AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419990 MtrunA17_Chr2g0321691 92.120 533 18 2 1 511 1 531 0.0 869
Msa1419990 MtrunA17_Chr4g0053171 34.127 126 76 3 244 365 40 162 3.59e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419990 AT2G27350.1 62.727 440 136 5 98 511 68 505 1.65e-166 481
Msa1419990 AT2G27350.2 62.727 440 136 5 98 511 68 505 1.65e-166 481
Msa1419990 AT2G27350.3 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa1419990 AT2G27350.4 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa1419990 AT2G27350.6 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa1419990 AT2G27350.5 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa1419990 AT5G67170.2 33.094 139 83 3 244 373 36 173 3.95e-16 80.5
Msa1419990 AT5G67170.1 33.094 139 83 3 244 373 36 173 3.95e-16 80.5

Find 181 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATTGAAATTAAGAAAT+TGG 0.111880 tig0024736:+16573 None:intergenic
AACCCTTTCTGGCAGGTTTA+TGG 0.130034 tig0024736:-11801 Msa1419990:intron
ATTGAGGCATACAGCATATT+TGG 0.176533 tig0024736:-10613 Msa1419990:CDS
AAATGAAGACTTTCCATTAA+AGG 0.214610 tig0024736:+15903 None:intergenic
GGATATTCATTTATTCGATT+TGG 0.237876 tig0024736:+10458 None:intergenic
ATTGATATTAGAAGGGTAAA+AGG 0.272382 tig0024736:-14855 Msa1419990:CDS
TTCTTTCCCACTTTCCATCC+TGG 0.297988 tig0024736:+10702 None:intergenic
ACCCTTTCTGGCAGGTTTAT+GGG 0.298664 tig0024736:-11800 Msa1419990:intron
CCCACAATTGGTGCAGGACT+TGG 0.302410 tig0024736:-11521 Msa1419990:CDS
AATGAAGACTTTCCATTAAA+GGG 0.311292 tig0024736:+15904 None:intergenic
TTGAGGCATACAGCATATTT+GGG 0.322519 tig0024736:-10612 Msa1419990:CDS
GCACGATTAGGGTTAGGGTT+AGG 0.323331 tig0024736:+16074 None:intergenic
ATTATTGAAATTAAGAAATT+GGG 0.328395 tig0024736:+16574 None:intergenic
AATGATACGCATACTCCTTT+AGG 0.333180 tig0024736:-15873 Msa1419990:CDS
GAACACGCGATAAACTCTTT+TGG 0.341163 tig0024736:-16192 Msa1419990:five_prime_UTR
AGTTTGAAATTGATATTAGA+AGG 0.344316 tig0024736:-14863 Msa1419990:CDS
TTCTATGATTTGTTACTTGT+TGG 0.348240 tig0024736:-10578 Msa1419990:CDS
GCAGATGAGCGTAGATTATA+TGG 0.348920 tig0024736:-14736 Msa1419990:intron
CACGATTAGGGTTAGGGTTA+GGG 0.352773 tig0024736:+16075 None:intergenic
GAGCCTATCAATACATTTCA+TGG 0.353732 tig0024736:-11626 Msa1419990:CDS
AGACTCAGAATTGTATGATT+TGG 0.355913 tig0024736:-14763 Msa1419990:CDS
CATACAATGTATAATAGATT+TGG 0.356783 tig0024736:+10294 None:intergenic
AGTATGCTGGGAGTAGTAAT+AGG 0.363405 tig0024736:-15941 Msa1419990:CDS
AAAGAGTGATGACCCTTTAA+TGG 0.366219 tig0024736:-15916 Msa1419990:CDS
GCAGGTTGCGGTTGCGGAGG+AGG 0.366993 tig0024736:-16399 Msa1419990:intron
GAAAGTGGAGAGGAGGAGCT+TGG 0.377608 tig0024736:-15990 Msa1419990:CDS
TCGGCTAGGACTTCGCCTGC+TGG 0.378489 tig0024736:-15576 Msa1419990:CDS
