCTGTTGCTAATAG+CGG | 0.621046 | 4_4:+63950032 | Msa0694620:CDS |
CTATTGCACAAGGGATTCGG+TGG | 0.621228 | 4_4:+63955924 | Msa0694620:CDS |
TGTTGTAGCACTTTGCTGTG+TGG | 0.621233 | 4_4:-63953405 | None:intergenic |
TCTTGCTGAAATATCAGCGA+GGG | 0.621365 | 4_4:+63946838 | Msa0694620:CDS |
TGCTGAACAACATGAAGTAT+GGG | 0.622281 | 4_4:+63951983 | Msa0694620:CDS |
ATATTGTACGCCAGTTCAAG+GGG | 0.623871 | 4_4:+63953273 | Msa0694620:CDS |
AAACATTATCTACAGAAGAG+AGG | 0.626948 | 4_4:+63947061 | Msa0694620:CDS |
AATTGATTCTCCTGTTGTGG+AGG | 0.630990 | 4_4:+63946697 | Msa0694620:CDS |
TCAGAAGCAGAACTCTTGGT+GGG | 0.631804 | 4_4:-63950341 | None:intergenic |
TTGTAGTGGATCCGTAGCCA+AGG | 0.632370 | 4_4:-63950465 | None:intergenic |
TCCTGTTGGAGTGCCACCTG+AGG | 0.632724 | 4_4:+63953673 | Msa0694620:CDS |
GAGGGACACTAACATTAGGA+GGG | 0.632912 | 4_4:-63955023 | None:intergenic |
GGCATGCGTTGAAGGTAGAG+AGG | 0.639200 | 4_4:-63950444 | None:intergenic |
TGAGTAGACAGCAAAAGATG+TGG | 0.639580 | 4_4:-63951003 | None:intergenic |
CCAAGGAACTGAGATGACAT+TGG | 0.639721 | 4_4:+63950100 | Msa0694620:CDS |
CAGATACAAGTAAATCGATG+TGG | 0.645726 | 4_4:+63946489 | Msa0694620:intron |
AGAGAGCCCACCAAAGAGTG+CGG | 0.646390 | 4_4:-63946313 | None:intergenic |
AAAGAGGACACTATTGCACA+AGG | 0.651055 | 4_4:+63955914 | Msa0694620:CDS |
ATCTTGTCGACTTGTTGACA+AGG | 0.652613 | 4_4:+63946873 | Msa0694620:CDS |
AGAAGGCCCCTCATTGATGA+GGG | 0.652966 | 4_4:-63953336 | None:intergenic |
AAAACTTACCACCAGGCCAG+AGG | 0.653092 | 4_4:-63956644 | None:intergenic |
TTACCCCAAATAACAAATGG+TGG | 0.655508 | 4_4:+63956681 | Msa0694620:CDS |
CACCATCCCTCATCAATGAG+GGG | 0.658813 | 4_4:+63953330 | Msa0694620:CDS |
TGTTGGAGGTTGCAACTCAG+AGG | 0.658967 | 4_4:+63950213 | Msa0694620:CDS |
ACATGAAATTTGGAAGACGG+TGG | 0.663547 | 4_4:+63958065 | Msa0694620:three_prime_UTR |
AGGTTGTTGATGATTTGTAA+CGG | 0.664662 | 4_4:+63946217 | Msa0694620:five_prime_UTR |
TAAAGGTGGATGCTTACTAG+AGG | 0.667472 | 4_4:-63950075 | None:intergenic |
TGTACATGAAATTTGGAAGA+CGG | 0.667977 | 4_4:+63958062 | Msa0694620:three_prime_UTR |
CAGCCTACACATACCTCAGG+TGG | 0.668348 | 4_4:-63953686 | None:intergenic |
ACATGATAGTTAGGAAAGAG+GGG | 0.669528 | 4_4:+63950744 | Msa0694620:CDS |
CGAGAATCTTGAGAACATGT+GGG | 0.676043 | 4_4:+63950256 | Msa0694620:CDS |
AGTAAATGTAGATGATGCTG+TGG | 0.677534 | 4_4:+63953247 | Msa0694620:intron |
TTGGCCAAAATGAGTGACCA+GGG | 0.681969 | 4_4:+63950119 | Msa0694620:CDS |
AAGCATCCACCTTTATACCA+AGG | 0.684251 | 4_4:+63950083 | Msa0694620:CDS |
GTCGTGTTGGACTCAACTGG+TGG | 0.692378 | 4_4:+63946000 | Msa0694620:five_prime_UTR |
CAAACAAATAGAATTGACAT+CGG | 0.705401 | 4_4:-63946521 | None:intergenic |
AGGGACACTAACATTAGGAG+GGG | 0.709938 | 4_4:-63955022 | None:intergenic |
TAGACAGCGTGATCTGTCGG+AGG | 0.710399 | 4_4:+63953586 | Msa0694620:CDS |
AAGAGGACACTATTGCACAA+GGG | 0.711968 | 4_4:+63955915 | Msa0694620:CDS |
TTCTTGCTGAAATATCAGCG+AGG | 0.728738 | 4_4:+63946837 | Msa0694620:CDS |
TATTGTACGCCAGTTCAAGG+GGG | 0.741462 | 4_4:+63953274 | Msa0694620:CDS |
AAACAATAACTGGATCTGGG+GGG | 0.752214 | 4_4:+63956724 | Msa0694620:CDS |
GGAAGCACACTAGATAGACG+CGG | 0.760671 | 4_4:-63946653 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATCTAACATTAATAAAAA+AGG | - | chr4_4:63948537-63948556 | None:intergenic | 10.0% |
!! | AAATATAAATCTTAAAGTTT+CGG | - | chr4_4:63949115-63949134 | None:intergenic | 10.0% |
!!! | AAACTTTAAGATTTATATTT+AGG | + | chr4_4:63949115-63949134 | Msa0694620:intron | 10.0% |
!!! | ATATGTTTATTTTTTAAATC+AGG | - | chr4_4:63949801-63949820 | None:intergenic | 10.0% |
!!! | TAAAGATAGAAATATTTTTT+TGG | + | chr4_4:63951738-63951757 | Msa0694620:intron | 10.0% |
!!! | TTCTTATTATTGTATTTTAA+TGG | - | chr4_4:63952414-63952433 | None:intergenic | 10.0% |
!! | ATTATTTATTATTTATTAGC+TGG | + | chr4_4:63953806-63953825 | Msa0694620:intron | 10.0% |
!!! | TTTTCATAATACTTTATCTT+TGG | - | chr4_4:63946929-63946948 | None:intergenic | 15.0% |
!! | TTCTGATTTATTTAAATTTC+AGG | + | chr4_4:63946962-63946981 | Msa0694620:intron | 15.0% |
!! | TCTGATTTATTTAAATTTCA+GGG | + | chr4_4:63946963-63946982 | Msa0694620:intron | 15.0% |
!! | AAAAGAAACATATATATCAT+TGG | - | chr4_4:63947189-63947208 | None:intergenic | 15.0% |
!! | AATAAAAGTTAGAAAGATAA+TGG | + | chr4_4:63947865-63947884 | Msa0694620:intron | 15.0% |
!! | ATAAAAGTTAGAAAGATAAT+GGG | + | chr4_4:63947866-63947885 | Msa0694620:intron | 15.0% |
!! | TTAGACATGAAAATATAATT+TGG | - | chr4_4:63951389-63951408 | None:intergenic | 15.0% |
!!! | TTACTTACCATAATATATTT+TGG | + | chr4_4:63951492-63951511 | Msa0694620:intron | 15.0% |
!!! | AGATAATTTAAAAGTATGAA+AGG | - | chr4_4:63951910-63951929 | None:intergenic | 15.0% |
!!! | ATACTTTTAAATTATCTCTT+TGG | + | chr4_4:63951913-63951932 | Msa0694620:intron | 15.0% |
!! | AAAATGTTACAATTAATAAG+AGG | - | chr4_4:63952208-63952227 | None:intergenic | 15.0% |
!! | TGTATATTAGTAGAAAAATA+TGG | - | chr4_4:63952709-63952728 | None:intergenic | 15.0% |
!!! | GTAATTTTTATGTTGAAATT+AGG | + | chr4_4:63952904-63952923 | Msa0694620:intron | 15.0% |
!! | GTTATATATCTATTTATAAG+AGG | + | chr4_4:63953055-63953074 | Msa0694620:intron | 15.0% |
!!! | ATGTTAGTTTGATAAAAATA+AGG | + | chr4_4:63954145-63954164 | Msa0694620:intron | 15.0% |
!! | TAAATACAAATAGAAAACAT+GGG | + | chr4_4:63954536-63954555 | Msa0694620:intron | 15.0% |
!!! | TGTTTTAAATTGTTACTTTT+AGG | + | chr4_4:63955618-63955637 | Msa0694620:intron | 15.0% |
!!! | TTTTCAAACTTTTTTTTTTC+TGG | + | chr4_4:63955963-63955982 | Msa0694620:intron | 15.0% |
!!! | TTTCAAACTTTTTTTTTTCT+GGG | + | chr4_4:63955964-63955983 | Msa0694620:intron | 15.0% |
!! | AAATAACAAAATATACAAGT+AGG | - | chr4_4:63956932-63956951 | None:intergenic | 15.0% |
!! | GAGCAGAAAAATAATATTAA+TGG | - | chr4_4:63946080-63946099 | None:intergenic | 20.0% |
!!! | TTTCATTGATAAGATTTTGA+AGG | + | chr4_4:63946733-63946752 | Msa0694620:CDS | 20.0% |
!!! | TTTTGTGATAATTACTTTTC+TGG | + | chr4_4:63947435-63947454 | Msa0694620:intron | 20.0% |
!!! | TTTGTGATAATTACTTTTCT+GGG | + | chr4_4:63947436-63947455 | Msa0694620:intron | 20.0% |
!!! | TTTTAAGTTGTGTTTATGTA+GGG | + | chr4_4:63947527-63947546 | Msa0694620:intron | 20.0% |
!! | AAAACAGAATAAAATCACTT+CGG | - | chr4_4:63947728-63947747 | None:intergenic | 20.0% |
!!! | TTTAAAATTGATACCATCAA+TGG | - | chr4_4:63947802-63947821 | None:intergenic | 20.0% |
!!! | ATCAGATTTTAATAAGTCAA+AGG | + | chr4_4:63947821-63947840 | Msa0694620:intron | 20.0% |
!! | TTAATGTATAATAAATACGG+AGG | - | chr4_4:63947992-63948011 | None:intergenic | 20.0% |
!! | AGAGAGAAAATATTGATAAA+TGG | + | chr4_4:63948669-63948688 | Msa0694620:intron | 20.0% |
!! | GAGAGAAAATATTGATAAAT+GGG | + | chr4_4:63948670-63948689 | Msa0694620:intron | 20.0% |
!! | GATAAAACCAAAACAAAATT+GGG | - | chr4_4:63948914-63948933 | None:intergenic | 20.0% |
!!! | CAATTTTGTTTTGGTTTTAT+CGG | + | chr4_4:63948913-63948932 | Msa0694620:intron | 20.0% |
!!! | AATTTTGTTTTGGTTTTATC+GGG | + | chr4_4:63948914-63948933 | Msa0694620:intron | 20.0% |
!! | TATACTATATATGTCTAACA+TGG | + | chr4_4:63949233-63949252 | Msa0694620:intron | 20.0% |
!! | TTACATGGTTAATTACTTTA+TGG | + | chr4_4:63949335-63949354 | Msa0694620:intron | 20.0% |
!! | AAAGTAATTAACCAATCATA+GGG | - | chr4_4:63949361-63949380 | None:intergenic | 20.0% |
!! | TAAAGTAATTAACCAATCAT+AGG | - | chr4_4:63949362-63949381 | None:intergenic | 20.0% |
!!! | ATGATTGGTTAATTACTTTA+TGG | + | chr4_4:63949362-63949381 | Msa0694620:intron | 20.0% |
!! | TTAGTAATTAACCAATTATG+GGG | - | chr4_4:63949388-63949407 | None:intergenic | 20.0% |
!! | CTTAGTAATTAACCAATTAT+GGG | - | chr4_4:63949389-63949408 | None:intergenic | 20.0% |
!!! | ATCATTTTTTATTCATGAGA+TGG | + | chr4_4:63949819-63949838 | Msa0694620:intron | 20.0% |
!!! | TTGCATATTTTATTACAAGT+AGG | - | chr4_4:63949893-63949912 | None:intergenic | 20.0% |
!! | GGTATAAAATTTCATTAAAG+AGG | + | chr4_4:63950603-63950622 | Msa0694620:CDS | 20.0% |
!! | TACCATTCTGATTTATAAAA+GGG | - | chr4_4:63950886-63950905 | None:intergenic | 20.0% |
!! | ATACCATTCTGATTTATAAA+AGG | - | chr4_4:63950887-63950906 | None:intergenic | 20.0% |
!! | TAATTACAAAATAAAATGCC+AGG | + | chr4_4:63951359-63951378 | Msa0694620:intron | 20.0% |
!! | AGTAAAGTCATATATAAAGA+TGG | - | chr4_4:63951477-63951496 | None:intergenic | 20.0% |
!! | TATACCACCAAAATATATTA+TGG | - | chr4_4:63951502-63951521 | None:intergenic | 20.0% |
!!! | TACCTTTTTATAATCTCTAT+TGG | + | chr4_4:63952072-63952091 | Msa0694620:intron | 20.0% |
!!! | ATTGTATTTTAATGGTAAGT+AGG | - | chr4_4:63952406-63952425 | None:intergenic | 20.0% |
!!! | TACAACGATGTATTTTAAAT+AGG | + | chr4_4:63952584-63952603 | Msa0694620:intron | 20.0% |
!!! | ACAACGATGTATTTTAAATA+GGG | + | chr4_4:63952585-63952604 | Msa0694620:intron | 20.0% |
!! | TTCATATCAAAATTATGCAT+TGG | + | chr4_4:63952833-63952852 | Msa0694620:intron | 20.0% |
!!! | TTCTTTTCTTCTTTTTGTTT+GGG | - | chr4_4:63953975-63953994 | None:intergenic | 20.0% |
!!! | ATTCTTTTCTTCTTTTTGTT+TGG | - | chr4_4:63953976-63953995 | None:intergenic | 20.0% |
!! | CTAAATACAAATAGAAAACA+TGG | + | chr4_4:63954535-63954554 | Msa0694620:intron | 20.0% |
!!! | TATTTCCAACATTTGTTTTT+TGG | + | chr4_4:63954718-63954737 | Msa0694620:intron | 20.0% |
!! | TTCATAAATTATTAAACGAG+AGG | + | chr4_4:63954742-63954761 | Msa0694620:intron | 20.0% |
!! | AATTTGAATATAACAATGAG+AGG | - | chr4_4:63955384-63955403 | None:intergenic | 20.0% |
!!! | TTTTGAATTCTGTTACTTTT+AGG | + | chr4_4:63955514-63955533 | Msa0694620:intron | 20.0% |
!! | AAATAAATGGCAATTTAATC+AGG | - | chr4_4:63956068-63956087 | None:intergenic | 20.0% |
!!! | TTAAATTGCCATTTATTTGT+TGG | + | chr4_4:63956070-63956089 | Msa0694620:intron | 20.0% |
!!! | ATGTATATGGCTTATTTTTT+GGG | - | chr4_4:63956189-63956208 | None:intergenic | 20.0% |
!! | ATAAAATCATGTTATGACAT+TGG | + | chr4_4:63956580-63956599 | Msa0694620:intron | 20.0% |
!!! | ACTCTTTTTACAAATTGATT+GGG | + | chr4_4:63957083-63957102 | Msa0694620:intron | 20.0% |
!! | AAAAGTAATATGATAAGTTG+TGG | + | chr4_4:63957107-63957126 | Msa0694620:intron | 20.0% |
!! | AATTGGAAATTTGCAATAAT+TGG | + | chr4_4:63957373-63957392 | Msa0694620:intron | 20.0% |
!!! | TGAATTATAGGGTATTATTT+CGG | + | chr4_4:63957436-63957455 | Msa0694620:intron | 20.0% |
!!! | ATATCTAAGTTTTATACAGT+TGG | - | chr4_4:63958171-63958190 | None:intergenic | 20.0% |
!! | ACTGTATAAAACTTAGATAT+AGG | + | chr4_4:63958171-63958190 | Msa0694620:three_prime_UTR | 20.0% |
!!! | ATTTTGTATTGTTACAGATA+GGG | + | chr4_4:63958267-63958286 | Msa0694620:three_prime_UTR | 20.0% |
! | TGGAATATTCTTTGTATTGT+GGG | - | chr4_4:63946060-63946079 | None:intergenic | 25.0% |
! | ATGGAATATTCTTTGTATTG+TGG | - | chr4_4:63946061-63946080 | None:intergenic | 25.0% |
