Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856960 | XP_003616416.1 | 95.779 | 616 | 19 | 1 | 1 | 609 | 1 | 616 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856960 | sp|Q9FFY9|TRP4_ARATH | 44.548 | 642 | 298 | 14 | 1 | 599 | 1 | 627 | 1.34e-150 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856960 | G7KBS1 | 95.779 | 616 | 19 | 1 | 1 | 609 | 1 | 616 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0856960 | 0.805324 | 1.410048e-49 | -8.615850e-47 |
| Msa0020390 | Msa0856960 | 0.842630 | 2.299797e-58 | -8.615850e-47 |
| Msa0020410 | Msa0856960 | 0.802622 | 5.141634e-49 | -8.615850e-47 |
| Msa0026710 | Msa0856960 | 0.827258 | 1.727830e-54 | -8.615850e-47 |
| Msa0038870 | Msa0856960 | 0.812774 | 3.579249e-51 | -8.615850e-47 |
| Msa0043980 | Msa0856960 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0044000 | Msa0856960 | 0.804104 | 2.534962e-49 | -8.615850e-47 |
| Msa0059110 | Msa0856960 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0065950 | Msa0856960 | 0.824395 | 8.260945e-54 | -8.615850e-47 |
| Msa0079070 | Msa0856960 | 0.821735 | 3.446987e-53 | -8.615850e-47 |
| Msa0090360 | Msa0856960 | 0.804760 | 1.850357e-49 | -8.615850e-47 |
| Msa0090550 | Msa0856960 | 0.804940 | 1.696779e-49 | -8.615850e-47 |
| Msa0090570 | Msa0856960 | 0.847548 | 1.078801e-59 | -8.615850e-47 |
| Msa0118540 | Msa0856960 | 0.842452 | 2.563801e-58 | -8.615850e-47 |
| Msa0604290 | Msa0856960 | 0.837394 | 5.334418e-57 | -8.615850e-47 |
| Msa0608160 | Msa0856960 | 0.808941 | 2.417892e-50 | -8.615850e-47 |
| Msa0645530 | Msa0856960 | 0.807597 | 4.677814e-50 | -8.615850e-47 |
| Msa0648080 | Msa0856960 | 0.811085 | 8.351065e-51 | -8.615850e-47 |
| Msa0669720 | Msa0856960 | 0.804013 | 2.648077e-49 | -8.615850e-47 |
| Msa0672550 | Msa0856960 | 0.835539 | 1.582303e-56 | -8.615850e-47 |
| Msa0682680 | Msa0856960 | 0.836263 | 1.036725e-56 | -8.615850e-47 |
| Msa0685090 | Msa0856960 | 0.818540 | 1.858550e-52 | -8.615850e-47 |
| Msa0692830 | Msa0856960 | 0.802535 | 5.358682e-49 | -8.615850e-47 |
| Msa0694620 | Msa0856960 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa0698540 | Msa0856960 | 0.844788 | 6.084156e-59 | -8.615850e-47 |
| Msa0707250 | Msa0856960 | 0.823827 | 1.123248e-53 | -8.615850e-47 |
| Msa0737600 | Msa0856960 | 0.945363 | 3.509573e-104 | -8.615850e-47 |
| Msa0750170 | Msa0856960 | 0.809814 | 1.570634e-50 | -8.615850e-47 |
| Msa0757610 | Msa0856960 | 0.800073 | 1.710175e-48 | -8.615850e-47 |
| Msa0800370 | Msa0856960 | 0.816466 | 5.451769e-52 | -8.615850e-47 |
| Msa0816730 | Msa0856960 | 0.879012 | 1.763718e-69 | -8.615850e-47 |
| Msa0822500 | Msa0856960 | 0.813063 | 3.094522e-51 | -8.615850e-47 |
| Msa0127800 | Msa0856960 | 0.816461 | 5.465221e-52 | -8.615850e-47 |
| Msa0138020 | Msa0856960 | 0.814506 | 1.488237e-51 | -8.615850e-47 |
| Msa0156370 | Msa0856960 | 0.813507 | 2.472214e-51 | -8.615850e-47 |
| Msa0159180 | Msa0856960 | 0.803101 | 4.092655e-49 | -8.615850e-47 |
| Msa0159420 | Msa0856960 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa0167980 | Msa0856960 | 0.818113 | 2.321979e-52 | -8.615850e-47 |
| Msa0170230 | Msa0856960 | 0.808690 | 2.736514e-50 | -8.615850e-47 |
| Msa0183850 | Msa0856960 | 0.850604 | 1.524690e-60 | -8.615850e-47 |
| Msa0184040 | Msa0856960 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0189520 | Msa0856960 | 0.801514 | 8.685890e-49 | -8.615850e-47 |
| Msa0202410 | Msa0856960 | 0.801853 | 7.399850e-49 | -8.615850e-47 |
| Msa0204960 | Msa0856960 | 0.806928 | 6.482637e-50 | -8.615850e-47 |
| Msa0223010 | Msa0856960 | 0.809525 | 1.812697e-50 | -8.615850e-47 |
| Msa0223340 | Msa0856960 | 0.814589 | 1.426521e-51 | -8.615850e-47 |
| Msa0229380 | Msa0856960 | 0.815933 | 7.170356e-52 | -8.615850e-47 |
| Msa0233370 | Msa0856960 | 0.851526 | 8.378241e-61 | -8.615850e-47 |
| Msa0382370 | Msa0856960 | 0.802629 | 5.123212e-49 | -8.615850e-47 |
| Msa0385490 | Msa0856960 | 0.825347 | 4.924952e-54 | -8.615850e-47 |
| Msa0385500 | Msa0856960 | 0.805958 | 1.038153e-49 | -8.615850e-47 |
| Msa0387820 | Msa0856960 | 0.811760 | 5.957807e-51 | -8.615850e-47 |
| Msa0388700 | Msa0856960 | 0.804390 | 2.210667e-49 | -8.615850e-47 |
| Msa0388730 | Msa0856960 | 0.808782 | 2.615451e-50 | -8.615850e-47 |
| Msa0392270 | Msa0856960 | 0.811002 | 8.703663e-51 | -8.615850e-47 |
| Msa0402790 | Msa0856960 | 0.818856 | 1.575520e-52 | -8.615850e-47 |
| Msa0403770 | Msa0856960 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0423450 | Msa0856960 | -0.811037 | 8.551888e-51 | -8.615850e-47 |
| Msa0481810 | Msa0856960 | 0.811726 | 6.060180e-51 | -8.615850e-47 |
| Msa0481970 | Msa0856960 | 0.809492 | 1.842064e-50 | -8.615850e-47 |
| Msa0253200 | Msa0856960 | 0.811609 | 6.426280e-51 | -8.615850e-47 |
| Msa0257490 | Msa0856960 | 0.832861 | 7.422480e-56 | -8.615850e-47 |
| Msa0257500 | Msa0856960 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa0261720 | Msa0856960 | 0.818675 | 1.732119e-52 | -8.615850e-47 |
| Msa0278580 | Msa0856960 | 0.813523 | 2.452017e-51 | -8.615850e-47 |
| Msa0281530 | Msa0856960 | 0.801610 | 8.300552e-49 | -8.615850e-47 |
| Msa0283420 | Msa0856960 | 0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0292030 | Msa0856960 | 0.813210 | 2.872515e-51 | -8.615850e-47 |
| Msa0296790 | Msa0856960 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0296820 | Msa0856960 | 0.808560 | 2.916797e-50 | -8.615850e-47 |
| Msa0296920 | Msa0856960 | 0.809832 | 1.556977e-50 | -8.615850e-47 |
| Msa0298700 | Msa0856960 | 0.806269 | 8.928458e-50 | -8.615850e-47 |
| Msa0305410 | Msa0856960 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0310660 | Msa0856960 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0317960 | Msa0856960 | 0.803979 | 2.691235e-49 | -8.615850e-47 |
| Msa0326480 | Msa0856960 | 0.818548 | 1.851231e-52 | -8.615850e-47 |
| Msa0363790 | Msa0856960 | 0.818686 | 1.721996e-52 | -8.615850e-47 |
| Msa0492890 | Msa0856960 | 0.828997 | 6.584647e-55 | -8.615850e-47 |
| Msa0510840 | Msa0856960 | 0.824602 | 7.386120e-54 | -8.615850e-47 |
| Msa0542290 | Msa0856960 | 0.825974 | 3.497481e-54 | -8.615850e-47 |
| Msa0542560 | Msa0856960 | 0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa0547160 | Msa0856960 | 0.819544 | 1.098654e-52 | -8.615850e-47 |
| Msa0549780 | Msa0856960 | 0.801050 | 1.081034e-48 | -8.615850e-47 |
| Msa0555450 | Msa0856960 | 0.820801 | 5.661841e-53 | -8.615850e-47 |
| Msa0556060 | Msa0856960 | 0.837975 | 3.785132e-57 | -8.615850e-47 |
| Msa0844450 | Msa0856960 | 0.816674 | 4.895217e-52 | -8.615850e-47 |
| Msa0849030 | Msa0856960 | 0.803135 | 4.028204e-49 | -8.615850e-47 |
| Msa0856960 | Msa0887250 | 0.817091 | 3.947287e-52 | -8.615850e-47 |
| Msa0856960 | Msa0890550 | 0.820422 | 6.916816e-53 | -8.615850e-47 |
| Msa0856960 | Msa0892640 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0856960 | Msa0924470 | 0.807429 | 5.076157e-50 | -8.615850e-47 |