GACCCACGGCGTCCCACAAT+TGG 0.381817 tig0024736:-11533 Msa1419990:CDS
GGTGGAACAGGTGGAGGTGG+AGG 0.383817 tig0024736:+15708 None:intergenic
TTGCCGTGATGGAAGCTTCT+CGG 0.388388 tig0024736:-10993 Msa1419990:CDS
GATGATGTTGTGGAGTATGC+TGG 0.388990 tig0024736:-15954 Msa1419990:CDS
TCTTTCCCACTTTCCATCCT+GGG 0.392643 tig0024736:+10703 None:intergenic
GAAGAAGACCCAGCACGATT+AGG 0.394372 tig0024736:+16062 None:intergenic
AAGAAGACCCAGCACGATTA+GGG 0.398736 tig0024736:+16063 None:intergenic
CTTCCATGAAATGTATTGAT+AGG 0.401908 tig0024736:+11623 None:intergenic
GTGGTTGCAGGTTGCGGTTG+CGG 0.403972 tig0024736:-16405 Msa1419990:intron
TGCCGTGATGGAAGCTTCTC+GGG 0.407832 tig0024736:-10992 Msa1419990:CDS
TCTCTTCCTCTTACAGTATG+AGG 0.408181 tig0024736:+13414 None:intergenic
GACCCAGCACGATTAGGGTT+AGG 0.414072 tig0024736:+16068 None:intergenic
TGTATGCCTCAATCGCTTGT+AGG 0.415074 tig0024736:+10623 None:intergenic
AAGTTAGTTGATGAAGGCTT+TGG 0.423312 tig0024736:+15684 None:intergenic
GAAGGCTTTGGAGGTGGAAC+AGG 0.425435 tig0024736:+15696 None:intergenic
TCTCGGGCTGAATACCTTGC+CGG 0.426700 tig0024736:-10976 Msa1419990:CDS
TTGGGTTCAGCTCTCTTCGT+GGG 0.428248 tig0024736:-11502 Msa1419990:CDS
TTTACGTCTGCTACTGCTGC+CGG 0.430656 tig0024736:+10552 None:intergenic
GAGGAGCTTGGATTGGTTGT+TGG 0.431403 tig0024736:-15978 Msa1419990:CDS
CAGAATTGTATGATTTGGTC+AGG 0.432551 tig0024736:-14758 Msa1419990:CDS
TGCGTGGCCTGTTGTTGTTT+CGG 0.437622 tig0024736:-15595 Msa1419990:CDS
ATTTGTTACTTGTTGGAAAC+CGG 0.438822 tig0024736:-10571 Msa1419990:CDS
AATCCTGTTGTTAGCGGTGG+TGG 0.440498 tig0024736:-15741 Msa1419990:CDS
TTATCGCGTGTTCTTGCCCT+GGG 0.440879 tig0024736:+16202 None:intergenic
TGGAGAGGAGGAGCTTGGAT+TGG 0.445208 tig0024736:-15985 Msa1419990:CDS
ATGTGAGTTGCAGGATCGTC+AGG 0.447330 tig0024736:-10733 Msa1419990:intron
ACTGCTGAGCCATCTTCCTC+TGG 0.448459 tig0024736:-10907 Msa1419990:CDS
GATGTTAAAGAAGAGATTGA+GGG 0.449253 tig0024736:-15819 Msa1419990:CDS
TTTATCGCGTGTTCTTGCCC+TGG 0.450373 tig0024736:+16201 None:intergenic
GAATTTAAGTTAGTTGATGA+AGG 0.450932 tig0024736:+15678 None:intergenic
TATACATTTCACACATGGCT+TGG 0.451765 tig0024736:+11763 None:intergenic
CCCAAGTCCTGCACCAATTG+TGG 0.451802 tig0024736:+11520 None:intergenic
ACCCAGCACGATTAGGGTTA+GGG 0.453125 tig0024736:+16069 None:intergenic
AATTCAAGAAGGAGTGCATC+GGG 0.454425 tig0024736:-15660 Msa1419990:CDS
CGGCTAGGACTTCGCCTGCT+GGG 0.458808 tig0024736:-15575 Msa1419990:CDS
GAGTAGGAGTATATATGAAT+AGG 0.459015 tig0024736:+11735 None:intergenic
GTTCAACGTGGTTCTTCTGC+TGG 0.459785 tig0024736:-16128 Msa1419990:CDS
AGATGTTAAAGAAGAGATTG+AGG 0.460740 tig0024736:-15820 Msa1419990:CDS
AACCCTAACCCTAATCGTGC+TGG 0.461432 tig0024736:-16071 Msa1419990:CDS