! | ATTCAATTCAATTCAATTCC+AGG | + | chr4_4:63946118-63946137 | Msa0694620:five_prime_UTR | 25.0% |
!!! | TGTTTTTGTCTTGTTTGTTT+TGG | - | chr4_4:63946178-63946197 | None:intergenic | 25.0% |
!!! | GATTAGTCTTTATTCATCTT+AGG | + | chr4_4:63946408-63946427 | Msa0694620:intron | 25.0% |
! | CAAACAAATAGAATTGACAT+CGG | - | chr4_4:63946524-63946543 | None:intergenic | 25.0% |
! | TAAATAATGTCGAATTTCGT+TGG | + | chr4_4:63946561-63946580 | Msa0694620:CDS | 25.0% |
!!! | ACTTTTTAGAAGAAATCAAG+CGG | + | chr4_4:63947017-63947036 | Msa0694620:CDS | 25.0% |
!!! | TTGTGATAATTACTTTTCTG+GGG | + | chr4_4:63947437-63947456 | Msa0694620:intron | 25.0% |
! | GAAATGGATCTTAACAATAT+GGG | + | chr4_4:63947459-63947478 | Msa0694620:intron | 25.0% |
!!! | CTTTTAAGTTGTGTTTATGT+AGG | + | chr4_4:63947526-63947545 | Msa0694620:intron | 25.0% |
! | TGTAGGTCAAAAACATATTT+AGG | + | chr4_4:63947564-63947583 | Msa0694620:intron | 25.0% |
! | GTAGGTCAAAAACATATTTA+GGG | + | chr4_4:63947565-63947584 | Msa0694620:intron | 25.0% |
! | AATACATGAAGATACAAAAG+AGG | + | chr4_4:63947609-63947628 | Msa0694620:intron | 25.0% |
! | ATACATGAAGATACAAAAGA+GGG | + | chr4_4:63947610-63947629 | Msa0694620:intron | 25.0% |
! | GAAAATGATATTCATCGTTA+TGG | + | chr4_4:63947639-63947658 | Msa0694620:intron | 25.0% |
!! | GAAGTGATTTTATTCTGTTT+TGG | + | chr4_4:63947727-63947746 | Msa0694620:intron | 25.0% |
! | AAACTAGAAAGATTATGATG+AGG | + | chr4_4:63947776-63947795 | Msa0694620:intron | 25.0% |
! | AAGTATGTATAACTATCTGA+CGG | - | chr4_4:63948765-63948784 | None:intergenic | 25.0% |
! | CGATAAAACCAAAACAAAAT+TGG | - | chr4_4:63948915-63948934 | None:intergenic | 25.0% |
!! | TTAAACTTTTATGAGATCCT+TGG | - | chr4_4:63949184-63949203 | None:intergenic | 25.0% |
! | TCATAAAAGTTTAAGCTGTT+GGG | + | chr4_4:63949190-63949209 | Msa0694620:intron | 25.0% |
! | GAATGAATTATAAAACTCAG+TGG | - | chr4_4:63949310-63949329 | None:intergenic | 25.0% |
! | GCTTAGTAATTAACCAATTA+TGG | - | chr4_4:63949390-63949409 | None:intergenic | 25.0% |
! | TCAACTCTTTAATGAATGAA+TGG | + | chr4_4:63949609-63949628 | Msa0694620:intron | 25.0% |
!! | TTTTTAAATCAGGAAGCAAA+TGG | - | chr4_4:63949791-63949810 | None:intergenic | 25.0% |
! | TATTCATGAGATGGAAATAT+TGG | + | chr4_4:63949828-63949847 | Msa0694620:intron | 25.0% |
! | ATTCATGAGATGGAAATATT+GGG | + | chr4_4:63949829-63949848 | Msa0694620:intron | 25.0% |
!! | AATATGCAAATCTTTTTGTC+AGG | + | chr4_4:63949904-63949923 | Msa0694620:intron | 25.0% |
!!! | ATGGACTGAATTATTTTGTA+AGG | - | chr4_4:63950153-63950172 | None:intergenic | 25.0% |
! | CAAAAGGAAGAAATTACAAA+AGG | + | chr4_4:63950279-63950298 | Msa0694620:CDS | 25.0% |
!!! | GTTGAAAAACTCTGAAATAA+TGG | - | chr4_4:63950678-63950697 | None:intergenic | 25.0% |
!! | TACCCTTTTATAAATCAGAA+TGG | + | chr4_4:63950881-63950900 | Msa0694620:intron | 25.0% |
! | ATATGAACTGGATTTATACA+AGG | + | chr4_4:63951149-63951168 | Msa0694620:intron | 25.0% |
! | AGCAGTTTAAACTCAAAAAA+GGG | - | chr4_4:63951234-63951253 | None:intergenic | 25.0% |
! | TTAGAAACCCAAAGAAATTA+TGG | - | chr4_4:63951342-63951361 | None:intergenic | 25.0% |
!! | AAAATATAATTTGGTGATCC+TGG | - | chr4_4:63951380-63951399 | None:intergenic | 25.0% |
!! | CAGTTTAAAACTTAAAACAG+GGG | - | chr4_4:63951421-63951440 | None:intergenic | 25.0% |
!! | GCAGTTTAAAACTTAAAACA+GGG | - | chr4_4:63951422-63951441 | None:intergenic | 25.0% |
!! | AGCAGTTTAAAACTTAAAAC+AGG | - | chr4_4:63951423-63951442 | None:intergenic | 25.0% |
!!! | CTTACCATAATATATTTTGG+TGG | + | chr4_4:63951495-63951514 | Msa0694620:intron | 25.0% |
! | TCCTTGTTGCAATAATAAAT+AGG | + | chr4_4:63951679-63951698 | Msa0694620:intron | 25.0% |
! | CCTTGTTGCAATAATAAATA+GGG | + | chr4_4:63951680-63951699 | Msa0694620:intron | 25.0% |
! | TTGCAATAATAAATAGGGAA+AGG | + | chr4_4:63951685-63951704 | Msa0694620:intron | 25.0% |
! | TGCAATAATAAATAGGGAAA+GGG | + | chr4_4:63951686-63951705 | Msa0694620:intron | 25.0% |
! | CAAGTTAAGGAACTAAAAAA+AGG | - | chr4_4:63951832-63951851 | None:intergenic | 25.0% |
! | CACCAATAGAGATTATAAAA+AGG | - | chr4_4:63952077-63952096 | None:intergenic | 25.0% |
!!! | TAATCTCTATTGGTGATTTT+TGG | + | chr4_4:63952082-63952101 | Msa0694620:intron | 25.0% |
! | AAGTTTAGAAATTAGAATCC+AGG | + | chr4_4:63952244-63952263 | Msa0694620:intron | 25.0% |
!!! | TGTCAATCTTGAGTTTTTTT+TGG | + | chr4_4:63952298-63952317 | Msa0694620:intron | 25.0% |
! | TGCTTAATAGAATGTTTGAT+TGG | + | chr4_4:63952344-63952363 | Msa0694620:intron | 25.0% |
! | TAAGAAAAATCGAATAGAAG+TGG | + | chr4_4:63952428-63952447 | Msa0694620:intron | 25.0% |
!!! | CAACGATGTATTTTAAATAG+GGG | + | chr4_4:63952586-63952605 | Msa0694620:intron | 25.0% |
!!! | AACGATGTATTTTAAATAGG+GGG | + | chr4_4:63952587-63952606 | Msa0694620:intron | 25.0% |
! | CAAAGTAGGTCATTTAAATT+GGG | - | chr4_4:63952654-63952673 | None:intergenic | 25.0% |
! | TCAAAGTAGGTCATTTAAAT+TGG | - | chr4_4:63952655-63952674 | None:intergenic | 25.0% |
!! | ATAATGCACATTTTCAAAGT+AGG | - | chr4_4:63952668-63952687 | None:intergenic | 25.0% |
!!! | CATAACATATAAGTTGATGT+TGG | + | chr4_4:63952738-63952757 | Msa0694620:intron | 25.0% |
! | TCAACTGTGTCATATAATAT+GGG | + | chr4_4:63952870-63952889 | Msa0694620:intron | 25.0% |
! | CAAAACAGTTTCTATCAATT+AGG | - | chr4_4:63952989-63953008 | None:intergenic | 25.0% |
!!! | TAGTTTTCTTTGTTTATCAG+TGG | + | chr4_4:63953117-63953136 | Msa0694620:intron | 25.0% |
! | CTTCTCTATCAAAATTATCA+TGG | - | chr4_4:63953481-63953500 | None:intergenic | 25.0% |
!!! | GATAATGCATTGATTTTGAA+AGG | + | chr4_4:63953509-63953528 | Msa0694620:CDS | 25.0% |
!!! | TCTTTTCTTCTTTTTGTTTG+GGG | - | chr4_4:63953974-63953993 | None:intergenic | 25.0% |
!!! | TTCAAAAGATTTTCAAGTAC+CGG | + | chr4_4:63954316-63954335 | Msa0694620:intron | 25.0% |
! | TAATATGCAAGCAAATTCTA+TGG | - | chr4_4:63954369-63954388 | None:intergenic | 25.0% |
! | AATTAATTGATAAAGCTTCG+CGG | + | chr4_4:63954389-63954408 | Msa0694620:intron | 25.0% |
! | CTATTTGTATTTAGTCAACA+AGG | - | chr4_4:63954529-63954548 | None:intergenic | 25.0% |
! | TACATCTAATCATTCCAAAA+GGG | - | chr4_4:63954584-63954603 | None:intergenic | 25.0% |
! | ATACATCTAATCATTCCAAA+AGG | - | chr4_4:63954585-63954604 | None:intergenic | 25.0% |
! | AGAACAATTCTATGAAAGTT+AGG | - | chr4_4:63954646-63954665 | None:intergenic | 25.0% |
! | TAACTTTCATAGAATTGTTC+TGG | + | chr4_4:63954645-63954664 | Msa0694620:intron | 25.0% |
! | TGAAACCAAAAAACAAATGT+TGG | - | chr4_4:63954726-63954745 | None:intergenic | 25.0% |
!! | AAGAATAATGATTGATAACC+TGG | + | chr4_4:63954862-63954881 | Msa0694620:intron | 25.0% |
!!! | TAGTTTGATATTTTTTGCAG+TGG | + | chr4_4:63954998-63955017 | Msa0694620:intron | 25.0% |
! | ATATTTCAGCTTAAGAAAAG+AGG | + | chr4_4:63955066-63955085 | Msa0694620:CDS | 25.0% |
! | ATTTAAAAGAGTAACACCAA+AGG | - | chr4_4:63955213-63955232 | None:intergenic | 25.0% |
!!! | TTCTAAAATCATGAGATGTT+AGG | - | chr4_4:63955322-63955341 | None:intergenic | 25.0% |
! | TAAAACGCTAACATATCAAA+AGG | - | chr4_4:63955353-63955372 | None:intergenic | 25.0% |
!! | GGTTTTACTACACAAAATAA+GGG | + | chr4_4:63955648-63955667 | Msa0694620:intron | 25.0% |
!!! | TGTTGATTTGTTTAATTACC+TGG | + | chr4_4:63955758-63955777 | Msa0694620:intron | 25.0% |
! | TTGCAAATAGATACTCTAAT+CGG | + | chr4_4:63956140-63956159 | Msa0694620:intron | 25.0% |
!!! | GATGTATATGGCTTATTTTT+TGG | - | chr4_4:63956190-63956209 | None:intergenic | 25.0% |
! | AAGATACAAGATGATGTATA+TGG | - | chr4_4:63956202-63956221 | None:intergenic | 25.0% |
!! | AATTTGAGATCAGTTGTTAT+TGG | + | chr4_4:63956870-63956889 | Msa0694620:intron | 25.0% |
! | GATTGACCATGATAAATAAT+CGG | - | chr4_4:63957024-63957043 | None:intergenic | 25.0% |
!! | CACTCTTTTTACAAATTGAT+TGG | + | chr4_4:63957082-63957101 | Msa0694620:intron | 25.0% |
! | ATTCTCATGTATTTGTCAAA+CGG | + | chr4_4:63957298-63957317 | Msa0694620:intron | 25.0% |
! | AATTAATATAACTAGACCAC+AGG | + | chr4_4:63957336-63957355 | Msa0694620:intron | 25.0% |
! | ATTAATATAACTAGACCACA+GGG | + | chr4_4:63957337-63957356 | Msa0694620:intron | 25.0% |
! | AATTTGCAATAATTGGAACT+AGG | + | chr4_4:63957380-63957399 | Msa0694620:intron | 25.0% |
!!! | TCCTTTCATATTTTTTATGC+TGG | - | chr4_4:63957462-63957481 | None:intergenic | 25.0% |
! | TGTATGTTAGAATCTTGTAA+AGG | + | chr4_4:63957602-63957621 | Msa0694620:intron | 25.0% |
! | TAGGATGTAAATTATGAGAA+TGG | - | chr4_4:63957644-63957663 | None:intergenic | 25.0% |
! | ACTGAAGTAATATATATCTC+TGG | - | chr4_4:63957761-63957780 | None:intergenic | 25.0% |
! | AGATATATATTACTTCAGTC+AGG | + | chr4_4:63957762-63957781 | Msa0694620:CDS | 25.0% |
!! | CTTGTGTTTGCATTAATTTT+TGG | + | chr4_4:63957831-63957850 | Msa0694620:intron | 25.0% |
!! | GATTTTGTATTGTTACAGAT+AGG | + | chr4_4:63958266-63958285 | Msa0694620:three_prime_UTR | 25.0% |
! | TTCTTTATTCGTTTAGTCAT+TGG | + | chr4_4:63958319-63958338 | Msa0694620:three_prime_UTR | 25.0% |
! | TCTTTATTCGTTTAGTCATT+GGG | + | chr4_4:63958320-63958339 | Msa0694620:three_prime_UTR | 25.0% |
AAGAAACAGTATGTAATACC+TGG | - | chr4_4:63946139-63946158 | None:intergenic | 30.0% | |
!!! | TTGTCTTGTTTGTTTTGGTT+TGG | - | chr4_4:63946173-63946192 | None:intergenic | 30.0% |
!! | AGGTTGTTGATGATTTGTAA+CGG | + | chr4_4:63946217-63946236 | Msa0694620:five_prime_UTR | 30.0% |
GCAAAAAAAGTGAAACTTAC+TGG | - | chr4_4:63946366-63946385 | None:intergenic | 30.0% | |
! | ACAAACACACTATAGTCTTA+TGG | - | chr4_4:63946439-63946458 | None:intergenic | 30.0% |
ACATACATATCTGTCACATT+TGG | + | chr4_4:63946604-63946623 | Msa0694620:CDS | 30.0% | |
! | ATTTTCCTCTTCCATTTTAC+CGG | - | chr4_4:63946680-63946699 | None:intergenic | 30.0% |
!! | TAAGATTTTGAAGGATTTCG+TGG | + | chr4_4:63946742-63946761 | Msa0694620:CDS | 30.0% |
! | AGGGATTTAGTTGATTTAGT+AGG | + | chr4_4:63946982-63947001 | Msa0694620:intron | 30.0% |
AAACATTATCTACAGAAGAG+AGG | + | chr4_4:63947061-63947080 | Msa0694620:CDS | 30.0% | |
AACATTATCTACAGAAGAGA+GGG | + | chr4_4:63947062-63947081 | Msa0694620:CDS | 30.0% | |
! | ATTCCATTTGTTGAACTCTA+AGG | + | chr4_4:63947098-63947117 | Msa0694620:CDS | 30.0% |
! | CGAATGAATGTTCTTTTTGT+AGG | + | chr4_4:63947241-63947260 | Msa0694620:intron | 30.0% |
!! | TAATTACTTTTCTGGGGAAA+TGG | + | chr4_4:63947443-63947462 | Msa0694620:intron | 30.0% |
GGAAATGGATCTTAACAATA+TGG | + | chr4_4:63947458-63947477 | Msa0694620:intron | 30.0% | |
AATGACATGGCATAAATATG+AGG | - | chr4_4:63947694-63947713 | None:intergenic | 30.0% | |
!!! | TATTGACTCTTTTGTAGAAG+GGG | - | chr4_4:63947917-63947936 | None:intergenic | 30.0% |
!!! | GTATTGACTCTTTTGTAGAA+GGG | - | chr4_4:63947918-63947937 | None:intergenic | 30.0% |
!!! | AGTATTGACTCTTTTGTAGA+AGG | - | chr4_4:63947919-63947938 | None:intergenic | 30.0% |
! | GTACTGTAAACTTTTGTGAA+TGG | - | chr4_4:63947942-63947961 | None:intergenic | 30.0% |