| Msa0856960 | Msa0927260 | 0.801749 | 7.774018e-49 | -8.615850e-47 |
| Msa0856960 | Msa0969810 | 0.822112 | 2.819529e-53 | -8.615850e-47 |
| Msa0856960 | Msa0997970 | 0.807564 | 4.752716e-50 | -8.615850e-47 |
| Msa0856960 | Msa1011090 | 0.813836 | 2.092199e-51 | -8.615850e-47 |
| Msa0856960 | Msa1013070 | 0.807224 | 5.612119e-50 | -8.615850e-47 |
| Msa0856960 | Msa1029050 | 0.803445 | 3.473741e-49 | -8.615850e-47 |
| Msa0856960 | Msa1037420 | 0.843870 | 1.073791e-58 | -8.615850e-47 |
| Msa0856960 | Msa1089320 | 0.831842 | 1.326973e-55 | -8.615850e-47 |
| Msa0856960 | Msa1089460 | 0.814760 | 1.307180e-51 | -8.615850e-47 |
| Msa0856960 | Msa1091940 | 0.814949 | 1.186912e-51 | -8.615850e-47 |
| Msa0856960 | Msa1102220 | 0.812784 | 3.561115e-51 | -8.615850e-47 |
| Msa0856960 | Msa1107900 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0856960 | Msa1123810 | 0.828024 | 1.131455e-54 | -8.615850e-47 |
| Msa0856960 | Msa1128270 | 0.802341 | 5.874718e-49 | -8.615850e-47 |
| Msa0856960 | Msa1129550 | 0.806852 | 6.725571e-50 | -8.615850e-47 |
| Msa0856960 | Msa1129730 | 0.809861 | 1.534793e-50 | -8.615850e-47 |
| Msa0856960 | Msa1133230 | 0.825725 | 4.007614e-54 | -8.615850e-47 |
| Msa0856960 | Msa1133250 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
| Msa0856960 | Msa1150710 | 0.804945 | 1.692669e-49 | -8.615850e-47 |
| Msa0856960 | Msa1163630 | 0.820633 | 6.186651e-53 | -8.615850e-47 |
| Msa0856960 | Msa1175200 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0856960 | Msa1180500 | 0.846999 | 1.526231e-59 | -8.615850e-47 |
| Msa0856960 | Msa1181250 | 0.815621 | 8.415398e-52 | -8.615850e-47 |
| Msa0856960 | Msa1181330 | 0.806563 | 7.741642e-50 | -8.615850e-47 |
| Msa0856960 | Msa1190920 | 0.814813 | 1.272399e-51 | -8.615850e-47 |
| Msa0856960 | Msa1190930 | 0.827977 | 1.160889e-54 | -8.615850e-47 |
| Msa0856960 | Msa1204530 | 0.805938 | 1.048331e-49 | -8.615850e-47 |
| Msa0856960 | Msa1204630 | 0.816481 | 5.409457e-52 | -8.615850e-47 |
| Msa0856960 | Msa1206270 | 0.807404 | 5.139623e-50 | -8.615850e-47 |
| Msa0856960 | Msa1206290 | 0.832477 | 9.243194e-56 | -8.615850e-47 |
| Msa0856960 | Msa1210020 | 0.814362 | 1.601182e-51 | -8.615850e-47 |
| Msa0856960 | Msa1211230 | -0.825487 | 4.563586e-54 | -8.615850e-47 |
| Msa0856960 | Msa1211420 | -0.829614 | 4.663696e-55 | -8.615850e-47 |
| Msa0856960 | Msa1231840 | 0.849533 | 3.042901e-60 | -8.615850e-47 |
| Msa0856960 | Msa1232740 | 0.813095 | 3.043962e-51 | -8.615850e-47 |
| Msa0856960 | Msa1254730 | 0.840386 | 8.974395e-58 | -8.615850e-47 |
| Msa0856960 | Msa1271910 | 0.813969 | 1.955501e-51 | -8.615850e-47 |
| Msa0856960 | Msa1274560 | 0.831612 | 1.512523e-55 | -8.615850e-47 |
| Msa0856960 | Msa1277690 | 0.831061 | 2.065789e-55 | -8.615850e-47 |
| Msa0856960 | Msa1294820 | 0.805143 | 1.539086e-49 | -8.615850e-47 |
| Msa0856960 | Msa1298510 | 0.808952 | 2.404620e-50 | -8.615850e-47 |
| Msa0856960 | Msa1299400 | -0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0856960 | Msa1305810 | 0.829776 | 4.260877e-55 | -8.615850e-47 |
| Msa0856960 | Msa1312520 | 0.848108 | 7.560284e-60 | -8.615850e-47 |
| Msa0856960 | Msa1313320 | 0.803923 | 2.764917e-49 | -8.615850e-47 |
| Msa0856960 | Msa1316360 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0856960 | Msa1331050 | -0.826350 | 2.847156e-54 | -8.615850e-47 |
| Msa0856960 | Msa1336560 | 0.820532 | 6.525187e-53 | -8.615850e-47 |
| Msa0856960 | Msa1351540 | 0.815762 | 7.827474e-52 | -8.615850e-47 |
| Msa0856960 | Msa1364210 | 0.832292 | 1.027376e-55 | -8.615850e-47 |
| Msa0856960 | Msa1385770 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
| Msa0856960 | Msa1393570 | 0.813973 | 1.951383e-51 | -8.615850e-47 |
| Msa0856960 | Msa1409240 | 0.807542 | 4.803293e-50 | -8.615850e-47 |
| Msa0856960 | Msa1419870 | 0.800508 | 1.394602e-48 | -8.615850e-47 |
| Msa0856960 | Msa1427230 | 0.824082 | 9.788558e-54 | -8.615850e-47 |
| Msa0856960 | Msa1433390 | 0.801397 | 9.177638e-49 | -8.615850e-47 |
| Msa0856960 | Msa1434140 | 0.805304 | 1.423821e-49 | -8.615850e-47 |
| Msa0856960 | Msa1434420 | -0.854864 | 9.264776e-62 | -8.615850e-47 |
| Msa0856960 | Msa1447890 | 0.812210 | 4.754588e-51 | -8.615850e-47 |
| Msa0856960 | Msa1458090 | 0.805317 | 1.415197e-49 | -8.615850e-47 |
| Msa0856960 | Msa1460830 | 0.823061 | 1.696589e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856960 | MtrunA17_Chr5g0435351 | 95.779 | 616 | 19 | 1 | 1 | 609 | 1 | 616 | 0.0 | 1206 |
| Msa0856960 | MtrunA17_Chr3g0111941 | 53.701 | 635 | 248 | 13 | 1 | 599 | 1 | 625 | 0.0 | 587 |
| Msa0856960 | MtrunA17_Chr2g0328331 | 43.290 | 462 | 225 | 6 | 157 | 588 | 253 | 707 | 1.52e-107 | 340 |
| Msa0856960 | MtrunA17_Chr7g0238741 | 37.048 | 664 | 296 | 19 | 1 | 597 | 1 | 609 | 4.51e-107 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856960 | AT5G13820.2 | 44.548 | 642 | 298 | 14 | 1 | 599 | 1 | 627 | 1.37e-151 | 451 |
| Msa0856960 | AT5G13820.1 | 44.548 | 642 | 298 | 14 | 1 | 599 | 1 | 627 | 1.37e-151 | 451 |
| Msa0856960 | AT3G12560.1 | 42.812 | 640 | 282 | 15 | 1 | 597 | 1 | 599 | 1.22e-140 | 422 |
| Msa0856960 | AT3G12560.2 | 42.812 | 640 | 282 | 15 | 1 | 597 | 1 | 599 | 1.22e-140 | 422 |
| Msa0856960 | AT3G46590.1 | 39.021 | 633 | 270 | 23 | 1 | 605 | 1 | 545 | 3.38e-101 | 318 |
| Msa0856960 | AT3G46590.2 | 38.801 | 634 | 271 | 24 | 1 | 605 | 1 | 546 | 2.47e-100 | 316 |
| Msa0856960 | AT3G46590.3 | 38.801 | 634 | 265 | 24 | 1 | 605 | 1 | 540 | 3.27e-99 | 313 |
| Msa0856960 | AT3G46590.5 | 39.189 | 592 | 244 | 23 | 42 | 605 | 2 | 505 | 5.06e-94 | 298 |
| Msa0856960 | AT5G59430.3 | 36.033 | 605 | 310 | 18 | 10 | 596 | 11 | 556 | 5.98e-83 | 271 |
| Msa0856960 | AT5G59430.2 | 41.809 | 409 | 182 | 10 | 189 | 588 | 188 | 549 | 7.08e-78 | 258 |
| Msa0856960 | AT5G59430.1 | 41.809 | 409 | 182 | 10 | 189 | 588 | 188 | 549 | 7.08e-78 | 258 |
| Msa0856960 | AT5G59430.5 | 41.809 | 409 | 182 | 10 | 189 | 588 | 188 | 549 | 7.08e-78 | 258 |
| Msa0856960 | AT5G59430.4 | 41.809 | 409 | 182 | 10 | 189 | 588 | 187 | 548 | 7.52e-78 | 258 |
| Msa0856960 | AT3G53790.1 | 42.857 | 336 | 128 | 7 | 259 | 588 | 119 | 396 | 9.81e-67 | 223 |
| Msa0856960 | AT3G46590.4 | 34.434 | 424 | 195 | 19 | 1 | 399 | 1 | 366 | 4.97e-41 | 154 |
Find 160 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAACCTGTTTAAATTTA+AGG | 0.068365 | 5_4:-51985476 | None:intergenic |
| TTTCCTCCAATTACTTTCTT+AGG | 0.109494 | 5_4:-51983001 | None:intergenic |
| TGCAACTGTTGCTTCATTAA+AGG | 0.170101 | 5_4:+51983215 | Msa0856960:CDS |
| ATGATGACGAAAACTTTATT+AGG | 0.242004 | 5_4:+51982429 | Msa0856960:CDS |
| GGAGCTATTGGATAGGGTTT+TGG | 0.246722 | 5_4:+51985270 | Msa0856960:CDS |
| AATTACTTTCTTAGGGGAAT+TGG | 0.254177 | 5_4:-51982993 | None:intergenic |
| GGAAACAATTCCCCACAAAA+TGG | 0.254603 | 5_4:-51982353 | None:intergenic |
| TGACAGCATAATGAAGAAAA+AGG | 0.275761 | 5_4:+51985614 | Msa0856960:three_prime_UTR |