ACTTACTACATCATCATAAG+AGG 0.463060 tig0024736:+15473 None:intergenic
GTTGATGAAGGCTTTGGAGG+TGG 0.469803 tig0024736:+15690 None:intergenic
CCACCACCACCGCTAACAAC+AGG 0.470320 tig0024736:+15738 None:intergenic
GAGAGTGGCACGTGAGATAG+AGG 0.471351 tig0024736:+16695 None:intergenic
GATCCTGCATTAACAGCATT+AGG 0.471649 tig0024736:+15633 None:intergenic
TAATCGTGCTGGGTCTTCTT+CGG 0.472975 tig0024736:-16060 Msa1419990:CDS
GGTCTCGACCTTCATCTCCC+CGG 0.476006 tig0024736:-15554 Msa1419990:CDS
GTCTCGACCTTCATCTCCCC+GGG 0.476186 tig0024736:-15553 Msa1419990:CDS
CACGTCTTTAGGAGCGGGAG+AGG 0.481120 tig0024736:-13471 Msa1419990:intron
GGTCTGCAACAGCACGGAAA+AGG 0.483309 tig0024736:+14796 None:intergenic
CTGTGTAACGTGCTCCGGCC+GGG 0.484018 tig0024736:+16037 None:intergenic
ACGAAAACTTCATTTCCTAA+AGG 0.485670 tig0024736:+15858 None:intergenic
GGAGGTGGAACAGGTGGAGG+TGG 0.486650 tig0024736:+15705 None:intergenic
CTTCACTTTCACTATGAGCC+CGG 0.486820 tig0024736:+15535 None:intergenic
TGGGTCTTCTTCGGCCCGGC+CGG 0.487424 tig0024736:-16051 Msa1419990:CDS
ATCTCTCATATATCAAACTT+AGG 0.489702 tig0024736:+10339 None:intergenic
TTAGTTGATGAAGGCTTTGG+AGG 0.490951 tig0024736:+15687 None:intergenic
GTATGCTGGGAGTAGTAATA+GGG 0.491306 tig0024736:-15940 Msa1419990:CDS
TTTGGAGGTGGAACAGGTGG+AGG 0.494963 tig0024736:+15702 None:intergenic
TTCACTTTCACTATGAGCCC+GGG 0.495969 tig0024736:+15536 None:intergenic
CCACAATTGGTGCAGGACTT+GGG 0.496349 tig0024736:-11520 Msa1419990:CDS
GGCTTTGGAGGTGGAACAGG+TGG 0.497303 tig0024736:+15699 None:intergenic
TGCACCTGTGTAACGTGCTC+CGG 0.499439 tig0024736:+16032 None:intergenic
GGAAATTGAACTTGCCGTGA+TGG 0.500131 tig0024736:-11004 Msa1419990:CDS
CTTGGGTTCAGCTCTCTTCG+TGG 0.501925 tig0024736:-11503 Msa1419990:CDS
TAGTTACCTACAAGCGATTG+AGG 0.502638 tig0024736:-10629 Msa1419990:CDS
CCTGTGTAACGTGCTCCGGC+CGG 0.503618 tig0024736:+16036 None:intergenic
AAATCGTTCAGCAAAGGCAT+TGG 0.506180 tig0024736:-16235 Msa1419990:five_prime_UTR
CATGAATATGTTACTGTCGA+TGG 0.506460 tig0024736:-10656 Msa1419990:CDS
TAAGAGGAAGAGAAGAGATA+AGG 0.507324 tig0024736:-13404 Msa1419990:intron
GCACCAATTGTGGGACGCCG+TGG 0.510578 tig0024736:+11530 None:intergenic
CTATGAGCCCGGGGAGATGA+AGG 0.510791 tig0024736:+15546 None:intergenic
CCAAGTCCTGCACCAATTGT+GGG 0.516638 tig0024736:+11521 None:intergenic
TGATGAAAACTTAGGCGTAC+TGG 0.517126 tig0024736:+11581 None:intergenic
ATGATGTTGTGGAGTATGCT+GGG 0.520937 tig0024736:-15953 Msa1419990:CDS
GTCCTAGCCGAAACAACAAC+AGG 0.525011 tig0024736:+15588 None:intergenic
GTTGCAGGTTGCGGTTGCGG+AGG 0.527495 tig0024736:-16402 Msa1419990:intron
ATAAGCTCTACCTGTGGAGT+AGG 0.529541 tig0024736:+11719 None:intergenic
TCTCCTAATGCTGTTAATGC+AGG 0.529824 tig0024736:-15636 Msa1419990:CDS
GGTTGTTGGTGATGATGTTG+TGG 0.533732 tig0024736:-15964 Msa1419990:CDS