TAGGGAAGTTATTAGCTAAT+GGG | - | chr4_4:63948024-63948043 | None:intergenic | 30.0% | |
TTAGGGAAGTTATTAGCTAA+TGG | - | chr4_4:63948025-63948044 | None:intergenic | 30.0% | |
! | AAAGCTATTTGCTAAACAGA+AGG | - | chr4_4:63948325-63948344 | None:intergenic | 30.0% |
CGAAAAGGAAGAAAAAGAAT+TGG | + | chr4_4:63948347-63948366 | Msa0694620:intron | 30.0% | |
AAAAGAATTGGAAACGAACA+AGG | + | chr4_4:63948359-63948378 | Msa0694620:intron | 30.0% | |
AAAGAATTGGAAACGAACAA+GGG | + | chr4_4:63948360-63948379 | Msa0694620:intron | 30.0% | |
GCATACAATGCCAAAAATAA+AGG | + | chr4_4:63948417-63948436 | Msa0694620:intron | 30.0% | |
!!! | ACTTTCTGCACCTTTATTTT+TGG | - | chr4_4:63948430-63948449 | None:intergenic | 30.0% |
! | CAATTGTTACTTGTTAGAGT+CGG | - | chr4_4:63948734-63948753 | None:intergenic | 30.0% |
AGATAGTTATACATACTTCG+AGG | + | chr4_4:63948767-63948786 | Msa0694620:intron | 30.0% | |
GCATTAATTCAGTTAAGAGT+GGG | - | chr4_4:63948853-63948872 | None:intergenic | 30.0% | |
TGCATTAATTCAGTTAAGAG+TGG | - | chr4_4:63948854-63948873 | None:intergenic | 30.0% | |
! | CAAAACAAAATTGGGTTGTA+TGG | - | chr4_4:63948906-63948925 | None:intergenic | 30.0% |
!! | CATACAACCCAATTTTGTTT+TGG | + | chr4_4:63948904-63948923 | Msa0694620:intron | 30.0% |
TGTTAGGATATAGGATAAGA+AGG | - | chr4_4:63949004-63949023 | None:intergenic | 30.0% | |
ATTAGCAGATGTTAGGATAT+AGG | - | chr4_4:63949013-63949032 | None:intergenic | 30.0% | |
AAATCTTAAAGTTTCGGAAC+TGG | - | chr4_4:63949109-63949128 | None:intergenic | 30.0% | |
CTCATAAAAGTTTAAGCTGT+TGG | + | chr4_4:63949189-63949208 | Msa0694620:intron | 30.0% | |
TGAATTATAAAACTCAGTGG+TGG | - | chr4_4:63949307-63949326 | None:intergenic | 30.0% | |
TAATTCATTCGAGTGTTACA+TGG | + | chr4_4:63949320-63949339 | Msa0694620:intron | 30.0% | |
!!! | TTAGAGTTTTGTTGTGTTCA+TGG | + | chr4_4:63949483-63949502 | Msa0694620:intron | 30.0% |
CTTTAATGAATGAATGGTGA+TGG | + | chr4_4:63949615-63949634 | Msa0694620:intron | 30.0% | |
! | GCATAAGCTTTTCGTATAAT+TGG | - | chr4_4:63949681-63949700 | None:intergenic | 30.0% |
TACGAAAAGCTTATGCTATT+TGG | + | chr4_4:63949685-63949704 | Msa0694620:intron | 30.0% | |
!! | AGCTTATGCTATTTGGATTT+TGG | + | chr4_4:63949692-63949711 | Msa0694620:intron | 30.0% |
! | TTTTACTATCGTTGTCGTTA+AGG | - | chr4_4:63949965-63949984 | None:intergenic | 30.0% |
AACGATAGTAAAAAGTGGAT+GGG | + | chr4_4:63949972-63949991 | Msa0694620:CDS | 30.0% | |
GAGAACAAAATTGTCAAAAG+TGG | + | chr4_4:63950305-63950324 | Msa0694620:CDS | 30.0% | |
CAAACGATAATTTCTTGTCT+GGG | - | chr4_4:63950529-63950548 | None:intergenic | 30.0% | |
TCAAACGATAATTTCTTGTC+TGG | - | chr4_4:63950530-63950549 | None:intergenic | 30.0% | |
AGACAAGAAATTATCGTTTG+AGG | + | chr4_4:63950529-63950548 | Msa0694620:CDS | 30.0% | |
GACAAGAAATTATCGTTTGA+GGG | + | chr4_4:63950530-63950549 | Msa0694620:CDS | 30.0% | |
!! | TATTTCAGAGTTTTTCAACC+CGG | + | chr4_4:63950679-63950698 | Msa0694620:CDS | 30.0% |
!! | GAACTTGGTTTGTAAAAAGA+AGG | + | chr4_4:63951051-63951070 | Msa0694620:CDS | 30.0% |
ACAAACAGTTTGATATGAAC+TGG | + | chr4_4:63951137-63951156 | Msa0694620:intron | 30.0% | |
AAAATACAACTCAGTTATCC+TGG | - | chr4_4:63951189-63951208 | None:intergenic | 30.0% | |
AGTTTAAACTCAAAAAAGGG+GGG | - | chr4_4:63951231-63951250 | None:intergenic | 30.0% | |
CAGTTTAAACTCAAAAAAGG+GGG | - | chr4_4:63951232-63951251 | None:intergenic | 30.0% | |
GCAGTTTAAACTCAAAAAAG+GGG | - | chr4_4:63951233-63951252 | None:intergenic | 30.0% | |
GAGCAGTTTAAACTCAAAAA+AGG | - | chr4_4:63951235-63951254 | None:intergenic | 30.0% | |
AACCTATTTATTACGTACGA+CGG | - | chr4_4:63951257-63951276 | None:intergenic | 30.0% | |
TCAAAGTACAGAGATAAAGA+TGG | - | chr4_4:63951301-63951320 | None:intergenic | 30.0% | |
GTGACTACCATAATTTCTTT+GGG | + | chr4_4:63951332-63951351 | Msa0694620:intron | 30.0% | |
! | TTCGAGGAAAATATCCTTTT+AGG | - | chr4_4:63951595-63951614 | None:intergenic | 30.0% |
CCCTATTTATTATTGCAACA+AGG | - | chr4_4:63951683-63951702 | None:intergenic | 30.0% | |
! | CTTTTAAACTTGTGCCTTAA+GGG | - | chr4_4:63951717-63951736 | None:intergenic | 30.0% |
AAATTATGCTGTCTTACTTC+AGG | + | chr4_4:63951938-63951957 | Msa0694620:intron | 30.0% | |
!! | TTTCTGAAGAACTACTCTTT+TGG | + | chr4_4:63952146-63952165 | Msa0694620:intron | 30.0% |
!! | TTCTGAAGAACTACTCTTTT+GGG | + | chr4_4:63952147-63952166 | Msa0694620:intron | 30.0% |
AAACAATGACCTAGAAGTTT+AGG | - | chr4_4:63952525-63952544 | None:intergenic | 30.0% | |
AAACTTCTAGGTCATTGTTT+CGG | + | chr4_4:63952525-63952544 | Msa0694620:intron | 30.0% | |
AATACATCGTTGTAATCACA+TGG | - | chr4_4:63952578-63952597 | None:intergenic | 30.0% | |
GTCAACTGTGTCATATAATA+TGG | + | chr4_4:63952869-63952888 | Msa0694620:intron | 30.0% | |
! | ACGTAATCCTAATTTGTAGA+AGG | + | chr4_4:63953163-63953182 | Msa0694620:intron | 30.0% |
TAGAAAGCCTTCTACAAATT+AGG | - | chr4_4:63953173-63953192 | None:intergenic | 30.0% | |
GTAAGAATGGAATTTGTAGT+TGG | - | chr4_4:63953635-63953654 | None:intergenic | 30.0% | |
TAACTGATGATTGAGAAACT+TGG | + | chr4_4:63953750-63953769 | Msa0694620:intron | 30.0% | |
TATTAGCTGGTTATTGTTTC+TGG | + | chr4_4:63953819-63953838 | Msa0694620:intron | 30.0% | |
! | ATGTTGTATGGTTTTCATCA+TGG | - | chr4_4:63953907-63953926 | None:intergenic | 30.0% |
GTGGATGTATTAATGTTGTA+TGG | - | chr4_4:63953919-63953938 | None:intergenic | 30.0% | |
!!! | GGGGTCATTTTTTTTCATAA+AGG | - | chr4_4:63953955-63953974 | None:intergenic | 30.0% |
! | AAGAAAATGATCCAAGCTTT+TGG | - | chr4_4:63954030-63954049 | None:intergenic | 30.0% |
! | TGCTGTGTTGTCTATTATTT+TGG | + | chr4_4:63954058-63954077 | Msa0694620:intron | 30.0% |
TTTAAATTCCATTCGTGTTG+CGG | - | chr4_4:63954505-63954524 | None:intergenic | 30.0% | |
ACATCTAATCATTCCAAAAG+GGG | - | chr4_4:63954583-63954602 | None:intergenic | 30.0% | |
GTTCAGCTTCTTCAAATATT+TGG | - | chr4_4:63954611-63954630 | None:intergenic | 30.0% | |
! | AAAGCATTAGACAAATATGG+GGG | - | chr4_4:63954688-63954707 | None:intergenic | 30.0% |
! | CAAAGCATTAGACAAATATG+GGG | - | chr4_4:63954689-63954708 | None:intergenic | 30.0% |
! | CCAAAGCATTAGACAAATAT+GGG | - | chr4_4:63954690-63954709 | None:intergenic | 30.0% |
! | ACCAAAGCATTAGACAAATA+TGG | - | chr4_4:63954691-63954710 | None:intergenic | 30.0% |
! | AGTTTTACTTGGAATTACAC+AGG | + | chr4_4:63954900-63954919 | Msa0694620:intron | 30.0% |
! | GGAATTACACAGGATATTTT+TGG | + | chr4_4:63954910-63954929 | Msa0694620:intron | 30.0% |
TGTCAACCAAATTCAAAAGA+GGG | - | chr4_4:63955044-63955063 | None:intergenic | 30.0% | |
TTGTCAACCAAATTCAAAAG+AGG | - | chr4_4:63955045-63955064 | None:intergenic | 30.0% | |
TTAAGAAAAGAGGTTGGATA+AGG | + | chr4_4:63955076-63955095 | Msa0694620:CDS | 30.0% | |
ATAAGGTATACTACTCTATC+TGG | + | chr4_4:63955093-63955112 | Msa0694620:intron | 30.0% | |
TTAGTAACTGCTAGAAACAA+TGG | + | chr4_4:63955135-63955154 | Msa0694620:intron | 30.0% | |
CAAGTTGTCGTAATGTATTA+TGG | + | chr4_4:63955247-63955266 | Msa0694620:intron | 30.0% | |
ATACACTTACACACTAAATG+GGG | - | chr4_4:63955454-63955473 | None:intergenic | 30.0% | |
CATACACTTACACACTAAAT+GGG | - | chr4_4:63955455-63955474 | None:intergenic | 30.0% | |
TCATACACTTACACACTAAA+TGG | - | chr4_4:63955456-63955475 | None:intergenic | 30.0% | |
ATTTAGTGTGTAAGTGTATG+AGG | + | chr4_4:63955455-63955474 | Msa0694620:intron | 30.0% | |
TGAAATTCATCTCTATTCCT+TGG | - | chr4_4:63955540-63955559 | None:intergenic | 30.0% | |
AGAATGTTGAAAACTGCTTA+TGG | - | chr4_4:63955593-63955612 | None:intergenic | 30.0% | |
! | GGGTTTTACTACACAAAATA+AGG | + | chr4_4:63955647-63955666 | Msa0694620:intron | 30.0% |
! | TGTTGATCTGTTTAATTTCC+TGG | + | chr4_4:63955680-63955699 | Msa0694620:intron | 30.0% |
ATCATAGTTTCTGTTAATGC+AGG | + | chr4_4:63955798-63955817 | Msa0694620:intron | 30.0% | |
AAAGCTTCATTAATCTGAGT+TGG | - | chr4_4:63956000-63956019 | None:intergenic | 30.0% | |
GCAAATTAACAGAGTAAACT+AGG | + | chr4_4:63956024-63956043 | Msa0694620:intron | 30.0% | |
!!! | TTATTTTTTGGGTATCGGTT+AGG | - | chr4_4:63956178-63956197 | None:intergenic | 30.0% |
!!! | ATGGCTTATTTTTTGGGTAT+CGG | - | chr4_4:63956183-63956202 | None:intergenic | 30.0% |
! | TTTTAATGAGTACTTGGAGT+TGG | - | chr4_4:63956364-63956383 | None:intergenic | 30.0% |
!!! | TTTGGCTTTTAATGAGTACT+TGG | - | chr4_4:63956370-63956389 | None:intergenic | 30.0% |
AGTACTCATTAAAAGCCAAA+AGG | + | chr4_4:63956370-63956389 | Msa0694620:intron | 30.0% | |
!!! | TCTTTTTTGCTTCTTGAACT+TGG | + | chr4_4:63956520-63956539 | Msa0694620:intron | 30.0% |
AACTTGGATGAAATCATCAA+CGG | + | chr4_4:63956536-63956555 | Msa0694620:intron | 30.0% | |
!!! | GGTAAGTTTTTTACAAGAGT+AGG | + | chr4_4:63956657-63956676 | Msa0694620:CDS | 30.0% |
ATGATAAATAATCGGTGAGA+AGG | - | chr4_4:63957016-63957035 | None:intergenic | 30.0% | |
! | TTCTCACCGATTATTTATCA+TGG | + | chr4_4:63957015-63957034 | Msa0694620:intron | 30.0% |
GTAATATGATAAGTTGTGGA+TGG | + | chr4_4:63957111-63957130 | Msa0694620:intron | 30.0% | |
CAAATACATGAGAATATGTG+AGG | - | chr4_4:63957293-63957312 | None:intergenic | 30.0% | |
AGTGCAATCGATGAATTATA+GGG | + | chr4_4:63957425-63957444 | Msa0694620:intron | 30.0% | |
GCCAGCATAAAAAATATGAA+AGG | + | chr4_4:63957458-63957477 | Msa0694620:intron | 30.0% | |
! | TTGTCTACATTTTCATCAGA+TGG | + | chr4_4:63957682-63957701 | Msa0694620:intron | 30.0% |
CCAAATTTCATGTACAACAT+AGG | - | chr4_4:63958058-63958077 | None:intergenic | 30.0% | |
CCTATGTTGTACATGAAATT+TGG | + | chr4_4:63958055-63958074 | Msa0694620:three_prime_UTR | 30.0% | |
TGTACATGAAATTTGGAAGA+CGG | + | chr4_4:63958062-63958081 | Msa0694620:three_prime_UTR | 30.0% | |
TGACAGATGATTTAGGAAAT+TGG | + | chr4_4:63958124-63958143 | Msa0694620:three_prime_UTR | 30.0% | |
TGATTTAGGAAATTGGCAAT+TGG | + | chr4_4:63958131-63958150 | Msa0694620:three_prime_UTR | 30.0% | |
!! | TGTGTTACTATGTTTTGTCA+AGG | + | chr4_4:63958222-63958241 | Msa0694620:three_prime_UTR | 30.0% |
TACAAAATCCCCATGAAAAT+GGG | - | chr4_4:63958255-63958274 | None:intergenic | 30.0% | |
ATACAAAATCCCCATGAAAA+TGG | - | chr4_4:63958256-63958275 | None:intergenic | 30.0% | |
!! | CTAAGTTGAATTCGATTTGG+AGG | - | chr4_4:63945980-63945999 | None:intergenic | 35.0% |
CTCCAAATCGAATTCAACTT+AGG | + | chr4_4:63945978-63945997 | Msa0694620:five_prime_UTR | 35.0% | |
! | GACCTAAGTTGAATTCGATT+TGG | - | chr4_4:63945983-63946002 | None:intergenic | 35.0% |
GTGGTTGCACTTTATAAAAC+AGG | + | chr4_4:63946019-63946038 | Msa0694620:five_prime_UTR | 35.0% | |
! | TATTGTGGGTTATGAGTTGT+TGG | - | chr4_4:63946046-63946065 | None:intergenic | 35.0% |
ACTGGTGAGGAAATAAGAAA+CGG | - | chr4_4:63946348-63946367 | None:intergenic | 35.0% | |
AAAAGTGAAACTTACTGGTG+AGG | - | chr4_4:63946361-63946380 | None:intergenic | 35.0% | |