| AATTCCCCTAAGAAAGTAAT+TGG | 0.278506 | 5_4:+51982995 | Msa0856960:CDS |
| TTCCTTAACAAATTCTTTGC+TGG | 0.278531 | 5_4:+51985453 | Msa0856960:three_prime_UTR |
| AGAGACTTGGTAATGGATTC+AGG | 0.281628 | 5_4:+51981794 | Msa0856960:CDS |
| GAAGCAACAGTTGCAGTTTC+GGG | 0.282983 | 5_4:-51983207 | None:intergenic |
| TGGCAACTTGTAACTAAATA+AGG | 0.296560 | 5_4:+51985494 | Msa0856960:three_prime_UTR |
| TGCAAAAGTTCGCGTTTCTA+AGG | 0.302423 | 5_4:+51983039 | Msa0856960:CDS |
| TTACTTACTCTTACAGATCT+TGG | 0.307105 | 5_4:-51981847 | None:intergenic |
| TGGTTTGTGTGCAGGATAAA+TGG | 0.309116 | 5_4:+51985185 | Msa0856960:intron |
| TGAAGCAACAGTTGCAGTTT+CGG | 0.311212 | 5_4:-51983208 | None:intergenic |
| AGTTTCGCATCGAGTCATTC+AGG | 0.318139 | 5_4:+51983160 | Msa0856960:CDS |
| TTCAAATTGGAGAATAGGTT+TGG | 0.318263 | 5_4:+51982203 | Msa0856960:CDS |
| CTAACCTATCTCTCTTTGTT+TGG | 0.325015 | 5_4:-51980963 | None:intergenic |
| TCCTCCTTGCTTACAAATAC+TGG | 0.330363 | 5_4:+51984169 | Msa0856960:CDS |
| ACATTGCACGCAAAATAATT+AGG | 0.331937 | 5_4:+51982498 | Msa0856960:CDS |
| CGAAATCGCTCTTCTGTTAA+CGG | 0.335512 | 5_4:-51982074 | None:intergenic |
| GAGGCGGTGATGACTATAAT+AGG | 0.341788 | 5_4:+51983400 | Msa0856960:CDS |
| GGGAGGAATGCTAGTAAGTT+AGG | 0.342627 | 5_4:+51982398 | Msa0856960:CDS |
| AGGGATTTCTGTTGCCAAAC+AGG | 0.342636 | 5_4:+51984144 | Msa0856960:CDS |
| GGAACTCCCTCCATAGATTC+AGG | 0.342756 | 5_4:+51984124 | Msa0856960:CDS |
| TGGAGCAACCTTCCAGTGTT+TGG | 0.343786 | 5_4:-51982540 | None:intergenic |
| TTCCTCCAATTACTTTCTTA+GGG | 0.346950 | 5_4:-51983000 | None:intergenic |
| GCCAGTTCCTCAGGAGCTAT+TGG | 0.348630 | 5_4:+51985258 | Msa0856960:CDS |
| CTTGGACATCTAGGTACCTT+AGG | 0.349158 | 5_4:-51981829 | None:intergenic |
| CTAGATTGCTGTAATGTAAC+TGG | 0.349404 | 5_4:+51985520 | Msa0856960:three_prime_UTR |
| ACGTTGTTGACTTGTAACTA+TGG | 0.354132 | 5_4:+51985389 | Msa0856960:three_prime_UTR |
| TGCTGGCCTTAAATTTAAAC+AGG | 0.360046 | 5_4:+51985470 | Msa0856960:three_prime_UTR |
| GCATGTTGGTGTTCTTGTTA+AGG | 0.368440 | 5_4:+51983432 | Msa0856960:CDS |
| AACCTTCCAGTGTTTGGAAT+TGG | 0.390971 | 5_4:-51982534 | None:intergenic |
| CGCGTTTCTAAGGATTCTAA+TGG | 0.394563 | 5_4:+51983049 | Msa0856960:CDS |
| TCCAATAGCTCCTGAGGAAC+TGG | 0.395946 | 5_4:-51985259 | None:intergenic |
| TTCAGACTTCACATTATTGT+TGG | 0.402330 | 5_4:-51982177 | None:intergenic |
| GCTTCTCCAGTTGTTTGTGC+TGG | 0.408670 | 5_4:+51983559 | Msa0856960:CDS |
| AAGCAAGGAGGAACCCTGTT+TGG | 0.410467 | 5_4:-51984158 | None:intergenic |
| TGTTCACAATCTTTCAACTT+TGG | 0.411776 | 5_4:-51982560 | None:intergenic |
| AACAGAAATCCCTGAATCTA+TGG | 0.411949 | 5_4:-51984134 | None:intergenic |
| GGATCACCAGCACAAACAAC+TGG | 0.414617 | 5_4:-51983565 | None:intergenic |
| CATGTTGGTGTTCTTGTTAA+GGG | 0.416802 | 5_4:+51983433 | Msa0856960:CDS |
| GGAACGTCGACGTAAAGTTC+TGG | 0.420090 | 5_4:-51983186 | None:intergenic |
| GCTTGACATGCTGCTTGGAT+TGG | 0.423506 | 5_4:-51985318 | None:intergenic |
| TGACATGCTGCTTGGATTGG+TGG | 0.426360 | 5_4:-51985315 | None:intergenic |
| GAAACAATTCCCCACAAAAT+GGG | 0.429990 | 5_4:-51982352 | None:intergenic |
| CATCACGAGGCTGACAGTTC+AGG | 0.432205 | 5_4:+51982266 | Msa0856960:CDS |
| TAATGGATTCAGGGACTATC+AGG | 0.432252 | 5_4:+51981804 | Msa0856960:CDS |
| GAGAGGACAGCCAGTTCCTC+AGG | 0.432830 | 5_4:+51985249 | Msa0856960:CDS |
| TCAACCAAACAAAGAGAGAT+AGG | 0.434280 | 5_4:+51980959 | Msa0856960:five_prime_UTR |
| TTGATGCTTGACATGCTGCT+TGG | 0.441541 | 5_4:-51985323 | None:intergenic |
| GGCCTTAAATTTAAACAGGT+TGG | 0.445616 | 5_4:+51985474 | Msa0856960:three_prime_UTR |
| GATAAACTAACACAAGATTC+CGG | 0.452961 | 5_4:+51984250 | Msa0856960:CDS |
| CTTACAGATCTTGGACATCT+AGG | 0.453561 | 5_4:-51981838 | None:intergenic |
| GTTCATGCAGTTGAGGAAGT+TGG | 0.454012 | 5_4:+51984406 | Msa0856960:CDS |
| CAAGGGAAGAAGCTGATTCA+TGG | 0.454467 | 5_4:-51984213 | None:intergenic |
| TTCCTTGAAAAGGAAGCATT+GGG | 0.461169 | 5_4:-51982374 | None:intergenic |
| TCCTCAGGAGCTATTGGATA+GGG | 0.470302 | 5_4:+51985264 | Msa0856960:CDS |
| ATTCCTCCCATTCCTTGAAA+AGG | 0.474110 | 5_4:-51982384 | None:intergenic |
| TAGGACTTATGTAGACTTGA+AGG | 0.479281 | 5_4:+51984554 | Msa0856960:CDS |
| GGCTGTCCTCTCCTTTGTTG+AGG | 0.480024 | 5_4:-51985238 | None:intergenic |
| ATTCCTTGAAAAGGAAGCAT+TGG | 0.481452 | 5_4:-51982375 | None:intergenic |
| TTGGATTTGTCTAGGTCTCT+AGG | 0.484229 | 5_4:+51984103 | Msa0856960:intron |
| GCAGTTGAGGAAGTTGGAAC+TGG | 0.488859 | 5_4:+51984412 | Msa0856960:CDS |
| AGAGGAAGAAATTATCAGAC+AGG | 0.491022 | 5_4:+51982924 | Msa0856960:CDS |
| GAACTACTTGCATCTTTAGC+CGG | 0.491484 | 5_4:+51981996 | Msa0856960:CDS |
| GAGAAACATCTTGAGAGTGC+TGG | 0.500393 | 5_4:+51982125 | Msa0856960:CDS |
| GGCCAGCAAAGAATTTGTTA+AGG | 0.501742 | 5_4:-51985455 | None:intergenic |
| CGTGAAGGTCTAAAAGCCTT+CGG | 0.501813 | 5_4:-51982473 | None:intergenic |
| TGGTCCAGTGTTCTGATTCA+CGG | 0.506571 | 5_4:-51984323 | None:intergenic |
| AGCAAAGAATTTGTTAAGGA+AGG | 0.506841 | 5_4:-51985451 | None:intergenic |
| AGACACAGAAAACGGTCTCC+TGG | 0.507296 | 5_4:-51984368 | None:intergenic |
| ACAGAAGAGCGATTTCGTAA+TGG | 0.507986 | 5_4:+51982080 | Msa0856960:CDS |
| AGCTTGTACAGCGTCGAACC+AGG | 0.512219 | 5_4:+51984350 | Msa0856960:CDS |
| AACAGAACTCTTCGTCAGAC+TGG | 0.514395 | 5_4:+51983475 | Msa0856960:CDS |
| CCGCTCAAGTTGGCTAAAGA+AGG | 0.515374 | 5_4:-51982317 | None:intergenic |
| CAAGAGTGGCCATCCTCGAC+TGG | 0.517246 | 5_4:-51981966 | None:intergenic |
| TGCGACCCTCGAGTCATAAG+AGG | 0.517455 | 5_4:+51982855 | Msa0856960:CDS |
| TTGAAGAAGAGACTTGGTAA+TGG | 0.519239 | 5_4:+51981787 | Msa0856960:CDS |
| AGAAACATCTTGAGAGTGCT+GGG | 0.523924 | 5_4:+51982126 | Msa0856960:CDS |
| GAACTCCCTCCATAGATTCA+GGG | 0.526972 | 5_4:+51984125 | Msa0856960:CDS |
| GAGACTTGGTAATGGATTCA+GGG | 0.529036 | 5_4:+51981795 | Msa0856960:CDS |
| GATTGTGAACATTCTCGCTA+TGG | 0.532088 | 5_4:+51982572 | Msa0856960:CDS |
| CACAAGTGGTTGGACAACAT+TGG | 0.539637 | 5_4:-51985347 | None:intergenic |
| TCAAGTCTACATAAGTCCTA+TGG | 0.543438 | 5_4:-51984551 | None:intergenic |
| GGTCCAGTGTTCTGATTCAC+GGG | 0.543575 | 5_4:-51984322 | None:intergenic |
| AATGCCTCAGTACTATGAGC+TGG | 0.546437 | 5_4:-51984289 | None:intergenic |
| TCAACTTCAGACACAGAAAA+CGG | 0.547786 | 5_4:-51984376 | None:intergenic |
| AGGTCTAAAAGCCTTCGGTT+TGG | 0.548415 | 5_4:-51982468 | None:intergenic |
| GGGATTTCTGTTGCCAAACA+GGG | 0.550679 | 5_4:+51984145 | Msa0856960:CDS |
| TTGGACATCTAGGTACCTTA+GGG | 0.553309 | 5_4:-51981828 | None:intergenic |
| AGATAAACTCGGTTTCGTGT+TGG | 0.553459 | 5_4:+51983519 | Msa0856960:CDS |
| ATGTAGCATCTCAGCCTACC+AGG | 0.553875 | 5_4:+51983596 | Msa0856960:CDS |
| AGTGTCACACTCTGTTGAAG+AGG | 0.554973 | 5_4:+51982906 | Msa0856960:CDS |
| TCTACATAATCACAAGTGGT+TGG | 0.557057 | 5_4:-51985357 | None:intergenic |
| TTTAATGTTACCGCTCAAGT+TGG | 0.557954 | 5_4:-51982327 | None:intergenic |
| AGCACTTGTTCATGCAGTTG+AGG | 0.558933 | 5_4:+51984399 | Msa0856960:CDS |