GTTTGAAATTGATATTAGAA+GGG 0.536886 tig0024736:-14862 Msa1419990:CDS
AAACATACTAGAGTAAATAC+AGG 0.536953 tig0024736:+10437 None:intergenic
AAGCCCTCGTTCTCTATCAC+TGG 0.537120 tig0024736:+15774 None:intergenic
GGTTACCATGATGAAAACTT+AGG 0.539612 tig0024736:+11573 None:intergenic
GCATTGGAATCACTGCTCCC+AGG 0.542057 tig0024736:-16219 Msa1419990:five_prime_UTR
GGTCAACAAGGGAGTTGTAA+TGG 0.546094 tig0024736:+11552 None:intergenic
TGGGACGCCGTGGGTCAACA+AGG 0.546376 tig0024736:+11540 None:intergenic
ATGAATATGTTACTGTCGAT+GGG 0.547760 tig0024736:-10655 Msa1419990:CDS
CCTGTTGTTAGCGGTGGTGG+TGG 0.548646 tig0024736:-15738 Msa1419990:CDS
TAGGCGTACTGGTGGTGTAT+CGG 0.549271 tig0024736:+11592 None:intergenic
GATCGTCAGGTAGTGATCCC+AGG 0.549376 tig0024736:-10720 Msa1419990:CDS
CGGCGTCCCACAATTGGTGC+AGG 0.549910 tig0024736:-11527 Msa1419990:CDS
TAACTTGCTCCAGAGGAAGA+TGG 0.550315 tig0024736:+10898 None:intergenic
GGCCACGCAGATCCTCTCCT+TGG 0.551230 tig0024736:+15609 None:intergenic
ACAGGTGCAATCTGTTGCTA+AGG 0.553828 tig0024736:-16018 Msa1419990:CDS
GGCCTGTTGTTGTTTCGGCT+AGG 0.555957 tig0024736:-15590 Msa1419990:CDS
ACCCTAACCCTAATCGTGCT+GGG 0.564355 tig0024736:-16070 Msa1419990:CDS
CAACTAACTTAAATTCAAGA+AGG 0.565387 tig0024736:-15671 Msa1419990:CDS
TGGCACGTGAGATAGAGGTT+TGG 0.567490 tig0024736:+16700 None:intergenic
TCTTCTTTAACATCTTTCCC+AGG 0.569223 tig0024736:+15828 None:intergenic
ACAACTCCCTTGTTGACCCA+CGG 0.570726 tig0024736:-11547 Msa1419990:CDS
GGCAGCAGTAGCAGACGTAA+AGG 0.571294 tig0024736:-10550 Msa1419990:CDS
CACCAATTGTGGGACGCCGT+GGG 0.574073 tig0024736:+11531 None:intergenic
GATGAAGGTCGAGACCCAGC+AGG 0.574826 tig0024736:+15561 None:intergenic
GTTGCTAAGGATGAAGAAAG+TGG 0.575080 tig0024736:-16005 Msa1419990:CDS
GGATGAAGAAAGTGGAGAGG+AGG 0.578913 tig0024736:-15997 Msa1419990:CDS
GAGATATTAACTTGCTCCAG+AGG 0.579465 tig0024736:+10891 None:intergenic
GTTTGCAAGAATCGAGGGAA+AGG 0.580810 tig0024736:-15797 Msa1419990:CDS
AAATTCAAGAAGGAGTGCAT+CGG 0.581706 tig0024736:-15661 Msa1419990:CDS
TGAGGGTTTGCAAGAATCGA+GGG 0.582086 tig0024736:-15802 Msa1419990:CDS
CATATATACTCCTACTCCAC+AGG 0.582359 tig0024736:-11729 Msa1419990:intron
TCATAAGAGGACACATAGCA+TGG 0.582849 tig0024736:+15486 None:intergenic
GGTACATTTAAGCAACAACT+TGG 0.583320 tig0024736:-10952 Msa1419990:CDS
TTGTTGCTTAAATGTACCAC+CGG 0.583828 tig0024736:+10957 None:intergenic
TGATCTTGAGCTCACAGAGA+AGG 0.583852 tig0024736:-11025 Msa1419990:CDS
ATTCTGAGTCTCCGTACACT+TGG 0.586501 tig0024736:+14775 None:intergenic
CATTGGAATCACTGCTCCCA+GGG 0.587906 tig0024736:-16218 Msa1419990:five_prime_UTR
TTGAGGGTTTGCAAGAATCG+AGG 0.591729 tig0024736:-15803 Msa1419990:CDS
TGGGTTCAGCTCTCTTCGTG+GGG 0.593495 tig0024736:-11501 Msa1419990:intron