CAGATACAAGTAAATCGATG+TGG | + | chr4_4:63946489-63946508 | Msa0694620:intron | 35.0% | |
TAATGTCGAATTTCGTTGGA+AGG | + | chr4_4:63946565-63946584 | Msa0694620:CDS | 35.0% | |
GACAGATATGTATGTGATCT+AGG | - | chr4_4:63946599-63946618 | None:intergenic | 35.0% | |
! | TTTTCCTCTTCCATTTTACC+GGG | - | chr4_4:63946679-63946698 | None:intergenic | 35.0% |
! | GAAAATTGATTCTCCTGTTG+TGG | + | chr4_4:63946694-63946713 | Msa0694620:CDS | 35.0% |
ACTCAGAAATTACTCCAGAT+AGG | + | chr4_4:63946777-63946796 | Msa0694620:CDS | 35.0% | |
CTCAGAAATTACTCCAGATA+GGG | + | chr4_4:63946778-63946797 | Msa0694620:CDS | 35.0% | |
ATTATAGCGTGTATCTGATC+AGG | - | chr4_4:63946809-63946828 | None:intergenic | 35.0% | |
TCAGATACACGCTATAATCA+TGG | + | chr4_4:63946811-63946830 | Msa0694620:CDS | 35.0% | |
!!! | TTGCTTTTTCGACCCTATAA+TGG | + | chr4_4:63946900-63946919 | Msa0694620:intron | 35.0% |
TATCTTTGGCAGCCATTATA+GGG | - | chr4_4:63946915-63946934 | None:intergenic | 35.0% | |
TTATCTTTGGCAGCCATTAT+AGG | - | chr4_4:63946916-63946935 | None:intergenic | 35.0% | |
TGATTTAGTAGGTGATCACT+TGG | + | chr4_4:63946993-63947012 | Msa0694620:CDS | 35.0% | |
! | TCTTTTTGTAGGTTCTTCAG+CGG | + | chr4_4:63947252-63947271 | Msa0694620:intron | 35.0% |
AATATTCAACGACATACCCT+GGG | - | chr4_4:63947400-63947419 | None:intergenic | 35.0% | |
AAATATTCAACGACATACCC+TGG | - | chr4_4:63947401-63947420 | None:intergenic | 35.0% | |
TCTTAACAATATGGGCTCTA+CGG | + | chr4_4:63947467-63947486 | Msa0694620:intron | 35.0% | |
! | AAACATATTTAGGGCCCATT+TGG | + | chr4_4:63947574-63947593 | Msa0694620:intron | 35.0% |
TTCTGCCTACTTAACCAAAT+GGG | - | chr4_4:63947591-63947610 | None:intergenic | 35.0% | |
ATTCTGCCTACTTAACCAAA+TGG | - | chr4_4:63947592-63947611 | None:intergenic | 35.0% | |
!!! | GGCTGTTTTTTTTGAAGTTG+TGG | + | chr4_4:63947748-63947767 | Msa0694620:intron | 35.0% |
AAATACGGAGGTTATTGAGT+TGG | - | chr4_4:63947980-63947999 | None:intergenic | 35.0% | |
AGGGAAGTTATTAGCTAATG+GGG | - | chr4_4:63948023-63948042 | None:intergenic | 35.0% | |
!! | AGCAAATAGCTTTGTCGAAA+AGG | + | chr4_4:63948332-63948351 | Msa0694620:intron | 35.0% |
!! | CAGTAGACTTTGAGATAAGA+AGG | + | chr4_4:63948492-63948511 | Msa0694620:intron | 35.0% |
TTGTGAGTAGTAGTAGTAGT+AGG | + | chr4_4:63948603-63948622 | Msa0694620:intron | 35.0% | |
AGTAGTAGTAGTAGTAGGAT+GGG | + | chr4_4:63948608-63948627 | Msa0694620:intron | 35.0% | |
CGACTCTAACAAGTAACAAT+TGG | + | chr4_4:63948732-63948751 | Msa0694620:intron | 35.0% | |
GTTATACATACTTCGAGGTT+CGG | + | chr4_4:63948772-63948791 | Msa0694620:intron | 35.0% | |
! | AACAAAATTGGGTTGTATGG+CGG | - | chr4_4:63948903-63948922 | None:intergenic | 35.0% |
TCGTTGTGATTTCGAAACAA+TGG | + | chr4_4:63949038-63949057 | Msa0694620:intron | 35.0% | |
! | TGGTTTTTGATGAAACAGGA+GGG | - | chr4_4:63949089-63949108 | None:intergenic | 35.0% |
!!! | GAACTGGTTTTTGATGAAAC+AGG | - | chr4_4:63949093-63949112 | None:intergenic | 35.0% |
ACTGAGAACATCATTAACCA+AGG | + | chr4_4:63949164-63949183 | Msa0694620:intron | 35.0% | |
TTACTTTATGGCCCTATGAT+TGG | + | chr4_4:63949347-63949366 | Msa0694620:intron | 35.0% | |
TTACTTTATGGCCCCATAAT+TGG | + | chr4_4:63949374-63949393 | Msa0694620:intron | 35.0% | |
TTTGACCTAGCTACTGTTTA+CGG | - | chr4_4:63949420-63949439 | None:intergenic | 35.0% | |
GTCAGGAATCATAATTCAGA+GGG | - | chr4_4:63949510-63949529 | None:intergenic | 35.0% | |
!! | TTGCAGTGTTGATAATGCAT+AGG | + | chr4_4:63949564-63949583 | Msa0694620:intron | 35.0% |
AAGAGTTGAATTTCAGCACA+TGG | - | chr4_4:63949598-63949617 | None:intergenic | 35.0% | |
! | AGGATCAATCTCTAGAAACT+TGG | + | chr4_4:63949640-63949659 | Msa0694620:intron | 35.0% |
ACGACAACGATAGTAAAAAG+TGG | + | chr4_4:63949967-63949986 | Msa0694620:CDS | 35.0% | |
CAACGATAGTAAAAAGTGGA+TGG | + | chr4_4:63949971-63949990 | Msa0694620:CDS | 35.0% | |
AATGTAGCAAGTCATCATCA+TGG | + | chr4_4:63950011-63950030 | Msa0694620:CDS | 35.0% | |
ATCTCAGTTCCTTGGTATAA+AGG | - | chr4_4:63950095-63950114 | None:intergenic | 35.0% | |
AATTGTCAAAAGTGGATCTC+AGG | + | chr4_4:63950313-63950332 | Msa0694620:CDS | 35.0% | |
GCTGAATAGAAAAATGAACC+AGG | + | chr4_4:63950373-63950392 | Msa0694620:CDS | 35.0% | |
GAAACGTTAGTGAGTAAACA+TGG | + | chr4_4:63950395-63950414 | Msa0694620:CDS | 35.0% | |
!! | CTCAGAGTTGATAAAGTGAA+GGG | + | chr4_4:63950557-63950576 | Msa0694620:CDS | 35.0% |
! | TGATAAAGTGAAGGGTACAA+AGG | + | chr4_4:63950565-63950584 | Msa0694620:CDS | 35.0% |
! | TTTTATACCCTTCAGAAGCA+TGG | - | chr4_4:63950592-63950611 | None:intergenic | 35.0% |
GTTCTTCTGACATGATAGTT+AGG | + | chr4_4:63950735-63950754 | Msa0694620:CDS | 35.0% | |
TGACATGATAGTTAGGAAAG+AGG | + | chr4_4:63950742-63950761 | Msa0694620:CDS | 35.0% | |
GACATGATAGTTAGGAAAGA+GGG | + | chr4_4:63950743-63950762 | Msa0694620:CDS | 35.0% | |
ACATGATAGTTAGGAAAGAG+GGG | + | chr4_4:63950744-63950763 | Msa0694620:CDS | 35.0% | |
TTAAGCCAAAATTGCATACC+CGG | - | chr4_4:63950793-63950812 | None:intergenic | 35.0% | |
AAGGCTGTAAATAGAATACC+AGG | + | chr4_4:63951168-63951187 | Msa0694620:intron | 35.0% | |
! | CTGTACTTTGACTTTATCGT+AGG | + | chr4_4:63951310-63951329 | Msa0694620:intron | 35.0% |
GGTGACTACCATAATTTCTT+TGG | + | chr4_4:63951331-63951350 | Msa0694620:intron | 35.0% | |
!! | TTTTGGTGGTATACAGATAC+AGG | + | chr4_4:63951509-63951528 | Msa0694620:intron | 35.0% |
! | ACAGATACAGGAATTTTGAG+CGG | + | chr4_4:63951521-63951540 | Msa0694620:intron | 35.0% |
GGCAAATGCAATGTGTAATT+TGG | - | chr4_4:63951571-63951590 | None:intergenic | 35.0% | |
! | GAGGAAAATATCCTTTTAGG+AGG | - | chr4_4:63951592-63951611 | None:intergenic | 35.0% |
TCAGCTTGATAAATATCTCC+AGG | + | chr4_4:63951648-63951667 | Msa0694620:intron | 35.0% | |
GCAACAAGGAATAAAATACC+TGG | - | chr4_4:63951669-63951688 | None:intergenic | 35.0% | |
! | GCTTTTAAACTTGTGCCTTA+AGG | - | chr4_4:63951718-63951737 | None:intergenic | 35.0% |
!! | TTCCTTAACTTGCATCCTTA+GGG | + | chr4_4:63951840-63951859 | Msa0694620:intron | 35.0% |
TTGCTGAACAACATGAAGTA+TGG | + | chr4_4:63951982-63952001 | Msa0694620:CDS | 35.0% | |
TGCTGAACAACATGAAGTAT+GGG | + | chr4_4:63951983-63952002 | Msa0694620:CDS | 35.0% | |
!!! | CTTTTTTAGCGTTTCCTCAA+AGG | + | chr4_4:63952007-63952026 | Msa0694620:CDS | 35.0% |
!!! | TGTTAGACTGTCGTTTTTCA+CGG | - | chr4_4:63952108-63952127 | None:intergenic | 35.0% |
AAACTCAAGATTGACAAGAG+AGG | - | chr4_4:63952294-63952313 | None:intergenic | 35.0% | |
!! | CATTTTAGTATGCCTTCTCT+CGG | + | chr4_4:63952473-63952492 | Msa0694620:intron | 35.0% |
CCTAGAAGTTTAGGTCTAAT+GGG | - | chr4_4:63952516-63952535 | None:intergenic | 35.0% | |
ACCTAGAAGTTTAGGTCTAA+TGG | - | chr4_4:63952517-63952536 | None:intergenic | 35.0% | |
AACTTCTAGGTCATTGTTTC+GGG | + | chr4_4:63952526-63952545 | Msa0694620:intron | 35.0% | |
! | TAGGTTGAGCAGGATATAAT+AGG | + | chr4_4:63952549-63952568 | Msa0694620:intron | 35.0% |
AGGTTGAGCAGGATATAATA+GGG | + | chr4_4:63952550-63952569 | Msa0694620:intron | 35.0% | |
AATACATCGTAGTAGTCACA+TGG | - | chr4_4:63952613-63952632 | None:intergenic | 35.0% | |
GTAGGTCATTTAAATTGGGA+CGG | - | chr4_4:63952650-63952669 | None:intergenic | 35.0% | |
TGTCATATAATATGGGACAG+AGG | + | chr4_4:63952877-63952896 | Msa0694620:intron | 35.0% | |
GTCATATAATATGGGACAGA+GGG | + | chr4_4:63952878-63952897 | Msa0694620:intron | 35.0% | |
CAAATTCTCTCTTCAGTGAA+TGG | + | chr4_4:63952952-63952971 | Msa0694620:intron | 35.0% | |
! | AGAAACTGTTTTGCACATAG+AGG | + | chr4_4:63952996-63953015 | Msa0694620:intron | 35.0% |
AGTAAATGTAGATGATGCTG+TGG | + | chr4_4:63953247-63953266 | Msa0694620:intron | 35.0% | |
! | TGTGTTAAGTTCTGATACTG+AGG | + | chr4_4:63953430-63953449 | Msa0694620:CDS | 35.0% |
AGTGATAGGATCAGTAATCT+AGG | + | chr4_4:63953455-63953474 | Msa0694620:CDS | 35.0% | |
TATAGTCTGTTACCAGTGAT+GGG | - | chr4_4:63953538-63953557 | None:intergenic | 35.0% | |
CAAATTATCGCGAGTAAGAA+TGG | - | chr4_4:63953648-63953667 | None:intergenic | 35.0% | |
CATTCTTACTCGCGATAATT+TGG | + | chr4_4:63953646-63953665 | Msa0694620:CDS | 35.0% | |
TAAAGGAGATAATAGAGCAG+TGG | - | chr4_4:63953938-63953957 | None:intergenic | 35.0% | |
!!! | TCTATTATTTTGGCGACCTT+TGG | + | chr4_4:63954068-63954087 | Msa0694620:intron | 35.0% |
TCTTCTCAATCACAATGATG+AGG | - | chr4_4:63954114-63954133 | None:intergenic | 35.0% | |
TATGCAAGCAAATTCTATGG+TGG | - | chr4_4:63954366-63954385 | None:intergenic | 35.0% | |
TGATATTGTAGCTCAGATTG+TGG | - | chr4_4:63954415-63954434 | None:intergenic | 35.0% | |
CAATCTGAGCTACAATATCA+AGG | + | chr4_4:63954415-63954434 | Msa0694620:intron | 35.0% | |
ATCAAATATGACCTCAATCG+TGG | - | chr4_4:63954458-63954477 | None:intergenic | 35.0% | |
TGCAATTCTTGACTGTATCA+AGG | + | chr4_4:63954478-63954497 | Msa0694620:intron | 35.0% | |
AACATGGGAATAATCCACAT+AGG | + | chr4_4:63954551-63954570 | Msa0694620:intron | 35.0% | |
AAAAGGGGATTATTCCTATG+TGG | - | chr4_4:63954568-63954587 | None:intergenic | 35.0% | |
! | ACATAGGAATAATCCCCTTT+TGG | + | chr4_4:63954567-63954586 | Msa0694620:intron | 35.0% |
CAGCTTCTTCAAATATTTGG+TGG | - | chr4_4:63954608-63954627 | None:intergenic | 35.0% | |
TATGAAAGTTAGGATGCCAA+TGG | - | chr4_4:63954636-63954655 | None:intergenic | 35.0% | |
CCCATATTTGTCTAATGCTT+TGG | + | chr4_4:63954687-63954706 | Msa0694620:intron | 35.0% | |
! | ATTATTAAACGAGAGGCACA+AGG | + | chr4_4:63954749-63954768 | Msa0694620:intron | 35.0% |
TTCAGAGAAGAGGAAAAAGA+GGG | - | chr4_4:63954838-63954857 | None:intergenic | 35.0% | |
! | TCTTTTTCCTCTTCTCTGAA+GGG | + | chr4_4:63954838-63954857 | Msa0694620:intron | 35.0% |
! | ATGATTGATAACCTGGAGAA+AGG | + | chr4_4:63954869-63954888 | Msa0694620:intron | 35.0% |
AAAAGAGGGACACTAACATT+AGG | - | chr4_4:63955030-63955049 | None:intergenic | 35.0% | |
! | TAGTGTCCCTCTTTTGAATT+TGG | + | chr4_4:63955035-63955054 | Msa0694620:CDS | 35.0% |
TTCAGCTTAAGAAAAGAGGT+TGG | + | chr4_4:63955070-63955089 | Msa0694620:CDS | 35.0% | |
CAATTTACAGAACCTTCCTT+TGG | + | chr4_4:63955194-63955213 | Msa0694620:intron | 35.0% | |
AAAAGAGTAACACCAAAGGA+AGG | - | chr4_4:63955209-63955228 | None:intergenic | 35.0% | |
TACACTTACACACTAAATGG+GGG | - | chr4_4:63955453-63955472 | None:intergenic | 35.0% | |
!!! | ATTCTGTTACTTTTAGGCCA+AGG | + | chr4_4:63955520-63955539 | Msa0694620:intron | 35.0% |
TGAAAACTGCTTATGGTCAT+TGG | - | chr4_4:63955586-63955605 | None:intergenic | 35.0% | |
!!! | ATTGTTACTTTTAGGCCAAG+TGG | + | chr4_4:63955626-63955645 | Msa0694620:intron | 35.0% |
!!! | TTGTTACTTTTAGGCCAAGT+GGG | + | chr4_4:63955627-63955646 | Msa0694620:intron | 35.0% |
TTTGTGTAGTAAAACCCACT+TGG | - | chr4_4:63955644-63955663 | None:intergenic | 35.0% | |
TAAACAGATCAACAGTGTCA+TGG | - | chr4_4:63955674-63955693 | None:intergenic | 35.0% | |
! | TCTGTTTAATTTCCTGGACT+TGG | + | chr4_4:63955686-63955705 | Msa0694620:intron | 35.0% |