| TTCCAATTCCAAACACTGGA+AGG | 0.567244 | 5_4:+51982532 | Msa0856960:CDS |
| ACTCTCCTTCAGCAACTCAC+CGG | 0.568548 | 5_4:-51982015 | None:intergenic |
| TGGAACAGAAACTAGCGCTC+CGG | 0.569116 | 5_4:-51984269 | None:intergenic |
| GGTTCGACGCTGTACAAGCT+CGG | 0.569476 | 5_4:-51984347 | None:intergenic |
| TTTAGCCGGTGAGTTGCTGA+AGG | 0.574743 | 5_4:+51982010 | Msa0856960:CDS |
| CAGGGACTATCAGGTCCCTA+AGG | 0.575068 | 5_4:+51981813 | Msa0856960:CDS |
| ACCGCCAGTATTTGTAAGCA+AGG | 0.577016 | 5_4:-51984173 | None:intergenic |
| TCCCCTAAGAAAGTAATTGG+AGG | 0.577061 | 5_4:+51982998 | Msa0856960:CDS |
| GCAAAATAATTAGGAAGCGG+TGG | 0.577586 | 5_4:+51982507 | Msa0856960:CDS |
| GTCTTCCTCTTATGACTCGA+GGG | 0.577638 | 5_4:-51982860 | None:intergenic |
| AGTCTTCCTCTTATGACTCG+AGG | 0.577787 | 5_4:-51982861 | None:intergenic |
| AGTGATAAATGTTCATGCTA+TGG | 0.579354 | 5_4:+51981762 | Msa0856960:exon |
| TCAACTTTCGCTCACCTGGT+AGG | 0.580846 | 5_4:-51983610 | None:intergenic |
| CACGCAAAATAATTAGGAAG+CGG | 0.581824 | 5_4:+51982504 | Msa0856960:CDS |
| GTGATGACTATAATAGGAGG+TGG | 0.582455 | 5_4:+51983406 | Msa0856960:CDS |
| GGAGAAGCTTGAGAAGAGCT+AGG | 0.582931 | 5_4:-51983544 | None:intergenic |
| CGACGCTGTACAAGCTCGGA+TGG | 0.583494 | 5_4:-51984343 | None:intergenic |
| TCCTCCAATTACTTTCTTAG+GGG | 0.586162 | 5_4:-51982999 | None:intergenic |
| TGAGATGCTACATGGTGAGA+AGG | 0.589368 | 5_4:-51983586 | None:intergenic |
| TTCAAGAAACCAGTCGAGGA+TGG | 0.590011 | 5_4:+51981957 | Msa0856960:CDS |
| ATCAGATGCATTGCTAGAGG+TGG | 0.590241 | 5_4:-51982045 | None:intergenic |
| ATCTCTCCTCAACAAAGGAG+AGG | 0.592039 | 5_4:+51985232 | Msa0856960:CDS |
| CAAAGTTTGCACCAAACCGA+AGG | 0.594191 | 5_4:+51982457 | Msa0856960:CDS |
| TTCCTCAGGAGCTATTGGAT+AGG | 0.595354 | 5_4:+51985263 | Msa0856960:CDS |
| TATCAGATATAGTGTCAGCA+AGG | 0.595686 | 5_4:-51984231 | None:intergenic |
| TTTATAGAGGACAGTTATGG+AGG | 0.597438 | 5_4:+51983381 | Msa0856960:intron |
| AGAAATCCCTGAATCTATGG+AGG | 0.598839 | 5_4:-51984131 | None:intergenic |
| AACATCAGATGCATTGCTAG+AGG | 0.601082 | 5_4:-51982048 | None:intergenic |
| CTGAACTGTCAGCCTCGTGA+TGG | 0.601669 | 5_4:-51982265 | None:intergenic |
| GAGGAAGAAATTATCAGACA+GGG | 0.603590 | 5_4:+51982925 | Msa0856960:CDS |
| TTGAGGAAGTTGGAACTGGA+AGG | 0.604280 | 5_4:+51984416 | Msa0856960:CDS |
| AAACAATTCCCCACAAAATG+GGG | 0.608737 | 5_4:-51982351 | None:intergenic |
| GGACTTCCAATTCCAAACAC+TGG | 0.611770 | 5_4:+51982528 | Msa0856960:CDS |
| ATAGAGGACAGTTATGGAGG+CGG | 0.617071 | 5_4:+51983384 | Msa0856960:intron |
| ACCCTATCCAATAGCTCCTG+AGG | 0.621261 | 5_4:-51985265 | None:intergenic |
| TCGATGCTAACTCATGGTGG+AGG | 0.623580 | 5_4:+51982950 | Msa0856960:CDS |
| TCTTTCTACATAATCACAAG+TGG | 0.623634 | 5_4:-51985361 | None:intergenic |
| TTGCGTGCAATGTATCGTGA+AGG | 0.623664 | 5_4:-51982488 | None:intergenic |
| TGGTAGGCTGAGATGCTACA+TGG | 0.626444 | 5_4:-51983594 | None:intergenic |
| CCTTCTTTAGCCAACTTGAG+CGG | 0.626589 | 5_4:+51982317 | Msa0856960:CDS |
| ATGTTGGTGTTCTTGTTAAG+GGG | 0.626831 | 5_4:+51983434 | Msa0856960:CDS |
| AGGGGTTCGATGCTAACTCA+TGG | 0.630655 | 5_4:+51982944 | Msa0856960:CDS |
| GTAGTTCAAAAGCACAAGAG+TGG | 0.631884 | 5_4:-51981980 | None:intergenic |
| ATCAGATATAGTGTCAGCAA+GGG | 0.636117 | 5_4:-51984230 | None:intergenic |
| TATCCAACTGAAGAAAAGCA+AGG | 0.636708 | 5_4:-51985647 | None:intergenic |
| AAAGAAAATATAGATAAACT+CGG | 0.652207 | 5_4:+51983508 | Msa0856960:CDS |
| TCCTTGCTTACAAATACTGG+CGG | 0.652781 | 5_4:+51984172 | Msa0856960:CDS |
| GTTCCCGTGAATCAGAACAC+TGG | 0.655650 | 5_4:+51984319 | Msa0856960:CDS |
| GAAATCCCTGAATCTATGGA+GGG | 0.665973 | 5_4:-51984130 | None:intergenic |
| ATAGGAGGTGGAGTGCATGT+TGG | 0.667170 | 5_4:+51983418 | Msa0856960:CDS |
| GCGGTGATGACTATAATAGG+AGG | 0.667399 | 5_4:+51983403 | Msa0856960:CDS |
| TGTTCCAGCTCATAGTACTG+AGG | 0.671950 | 5_4:+51984285 | Msa0856960:CDS |
| TGCGTTCAAGAAACCAGTCG+AGG | 0.672753 | 5_4:+51981953 | Msa0856960:CDS |
| ATTCATGGTTCATGTCAACA+AGG | 0.686818 | 5_4:-51984198 | None:intergenic |
| ATGGTGTTGAAGAAGAGACT+TGG | 0.697633 | 5_4:+51981781 | Msa0856960:CDS |
| AGGAAGAAATTATCAGACAG+GGG | 0.702812 | 5_4:+51982926 | Msa0856960:CDS |
| GGTTCGATGCTAACTCATGG+TGG | 0.706099 | 5_4:+51982947 | Msa0856960:CDS |
| GTAATTGGAGGAAATAACCG+TGG | 0.709826 | 5_4:+51983010 | Msa0856960:CDS |
| GCCAGTATTTGTAAGCAAGG+AGG | 0.726150 | 5_4:-51984170 | None:intergenic |
| AGAAGTTTCAAACCATCACG+AGG | 0.743753 | 5_4:+51982253 | Msa0856960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAACAATACAAAAT+GGG | - | chr5_4:51981037-51981056 | None:intergenic | 10.0% |
| !! | ATAAAAAAAACAATACAAAA+TGG | - | chr5_4:51981038-51981057 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTTATTTTTTTC+TGG | + | chr5_4:51981154-51981173 | Msa0856960:intron | 10.0% |
| !!! | TTTGATTTTTATTTTTTTCT+GGG | + | chr5_4:51981155-51981174 | Msa0856960:intron | 10.0% |
| !!! | TTGATTTTTATTTTTTTCTG+GGG | + | chr5_4:51981156-51981175 | Msa0856960:intron | 15.0% |
| !! | TATTATCGAAAAAAATTATG+TGG | + | chr5_4:51981633-51981652 | Msa0856960:intron | 15.0% |
| !! | AAAAAAAAAGGAAAAAACTT+GGG | - | chr5_4:51982799-51982818 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGGAAAAAACT+TGG | - | chr5_4:51982800-51982819 | None:intergenic | 15.0% |
| !!! | TCTTTTCAGTTAAAAAAAAA+AGG | - | chr5_4:51982811-51982830 | None:intergenic | 15.0% |
| !!! | TATTGTTAACTTTTTTATAG+AGG | + | chr5_4:51983368-51983387 | Msa0856960:intron | 15.0% |
| !! | AAAGAAAATATAGATAAACT+CGG | + | chr5_4:51983508-51983527 | Msa0856960:CDS | 15.0% |
| !! | ATAAGAATTATTCAATTGAA+TGG | - | chr5_4:51984062-51984081 | None:intergenic | 15.0% |
| !! | AAAAATGCAAAAGAAATCTA+TGG | - | chr5_4:51980861-51980880 | None:intergenic | 20.0% |
| !! | ATTTGCAAGAAAAAACATTT+GGG | - | chr5_4:51980919-51980938 | None:intergenic | 20.0% |
| !! | AATTTGCAAGAAAAAACATT+TGG | - | chr5_4:51980920-51980939 | None:intergenic | 20.0% |
| !!! | GTTAGTTTCATGTTATTTTA+AGG | + | chr5_4:51980981-51981000 | Msa0856960:intron | 20.0% |
| !!! | CAAAAGTACAAAGAATTATA+AGG | - | chr5_4:51981369-51981388 | None:intergenic | 20.0% |
| !! | AAAAAAATTATGTGGATGAT+TGG | + | chr5_4:51981641-51981660 | Msa0856960:intron | 20.0% |
| !!! | AAATTTTCAAATTGGAGAAT+AGG | + | chr5_4:51982198-51982217 | Msa0856960:CDS | 20.0% |
| !!! | AATGTGTAATTTGTAGATAA+TGG | + | chr5_4:51982830-51982849 | Msa0856960:intron | 20.0% |
| !!! | ATTTAGTTTCATCAATAGTT+TGG | + | chr5_4:51983304-51983323 | Msa0856960:intron | 20.0% |
| !! | ATCTTATAAGTGTTTATGTT+TGG | + | chr5_4:51983701-51983720 | Msa0856960:intron | 20.0% |
| !! | ATAGCTTATATTAAAACAGT+TGG | - | chr5_4:51983819-51983838 | None:intergenic | 20.0% |
| !!! | CTTTATCTAATTTTTGCAAT+TGG | + | chr5_4:51984084-51984103 | Msa0856960:intron | 20.0% |
| !! | AGAATTAAGATATGATAGAA+GGG | - | chr5_4:51984584-51984603 | None:intergenic | 20.0% |