AGTGATCCCAGGATGGAAAG+TGG 0.596810 tig0024736:-10709 Msa1419990:CDS
TAAGGATGAAGAAAGTGGAG+AGG 0.597056 tig0024736:-16000 Msa1419990:CDS
ACGTCTTTAGGAGCGGGAGA+GGG 0.598464 tig0024736:-13470 Msa1419990:intron
GTGATCCCAGGATGGAAAGT+GGG 0.600838 tig0024736:-10708 Msa1419990:CDS
GAGGGTAATCCTGTTGTTAG+CGG 0.603801 tig0024736:-15747 Msa1419990:CDS
CAGTAGCAGACGTAAAGGAA+AGG 0.605981 tig0024736:-10545 Msa1419990:CDS
GCTGTTGCAGACCAAGTGTA+CGG 0.608749 tig0024736:-14786 Msa1419990:CDS
AGAGAACGAGGGCTTGTGTG+AGG 0.609028 tig0024736:-15766 Msa1419990:CDS
GCTTAAATGTACCACCGGCA+AGG 0.611381 tig0024736:+10962 None:intergenic
CTGAAGAAATCGTTCAGCAA+AGG 0.611706 tig0024736:-16241 Msa1419990:five_prime_UTR
CGGGCTCATAGTGAAAGTGA+AGG 0.622688 tig0024736:-15534 Msa1419990:CDS
GTGCTGGGTCTTCTTCGGCC+CGG 0.623317 tig0024736:-16055 Msa1419990:CDS
GAGAACGAGGGCTTGTGTGA+GGG 0.624656 tig0024736:-15765 Msa1419990:CDS
GTCAGGTAGTGATCCCAGGA+TGG 0.629925 tig0024736:-10716 Msa1419990:CDS
AGCCCGAGAAGCTTCCATCA+CGG 0.635675 tig0024736:+10990 None:intergenic
TCGATTATACATTTCACACA+TGG 0.637286 tig0024736:+11758 None:intergenic
TGAGGCATACAGCATATTTG+GGG 0.641767 tig0024736:-10611 Msa1419990:CDS
AGAGGTTTGGTTATGACACG+TGG 0.645455 tig0024736:+16713 None:intergenic
GGTAATCCTGTTGTTAGCGG+TGG 0.646970 tig0024736:-15744 Msa1419990:CDS
CGGGCTGAATACCTTGCCGG+TGG 0.647286 tig0024736:-10973 Msa1419990:CDS
TCACTTTCACTATGAGCCCG+GGG 0.647451 tig0024736:+15537 None:intergenic
CCGGCCGGAGCACGTTACAC+AGG 0.649179 tig0024736:-16036 Msa1419990:CDS
GGGCTCATAGTGAAAGTGAA+GGG 0.654153 tig0024736:-15533 Msa1419990:CDS
GGGACGCCGTGGGTCAACAA+GGG 0.656673 tig0024736:+11541 None:intergenic
ACACTTGGTCTGCAACAGCA+CGG 0.659941 tig0024736:+14790 None:intergenic
AAGGCCAGTGATAGAGAACG+AGG 0.680419 tig0024736:-15778 Msa1419990:CDS
AATGCAGGATCACCAAGGAG+AGG 0.689700 tig0024736:-15621 Msa1419990:CDS
GGAGGAGGAAGCTGAATCGA+CGG 0.690283 tig0024736:-16384 Msa1419990:five_prime_UTR
ACGGTGGGAGGAAAAGAGAG+TGG 0.690544 tig0024736:+16680 None:intergenic
CTGTTAATGCAGGATCACCA+AGG 0.695840 tig0024736:-15626 Msa1419990:CDS
GGAGGAAGCTGAATCGACGG+TGG 0.699779 tig0024736:-16381 Msa1419990:five_prime_UTR
AGGCCAGTGATAGAGAACGA+GGG 0.741926 tig0024736:-15777 Msa1419990:CDS
TGAAAACTTAGGCGTACTGG+TGG 0.744384 tig0024736:+11584 None:intergenic
ATTCAAGAAGGAGTGCATCG+GGG 0.750742 tig0024736:-15659 Msa1419990:CDS
CACCAAGGAGAGGATCTGCG+TGG 0.755511 tig0024736:-15611 Msa1419990:CDS
ACTCGTATCTATGTTCAACG+TGG 0.784709 tig0024736:-16140 Msa1419990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAAATTAAGAAATT+GGG + tig0024736:10419-10438 None:intergenic 10.0%
!! AATTATTGAAATTAAGAAAT+TGG + tig0024736:10420-10439 None:intergenic 10.0%
!! TTATATATTAGTTAATTAGA+AGG - tig0024736:12029-12048 Msa1419990:intron 10.0%