TATTAGCTACTTCTAAGTCC+AGG | - | chr4_4:63955779-63955798 | None:intergenic | 35.0% | |
GTCAAAACAGATATTACAGC+TGG | + | chr4_4:63955838-63955857 | Msa0694620:CDS | 35.0% | |
ACAGAGTAAACTAGGTTACT+TGG | + | chr4_4:63956032-63956051 | Msa0694620:intron | 35.0% | |
GCACACATCCAACAAATAAA+TGG | - | chr4_4:63956081-63956100 | None:intergenic | 35.0% | |
AGCCAAAAAGTTTACTCTCT+TGG | + | chr4_4:63956281-63956300 | Msa0694620:intron | 35.0% | |
! | AGCCAAGAGAGTAAACTTTT+TGG | - | chr4_4:63956286-63956305 | None:intergenic | 35.0% |
! | GTTGGTTCATTCTCATAACT+TGG | - | chr4_4:63956346-63956365 | None:intergenic | 35.0% |
CTCTGAATGCAGTTTATTTC+TGG | + | chr4_4:63956401-63956420 | Msa0694620:intron | 35.0% | |
CTACATGTCTACTAGAAAAC+AGG | - | chr4_4:63956487-63956506 | None:intergenic | 35.0% | |
TGCATATGTTTCATGTTCTG+TGG | + | chr4_4:63956607-63956626 | Msa0694620:intron | 35.0% | |
CTTGTAAAAAACTTACCACC+AGG | - | chr4_4:63956654-63956673 | None:intergenic | 35.0% | |
GGATTACCCCAAATAACAAA+TGG | + | chr4_4:63956678-63956697 | Msa0694620:CDS | 35.0% | |
TTACCCCAAATAACAAATGG+TGG | + | chr4_4:63956681-63956700 | Msa0694620:CDS | 35.0% | |
!! | ACTGCCACCATTTGTTATTT+GGG | - | chr4_4:63956688-63956707 | None:intergenic | 35.0% |
AAGCCTTCTCAAACAATAAC+TGG | + | chr4_4:63956714-63956733 | Msa0694620:CDS | 35.0% | |
GATCCAGTTATTGTTTGAGA+AGG | - | chr4_4:63956720-63956739 | None:intergenic | 35.0% | |
TCTCAAACAATAACTGGATC+TGG | + | chr4_4:63956720-63956739 | Msa0694620:CDS | 35.0% | |
CTCAAACAATAACTGGATCT+GGG | + | chr4_4:63956721-63956740 | Msa0694620:CDS | 35.0% | |
TCAAACAATAACTGGATCTG+GGG | + | chr4_4:63956722-63956741 | Msa0694620:CDS | 35.0% | |
AACATCACAAAACACGAATC+TGG | + | chr4_4:63956750-63956769 | Msa0694620:CDS | 35.0% | |
ATTACCGACAAGCAAAACAT+GGG | - | chr4_4:63957047-63957066 | None:intergenic | 35.0% | |
AATTACCGACAAGCAAAACA+TGG | - | chr4_4:63957048-63957067 | None:intergenic | 35.0% | |
TGCAATAATTGGAACTAGGT+TGG | + | chr4_4:63957384-63957403 | Msa0694620:intron | 35.0% | |
CAGTGCAATCGATGAATTAT+AGG | + | chr4_4:63957424-63957443 | Msa0694620:intron | 35.0% | |
GTGAAGGTCTTTGAATGTTA+TGG | + | chr4_4:63957563-63957582 | Msa0694620:intron | 35.0% | |
TCCTAAGACTTTGACATATG+AGG | + | chr4_4:63957659-63957678 | Msa0694620:intron | 35.0% | |
ACCTCATATGTCAAAGTCTT+AGG | - | chr4_4:63957663-63957682 | None:intergenic | 35.0% | |
ATCAAGCTGACTAAAGTTGT+TGG | - | chr4_4:63957712-63957731 | None:intergenic | 35.0% | |
ACAACTTTAGTCAGCTTGAT+CGG | + | chr4_4:63957712-63957731 | Msa0694620:CDS | 35.0% | |
TAGAAGTTCCAGAATTGCAT+AGG | - | chr4_4:63957929-63957948 | None:intergenic | 35.0% | |
TAGATTGTAGATGCAAGAAC+AGG | + | chr4_4:63958096-63958115 | Msa0694620:three_prime_UTR | 35.0% | |
ACAAAATCCCCATGAAAATG+GGG | - | chr4_4:63958254-63958273 | None:intergenic | 35.0% | |
GTGAAATGCTTCTAGTGAAT+AGG | + | chr4_4:63958292-63958311 | Msa0694620:three_prime_UTR | 35.0% | |
GAATTCAACTTAGGTCGTGT+TGG | + | chr4_4:63945987-63946006 | Msa0694620:five_prime_UTR | 40.0% | |
CAAGACAAAAACACACACCT+TGG | + | chr4_4:63946185-63946204 | Msa0694620:five_prime_UTR | 40.0% | |
AACGATGAAGAAGAAACCCA+TGG | + | chr4_4:63946256-63946275 | Msa0694620:exon | 40.0% | |
AGATCATTCACACTCTCCAT+GGG | - | chr4_4:63946275-63946294 | None:intergenic | 40.0% | |
! | TTTCCTCTTCCATTTTACCG+GGG | - | chr4_4:63946678-63946697 | None:intergenic | 40.0% |
! | AATTGATTCTCCTGTTGTGG+AGG | + | chr4_4:63946697-63946716 | Msa0694620:CDS | 40.0% |
!! | AGGATTTCGTGGTTGATTTG+TGG | + | chr4_4:63946753-63946772 | Msa0694620:CDS | 40.0% |
TTCTTGCTGAAATATCAGCG+AGG | + | chr4_4:63946837-63946856 | Msa0694620:CDS | 40.0% | |
TCTTGCTGAAATATCAGCGA+GGG | + | chr4_4:63946838-63946857 | Msa0694620:CDS | 40.0% | |
!! | ATCTTGTCGACTTGTTGACA+AGG | + | chr4_4:63946873-63946892 | Msa0694620:CDS | 40.0% |
AGAAGAAATCAAGCGGCAAT+AGG | + | chr4_4:63947024-63947043 | Msa0694620:CDS | 40.0% | |
GCTCCTTAGAGTTCAACAAA+TGG | - | chr4_4:63947104-63947123 | None:intergenic | 40.0% | |
GATGCAGCCTGTTATGAATT+TGG | + | chr4_4:63947370-63947389 | Msa0694620:CDS | 40.0% | |
TTATGAATTTGGCAAGCCCA+GGG | + | chr4_4:63947381-63947400 | Msa0694620:CDS | 40.0% | |
GTTGTGTTTATGTAGGGACT+CGG | + | chr4_4:63947533-63947552 | Msa0694620:intron | 40.0% | |
TTGTGTTTATGTAGGGACTC+GGG | + | chr4_4:63947534-63947553 | Msa0694620:intron | 40.0% | |
GACATGGCATAAATATGAGG+TGG | - | chr4_4:63947691-63947710 | None:intergenic | 40.0% | |
GGACTTCATTGACAATGACA+TGG | - | chr4_4:63947707-63947726 | None:intergenic | 40.0% | |
GATTATGATGAGGCCATTGA+TGG | + | chr4_4:63947786-63947805 | Msa0694620:intron | 40.0% | |
GCTAGAAATCTCTTCTGCAA+GGG | + | chr4_4:63947888-63947907 | Msa0694620:intron | 40.0% | |
AACTTCCCTAACTAACTCCT+AGG | + | chr4_4:63948034-63948053 | Msa0694620:intron | 40.0% | |
ACTTCCCTAACTAACTCCTA+GGG | + | chr4_4:63948035-63948054 | Msa0694620:intron | 40.0% | |
!! | ATTTCAGGTTGTGTTGGAGA+TGG | + | chr4_4:63948143-63948162 | Msa0694620:intron | 40.0% |
!! | TTTCAGGTTGTGTTGGAGAT+GGG | + | chr4_4:63948144-63948163 | Msa0694620:intron | 40.0% |
!! | TGTGTTGGAGATGGGTTATA+CGG | + | chr4_4:63948152-63948171 | Msa0694620:intron | 40.0% |
GAAGAAACAATCTCAACGTC+AGG | + | chr4_4:63948197-63948216 | Msa0694620:intron | 40.0% | |
AAGCAACAACACATTCAAGC+CGG | + | chr4_4:63948230-63948249 | Msa0694620:intron | 40.0% | |
TGAAACTGCAGGAAGATTCT+AGG | - | chr4_4:63948277-63948296 | None:intergenic | 40.0% | |
TGCTAAACAGAAGGAGATCA+TGG | - | chr4_4:63948316-63948335 | None:intergenic | 40.0% | |
GAACAAGGGAGGATTGAAAA+AGG | + | chr4_4:63948374-63948393 | Msa0694620:intron | 40.0% | |
ACAGTAACAGATCTGCATCT+TGG | + | chr4_4:63948456-63948475 | Msa0694620:intron | 40.0% | |
GAGTAGTAGTAGTAGTAGGA+TGG | + | chr4_4:63948607-63948626 | Msa0694620:intron | 40.0% | |
!! | AAGGATGGTGGAAAGACATT+GGG | + | chr4_4:63948646-63948665 | Msa0694620:intron | 40.0% |
! | ACAAAATTGGGTTGTATGGC+GGG | - | chr4_4:63948902-63948921 | None:intergenic | 40.0% |
!!! | GTTTTGGTTTTATCGGGTTC+CGG | + | chr4_4:63948920-63948939 | Msa0694620:intron | 40.0% |
!!! | TTTTGGTTTTATCGGGTTCC+GGG | + | chr4_4:63948921-63948940 | Msa0694620:intron | 40.0% |
TAGTAGGGCTAAGCAAAAGA+TGG | - | chr4_4:63948954-63948973 | None:intergenic | 40.0% | |
TATGCGACAAGGAGTTAGTA+GGG | - | chr4_4:63948969-63948988 | None:intergenic | 40.0% | |
ATATGCGACAAGGAGTTAGT+AGG | - | chr4_4:63948970-63948989 | None:intergenic | 40.0% | |
! | GATCAGGATTAGCAGATGTT+AGG | - | chr4_4:63949020-63949039 | None:intergenic | 40.0% |
GTTTCGAAATCACAACGATC+AGG | - | chr4_4:63949036-63949055 | None:intergenic | 40.0% | |
! | AAACAGGAGGGTATGATAGT+TGG | - | chr4_4:63949077-63949096 | None:intergenic | 40.0% |
!! | CTGGTTTTTGATGAAACAGG+AGG | - | chr4_4:63949090-63949109 | None:intergenic | 40.0% |
AAAGTTTAAGCTGTTGGGTG+AGG | + | chr4_4:63949195-63949214 | Msa0694620:intron | 40.0% | |
! | TTTTGCCGTAAACAGTAGCT+AGG | + | chr4_4:63949412-63949431 | Msa0694620:intron | 40.0% |
CGTCAGGAATCATAATTCAG+AGG | - | chr4_4:63949511-63949530 | None:intergenic | 40.0% | |
CTTAAAGAGCTATTGCGTGA+GGG | - | chr4_4:63949543-63949562 | None:intergenic | 40.0% | |
GTTGAATTTCAGCACATGGT+AGG | - | chr4_4:63949594-63949613 | None:intergenic | 40.0% | |
!! | ATGAATGAATGGTGATGGCA+AGG | + | chr4_4:63949620-63949639 | Msa0694620:intron | 40.0% |
GATAGTAAAAAGTGGATGGG+TGG | + | chr4_4:63949975-63949994 | Msa0694620:CDS | 40.0% | |
GGTAACTCTGTTGCTAATAG+CGG | + | chr4_4:63950032-63950051 | Msa0694620:CDS | 40.0% | |
TAAAGGTGGATGCTTACTAG+AGG | - | chr4_4:63950078-63950097 | None:intergenic | 40.0% | |
AAGCATCCACCTTTATACCA+AGG | + | chr4_4:63950083-63950102 | Msa0694620:CDS | 40.0% | |
TCAGTTCCTTGGTATAAAGG+TGG | - | chr4_4:63950092-63950111 | None:intergenic | 40.0% | |
! | TGGGCTGTGAAGATTTTTGA+TGG | - | chr4_4:63950172-63950191 | None:intergenic | 40.0% |
CACATGTTCTCAAGATTCTC+GGG | - | chr4_4:63950257-63950276 | None:intergenic | 40.0% | |
CCACATGTTCTCAAGATTCT+CGG | - | chr4_4:63950258-63950277 | None:intergenic | 40.0% | |
CGAGAATCTTGAGAACATGT+GGG | + | chr4_4:63950256-63950275 | Msa0694620:CDS | 40.0% | |
GTTTACTCACTAACGTTTCC+TGG | - | chr4_4:63950394-63950413 | None:intergenic | 40.0% | |
!! | GCTCAGAGTTGATAAAGTGA+AGG | + | chr4_4:63950556-63950575 | Msa0694620:CDS | 40.0% |
TGGAGCTACCTTCTTGATTA+GGG | - | chr4_4:63950658-63950677 | None:intergenic | 40.0% | |
ATGGAGCTACCTTCTTGATT+AGG | - | chr4_4:63950659-63950678 | None:intergenic | 40.0% | |
! | TTTTCAACCCGGAATTTGAG+AGG | + | chr4_4:63950690-63950709 | Msa0694620:CDS | 40.0% |
TACTAAAACGTTGCAGGTTG+TGG | + | chr4_4:63950956-63950975 | Msa0694620:intron | 40.0% | |
ACTAAAACGTTGCAGGTTGT+GGG | + | chr4_4:63950957-63950976 | Msa0694620:intron | 40.0% | |
TGAGTAGACAGCAAAAGATG+TGG | - | chr4_4:63951006-63951025 | None:intergenic | 40.0% | |
TACTCAATTGCAGTGACTGA+TGG | + | chr4_4:63951020-63951039 | Msa0694620:CDS | 40.0% | |
! | CTGATGGACAGAATAGAACT+TGG | + | chr4_4:63951036-63951055 | Msa0694620:CDS | 40.0% |
CTCCGTCGTACGTAATAAAT+AGG | + | chr4_4:63951252-63951271 | Msa0694620:intron | 40.0% | |
CATTGCATTTGCCTCCTAAA+AGG | + | chr4_4:63951578-63951597 | Msa0694620:CDS | 40.0% | |
AACGCAACGTTGATGTACAA+AGG | - | chr4_4:63951629-63951648 | None:intergenic | 40.0% | |
!! | GTTCCTTAACTTGCATCCTT+AGG | + | chr4_4:63951839-63951858 | Msa0694620:intron | 40.0% |
! | TCATACTAACTTGTGCCCTA+AGG | - | chr4_4:63951858-63951877 | None:intergenic | 40.0% |
CAGCAACATTAGCTATTGAC+AGG | - | chr4_4:63951968-63951987 | None:intergenic | 40.0% | |
TTCTTCAGTGATGAAGACCT+TGG | + | chr4_4:63952175-63952194 | Msa0694620:CDS | 40.0% | |
TAATAAGAGGATACCTGCCA+AGG | - | chr4_4:63952195-63952214 | None:intergenic | 40.0% | |
TACATAGAATAGCTACAGCC+TGG | - | chr4_4:63952265-63952284 | None:intergenic | 40.0% | |
GGCTGTAGCTATTCTATGTA+TGG | + | chr4_4:63952265-63952284 | Msa0694620:intron | 40.0% | |
! | GAAGGCATACTAAAATGGCA+TGG | - | chr4_4:63952470-63952489 | None:intergenic | 40.0% |
! | CGAGAGAAGGCATACTAAAA+TGG | - | chr4_4:63952475-63952494 | None:intergenic | 40.0% |
ATCCTCAATAAACCGAGAGA+AGG | - | chr4_4:63952488-63952507 | None:intergenic | 40.0% | |
CCCATTAGACCTAAACTTCT+AGG | + | chr4_4:63952513-63952532 | Msa0694620:intron | 40.0% | |
GGTTGAGCAGGATATAATAG+GGG | + | chr4_4:63952551-63952570 | Msa0694620:intron | 40.0% | |
GTTGAGCAGGATATAATAGG+GGG | + | chr4_4:63952552-63952571 | Msa0694620:intron | 40.0% | |
GTCATTTAAATTGGGACGGA+GGG | - | chr4_4:63952646-63952665 | None:intergenic | 40.0% | |
TGATATTGTACGCCAGTTCA+AGG | + | chr4_4:63953271-63953290 | Msa0694620:CDS | 40.0% | |
GATATTGTACGCCAGTTCAA+GGG | + | chr4_4:63953272-63953291 | Msa0694620:CDS | 40.0% | |