| !! | AAGAATTAAGATATGATAGA+AGG | - | chr5_4:51984585-51984604 | None:intergenic | 20.0% |
| !! | TAAATTTAAAGAGAAAGATG+AGG | + | chr5_4:51984635-51984654 | Msa0856960:intron | 20.0% |
| !!! | TCTTAGTTTTAAGTTAGATT+TGG | - | chr5_4:51984831-51984850 | None:intergenic | 20.0% |
| !! | GTGAAAGAACAATAAATTTA+AGG | - | chr5_4:51984887-51984906 | None:intergenic | 20.0% |
| !! | TCAAAATAAGGAAAATGTTA+TGG | - | chr5_4:51984928-51984947 | None:intergenic | 20.0% |
| !! | TTAATCATAAATATCAGACT+CGG | + | chr5_4:51985068-51985087 | Msa0856960:intron | 20.0% |
| ! | AACTTGAAACAGAGAAAAAA+AGG | + | chr5_4:51980818-51980837 | Msa0856960:five_prime_UTR | 25.0% |
| !! | ACAGAGAAAAAAAGGATTTT+TGG | + | chr5_4:51980826-51980845 | Msa0856960:five_prime_UTR | 25.0% |
| !! | CAGAGAAAAAAAGGATTTTT+GGG | + | chr5_4:51980827-51980846 | Msa0856960:five_prime_UTR | 25.0% |
| !!! | TCATGTTATTTTAAGGATTC+TGG | + | chr5_4:51980988-51981007 | Msa0856960:intron | 25.0% |
| !!! | TTAATTTGCCTTGAAATTCA+AGG | + | chr5_4:51981210-51981229 | Msa0856960:intron | 25.0% |
| !! | TAATTTGCCTTGAAATTCAA+GGG | + | chr5_4:51981211-51981230 | Msa0856960:intron | 25.0% |
| ! | ATCTTAGCAAATAGAGAAAT+CGG | - | chr5_4:51981567-51981586 | None:intergenic | 25.0% |
| !!! | TTCTCTATTTGCTAAGATTT+TGG | + | chr5_4:51981569-51981588 | Msa0856960:intron | 25.0% |
| !! | TTTTTATGACAGAGATAGAT+AGG | + | chr5_4:51981706-51981725 | Msa0856960:intron | 25.0% |
| ! | AAAATCAATTGCAAGAATTG+CGG | - | chr5_4:51981876-51981895 | None:intergenic | 25.0% |
| !!! | GATTTTTACCTGTTTTTGTT+TGG | + | chr5_4:51981890-51981909 | Msa0856960:intron | 25.0% |
| !!! | GAAGTCTGAAATTTTCAAAT+TGG | + | chr5_4:51982190-51982209 | Msa0856960:CDS | 25.0% |
| !! | ATGATGACGAAAACTTTATT+AGG | + | chr5_4:51982429-51982448 | Msa0856960:CDS | 25.0% |
| ! | AAAATTGTCACCAACTAAAA+GGG | - | chr5_4:51982752-51982771 | None:intergenic | 25.0% |
| ! | TAAAATTGTCACCAACTAAA+AGG | - | chr5_4:51982753-51982772 | None:intergenic | 25.0% |
| ! | TCTAATGGTAATTTATTGCA+TGG | + | chr5_4:51983064-51983083 | Msa0856960:intron | 25.0% |
| !! | TTAAAGGTATGATGATTGAA+TGG | + | chr5_4:51983231-51983250 | Msa0856960:intron | 25.0% |
| !!! | TTTTTTATAGAGGACAGTTA+TGG | + | chr5_4:51983378-51983397 | Msa0856960:intron | 25.0% |
| !!! | GTTGTTTTTATAAGCTATCA+TGG | + | chr5_4:51983841-51983860 | Msa0856960:intron | 25.0% |
| ! | ACTTAGTTTATTGCCATTAA+AGG | - | chr5_4:51983985-51984004 | None:intergenic | 25.0% |
| ! | TTTAATGGCAATAAACTAAG+TGG | + | chr5_4:51983984-51984003 | Msa0856960:intron | 25.0% |
| ! | ATCCTGAAGAAATTTGATTA+CGG | + | chr5_4:51984029-51984048 | Msa0856960:intron | 25.0% |
| !!! | GACATTTTTTTAAACTATGC+AGG | + | chr5_4:51984490-51984509 | Msa0856960:intron | 25.0% |
| !!! | ATTTTTTTAAACTATGCAGG+TGG | + | chr5_4:51984493-51984512 | Msa0856960:intron | 25.0% |
| !!! | TAGAATTATGCAGTTGTTTT+TGG | + | chr5_4:51985012-51985031 | Msa0856960:intron | 25.0% |
| ATTCCAAATCTTTCCATCAT+GGG | - | chr5_4:51981072-51981091 | None:intergenic | 30.0% | |
| AATTCCAAATCTTTCCATCA+TGG | - | chr5_4:51981073-51981092 | None:intergenic | 30.0% | |
| !!! | CATTATGTACTGATTTTGGA+TGG | + | chr5_4:51981473-51981492 | Msa0856960:intron | 30.0% |
| TCAAGTCGATTATCACAAAT+TGG | - | chr5_4:51981671-51981690 | None:intergenic | 30.0% | |
| AGTGATAAATGTTCATGCTA+TGG | + | chr5_4:51981762-51981781 | Msa0856960:exon | 30.0% | |
| TTACTTACTCTTACAGATCT+TGG | - | chr5_4:51981850-51981869 | None:intergenic | 30.0% | |
| !!! | TTTACCTGTTTTTGTTTGGA+TGG | + | chr5_4:51981894-51981913 | Msa0856960:intron | 30.0% |
| ! | TTGAGTTTGAAATTCTTCAG+AGG | + | chr5_4:51981925-51981944 | Msa0856960:intron | 30.0% |
| TTCAGACTTCACATTATTGT+TGG | - | chr5_4:51982180-51982199 | None:intergenic | 30.0% | |
| TTCAAATTGGAGAATAGGTT+TGG | + | chr5_4:51982203-51982222 | Msa0856960:CDS | 30.0% | |
| ! | AACATTAAATCCCCATTTTG+TGG | + | chr5_4:51982341-51982360 | Msa0856960:CDS | 30.0% |
| ! | ACATTAAATCCCCATTTTGT+GGG | + | chr5_4:51982342-51982361 | Msa0856960:CDS | 30.0% |
| ACATTGCACGCAAAATAATT+AGG | + | chr5_4:51982498-51982517 | Msa0856960:CDS | 30.0% | |
| TGTTCACAATCTTTCAACTT+TGG | - | chr5_4:51982563-51982582 | None:intergenic | 30.0% | |
| CACATATATGTCTATGAGTT+AGG | + | chr5_4:51982641-51982660 | Msa0856960:intron | 30.0% | |
| AATTACTTTCTTAGGGGAAT+TGG | - | chr5_4:51982996-51983015 | None:intergenic | 30.0% | |
| AATTCCCCTAAGAAAGTAAT+TGG | + | chr5_4:51982995-51983014 | Msa0856960:CDS | 30.0% | |
| TTCCTCCAATTACTTTCTTA+GGG | - | chr5_4:51983003-51983022 | None:intergenic | 30.0% | |
| TTTCCTCCAATTACTTTCTT+AGG | - | chr5_4:51983004-51983023 | None:intergenic | 30.0% | |
| TAGTTTCATCAATAGTTTGG+AGG | + | chr5_4:51983307-51983326 | Msa0856960:intron | 30.0% | |
| AGTTTCATCAATAGTTTGGA+GGG | + | chr5_4:51983308-51983327 | Msa0856960:intron | 30.0% | |
| CTAGTACATGAACTCAAATA+AGG | + | chr5_4:51983946-51983965 | Msa0856960:intron | 30.0% | |
| AACCGTAATCAAATTTCTTC+AGG | - | chr5_4:51984034-51984053 | None:intergenic | 30.0% | |
| ! | TTTTGCAATTGGATTTGTCT+AGG | + | chr5_4:51984095-51984114 | Msa0856960:intron | 30.0% |
| GATAAACTAACACAAGATTC+CGG | + | chr5_4:51984250-51984269 | Msa0856960:CDS | 30.0% | |
| ! | TAACACCTATAATGGAAAAG+TGG | + | chr5_4:51984658-51984677 | Msa0856960:intron | 30.0% |
| !! | TTGTACCACTTTTCCATTAT+AGG | - | chr5_4:51984666-51984685 | None:intergenic | 30.0% |
| GATCATTATTTGACATGCTT+AGG | + | chr5_4:51984778-51984797 | Msa0856960:intron | 30.0% | |
| ATGCAACTACGATCAAAATA+AGG | - | chr5_4:51984940-51984959 | None:intergenic | 30.0% | |
| ! | TTCCTAATGACTTGAACTTT+TGG | + | chr5_4:51985165-51985184 | Msa0856960:intron | 30.0% |
| AACCAAAAGTTCAAGTCATT+AGG | - | chr5_4:51985170-51985189 | None:intergenic | 30.0% | |
| TCTTTCTACATAATCACAAG+TGG | - | chr5_4:51985364-51985383 | None:intergenic | 30.0% | |
| !! | AGCAAAGAATTTGTTAAGGA+AGG | - | chr5_4:51985454-51985473 | None:intergenic | 30.0% |
| TTCCTTAACAAATTCTTTGC+TGG | + | chr5_4:51985453-51985472 | Msa0856960:three_prime_UTR | 30.0% | |
| TGCCAACCTGTTTAAATTTA+AGG | - | chr5_4:51985479-51985498 | None:intergenic | 30.0% | |
| TGGCAACTTGTAACTAAATA+AGG | + | chr5_4:51985494-51985513 | Msa0856960:three_prime_UTR | 30.0% | |
| TGACAGCATAATGAAGAAAA+AGG | + | chr5_4:51985614-51985633 | Msa0856960:three_prime_UTR | 30.0% | |
| GCAAGAAAAAACATTTGGGA+TGG | - | chr5_4:51980915-51980934 | None:intergenic | 35.0% | |
| TCAACCAAACAAAGAGAGAT+AGG | + | chr5_4:51980959-51980978 | Msa0856960:five_prime_UTR | 35.0% | |
| CTAACCTATCTCTCTTTGTT+TGG | - | chr5_4:51980966-51980985 | None:intergenic | 35.0% | |
| ! | GGATTCTGGATTCTCAATTT+TGG | + | chr5_4:51981002-51981021 | Msa0856960:intron | 35.0% |
| !!! | GGCTATGTTTGTTTTGAAAC+TGG | + | chr5_4:51981115-51981134 | Msa0856960:intron | 35.0% |
| CACTAAACCCTTGAATTTCA+AGG | - | chr5_4:51981221-51981240 | None:intergenic | 35.0% | |
| !!! | GGCTCATTATGTACTGATTT+TGG | + | chr5_4:51981469-51981488 | Msa0856960:intron | 35.0% |