!! TTACAAAAATGATATTATAT+AGG - tig0024736:13314-13333 Msa1419990:intron 10.0%
!! AAACAAATTTCTAAATATTT+AGG - tig0024736:13735-13754 Msa1419990:intron 10.0%
!!! TTTTTTTGATGAAGTTTTTT+TGG - tig0024736:10559-10578 Msa1419990:CDS 15.0%
!!! TTTTTTGATGAAGTTTTTTT+GGG - tig0024736:10560-10579 Msa1419990:CDS 15.0%
!! GATAATATCTTATATTGAAA+TGG - tig0024736:12073-12092 Msa1419990:intron 15.0%
!!! ATTTAAGAAGATTTGATTTT+AGG - tig0024736:12557-12576 Msa1419990:intron 15.0%
!! AAATGGTATAAACTAAATAT+GGG + tig0024736:13904-13923 None:intergenic 15.0%
!! AACAAATTTCAAAATATTTG+TGG + tig0024736:13927-13946 None:intergenic 15.0%
!!! TTTGATTTAAAATAGTTAGT+TGG - tig0024736:14521-14540 Msa1419990:intron 15.0%
!!! ACTTTTTAACTTTTTTGAAT+AGG - tig0024736:15154-15173 Msa1419990:intron 15.0%
!! TTAGTTCATTAAAAAAATCA+TGG - tig0024736:16487-16506 Msa1419990:intron 15.0%
!!! AAAAAATTAGGGTTTTGTTT+CGG + tig0024736:10396-10415 None:intergenic 20.0%
!! AAGAAATTGGGAAAAAATTA+GGG + tig0024736:10407-10426 None:intergenic 20.0%
!! TAAGAAATTGGGAAAAAATT+AGG + tig0024736:10408-10427 None:intergenic 20.0%
!! TTAATTACTTAATGAGAACA+AGG + tig0024736:11552-11571 None:intergenic 20.0%
!! GTTCTCATTAAGTAATTAAT+TGG - tig0024736:11553-11572 Msa1419990:CDS 20.0%
!! TATATTGGCATGTTAATATT+GGG - tig0024736:11954-11973 Msa1419990:intron 20.0%
!!! AGTTTGAAATTGATATTAGA+AGG - tig0024736:12127-12146 Msa1419990:intron 20.0%
!!! GTTTGAAATTGATATTAGAA+GGG - tig0024736:12128-12147 Msa1419990:intron 20.0%
!! ATTATATGGTATGTTAATGT+TGG - tig0024736:12268-12287 Msa1419990:intron 20.0%
!! TTATATGGTATGTTAATGTT+GGG - tig0024736:12269-12288 Msa1419990:intron 20.0%
!! CGTAATATATTGAACTTATT+AGG - tig0024736:12338-12357 Msa1419990:intron 20.0%
!!! CATGAATTTTTTATTATAGC+TGG - tig0024736:12660-12679 Msa1419990:intron 20.0%
!!! TTCTTTGATTTTGTAACAAA+AGG + tig0024736:12698-12717 None:intergenic 20.0%
!! TACAAAATCAAAGAAATGTT+AGG - tig0024736:12703-12722 Msa1419990:intron 20.0%
!! ACAAAATCAAAGAAATGTTA+GGG - tig0024736:12704-12723 Msa1419990:intron 20.0%
!!! TTTTAAGATGTAAATAAGCA+AGG - tig0024736:12771-12790 Msa1419990:intron 20.0%
!! TAAATTTACATTTATACCAC+AGG + tig0024736:13231-13250 None:intergenic 20.0%
!! TGGTATAAATGTAAATTTAG+CGG - tig0024736:13232-13251 Msa1419990:intron 20.0%
!! AATTCTATTAAAATATTGCC+TGG - tig0024736:13463-13482 Msa1419990:CDS 20.0%
!!! TTTTCTCAATTTATAACAGA+AGG - tig0024736:13548-13567 Msa1419990:intron 20.0%
!! TTTAAAAACAATACATGCTA+GGG + tig0024736:13717-13736 None:intergenic 20.0%
!!! TTTTAAAAACAATACATGCT+AGG + tig0024736:13718-13737 None:intergenic 20.0%
!! GAAATGGTATAAACTAAATA+TGG + tig0024736:13905-13924 None:intergenic 20.0%
!! TTTCAAAATATTTGTGGAAA+TGG + tig0024736:13921-13940 None:intergenic 20.0%