ATATTGTACGCCAGTTCAAG+GGG | + | chr4_4:63953273-63953292 | Msa0694620:CDS | 40.0% | |
! | GATGGTTTAAGGCGAAAAGT+TGG | + | chr4_4:63953302-63953321 | Msa0694620:CDS | 40.0% |
GGCAAGTACAATGATGTAGA+AGG | - | chr4_4:63953356-63953375 | None:intergenic | 40.0% | |
CTACATCATTGTACTTGCCT+TGG | + | chr4_4:63953357-63953376 | Msa0694620:CDS | 40.0% | |
TCCAATTCATCTGCATTCCA+AGG | - | chr4_4:63953377-63953396 | None:intergenic | 40.0% | |
TTTGAAAGGTTACCCATCAC+TGG | + | chr4_4:63953523-63953542 | Msa0694620:CDS | 40.0% | |
GTATAGTCTGTTACCAGTGA+TGG | - | chr4_4:63953539-63953558 | None:intergenic | 40.0% | |
TCTATCAATAGCCAAGTTGC+TGG | - | chr4_4:63953570-63953589 | None:intergenic | 40.0% | |
TCTTACTCGCGATAATTTGG+AGG | + | chr4_4:63953649-63953668 | Msa0694620:CDS | 40.0% | |
GATAATTTGGAGGATCCTGT+TGG | + | chr4_4:63953659-63953678 | Msa0694620:CDS | 40.0% | |
CTTAAATGTGAAGTGCGACT+TGG | - | chr4_4:63953726-63953745 | None:intergenic | 40.0% | |
GAAGCAAAACCGTTAAGTAC+GGG | - | chr4_4:63953785-63953804 | None:intergenic | 40.0% | |
CGAAGCAAAACCGTTAAGTA+CGG | - | chr4_4:63953786-63953805 | None:intergenic | 40.0% | |
! | GTATGGTTTTCATCATGGCT+CGG | - | chr4_4:63953902-63953921 | None:intergenic | 40.0% |
! | GCTTGGATCATTTTCTTGCA+TGG | + | chr4_4:63954033-63954052 | Msa0694620:intron | 40.0% |
TCTCAACTGTGAAAACGTGA+AGG | + | chr4_4:63954247-63954266 | Msa0694620:intron | 40.0% | |
!!! | AGATTTTCAAGTACCGGTTG+TGG | + | chr4_4:63954322-63954341 | Msa0694620:intron | 40.0% |
TTTGATAGGTGATCCACAAC+CGG | - | chr4_4:63954338-63954357 | None:intergenic | 40.0% | |
TTGTGGATCACCTATCAAAG+TGG | + | chr4_4:63954339-63954358 | Msa0694620:intron | 40.0% | |
TGAAGAAGCTGAACTACCAT+TGG | + | chr4_4:63954617-63954636 | Msa0694620:intron | 40.0% | |
CATGTCTCCAAAACACTTTC+GGG | - | chr4_4:63954791-63954810 | None:intergenic | 40.0% | |
GCATGTCTCCAAAACACTTT+CGG | - | chr4_4:63954792-63954811 | None:intergenic | 40.0% | |
!!! | TGTTTTGGAGACATGCTTAG+TGG | + | chr4_4:63954796-63954815 | Msa0694620:intron | 40.0% |
TCAGAGAAGAGGAAAAAGAG+GGG | - | chr4_4:63954837-63954856 | None:intergenic | 40.0% | |
CTTCAGAGAAGAGGAAAAAG+AGG | - | chr4_4:63954839-63954858 | None:intergenic | 40.0% | |
! | CTCTTTTTCCTCTTCTCTGA+AGG | + | chr4_4:63954837-63954856 | Msa0694620:intron | 40.0% |
ATTCTTTCCCTTCAGAGAAG+AGG | - | chr4_4:63954848-63954867 | None:intergenic | 40.0% | |
! | ATTGATAACCTGGAGAAAGG+AGG | + | chr4_4:63954872-63954891 | Msa0694620:intron | 40.0% |
! | AGGAGGAATGGAGTTTTACT+TGG | + | chr4_4:63954889-63954908 | Msa0694620:intron | 40.0% |
GTTAGGTGCAATGCAAGTTT+AGG | - | chr4_4:63955305-63955324 | None:intergenic | 40.0% | |
TAGTGTGTAAGTGTATGAGG+TGG | + | chr4_4:63955458-63955477 | Msa0694620:intron | 40.0% | |
AGTGTGTAAGTGTATGAGGT+GGG | + | chr4_4:63955459-63955478 | Msa0694620:intron | 40.0% | |
TATTAGCTACTTCCAAGTCC+AGG | - | chr4_4:63955701-63955720 | None:intergenic | 40.0% | |
TGTCTCTGCATGAACAGAAA+CGG | - | chr4_4:63955727-63955746 | None:intergenic | 40.0% | |
TTTCTGTTAATGCAGGAGAC+AGG | + | chr4_4:63955805-63955824 | Msa0694620:intron | 40.0% | |
ACAGATATTACAGCTGGTGA+TGG | + | chr4_4:63955844-63955863 | Msa0694620:CDS | 40.0% | |
! | TGGAAGACGCTATTGATGAT+TGG | + | chr4_4:63955864-63955883 | Msa0694620:CDS | 40.0% |
! | CTATTGATGATTGGCTCTTG+AGG | + | chr4_4:63955873-63955892 | Msa0694620:CDS | 40.0% |
AAAGAGGACACTATTGCACA+AGG | + | chr4_4:63955914-63955933 | Msa0694620:CDS | 40.0% | |
AAGAGGACACTATTGCACAA+GGG | + | chr4_4:63955915-63955934 | Msa0694620:CDS | 40.0% | |
ACACTATTGCACAAGGGATT+CGG | + | chr4_4:63955921-63955940 | Msa0694620:CDS | 40.0% | |
TTTGTTGGATGTGTGCTTCT+AGG | + | chr4_4:63956085-63956104 | Msa0694620:intron | 40.0% | |
TTGTTGGATGTGTGCTTCTA+GGG | + | chr4_4:63956086-63956105 | Msa0694620:intron | 40.0% | |
! | AGGGCATTAGATAGATGCTA+TGG | + | chr4_4:63956105-63956124 | Msa0694620:intron | 40.0% |
! | ACTAGTTTGAGAGCTTTAGC+GGG | - | chr4_4:63956309-63956328 | None:intergenic | 40.0% |
!! | GACTAGTTTGAGAGCTTTAG+CGG | - | chr4_4:63956310-63956329 | None:intergenic | 40.0% |
TCTAGCAGACATGCAGAATT+TGG | + | chr4_4:63956435-63956454 | Msa0694620:intron | 40.0% | |
!! | CTGCCACCATTTGTTATTTG+GGG | - | chr4_4:63956687-63956706 | None:intergenic | 40.0% |
!! | CACTGCCACCATTTGTTATT+TGG | - | chr4_4:63956689-63956708 | None:intergenic | 40.0% |
CAAACAATAACTGGATCTGG+GGG | + | chr4_4:63956723-63956742 | Msa0694620:CDS | 40.0% | |
AAACAATAACTGGATCTGGG+GGG | + | chr4_4:63956724-63956743 | Msa0694620:CDS | 40.0% | |
GACATCAAGAAACTGCTCTT+TGG | + | chr4_4:63956813-63956832 | Msa0694620:CDS | 40.0% | |
! | AACAGGGTGTTCATAACTGA+CGG | - | chr4_4:63956970-63956989 | None:intergenic | 40.0% |
! | AATCCCCATGTTTTGCTTGT+CGG | + | chr4_4:63957040-63957059 | Msa0694620:intron | 40.0% |
TTACCGACAAGCAAAACATG+GGG | - | chr4_4:63957046-63957065 | None:intergenic | 40.0% | |
! | GTAAAAAGAGTGCGTTGCAA+GGG | - | chr4_4:63957074-63957093 | None:intergenic | 40.0% |
! | TGTAAAAAGAGTGCGTTGCA+AGG | - | chr4_4:63957075-63957094 | None:intergenic | 40.0% |
ATACAAACGGCACAAACGAA+GGG | - | chr4_4:63957255-63957274 | None:intergenic | 40.0% | |
AATACAAACGGCACAAACGA+AGG | - | chr4_4:63957256-63957275 | None:intergenic | 40.0% | |
!! | TTTGTGCCGTTTGTATTGAC+TGG | + | chr4_4:63957259-63957278 | Msa0694620:intron | 40.0% |
TAGCTGCCAGTCAATACAAA+CGG | - | chr4_4:63957268-63957287 | None:intergenic | 40.0% | |
! | AGGGAGTGTGTTAGTGTAAT+TGG | + | chr4_4:63957356-63957375 | Msa0694620:intron | 40.0% |
GAGTTTAGACTCTCTTGAAG+AGG | + | chr4_4:63957533-63957552 | Msa0694620:intron | 40.0% | |
! | ACTCTCTTGAAGAGGTTTTC+TGG | + | chr4_4:63957541-63957560 | Msa0694620:intron | 40.0% |
!! | TTGAAGAGGTTTTCTGGTGA+AGG | + | chr4_4:63957547-63957566 | Msa0694620:intron | 40.0% |
CAACTTTAGTCAGCTTGATC+GGG | + | chr4_4:63957713-63957732 | Msa0694620:CDS | 40.0% | |
GCAAGTTGCTTCATACATAC+AGG | - | chr4_4:63957907-63957926 | None:intergenic | 40.0% | |
ATTCCTCATCTCAGGAAAGA+TGG | - | chr4_4:63957959-63957978 | None:intergenic | 40.0% | |
AACACAACATTCCTCATCTC+AGG | - | chr4_4:63957967-63957986 | None:intergenic | 40.0% | |
CACATGTGATGAAGAACTCA+CGG | - | chr4_4:63958024-63958043 | None:intergenic | 40.0% | |
TTCTTCATCACATGTGGTAG+TGG | + | chr4_4:63958028-63958047 | Msa0694620:three_prime_UTR | 40.0% | |
ACATGAAATTTGGAAGACGG+TGG | + | chr4_4:63958065-63958084 | Msa0694620:three_prime_UTR | 40.0% | |
AAATTTGGAAGACGGTGGTT+TGG | + | chr4_4:63958070-63958089 | Msa0694620:three_prime_UTR | 40.0% | |
GGAGCTATGACAGATGATTT+AGG | + | chr4_4:63958117-63958136 | Msa0694620:three_prime_UTR | 40.0% | |
! | AGGCATATACCCCATTTTCA+TGG | + | chr4_4:63958242-63958261 | Msa0694620:three_prime_UTR | 40.0% |
! | GGCATATACCCCATTTTCAT+GGG | + | chr4_4:63958243-63958262 | Msa0694620:three_prime_UTR | 40.0% |
! | GCATATACCCCATTTTCATG+GGG | + | chr4_4:63958244-63958263 | Msa0694620:three_prime_UTR | 40.0% |
CGTTTAGTCATTGGGATTAG+AGG | + | chr4_4:63958328-63958347 | Msa0694620:three_prime_UTR | 40.0% | |
CAAAAACACACACCTTGGTG+CGG | + | chr4_4:63946190-63946209 | Msa0694620:five_prime_UTR | 45.0% | |
! | AACAACCTTTTACCGCACCA+AGG | - | chr4_4:63946205-63946224 | None:intergenic | 45.0% |
CAGATCATTCACACTCTCCA+TGG | - | chr4_4:63946276-63946295 | None:intergenic | 45.0% | |
! | TTCCTCTTCCATTTTACCGG+GGG | - | chr4_4:63946677-63946696 | None:intergenic | 45.0% |
TGATCAGGAAACTCCCTATC+TGG | - | chr4_4:63946794-63946813 | None:intergenic | 45.0% | |
TCACACCTTGTACTCACTCT+CGG | - | chr4_4:63947148-63947167 | None:intergenic | 45.0% | |
CGAGATATTGAGCGAATCAC+GGG | - | chr4_4:63947329-63947348 | None:intergenic | 45.0% | |
CCGAGATATTGAGCGAATCA+CGG | - | chr4_4:63947330-63947349 | None:intergenic | 45.0% | |
CCGTGATTCGCTCAATATCT+CGG | + | chr4_4:63947327-63947346 | Msa0694620:CDS | 45.0% | |
CGTGATTCGCTCAATATCTC+GGG | + | chr4_4:63947328-63947347 | Msa0694620:CDS | 45.0% | |
!!! | TCGGGAACTTTTGACTTGCT+TGG | + | chr4_4:63947346-63947365 | Msa0694620:CDS | 45.0% |
GGGCTTGCCAAATTCATAAC+AGG | - | chr4_4:63947380-63947399 | None:intergenic | 45.0% | |
GTTATGAATTTGGCAAGCCC+AGG | + | chr4_4:63947380-63947399 | Msa0694620:CDS | 45.0% | |
ACAATATGGGCTCTACGGAA+TGG | + | chr4_4:63947472-63947491 | Msa0694620:intron | 45.0% | |
TGTGTTTATGTAGGGACTCG+GGG | + | chr4_4:63947535-63947554 | Msa0694620:intron | 45.0% | |
TAGGGCCCATTTGGTTAAGT+AGG | + | chr4_4:63947583-63947602 | Msa0694620:intron | 45.0% | |
GGCTAGAAATCTCTTCTGCA+AGG | + | chr4_4:63947887-63947906 | Msa0694620:intron | 45.0% | |
TCAGCCCTAGGAGTTAGTTA+GGG | - | chr4_4:63948042-63948061 | None:intergenic | 45.0% | |
ACCCATCTGAATGAAACTGC+CGG | + | chr4_4:63948071-63948090 | Msa0694620:intron | 45.0% | |
ACCGGCAGTTTCATTCAGAT+GGG | - | chr4_4:63948075-63948094 | None:intergenic | 45.0% | |
TGAAACTGCCGGTGGAAAAT+AGG | + | chr4_4:63948082-63948101 | Msa0694620:intron | 45.0% | |
! | AATGGGTGCCTATTTTCCAC+CGG | - | chr4_4:63948093-63948112 | None:intergenic | 45.0% |
AGCCTTCAACGGTTGAGAAT+GGG | - | chr4_4:63948110-63948129 | None:intergenic | 45.0% | |
!! | GTGTTGGAGATGGGTTATAC+GGG | + | chr4_4:63948153-63948172 | Msa0694620:intron | 45.0% |
GTTTCTTCTGACCAAACCGA+AGG | - | chr4_4:63948185-63948204 | None:intergenic | 45.0% | |
! | TAGCACGACTTGAAGTGTTC+CGG | - | chr4_4:63948252-63948271 | None:intergenic | 45.0% |
CAAACATCGTGTGAAACTGC+AGG | - | chr4_4:63948288-63948307 | None:intergenic | 45.0% | |
GAATTGGAAACGAACAAGGG+AGG | + | chr4_4:63948363-63948382 | Msa0694620:intron | 45.0% | |
GTAGTAGTAGGATGGGACAT+TGG | + | chr4_4:63948615-63948634 | Msa0694620:intron | 45.0% | |
!! | GAAGGATGGTGGAAAGACAT+TGG | + | chr4_4:63948645-63948664 | Msa0694620:intron | 45.0% |
TGATAAATGGGAAACGCGTG+TGG | + | chr4_4:63948682-63948701 | Msa0694620:intron | 45.0% | |
! | TACATACTTCGAGGTTCGGT+CGG | + | chr4_4:63948776-63948795 | Msa0694620:intron | 45.0% |
!! | CAGTTAAGAGTGGGCTGATA+CGG | - | chr4_4:63948844-63948863 | None:intergenic | 45.0% |
!! | GTTGTATGGCGGGTTTGATT+GGG | - | chr4_4:63948892-63948911 | None:intergenic | 45.0% |
AGGATAAGAAGGACGTCGTT+AGG | - | chr4_4:63948993-63949012 | None:intergenic | 45.0% | |
ATAAAACTCAGTGGTGGCCA+TGG | - | chr4_4:63949301-63949320 | None:intergenic | 45.0% | |
GCTTAAAGAGCTATTGCGTG+AGG | - | chr4_4:63949544-63949563 | None:intergenic | 45.0% | |
AACTCTGTTGCTAATAGCGG+CGG | + | chr4_4:63950035-63950054 | Msa0694620:CDS | 45.0% | |
CCAATGTCATCTCAGTTCCT+TGG | - | chr4_4:63950103-63950122 | None:intergenic | 45.0% | |
CCAAGGAACTGAGATGACAT+TGG | + | chr4_4:63950100-63950119 | Msa0694620:CDS | 45.0% | |
ATTGGCCAAAATGAGTGACC+AGG | + | chr4_4:63950118-63950137 | Msa0694620:CDS | 45.0% | |
TTGGCCAAAATGAGTGACCA+GGG | + | chr4_4:63950119-63950138 | Msa0694620:CDS | 45.0% | |