| ! | ACAGGTTGAGATGAATTACA+AGG | - | chr5_4:51981513-51981532 | None:intergenic | 35.0% |
| AATTCATCTCAACCTGTGTT+AGG | + | chr5_4:51981516-51981535 | Msa0856960:intron | 35.0% | |
| ! | TTGAAGAAGAGACTTGGTAA+TGG | + | chr5_4:51981787-51981806 | Msa0856960:CDS | 35.0% |
| AACACCATCCAAACAAAAAC+AGG | - | chr5_4:51981901-51981920 | None:intergenic | 35.0% | |
| ! | GTTTGAAATTCTTCAGAGGA+CGG | + | chr5_4:51981929-51981948 | Msa0856960:intron | 35.0% |
| TTTAATGTTACCGCTCAAGT+TGG | - | chr5_4:51982330-51982349 | None:intergenic | 35.0% | |
| ! | CATTAAATCCCCATTTTGTG+GGG | + | chr5_4:51982343-51982362 | Msa0856960:CDS | 35.0% |
| AAACAATTCCCCACAAAATG+GGG | - | chr5_4:51982354-51982373 | None:intergenic | 35.0% | |
| GAAACAATTCCCCACAAAAT+GGG | - | chr5_4:51982355-51982374 | None:intergenic | 35.0% | |
| !! | TTCCTTGAAAAGGAAGCATT+GGG | - | chr5_4:51982377-51982396 | None:intergenic | 35.0% |
| ! | ATTCCTTGAAAAGGAAGCAT+TGG | - | chr5_4:51982378-51982397 | None:intergenic | 35.0% |
| !! | AATGCTTCCTTTTCAAGGAA+TGG | + | chr5_4:51982377-51982396 | Msa0856960:CDS | 35.0% |
| !! | ATGCTTCCTTTTCAAGGAAT+GGG | + | chr5_4:51982378-51982397 | Msa0856960:CDS | 35.0% |
| CACGCAAAATAATTAGGAAG+CGG | + | chr5_4:51982504-51982523 | Msa0856960:CDS | 35.0% | |
| !!! | GAGTTAGGCTGTTCTTTTTT+TGG | + | chr5_4:51982656-51982675 | Msa0856960:intron | 35.0% |
| ! | TTTCTTTGCACCCTTTTAGT+TGG | + | chr5_4:51982739-51982758 | Msa0856960:intron | 35.0% |
| AGAGGAAGAAATTATCAGAC+AGG | + | chr5_4:51982924-51982943 | Msa0856960:CDS | 35.0% | |
| GAGGAAGAAATTATCAGACA+GGG | + | chr5_4:51982925-51982944 | Msa0856960:CDS | 35.0% | |
| AGGAAGAAATTATCAGACAG+GGG | + | chr5_4:51982926-51982945 | Msa0856960:CDS | 35.0% | |
| TCCTCCAATTACTTTCTTAG+GGG | - | chr5_4:51983002-51983021 | None:intergenic | 35.0% | |
| !! | TGCATGGAGTTCATTAGTTT+TGG | + | chr5_4:51983080-51983099 | Msa0856960:intron | 35.0% |
| ATATGTTCTTTGCATCCTAC+TGG | + | chr5_4:51983108-51983127 | Msa0856960:intron | 35.0% | |
| ! | TGCAACTGTTGCTTCATTAA+AGG | + | chr5_4:51983215-51983234 | Msa0856960:CDS | 35.0% |
| GTTTCATCAATAGTTTGGAG+GGG | + | chr5_4:51983309-51983328 | Msa0856960:intron | 35.0% | |
| TTTATAGAGGACAGTTATGG+AGG | + | chr5_4:51983381-51983400 | Msa0856960:intron | 35.0% | |
| ! | CATGTTGGTGTTCTTGTTAA+GGG | + | chr5_4:51983433-51983452 | Msa0856960:CDS | 35.0% |
| ! | ATGTTGGTGTTCTTGTTAAG+GGG | + | chr5_4:51983434-51983453 | Msa0856960:CDS | 35.0% |
| CTTGTTAAGGGGAAAAAAGT+TGG | + | chr5_4:51983445-51983464 | Msa0856960:CDS | 35.0% | |
| TCAAATAAGGCAATTCGAAC+AGG | + | chr5_4:51983959-51983978 | Msa0856960:intron | 35.0% | |
| AACAGAAATCCCTGAATCTA+TGG | - | chr5_4:51984137-51984156 | None:intergenic | 35.0% | |
| ATTCATGGTTCATGTCAACA+AGG | - | chr5_4:51984201-51984220 | None:intergenic | 35.0% | |
| ATCAGATATAGTGTCAGCAA+GGG | - | chr5_4:51984233-51984252 | None:intergenic | 35.0% | |
| TATCAGATATAGTGTCAGCA+AGG | - | chr5_4:51984234-51984253 | None:intergenic | 35.0% | |
| TCAACTTCAGACACAGAAAA+CGG | - | chr5_4:51984379-51984398 | None:intergenic | 35.0% | |
| TCAAGTCTACATAAGTCCTA+TGG | - | chr5_4:51984554-51984573 | None:intergenic | 35.0% | |
| TAGGACTTATGTAGACTTGA+AGG | + | chr5_4:51984554-51984573 | Msa0856960:CDS | 35.0% | |
| AGATGAGGTAACACCTATAA+TGG | + | chr5_4:51984650-51984669 | Msa0856960:intron | 35.0% | |
| TGGTACAATATTGCCTTTAG+AGG | + | chr5_4:51984678-51984697 | Msa0856960:intron | 35.0% | |
| !! | ATTGCCTTTAGAGGTTTTGA+CGG | + | chr5_4:51984687-51984706 | Msa0856960:intron | 35.0% |
| !!! | TGACGGGACATTTTAGTTTA+AGG | + | chr5_4:51984704-51984723 | Msa0856960:intron | 35.0% |
| !!! | GGGACATTTTAGTTTAAGGT+TGG | + | chr5_4:51984708-51984727 | Msa0856960:intron | 35.0% |
| !! | GTTGGATTCACTTTTGTTAC+AGG | + | chr5_4:51984726-51984745 | Msa0856960:intron | 35.0% |
| CCATTACAACGTATAGCTAA+TGG | - | chr5_4:51985132-51985151 | None:intergenic | 35.0% | |
| CCATTAGCTATACGTTGTAA+TGG | + | chr5_4:51985129-51985148 | Msa0856960:intron | 35.0% | |
| CAAAAATCTCTCCTCAACAA+AGG | + | chr5_4:51985227-51985246 | Msa0856960:CDS | 35.0% | |
| TCTACATAATCACAAGTGGT+TGG | - | chr5_4:51985360-51985379 | None:intergenic | 35.0% | |
| !! | ACGTTGTTGACTTGTAACTA+TGG | + | chr5_4:51985389-51985408 | Msa0856960:three_prime_UTR | 35.0% |
| !! | TGCTGGCCTTAAATTTAAAC+AGG | + | chr5_4:51985470-51985489 | Msa0856960:three_prime_UTR | 35.0% |
| GGCCTTAAATTTAAACAGGT+TGG | + | chr5_4:51985474-51985493 | Msa0856960:three_prime_UTR | 35.0% | |
| CTAGATTGCTGTAATGTAAC+TGG | + | chr5_4:51985520-51985539 | Msa0856960:three_prime_UTR | 35.0% | |
| TATCCAACTGAAGAAAAGCA+AGG | - | chr5_4:51985650-51985669 | None:intergenic | 35.0% | |
| ATGTAATTGCGTACCCATGA+TGG | + | chr5_4:51981056-51981075 | Msa0856960:intron | 40.0% | |
| ! | GTACCCATGATGGAAAGATT+TGG | + | chr5_4:51981066-51981085 | Msa0856960:intron | 40.0% |
| !!! | TTCTGGGGTGTTGAATTTTG+AGG | + | chr5_4:51981171-51981190 | Msa0856960:intron | 40.0% |
| !! | AAGAAGCACTATCCTAACAC+AGG | - | chr5_4:51981531-51981550 | None:intergenic | 40.0% |
| ! | ATGGTGTTGAAGAAGAGACT+TGG | + | chr5_4:51981781-51981800 | Msa0856960:CDS | 40.0% |
| !! | AGAGACTTGGTAATGGATTC+AGG | + | chr5_4:51981794-51981813 | Msa0856960:CDS | 40.0% |
| !! | GAGACTTGGTAATGGATTCA+GGG | + | chr5_4:51981795-51981814 | Msa0856960:CDS | 40.0% |
| !! | TAATGGATTCAGGGACTATC+AGG | + | chr5_4:51981804-51981823 | Msa0856960:CDS | 40.0% |
| TTGGACATCTAGGTACCTTA+GGG | - | chr5_4:51981831-51981850 | None:intergenic | 40.0% | |
| CTTACAGATCTTGGACATCT+AGG | - | chr5_4:51981841-51981860 | None:intergenic | 40.0% | |
| ! | GTAGTTCAAAAGCACAAGAG+TGG | - | chr5_4:51981983-51982002 | None:intergenic | 40.0% |
| GAACTACTTGCATCTTTAGC+CGG | + | chr5_4:51981996-51982015 | Msa0856960:CDS | 40.0% | |
| AACATCAGATGCATTGCTAG+AGG | - | chr5_4:51982051-51982070 | None:intergenic | 40.0% | |
| CGAAATCGCTCTTCTGTTAA+CGG | - | chr5_4:51982077-51982096 | None:intergenic | 40.0% | |
| ACAGAAGAGCGATTTCGTAA+TGG | + | chr5_4:51982080-51982099 | Msa0856960:CDS | 40.0% | |
| !! | AGAAACATCTTGAGAGTGCT+GGG | + | chr5_4:51982126-51982145 | Msa0856960:CDS | 40.0% |
| AGAAGTTTCAAACCATCACG+AGG | + | chr5_4:51982253-51982272 | Msa0856960:CDS | 40.0% | |
| GGAAACAATTCCCCACAAAA+TGG | - | chr5_4:51982356-51982375 | None:intergenic | 40.0% | |
| ! | TTCCCAATGCTTCCTTTTCA+AGG | + | chr5_4:51982372-51982391 | Msa0856960:CDS | 40.0% |
| ATTCCTCCCATTCCTTGAAA+AGG | - | chr5_4:51982387-51982406 | None:intergenic | 40.0% | |
| GCAAAATAATTAGGAAGCGG+TGG | + | chr5_4:51982507-51982526 | Msa0856960:CDS | 40.0% | |
| TTCCAATTCCAAACACTGGA+AGG | + | chr5_4:51982532-51982551 | Msa0856960:CDS | 40.0% | |
| ! | AACCTTCCAGTGTTTGGAAT+TGG | - | chr5_4:51982537-51982556 | None:intergenic | 40.0% |
| GATTGTGAACATTCTCGCTA+TGG | + | chr5_4:51982572-51982591 | Msa0856960:CDS | 40.0% | |
| TGAACATTCTCGCTATGGTA+AGG | + | chr5_4:51982577-51982596 | Msa0856960:intron | 40.0% | |