!! CATAAAAAGTTTACACAAAT+GGG + tig0024736:14586-14605 None:intergenic 20.0%
!! ACATAAAAAGTTTACACAAA+TGG + tig0024736:14587-14606 None:intergenic 20.0%
!!! GTAAACTTTTTATGTATACT+TGG - tig0024736:14592-14611 Msa1419990:intron 20.0%
!! GTTTACATGTAATAAACTAA+AGG + tig0024736:14964-14983 None:intergenic 20.0%
!! ATCATTAACAAGAAAATCAA+GGG + tig0024736:15014-15033 None:intergenic 20.0%
!! AATCATTAACAAGAAAATCA+AGG + tig0024736:15015-15034 None:intergenic 20.0%
!!! CTTTCTATTTTATTGTATGA+TGG - tig0024736:15553-15572 Msa1419990:CDS 20.0%
!! AATTTCTGTTCAATGTAATA+TGG + tig0024736:15705-15724 None:intergenic 20.0%
!!! TCTATTGATAGATTTAAGAT+GGG + tig0024736:16161-16180 None:intergenic 20.0%
!!! TTGATGTATTTGTTGAAATT+TGG - tig0024736:16207-16226 Msa1419990:five_prime_UTR 20.0%
!!! ATTATTTGCAACATTTTTCA+AGG - tig0024736:16672-16691 Msa1419990:five_prime_UTR 20.0%
!!! TTATTTGCAACATTTTTCAA+GGG - tig0024736:16673-16692 Msa1419990:five_prime_UTR 20.0%
!! CATACAATGTATAATAGATT+TGG + tig0024736:16699-16718 None:intergenic 20.0%
! AGAAAACTGAGAAAAAGAAA+CGG + tig0024736:10361-10380 None:intergenic 25.0%
!!! TTGTTGTTTAAAGTAGTTGA+AGG - tig0024736:10670-10689 Msa1419990:CDS 25.0%
!! TTTAAAGTAGTTGAAGGATT+TGG - tig0024736:10676-10695 Msa1419990:CDS 25.0%
! TTAAAGTAGTTGAAGGATTT+GGG - tig0024736:10677-10696 Msa1419990:CDS 25.0%
! AATGAAGACTTTCCATTAAA+GGG + tig0024736:11089-11108 None:intergenic 25.0%
! AAATGAAGACTTTCCATTAA+AGG + tig0024736:11090-11109 None:intergenic 25.0%
!!! GAATTTAAGTTAGTTGATGA+AGG + tig0024736:11315-11334 None:intergenic 25.0%
! CAACTAACTTAAATTCAAGA+AGG - tig0024736:11319-11338 Msa1419990:intron 25.0%
!!! TTTTTTTTATATCCCCAGTT+AGG - tig0024736:11605-11624 Msa1419990:CDS 25.0%
! AAACTATCCTACAATTTAAC+TGG - tig0024736:11810-11829 Msa1419990:intron 25.0%
! AACTATCCTACAATTTAACT+GGG - tig0024736:11811-11830 Msa1419990:intron 25.0%
!!! TTTTGAAAGAGTTGTTTGTT+AGG - tig0024736:11926-11945 Msa1419990:intron 25.0%
! CAATATTAACATGCCAATAT+AGG + tig0024736:11955-11974 None:intergenic 25.0%
! CTATATTGGCATGTTAATAT+TGG - tig0024736:11953-11972 Msa1419990:intron 25.0%
!! TTAATTAGAAGGTTGATTCA+TGG - tig0024736:12040-12059 Msa1419990:intron 25.0%
! ATTGATATTAGAAGGGTAAA+AGG - tig0024736:12135-12154 Msa1419990:intron 25.0%
!! ACTTACTTATTTGATTTCCA+CGG - tig0024736:12383-12402 Msa1419990:intron 25.0%
!!! CATAATAAATACCGCTTTTT+GGG + tig0024736:12425-12444 None:intergenic 25.0%
!!! TCATAATAAATACCGCTTTT+TGG + tig0024736:12426-12445 None:intergenic 25.0%
! AAAAGCGGTATTTATTATGA+AGG - tig0024736:12426-12445 Msa1419990:intron 25.0%
!!! AATTTTTTATTATAGCTGGC+CGG - tig0024736:12664-12683 Msa1419990:intron 25.0%
! ATGTAAATAAGCAAGGAATA+AGG - tig0024736:12778-12797 Msa1419990:intron 25.0%