TTTGTAAGGATGTCTCTCCC+TGG | - | chr4_4:63950139-63950158 | None:intergenic | 45.0% | |
AACATTTGTGCCCAATCAGC+AGG | - | chr4_4:63950197-63950216 | None:intergenic | 45.0% | |
! | TGCTGATTGGGCACAAATGT+TGG | + | chr4_4:63950196-63950215 | Msa0694620:CDS | 45.0% |
TGATTGGGCACAAATGTTGG+AGG | + | chr4_4:63950199-63950218 | Msa0694620:CDS | 45.0% | |
CCGAGAATCTTGAGAACATG+TGG | + | chr4_4:63950255-63950274 | Msa0694620:CDS | 45.0% | |
CTTGAGAACATGTGGGCAAA+AGG | + | chr4_4:63950263-63950282 | Msa0694620:CDS | 45.0% | |
TCAGAAGCAGAACTCTTGGT+GGG | - | chr4_4:63950344-63950363 | None:intergenic | 45.0% | |
ACAGTCAGAAGCAGAACTCT+TGG | - | chr4_4:63950348-63950367 | None:intergenic | 45.0% | |
GTACTTGCAACGCTTTGTAG+TGG | - | chr4_4:63950482-63950501 | None:intergenic | 45.0% | |
ACAAAGGACCATGCTTCTGA+AGG | + | chr4_4:63950581-63950600 | Msa0694620:CDS | 45.0% | |
CAAAGGACCATGCTTCTGAA+GGG | + | chr4_4:63950582-63950601 | Msa0694620:CDS | 45.0% | |
!! | TTGATTAGGGTGGATTGCCA+AGG | - | chr4_4:63950645-63950664 | None:intergenic | 45.0% |
GCAATCCACCCTAATCAAGA+AGG | + | chr4_4:63950647-63950666 | Msa0694620:CDS | 45.0% | |
AGCTACCTTCTTGATTAGGG+TGG | - | chr4_4:63950655-63950674 | None:intergenic | 45.0% | |
!! | AAAGGCATCATCAGTGTTCG+AGG | - | chr4_4:63951611-63951630 | None:intergenic | 45.0% |
TGCCCTAAGGATGCAAGTTA+AGG | - | chr4_4:63951845-63951864 | None:intergenic | 45.0% | |
CAAGCTGATACACACCTTTG+AGG | - | chr4_4:63952024-63952043 | None:intergenic | 45.0% | |
TGCCTTCTCTCGGTTTATTG+AGG | + | chr4_4:63952483-63952502 | Msa0694620:intron | 45.0% | |
! | TCTAGGTCATTGTTTCGGGT+AGG | + | chr4_4:63952530-63952549 | Msa0694620:intron | 45.0% |
GGTCATTTAAATTGGGACGG+AGG | - | chr4_4:63952647-63952666 | None:intergenic | 45.0% | |
TATTGTACGCCAGTTCAAGG+GGG | + | chr4_4:63953274-63953293 | Msa0694620:CDS | 45.0% | |
AGGGGGTTTCAGATGGTTTA+AGG | + | chr4_4:63953291-63953310 | Msa0694620:CDS | 45.0% | |
! | GGTTTAAGGCGAAAAGTTGG+TGG | + | chr4_4:63953305-63953324 | Msa0694620:CDS | 45.0% |
ATCACCATCCCTCATCAATG+AGG | + | chr4_4:63953328-63953347 | Msa0694620:CDS | 45.0% | |
TCACCATCCCTCATCAATGA+GGG | + | chr4_4:63953329-63953348 | Msa0694620:CDS | 45.0% | |
GCCTTGGAATGCAGATGAAT+TGG | + | chr4_4:63953373-63953392 | Msa0694620:CDS | 45.0% | |
! | TGTTGTAGCACTTTGCTGTG+TGG | - | chr4_4:63953408-63953427 | None:intergenic | 45.0% |
CTGATACTGAGGACAGTGAT+AGG | + | chr4_4:63953441-63953460 | Msa0694620:CDS | 45.0% | |
TGATAGACAGCGTGATCTGT+CGG | + | chr4_4:63953583-63953602 | Msa0694620:CDS | 45.0% | |
TTCTCTGCTCCCGTACTTAA+CGG | + | chr4_4:63953773-63953792 | Msa0694620:intron | 45.0% | |
GCAGCATACTTTGTCAAGCT+AGG | + | chr4_4:63953862-63953881 | Msa0694620:intron | 45.0% | |
TCATTAGCGTGCCAAAAGCT+TGG | + | chr4_4:63954016-63954035 | Msa0694620:intron | 45.0% | |
CCATGAGCTTCTACTTCCAA+AGG | - | chr4_4:63954087-63954106 | None:intergenic | 45.0% | |
! | CCTTTGGAAGTAGAAGCTCA+TGG | + | chr4_4:63954084-63954103 | Msa0694620:intron | 45.0% |
! | CTTCTGGAAGTAGAAGCTCA+CGG | - | chr4_4:63954274-63954293 | None:intergenic | 45.0% |
ATGCGACAGATGTTGTCTTC+TGG | - | chr4_4:63954290-63954309 | None:intergenic | 45.0% | |
!! | CTATGGTGGACCACTTTGAT+AGG | - | chr4_4:63954352-63954371 | None:intergenic | 45.0% |
!!! | TGCTGTTCCCGAAAGTGTTT+TGG | + | chr4_4:63954781-63954800 | Msa0694620:intron | 45.0% |
TAACCTGGAGAAAGGAGGAA+TGG | + | chr4_4:63954877-63954896 | Msa0694620:intron | 45.0% | |
AGGGACACTAACATTAGGAG+GGG | - | chr4_4:63955025-63955044 | None:intergenic | 45.0% | |
GAGGGACACTAACATTAGGA+GGG | - | chr4_4:63955026-63955045 | None:intergenic | 45.0% | |
AGAGGGACACTAACATTAGG+AGG | - | chr4_4:63955027-63955046 | None:intergenic | 45.0% | |
GTGTGTAAGTGTATGAGGTG+GGG | + | chr4_4:63955460-63955479 | Msa0694620:intron | 45.0% | |
! | AATGCAGGAGACAGGTGTTT+TGG | + | chr4_4:63955813-63955832 | Msa0694620:intron | 45.0% |
!!! | TTCAGAGTGAGAGTGCCTTT+TGG | - | chr4_4:63956388-63956407 | None:intergenic | 45.0% |
AACAGGCAGTGGCATCAATA+CGG | - | chr4_4:63956470-63956489 | None:intergenic | 45.0% | |
GTCTACTAGAAAACAGGCAG+TGG | - | chr4_4:63956481-63956500 | None:intergenic | 45.0% | |
! | TGTTCTGTGGCCATGTTTTC+AGG | + | chr4_4:63956620-63956639 | Msa0694620:intron | 45.0% |
!!! | ACACGAATCTGGCTCTTTTG+AGG | + | chr4_4:63956761-63956780 | Msa0694620:CDS | 45.0% |
!! | CTCTTTTGAGGAACAGCTTG+AGG | + | chr4_4:63956773-63956792 | Msa0694620:CDS | 45.0% |
AACGAGTCACAGAGCTAACA+GGG | - | chr4_4:63956986-63957005 | None:intergenic | 45.0% | |
AAACGAGTCACAGAGCTAAC+AGG | - | chr4_4:63956987-63957006 | None:intergenic | 45.0% | |
TTACACTAACACACTCCCTG+TGG | - | chr4_4:63957355-63957374 | None:intergenic | 45.0% | |
! | AGAGAATGCAGTAACGGAGT+AGG | - | chr4_4:63957795-63957814 | None:intergenic | 45.0% |
ACTCCGTTACTGCATTCTCT+TGG | + | chr4_4:63957795-63957814 | Msa0694620:intron | 45.0% | |
GCACCAAGAGAATGCAGTAA+CGG | - | chr4_4:63957801-63957820 | None:intergenic | 45.0% | |
GCAACTTGCCTATGCAATTC+TGG | + | chr4_4:63957918-63957937 | Msa0694620:CDS | 45.0% | |
TCTCCATCTTTCCTGAGATG+AGG | + | chr4_4:63957953-63957972 | Msa0694620:CDS | 45.0% | |
CGTGAGTTCTTCATCACATG+TGG | + | chr4_4:63958022-63958041 | Msa0694620:exon | 45.0% | |
!!! | ATTTTAATGTATAATAAATA+CGG | - | chr4_4:63947995-63948014 | None:intergenic | 5.0% |
!!! | TGAATTTAATTTATTTATTA+GGG | - | chr4_4:63951881-63951900 | None:intergenic | 5.0% |
!!! | ATGAATTTAATTTATTTATT+AGG | - | chr4_4:63951882-63951901 | None:intergenic | 5.0% |
TAGGTCGTGTTGGACTCAAC+TGG | + | chr4_4:63945997-63946016 | Msa0694620:five_prime_UTR | 50.0% | |
! | ACACACCTTGGTGCGGTAAA+AGG | + | chr4_4:63946197-63946216 | Msa0694620:five_prime_UTR | 50.0% |
AGTTCAAGCTCCGCACTCTT+TGG | + | chr4_4:63946303-63946322 | Msa0694620:CDS | 50.0% | |
! | GGAAGCACACTAGATAGACG+CGG | - | chr4_4:63946656-63946675 | None:intergenic | 50.0% |
TCTATCTAGTGTGCTTCCCC+CGG | + | chr4_4:63946658-63946677 | Msa0694620:CDS | 50.0% | |
TTCCCCCGGTAAAATGGAAG+AGG | + | chr4_4:63946672-63946691 | Msa0694620:CDS | 50.0% | |
TCCTGTTGTGGAGGATGCAA+TGG | + | chr4_4:63946706-63946725 | Msa0694620:CDS | 50.0% | |
AGGAGCTTCATCCAGCACTA+AGG | + | chr4_4:63947118-63947137 | Msa0694620:CDS | 50.0% | |
CACACCTTGTACTCACTCTC+GGG | - | chr4_4:63947147-63947166 | None:intergenic | 50.0% | |
GAGTGAGTACAAGGTGTGAG+TGG | + | chr4_4:63947149-63947168 | Msa0694620:intron | 50.0% | |
ACAAGGTGTGAGTGGATCAG+TGG | + | chr4_4:63947157-63947176 | Msa0694620:intron | 50.0% | |
GTGTTTATGTAGGGACTCGG+GGG | + | chr4_4:63947536-63947555 | Msa0694620:intron | 50.0% | |
TGTTTATGTAGGGACTCGGG+GGG | + | chr4_4:63947537-63947556 | Msa0694620:intron | 50.0% | |
CTCAGCCCTAGGAGTTAGTT+AGG | - | chr4_4:63948043-63948062 | None:intergenic | 50.0% | |
CACCGGCAGTTTCATTCAGA+TGG | - | chr4_4:63948076-63948095 | None:intergenic | 50.0% | |
CATCTGAATGAAACTGCCGG+TGG | + | chr4_4:63948074-63948093 | Msa0694620:intron | 50.0% | |
CACCCATTCTCAACCGTTGA+AGG | + | chr4_4:63948105-63948124 | Msa0694620:intron | 50.0% | |
GAGCCTTCAACGGTTGAGAA+TGG | - | chr4_4:63948111-63948130 | None:intergenic | 50.0% | |
TTCTCAACCGTTGAAGGCTC+TGG | + | chr4_4:63948111-63948130 | Msa0694620:intron | 50.0% | |
! | ACCGTTGAAGGCTCTGGTTT+AGG | + | chr4_4:63948117-63948136 | Msa0694620:intron | 50.0% |
GCCTAAACCAGAGCCTTCAA+CGG | - | chr4_4:63948121-63948140 | None:intergenic | 50.0% | |
! | GTTGAAGGCTCTGGTTTAGG+CGG | + | chr4_4:63948120-63948139 | Msa0694620:intron | 50.0% |
! | CTCTGGTTTAGGCGGATTTC+AGG | + | chr4_4:63948128-63948147 | Msa0694620:intron | 50.0% |
!! | AGGCGGATTTCAGGTTGTGT+TGG | + | chr4_4:63948137-63948156 | Msa0694620:intron | 50.0% |
!! | TTGGAGATGGGTTATACGGG+TGG | + | chr4_4:63948156-63948175 | Msa0694620:intron | 50.0% |
!! | TGGAGATGGGTTATACGGGT+GGG | + | chr4_4:63948157-63948176 | Msa0694620:intron | 50.0% |
! | GTTATACGGGTGGGTTCCTT+CGG | + | chr4_4:63948166-63948185 | Msa0694620:intron | 50.0% |
ACATTGGCAGAGGAGAAGGA+TGG | + | chr4_4:63948631-63948650 | Msa0694620:intron | 50.0% | |
! | ACATACTTCGAGGTTCGGTC+GGG | + | chr4_4:63948777-63948796 | Msa0694620:intron | 50.0% |
!! | TAAGAGTGGGCTGATACGGT+CGG | - | chr4_4:63948840-63948859 | None:intergenic | 50.0% |
!! | TGGCGGGTTTGATTGGGTTT+CGG | - | chr4_4:63948886-63948905 | None:intergenic | 50.0% |
!! | GGTTGTATGGCGGGTTTGAT+TGG | - | chr4_4:63948893-63948912 | None:intergenic | 50.0% |
CGTCGTTAGGATATGCGACA+AGG | - | chr4_4:63948980-63948999 | None:intergenic | 50.0% | |
TCTAACATGGTCCCTCATGC+TGG | + | chr4_4:63949246-63949265 | Msa0694620:intron | 50.0% | |
CTAACATGGTCCCTCATGCT+GGG | + | chr4_4:63949247-63949266 | Msa0694620:intron | 50.0% | |
! | CTCTCCCTGGTCACTCATTT+TGG | - | chr4_4:63950126-63950145 | None:intergenic | 50.0% |
TGTTGGAGGTTGCAACTCAG+AGG | + | chr4_4:63950213-63950232 | Msa0694620:CDS | 50.0% | |
GTCAGAAGCAGAACTCTTGG+TGG | - | chr4_4:63950345-63950364 | None:intergenic | 50.0% | |
TCTACCTTCAACGCATGCCT+TGG | + | chr4_4:63950448-63950467 | Msa0694620:CDS | 50.0% | |
TTCAACGCATGCCTTGGCTA+CGG | + | chr4_4:63950454-63950473 | Msa0694620:CDS | 50.0% | |
!! | TTGTAGTGGATCCGTAGCCA+AGG | - | chr4_4:63950468-63950487 | None:intergenic | 50.0% |
! | TTGAGAGGCGCGAAGGATTT+CGG | + | chr4_4:63950705-63950724 | Msa0694620:CDS | 50.0% |
GGCAATTAGCTCCAAAGCTC+CGG | + | chr4_4:63950765-63950784 | Msa0694620:CDS | 50.0% | |
CAAAATTGCATACCCGGCAC+CGG | - | chr4_4:63950787-63950806 | None:intergenic | 50.0% | |
GGGAAAGGGTTATGCCCTTA+AGG | + | chr4_4:63951700-63951719 | Msa0694620:intron | 50.0% | |
TCAGTGATGAAGACCTTGGC+AGG | + | chr4_4:63952179-63952198 | Msa0694620:CDS | 50.0% | |
! | TTGTTTCGGGTAGGTTGAGC+AGG | + | chr4_4:63952539-63952558 | Msa0694620:intron | 50.0% |
! | CATCTGAAACCCCCTTGAAC+TGG | - | chr4_4:63953286-63953305 | None:intergenic | 50.0% |
CAGTTCAAGGGGGTTTCAGA+TGG | + | chr4_4:63953284-63953303 | Msa0694620:CDS | 50.0% | |
CACCATCCCTCATCAATGAG+GGG | + | chr4_4:63953330-63953349 | Msa0694620:CDS | 50.0% | |
AGAAGGCCCCTCATTGATGA+GGG | - | chr4_4:63953339-63953358 | None:intergenic | 50.0% | |
TAGAAGGCCCCTCATTGATG+AGG | - | chr4_4:63953340-63953359 | None:intergenic | 50.0% | |
TACTGACGAGTCCAGCAACT+TGG | + | chr4_4:63953556-63953575 | Msa0694620:CDS | 50.0% | |
ATCAAGGACCGCAACACGAA+TGG | + | chr4_4:63954494-63954513 | Msa0694620:intron | 50.0% | |
ACTCCATTCCTCCTTTCTCC+AGG | - | chr4_4:63954883-63954902 | None:intergenic | 50.0% | |
ACACACTAAATGGGGGCTTG+AGG | - | chr4_4:63955446-63955465 | None:intergenic | 50.0% | |
!! | TGAGGCAGATTCACTGGCTT+CGG | + | chr4_4:63955891-63955910 | Msa0694620:CDS | 50.0% |
!! | GATTCACTGGCTTCGGAAAG+AGG | + | chr4_4:63955898-63955917 | Msa0694620:CDS | 50.0% |
CTATTGCACAAGGGATTCGG+TGG | + | chr4_4:63955924-63955943 | Msa0694620:CDS | 50.0% | |