| TCCCCTAAGAAAGTAATTGG+AGG | + | chr5_4:51982998-51983017 | Msa0856960:CDS | 40.0% | |
| GTAATTGGAGGAAATAACCG+TGG | + | chr5_4:51983010-51983029 | Msa0856960:CDS | 40.0% | |
| TGCAAAAGTTCGCGTTTCTA+AGG | + | chr5_4:51983039-51983058 | Msa0856960:CDS | 40.0% | |
| ! | CGCGTTTCTAAGGATTCTAA+TGG | + | chr5_4:51983049-51983068 | Msa0856960:CDS | 40.0% |
| GACAAATCATCAATGCCAGT+AGG | - | chr5_4:51983126-51983145 | None:intergenic | 40.0% | |
| TGAAGCAACAGTTGCAGTTT+CGG | - | chr5_4:51983211-51983230 | None:intergenic | 40.0% | |
| GTGATGACTATAATAGGAGG+TGG | + | chr5_4:51983406-51983425 | Msa0856960:CDS | 40.0% | |
| ! | GCATGTTGGTGTTCTTGTTA+AGG | + | chr5_4:51983432-51983451 | Msa0856960:CDS | 40.0% |
| AGATAAACTCGGTTTCGTGT+TGG | + | chr5_4:51983519-51983538 | Msa0856960:CDS | 40.0% | |
| CTCTTAGCTTAGACTCTGTT+TGG | + | chr5_4:51983640-51983659 | Msa0856960:intron | 40.0% | |
| CAATTCGAACAGGCCTTTAA+TGG | + | chr5_4:51983969-51983988 | Msa0856960:intron | 40.0% | |
| GCAATAAACTAAGTGGCTTG+TGG | + | chr5_4:51983991-51984010 | Msa0856960:intron | 40.0% | |
| !! | AACTAAGTGGCTTGTGGTTT+TGG | + | chr5_4:51983997-51984016 | Msa0856960:intron | 40.0% |
| TTGGATTTGTCTAGGTCTCT+AGG | + | chr5_4:51984103-51984122 | Msa0856960:intron | 40.0% | |
| GAAATCCCTGAATCTATGGA+GGG | - | chr5_4:51984133-51984152 | None:intergenic | 40.0% | |
| AGAAATCCCTGAATCTATGG+AGG | - | chr5_4:51984134-51984153 | None:intergenic | 40.0% | |
| TCCTCCTTGCTTACAAATAC+TGG | + | chr5_4:51984169-51984188 | Msa0856960:CDS | 40.0% | |
| TCCTTGCTTACAAATACTGG+CGG | + | chr5_4:51984172-51984191 | Msa0856960:CDS | 40.0% | |
| GTTGGAACTGGAAGGTAATA+TGG | + | chr5_4:51984424-51984443 | Msa0856960:intron | 40.0% | |
| ! | ATCAGCTTCACCGTCTTTTT+AGG | + | chr5_4:51984449-51984468 | Msa0856960:intron | 40.0% |
| ACTTTCGCTGCCTAAAAAGA+CGG | - | chr5_4:51984462-51984481 | None:intergenic | 40.0% | |
| !! | TCTTTTTAGGCAGCGAAAGT+GGG | + | chr5_4:51984462-51984481 | Msa0856960:intron | 40.0% |
| !!! | GTTTTGAGAATGCAGACCAT+AGG | + | chr5_4:51984535-51984554 | Msa0856960:CDS | 40.0% |
| !! | TTGCCTTTAGAGGTTTTGAC+GGG | + | chr5_4:51984688-51984707 | Msa0856960:intron | 40.0% |
| ! | AATATCAGACTCGGTACTTG+CGG | + | chr5_4:51985077-51985096 | Msa0856960:intron | 40.0% |
| TACAACGTATAGCTAATGGC+CGG | - | chr5_4:51985128-51985147 | None:intergenic | 40.0% | |
| !!! | TGAACTTTTGGTTTGTGTGC+AGG | + | chr5_4:51985177-51985196 | Msa0856960:intron | 40.0% |
| ! | TGGTTTGTGTGCAGGATAAA+TGG | + | chr5_4:51985185-51985204 | Msa0856960:intron | 40.0% |
| !! | TTTTGGCTGCACATGCTTAT+TGG | + | chr5_4:51985287-51985306 | Msa0856960:CDS | 40.0% |
| !! | GGCCAGCAAAGAATTTGTTA+AGG | - | chr5_4:51985458-51985477 | None:intergenic | 40.0% |
| !! | TCTCCTTGCTTTTCTTCAGT+TGG | + | chr5_4:51985644-51985663 | Msa0856960:three_prime_UTR | 40.0% |
| ! | TGGAATTTGAGATCCGATCG+TGG | + | chr5_4:51981086-51981105 | Msa0856960:intron | 45.0% |
| CATAGCCTAACTTCCACGAT+CGG | - | chr5_4:51981102-51981121 | None:intergenic | 45.0% | |
| CTTGGACATCTAGGTACCTT+AGG | - | chr5_4:51981832-51981851 | None:intergenic | 45.0% | |
| TTCAAGAAACCAGTCGAGGA+TGG | + | chr5_4:51981957-51981976 | Msa0856960:CDS | 45.0% | |
| ATCAGATGCATTGCTAGAGG+TGG | - | chr5_4:51982048-51982067 | None:intergenic | 45.0% | |
| ! | GAGAAACATCTTGAGAGTGC+TGG | + | chr5_4:51982125-51982144 | Msa0856960:CDS | 45.0% |
| CCTTCTTTAGCCAACTTGAG+CGG | + | chr5_4:51982317-51982336 | Msa0856960:CDS | 45.0% | |
| !! | CTTCCTTTTCAAGGAATGGG+AGG | + | chr5_4:51982381-51982400 | Msa0856960:CDS | 45.0% |
| GGGAGGAATGCTAGTAAGTT+AGG | + | chr5_4:51982398-51982417 | Msa0856960:CDS | 45.0% | |
| CAAAGTTTGCACCAAACCGA+AGG | + | chr5_4:51982457-51982476 | Msa0856960:CDS | 45.0% | |
| AGGTCTAAAAGCCTTCGGTT+TGG | - | chr5_4:51982471-51982490 | None:intergenic | 45.0% | |
| CGTGAAGGTCTAAAAGCCTT+CGG | - | chr5_4:51982476-51982495 | None:intergenic | 45.0% | |
| TTGCGTGCAATGTATCGTGA+AGG | - | chr5_4:51982491-51982510 | None:intergenic | 45.0% | |
| GGACTTCCAATTCCAAACAC+TGG | + | chr5_4:51982528-51982547 | Msa0856960:CDS | 45.0% | |
| AACGGTAAGAACAGGACTTG+CGG | - | chr5_4:51982701-51982720 | None:intergenic | 45.0% | |
| AGAAAAGCTGTCTTGGTGAG+AGG | - | chr5_4:51982724-51982743 | None:intergenic | 45.0% | |
| GGTGCAAAGAAAAGCTGTCT+TGG | - | chr5_4:51982731-51982750 | None:intergenic | 45.0% | |
| GTCTTCCTCTTATGACTCGA+GGG | - | chr5_4:51982863-51982882 | None:intergenic | 45.0% | |
| AGTCTTCCTCTTATGACTCG+AGG | - | chr5_4:51982864-51982883 | None:intergenic | 45.0% | |
| AGTGTCACACTCTGTTGAAG+AGG | + | chr5_4:51982906-51982925 | Msa0856960:CDS | 45.0% | |
| ! | GAACTTTTGCAGATGAGCCA+CGG | - | chr5_4:51983030-51983049 | None:intergenic | 45.0% |
| GCGAAACTTTACTGTACGCA+AGG | - | chr5_4:51983148-51983167 | None:intergenic | 45.0% | |
| AGTTTCGCATCGAGTCATTC+AGG | + | chr5_4:51983160-51983179 | Msa0856960:CDS | 45.0% | |
| GAAGCAACAGTTGCAGTTTC+GGG | - | chr5_4:51983210-51983229 | None:intergenic | 45.0% | |
| ATAGAGGACAGTTATGGAGG+CGG | + | chr5_4:51983384-51983403 | Msa0856960:intron | 45.0% | |
| GAGGCGGTGATGACTATAAT+AGG | + | chr5_4:51983400-51983419 | Msa0856960:CDS | 45.0% | |
| GCGGTGATGACTATAATAGG+AGG | + | chr5_4:51983403-51983422 | Msa0856960:CDS | 45.0% | |
| AACAGAACTCTTCGTCAGAC+TGG | + | chr5_4:51983475-51983494 | Msa0856960:CDS | 45.0% | |
| TGAGATGCTACATGGTGAGA+AGG | - | chr5_4:51983589-51983608 | None:intergenic | 45.0% | |
| CTATTCAACTTTCGCTCACC+TGG | - | chr5_4:51983617-51983636 | None:intergenic | 45.0% | |
| GAACTCCCTCCATAGATTCA+GGG | + | chr5_4:51984125-51984144 | Msa0856960:CDS | 45.0% | |
| AGGGATTTCTGTTGCCAAAC+AGG | + | chr5_4:51984144-51984163 | Msa0856960:CDS | 45.0% | |
| GGGATTTCTGTTGCCAAACA+GGG | + | chr5_4:51984145-51984164 | Msa0856960:CDS | 45.0% | |
| GCCAGTATTTGTAAGCAAGG+AGG | - | chr5_4:51984173-51984192 | None:intergenic | 45.0% | |
| ACCGCCAGTATTTGTAAGCA+AGG | - | chr5_4:51984176-51984195 | None:intergenic | 45.0% | |
| ! | CAAGGGAAGAAGCTGATTCA+TGG | - | chr5_4:51984216-51984235 | None:intergenic | 45.0% |
| TGTTCCAGCTCATAGTACTG+AGG | + | chr5_4:51984285-51984304 | Msa0856960:CDS | 45.0% | |
| AATGCCTCAGTACTATGAGC+TGG | - | chr5_4:51984292-51984311 | None:intergenic | 45.0% | |
| TGGTCCAGTGTTCTGATTCA+CGG | - | chr5_4:51984326-51984345 | None:intergenic | 45.0% | |
| AGCACTTGTTCATGCAGTTG+AGG | + | chr5_4:51984399-51984418 | Msa0856960:CDS | 45.0% | |
| GTTCATGCAGTTGAGGAAGT+TGG | + | chr5_4:51984406-51984425 | Msa0856960:CDS | 45.0% | |
| TTGAGGAAGTTGGAACTGGA+AGG | + | chr5_4:51984416-51984435 | Msa0856960:CDS | 45.0% | |
| !! | GTCTTTTTAGGCAGCGAAAG+TGG | + | chr5_4:51984461-51984480 | Msa0856960:intron | 45.0% |
| TGTCCCGTCAAAACCTCTAA+AGG | - | chr5_4:51984694-51984713 | None:intergenic | 45.0% | |
| ATCTCTCCTCAACAAAGGAG+AGG | + | chr5_4:51985232-51985251 | Msa0856960:CDS | 45.0% | |
| TTCCTCAGGAGCTATTGGAT+AGG | + | chr5_4:51985263-51985282 | Msa0856960:CDS | 45.0% | |
| TCCTCAGGAGCTATTGGATA+GGG | + | chr5_4:51985264-51985283 | Msa0856960:CDS | 45.0% | |
| ! | GGAGCTATTGGATAGGGTTT+TGG | + | chr5_4:51985270-51985289 | Msa0856960:CDS | 45.0% |
| TTGATGCTTGACATGCTGCT+TGG | - | chr5_4:51985326-51985345 | None:intergenic | 45.0% | |
| CACAAGTGGTTGGACAACAT+TGG | - | chr5_4:51985350-51985369 | None:intergenic | 45.0% | |
| !!! | TTAATAAATTAGTTTAAAAT+TGG | + | chr5_4:51981448-51981467 | Msa0856960:intron | 5.0% |
| GAGATCCGATCGTGGAAGTT+AGG | + | chr5_4:51981094-51981113 | Msa0856960:intron | 50.0% | |
| TGCGTTCAAGAAACCAGTCG+AGG | + | chr5_4:51981953-51981972 | Msa0856960:CDS | 50.0% | |
| TTTAGCCGGTGAGTTGCTGA+AGG | + | chr5_4:51982010-51982029 | Msa0856960:CDS | 50.0% | |
| ACTCTCCTTCAGCAACTCAC+CGG | - | chr5_4:51982018-51982037 | None:intergenic | 50.0% | |
| !! | CCGCTCAAGTTGGCTAAAGA+AGG | - | chr5_4:51982320-51982339 | None:intergenic | 50.0% |
| TGGAGCAACCTTCCAGTGTT+TGG | - | chr5_4:51982543-51982562 | None:intergenic | 50.0% | |
| GTGAGAGGAACGGTAAGAAC+AGG | - | chr5_4:51982709-51982728 | None:intergenic | 50.0% | |
| AGCTGTCTTGGTGAGAGGAA+CGG | - | chr5_4:51982719-51982738 | None:intergenic | 50.0% | |
| AGGGGTTCGATGCTAACTCA+TGG | + | chr5_4:51982944-51982963 | Msa0856960:CDS | 50.0% | |
| GGTTCGATGCTAACTCATGG+TGG | + | chr5_4:51982947-51982966 | Msa0856960:CDS | 50.0% | |
| TCGATGCTAACTCATGGTGG+AGG | + | chr5_4:51982950-51982969 | Msa0856960:CDS | 50.0% | |
| GGAACGTCGACGTAAAGTTC+TGG | - | chr5_4:51983189-51983208 | None:intergenic | 50.0% | |
| ATAGGAGGTGGAGTGCATGT+TGG | + | chr5_4:51983418-51983437 | Msa0856960:CDS | 50.0% | |
| GGAGAAGCTTGAGAAGAGCT+AGG | - | chr5_4:51983547-51983566 | None:intergenic | 50.0% | |
| GCTTCTCCAGTTGTTTGTGC+TGG | + | chr5_4:51983559-51983578 | Msa0856960:CDS | 50.0% | |
| GGATCACCAGCACAAACAAC+TGG | - | chr5_4:51983568-51983587 | None:intergenic | 50.0% | |
| TGGTAGGCTGAGATGCTACA+TGG | - | chr5_4:51983597-51983616 | None:intergenic | 50.0% | |
| ATGTAGCATCTCAGCCTACC+AGG | + | chr5_4:51983596-51983615 | Msa0856960:CDS | 50.0% | |
| TCAACTTTCGCTCACCTGGT+AGG | - | chr5_4:51983613-51983632 | None:intergenic | 50.0% | |
| GGAACTCCCTCCATAGATTC+AGG | + | chr5_4:51984124-51984143 | Msa0856960:CDS | 50.0% | |
| AAGCAAGGAGGAACCCTGTT+TGG | - | chr5_4:51984161-51984180 | None:intergenic | 50.0% | |
| TGGAACAGAAACTAGCGCTC+CGG | - | chr5_4:51984272-51984291 | None:intergenic | 50.0% | |
| GTTCCCGTGAATCAGAACAC+TGG | + | chr5_4:51984319-51984338 | Msa0856960:CDS | 50.0% | |
| GGTCCAGTGTTCTGATTCAC+GGG | - | chr5_4:51984325-51984344 | None:intergenic | 50.0% | |
| AGACACAGAAAACGGTCTCC+TGG | - | chr5_4:51984371-51984390 | None:intergenic | 50.0% | |
| GCAGTTGAGGAAGTTGGAAC+TGG | + | chr5_4:51984412-51984431 | Msa0856960:CDS | 50.0% | |
| AACGTATAGCTAATGGCCGG+TGG | - | chr5_4:51985125-51985144 | None:intergenic | 50.0% | |
| TCCAATAGCTCCTGAGGAAC+TGG | - | chr5_4:51985262-51985281 | None:intergenic | 50.0% | |
| ACCCTATCCAATAGCTCCTG+AGG | - | chr5_4:51985268-51985287 | None:intergenic | 50.0% | |
| ! | TGACATGCTGCTTGGATTGG+TGG | - | chr5_4:51985318-51985337 | None:intergenic | 50.0% |
| ! | GCTTGACATGCTGCTTGGAT+TGG | - | chr5_4:51985321-51985340 | None:intergenic | 50.0% |
| CAGGGACTATCAGGTCCCTA+AGG | + | chr5_4:51981813-51981832 | Msa0856960:CDS | 55.0% | |
| CTGAACTGTCAGCCTCGTGA+TGG | - | chr5_4:51982268-51982287 | None:intergenic | 55.0% | |
| CATCACGAGGCTGACAGTTC+AGG | + | chr5_4:51982266-51982285 | Msa0856960:CDS | 55.0% | |
| TGCGACCCTCGAGTCATAAG+AGG | + | chr5_4:51982855-51982874 | Msa0856960:CDS | 55.0% | |
| GGTTCGACGCTGTACAAGCT+CGG | - | chr5_4:51984350-51984369 | None:intergenic | 55.0% | |
| ! | AGCTTGTACAGCGTCGAACC+AGG | + | chr5_4:51984350-51984369 | Msa0856960:CDS | 55.0% |
| ACATTCACACACCCTGCCAC+CGG | + | chr5_4:51985106-51985125 | Msa0856960:intron | 55.0% | |
| ATAGCTAATGGCCGGTGGCA+GGG | - | chr5_4:51985120-51985139 | None:intergenic | 55.0% | |
| TATAGCTAATGGCCGGTGGC+AGG | - | chr5_4:51985121-51985140 | None:intergenic | 55.0% | |
| GGCTGTCCTCTCCTTTGTTG+AGG | - | chr5_4:51985241-51985260 | None:intergenic | 55.0% | |
| GCCAGTTCCTCAGGAGCTAT+TGG | + | chr5_4:51985258-51985277 | Msa0856960:CDS | 55.0% | |
| CAAGAGTGGCCATCCTCGAC+TGG | - | chr5_4:51981969-51981988 | None:intergenic | 60.0% | |
| CGACGCTGTACAAGCTCGGA+TGG | - | chr5_4:51984346-51984365 | None:intergenic | 60.0% | |
| GAGAGGACAGCCAGTTCCTC+AGG | + | chr5_4:51985249-51985268 | Msa0856960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 51980784 | 51985670 | 51980784 | ID=Msa0856960;Name=Msa0856960 |
| chr5_4 | mRNA | 51980784 | 51985670 | 51980784 | ID=Msa0856960-mRNA-1;Parent=Msa0856960;Name=Msa0856960-mRNA-1;_AED=0.10;_eAED=0.10;_QI=260|1|1|1|0.87|0.77|9|292|609 |
| chr5_4 | exon | 51980784 | 51980980 | 51980784 | ID=Msa0856960-mRNA-1:exon:16276;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51981718 | 51981861 | 51981718 | ID=Msa0856960-mRNA-1:exon:16277;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51981945 | 51982593 | 51981945 | ID=Msa0856960-mRNA-1:exon:16278;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51982846 | 51983070 | 51982846 | ID=Msa0856960-mRNA-1:exon:16279;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51983157 | 51983236 | 51983157 | ID=Msa0856960-mRNA-1:exon:16280;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51983388 | 51983617 | 51983388 | ID=Msa0856960-mRNA-1:exon:16281;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51984117 | 51984437 | 51984117 | ID=Msa0856960-mRNA-1:exon:16282;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51984512 | 51984575 | 51984512 | ID=Msa0856960-mRNA-1:exon:16283;Parent=Msa0856960-mRNA-1 |
| chr5_4 | exon | 51985199 | 51985670 | 51985199 | ID=Msa0856960-mRNA-1:exon:16284;Parent=Msa0856960-mRNA-1 |
| chr5_4 | five_prime_UTR | 51980784 | 51980980 | 51980784 | ID=Msa0856960-mRNA-1:five_prime_utr;Parent=Msa0856960-mRNA-1 |
| chr5_4 | five_prime_UTR | 51981718 | 51981780 | 51981718 | ID=Msa0856960-mRNA-1:five_prime_utr;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51981781 | 51981861 | 51981781 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51981945 | 51982593 | 51981945 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51982846 | 51983070 | 51982846 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51983157 | 51983236 | 51983157 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51983388 | 51983617 | 51983388 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51984117 | 51984437 | 51984117 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51984512 | 51984575 | 51984512 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | CDS | 51985199 | 51985378 | 51985199 | ID=Msa0856960-mRNA-1:cds;Parent=Msa0856960-mRNA-1 |
| chr5_4 | three_prime_UTR | 51985379 | 51985670 | 51985379 | ID=Msa0856960-mRNA-1:three_prime_utr;Parent=Msa0856960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