AGTTCCGTGGTCTCTTTAGG+TGG | - | chr4_4:63956246-63956265 | None:intergenic | 50.0% | |
TGCAGTTCCGTGGTCTCTTT+AGG | - | chr4_4:63956249-63956268 | None:intergenic | 50.0% | |
AAGAGACCACGGAACTGCAT+AGG | + | chr4_4:63956250-63956269 | Msa0694620:intron | 50.0% | |
GCAAAACCTATGCAGTTCCG+TGG | - | chr4_4:63956259-63956278 | None:intergenic | 50.0% | |
ACAGGCAGTGGCATCAATAC+GGG | - | chr4_4:63956469-63956488 | None:intergenic | 50.0% | |
AAAACTTACCACCAGGCCAG+AGG | - | chr4_4:63956647-63956666 | None:intergenic | 50.0% | |
AGCTCTGTGACTCGTTTGCA+CGG | + | chr4_4:63956990-63957009 | Msa0694620:intron | 50.0% | |
GTCGTGTTGGACTCAACTGG+TGG | + | chr4_4:63946000-63946019 | Msa0694620:five_prime_UTR | 55.0% | |
GAGTGCGGAGCTTGAACTCT+TGG | - | chr4_4:63946301-63946320 | None:intergenic | 55.0% | |
TCAAGCTCCGCACTCTTTGG+TGG | + | chr4_4:63946306-63946325 | Msa0694620:CDS | 55.0% | |
CAAGCTCCGCACTCTTTGGT+GGG | + | chr4_4:63946307-63946326 | Msa0694620:CDS | 55.0% | |
AGAGAGCCCACCAAAGAGTG+CGG | - | chr4_4:63946316-63946335 | None:intergenic | 55.0% | |
GTGTGCTTCCCCCGGTAAAA+TGG | + | chr4_4:63946666-63946685 | Msa0694620:CDS | 55.0% | |
GCCATTGCATCCTCCACAAC+AGG | - | chr4_4:63946710-63946729 | None:intergenic | 55.0% | |
GTCTCCCGAGAGTGAGTACA+AGG | + | chr4_4:63947140-63947159 | Msa0694620:CDS | 55.0% | |
AACTCCTAGGGCTGAGCATC+TGG | + | chr4_4:63948047-63948066 | Msa0694620:intron | 55.0% | |
GTAGGATGGGACATTGGCAG+AGG | + | chr4_4:63948621-63948640 | Msa0694620:intron | 55.0% | |
TGGGACATTGGCAGAGGAGA+AGG | + | chr4_4:63948627-63948646 | Msa0694620:intron | 55.0% | |
TTGGCAGAGGAGAAGGATGG+TGG | + | chr4_4:63948634-63948653 | Msa0694620:intron | 55.0% | |
GGGAAACGCGTGTGGTATTG+AGG | + | chr4_4:63948690-63948709 | Msa0694620:intron | 55.0% | |
! | TTCGAGGTTCGGTCGGGTAT+GGG | + | chr4_4:63948783-63948802 | Msa0694620:intron | 55.0% |
!! | AAGAGTGGGCTGATACGGTC+GGG | - | chr4_4:63948839-63948858 | None:intergenic | 55.0% |
! | GGCGGGTTTGATTGGGTTTC+GGG | - | chr4_4:63948885-63948904 | None:intergenic | 55.0% |
!!! | TGGTTTTATCGGGTTCCGGG+TGG | + | chr4_4:63948924-63948943 | Msa0694620:intron | 55.0% |
!! | GGTTTTATCGGGTTCCGGGT+GGG | + | chr4_4:63948925-63948944 | Msa0694620:intron | 55.0% |
GCAAAAGATGGTGACCCACC+CGG | - | chr4_4:63948942-63948961 | None:intergenic | 55.0% | |
! | ACAGCCCAAGCCTGCTGATT+GGG | + | chr4_4:63950184-63950203 | Msa0694620:CDS | 55.0% |
TGTGCCCAATCAGCAGGCTT+GGG | - | chr4_4:63950191-63950210 | None:intergenic | 55.0% | |
TTGTGCCCAATCAGCAGGCT+TGG | - | chr4_4:63950192-63950211 | None:intergenic | 55.0% | |
GGCATGCGTTGAAGGTAGAG+AGG | - | chr4_4:63950447-63950466 | None:intergenic | 55.0% | |
GTAGCCAAGGCATGCGTTGA+AGG | - | chr4_4:63950455-63950474 | None:intergenic | 55.0% | |
GTCTAGCAGTGCTTCTGCCT+TGG | + | chr4_4:63950625-63950644 | Msa0694620:CDS | 55.0% | |
CTTCGCGCCTCTCAAATTCC+GGG | - | chr4_4:63950700-63950719 | None:intergenic | 55.0% | |
CCTTCGCGCCTCTCAAATTC+CGG | - | chr4_4:63950701-63950720 | None:intergenic | 55.0% | |
! | TGAGAGGCGCGAAGGATTTC+GGG | + | chr4_4:63950706-63950725 | Msa0694620:CDS | 55.0% |
!! | CGGTGCCGGGTATGCAATTT+TGG | + | chr4_4:63950785-63950804 | Msa0694620:intron | 55.0% |
TAGACAGCGTGATCTGTCGG+AGG | + | chr4_4:63953586-63953605 | Msa0694620:CDS | 55.0% | |
GTGATCTGTCGGAGGAAGCT+AGG | + | chr4_4:63953594-63953613 | Msa0694620:CDS | 55.0% | |
GTGCCACCTGAGGTATGTGT+AGG | + | chr4_4:63953683-63953702 | Msa0694620:intron | 55.0% | |
CAGCCTACACATACCTCAGG+TGG | - | chr4_4:63953689-63953708 | None:intergenic | 55.0% | |
CAGCAGCCTACACATACCTC+AGG | - | chr4_4:63953692-63953711 | None:intergenic | 55.0% | |
TGTCTCTGCGACCACGATTG+AGG | + | chr4_4:63954444-63954463 | Msa0694620:intron | 55.0% | |
GGCTCTTGAGGCAGATTCAC+TGG | + | chr4_4:63955885-63955904 | Msa0694620:CDS | 55.0% | |
CGTGGTCTCTTTAGGTGGAG+CGG | - | chr4_4:63956241-63956260 | None:intergenic | 55.0% | |
CGCTCCACCTAAAGAGACCA+CGG | + | chr4_4:63956239-63956258 | Msa0694620:intron | 55.0% | |
!!! | GGCCATGTTTTCAGGTCCTC+TGG | + | chr4_4:63956628-63956647 | Msa0694620:intron | 55.0% |
GGCCAGAGGACCTGAAAACA+TGG | - | chr4_4:63956633-63956652 | None:intergenic | 55.0% | |
!!! | TGTTTTCAGGTCCTCTGGCC+TGG | + | chr4_4:63956633-63956652 | Msa0694620:intron | 55.0% |
GATGAAGAACTCACGGCGCT+TGG | - | chr4_4:63958017-63958036 | None:intergenic | 55.0% | |
CTCTCGGGAGACCTTAGTGC+TGG | - | chr4_4:63947132-63947151 | None:intergenic | 60.0% | |
! | GGGACTCGGGGGGTTTTTGT+AGG | + | chr4_4:63947547-63947566 | Msa0694620:intron | 60.0% |
! | ACGGGTGGGTTCCTTCGGTT+TGG | + | chr4_4:63948171-63948190 | Msa0694620:intron | 60.0% |
! | CTTCGAGGTTCGGTCGGGTA+TGG | + | chr4_4:63948782-63948801 | Msa0694620:intron | 60.0% |
CATGGTCCCTCATGCTGGGA+CGG | + | chr4_4:63949251-63949270 | Msa0694620:intron | 60.0% | |
ATGCTGGGACGGAGGGAGAA+GGG | + | chr4_4:63949262-63949281 | Msa0694620:intron | 60.0% | |
CACAGCCCAAGCCTGCTGAT+TGG | + | chr4_4:63950183-63950202 | Msa0694620:CDS | 60.0% | |
! | CCGGAATTTGAGAGGCGCGA+AGG | + | chr4_4:63950698-63950717 | Msa0694620:CDS | 60.0% |
! | GAGAGGCGCGAAGGATTTCG+GGG | + | chr4_4:63950707-63950726 | Msa0694620:CDS | 60.0% |
TAGCTCCAAAGCTCCGGTGC+CGG | + | chr4_4:63950771-63950790 | Msa0694620:CDS | 60.0% | |
GGCCCCTCATTGATGAGGGA+TGG | - | chr4_4:63953335-63953354 | None:intergenic | 60.0% | |
! | TCCTGTTGGAGTGCCACCTG+AGG | + | chr4_4:63953673-63953692 | Msa0694620:CDS | 60.0% |
ACCTCAGGTGGCACTCCAAC+AGG | - | chr4_4:63953677-63953696 | None:intergenic | 60.0% | |
! | TTTCAGGTCCTCTGGCCTGG+TGG | + | chr4_4:63956636-63956655 | Msa0694620:intron | 60.0% |
GGTGCCAGATGCTCAGCCCT+AGG | - | chr4_4:63948054-63948073 | None:intergenic | 65.0% | |
GATACGGTCGGGTGCGGTTC+TGG | - | chr4_4:63948828-63948847 | None:intergenic | 65.0% | |
TGGGCTGATACGGTCGGGTG+CGG | - | chr4_4:63948834-63948853 | None:intergenic | 65.0% | |
GTCCCTCATGCTGGGACGGA+GGG | + | chr4_4:63949255-63949274 | Msa0694620:intron | 65.0% | |
CTCCCTCCGTCCCAGCATGA+GGG | - | chr4_4:63949260-63949279 | None:intergenic | 65.0% | |
TCTCCCTCCGTCCCAGCATG+AGG | - | chr4_4:63949261-63949280 | None:intergenic | 65.0% | |
CATGCTGGGACGGAGGGAGA+AGG | + | chr4_4:63949261-63949280 | Msa0694620:intron | 65.0% | |
TGCTGGGACGGAGGGAGAAG+GGG | + | chr4_4:63949263-63949282 | Msa0694620:intron | 65.0% | |
GTGAGGGCAGTGACGACGTC+AGG | - | chr4_4:63949527-63949546 | None:intergenic | 65.0% | |
AGCTCCAAAGCTCCGGTGCC+GGG | + | chr4_4:63950772-63950791 | Msa0694620:CDS | 65.0% | |
! | CATACCCGGCACCGGAGCTT+TGG | - | chr4_4:63950779-63950798 | None:intergenic | 65.0% |
GGTCCCTCATGCTGGGACGG+AGG | + | chr4_4:63949254-63949273 | Msa0694620:intron | 70.0% | |
GCTGGGACGGAGGGAGAAGG+GGG | + | chr4_4:63949264-63949283 | Msa0694620:intron | 70.0% | |
GACGGAGGGAGAAGGGGGAC+TGG | + | chr4_4:63949269-63949288 | Msa0694620:intron | 70.0% | |
! | GAGGGAGAAGGGGGACTGGC+AGG | + | chr4_4:63949273-63949292 | Msa0694620:intron | 70.0% |
! | AGGGGGACTGGCAGGTGCCA+TGG | + | chr4_4:63949281-63949300 | Msa0694620:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 63945951 | 63958407 | 63945951 | ID=Msa0694620;Name=Msa0694620 |
chr4_4 | mRNA | 63945951 | 63958407 | 63945951 | ID=Msa0694620-mRNA-1;Parent=Msa0694620;Name=Msa0694620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=309|0.92|0.93|1|1|1|15|381|1026 |
chr4_4 | exon | 63945951 | 63946365 | 63945951 | ID=Msa0694620-mRNA-1:exon:18169;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63946492 | 63946894 | 63946492 | ID=Msa0694620-mRNA-1:exon:18170;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63946984 | 63947161 | 63946984 | ID=Msa0694620-mRNA-1:exon:18171;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63947263 | 63947402 | 63947263 | ID=Msa0694620-mRNA-1:exon:18172;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63949926 | 63950793 | 63949926 | ID=Msa0694620-mRNA-1:exon:18173;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63950972 | 63951072 | 63950972 | ID=Msa0694620-mRNA-1:exon:18174;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63951525 | 63951630 | 63951525 | ID=Msa0694620-mRNA-1:exon:18175;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63951960 | 63952028 | 63951960 | ID=Msa0694620-mRNA-1:exon:18176;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63952155 | 63952200 | 63952155 | ID=Msa0694620-mRNA-1:exon:18177;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63953249 | 63953694 | 63953249 | ID=Msa0694620-mRNA-1:exon:18178;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63955018 | 63955097 | 63955018 | ID=Msa0694620-mRNA-1:exon:18179;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63955820 | 63955955 | 63955820 | ID=Msa0694620-mRNA-1:exon:18180;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63956642 | 63956834 | 63956642 | ID=Msa0694620-mRNA-1:exon:18181;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63957701 | 63957783 | 63957701 | ID=Msa0694620-mRNA-1:exon:18182;Parent=Msa0694620-mRNA-1 |
chr4_4 | exon | 63957901 | 63958407 | 63957901 | ID=Msa0694620-mRNA-1:exon:18183;Parent=Msa0694620-mRNA-1 |
chr4_4 | five_prime_UTR | 63945951 | 63946259 | 63945951 | ID=Msa0694620-mRNA-1:five_prime_utr;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63946260 | 63946365 | 63946260 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63946492 | 63946894 | 63946492 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63946984 | 63947161 | 63946984 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63947263 | 63947402 | 63947263 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63949926 | 63950793 | 63949926 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63950972 | 63951072 | 63950972 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63951525 | 63951630 | 63951525 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63951960 | 63952028 | 63951960 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63952155 | 63952200 | 63952155 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63953249 | 63953694 | 63953249 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63955018 | 63955097 | 63955018 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63955820 | 63955955 | 63955820 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63956642 | 63956834 | 63956642 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63957701 | 63957783 | 63957701 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | CDS | 63957901 | 63958026 | 63957901 | ID=Msa0694620-mRNA-1:cds;Parent=Msa0694620-mRNA-1 |
chr4_4 | three_prime_UTR | 63958027 | 63958407 | 63958027 | ID=Msa0694620-mRNA-1:three_prime_utr;Parent=Msa0694620-mRNA-1 |
Gene Sequence |
Protein sequence |