! TGTAAATAAGCAAGGAATAA+GGG - tig0024736:12779-12798 Msa1419990:intron 25.0%
! AATTACACTAAAACATGGAA+TGG + tig0024736:13159-13178 None:intergenic 25.0%
! GCTAAAATTACACTAAAACA+TGG + tig0024736:13164-13183 None:intergenic 25.0%
!!! CATTTTTTCCTTCATATAGT+GGG + tig0024736:13291-13310 None:intergenic 25.0%
!!! ACATTTTTTCCTTCATATAG+TGG + tig0024736:13292-13311 None:intergenic 25.0%
!!! GAAATTTGTTTTGTACTAAC+AGG - tig0024736:13937-13956 Msa1419990:intron 25.0%
! AATGCGGTTTAAACAAAAAA+GGG + tig0024736:14059-14078 None:intergenic 25.0%
! ATATCTTGACAAAAACAATG+CGG + tig0024736:14075-14094 None:intergenic 25.0%
! TAATTCTCTTTATCATGACA+AGG + tig0024736:14296-14315 None:intergenic 25.0%
! TAACTATAACTGTAACTTCA+CGG + tig0024736:14633-14652 None:intergenic 25.0%
! ATTACATGTAAACACATTAC+AGG - tig0024736:14971-14990 Msa1419990:intron 25.0%
! TACATTGAACAGAAATTGAT+TGG - tig0024736:15708-15727 Msa1419990:CDS 25.0%
! GTTCTTTAAATTGAACTTGA+CGG - tig0024736:15877-15896 Msa1419990:CDS 25.0%
! ATATCTCTTCTCATACAATT+TGG - tig0024736:16115-16134 Msa1419990:CDS 25.0%
! GTCTATTGATAGATTTAAGA+TGG + tig0024736:16162-16181 None:intergenic 25.0%
! TATCAATAGACAGATTCATA+TGG - tig0024736:16171-16190 Msa1419990:five_prime_UTR 25.0%
!! ATGTATTTGTTGAAATTTGG+TGG - tig0024736:16210-16229 Msa1419990:five_prime_UTR 25.0%
!!! TTCTATGATTTGTTACTTGT+TGG - tig0024736:16412-16431 Msa1419990:intron 25.0%
! GGATATTCATTTATTCGATT+TGG + tig0024736:16535-16554 None:intergenic 25.0%
! AAACATACTAGAGTAAATAC+AGG + tig0024736:16556-16575 None:intergenic 25.0%
! ATCTCTCATATATCAAACTT+AGG + tig0024736:16654-16673 None:intergenic 25.0%
GAAAACTGAGAAAAAGAAAC+GGG + tig0024736:10360-10379 None:intergenic 30.0%
!!! TTTGATGAAGTTTTTTTGGG+AGG - tig0024736:10563-10582 Msa1419990:CDS 30.0%
TAAATTCGACATCTCAAAGA+AGG - tig0024736:10645-10664 Msa1419990:CDS 30.0%
! CGATAAACTCTTTTGGATTA+GGG - tig0024736:10805-10824 Msa1419990:intron 30.0%
! AATGGAAAGTCTTCATTTTG+AGG - tig0024736:11092-11111 Msa1419990:intron 30.0%
ACGAAAACTTCATTTCCTAA+AGG + tig0024736:11135-11154 None:intergenic 30.0%
AGATGTTAAAGAAGAGATTG+AGG - tig0024736:11170-11189 Msa1419990:intron 30.0%
GATGTTAAAGAAGAGATTGA+GGG - tig0024736:11171-11190 Msa1419990:intron 30.0%
ACTTACTACATCATCATAAG+AGG + tig0024736:11520-11539 None:intergenic 30.0%
! CGTGTAGGACATAATTTTTA+TGG - tig0024736:11682-11701 Msa1419990:intron 30.0%
CAAACAACTCTTTCAAAACT+AGG + tig0024736:11924-11943 None:intergenic 30.0%
! GTTTGTTAGGTTTCCTATAT+TGG - tig0024736:11939-11958 Msa1419990:intron 30.0%
ATAAGATATTATCGCAGTGA+AGG + tig0024736:12066-12085 None:intergenic 30.0%
TGAAGTAAAAAGAATGTCAG+AGG - tig0024736:12161-12180 Msa1419990:intron 30.0%
TAAAAAGAATGTCAGAGGAT+GGG - tig0024736:12166-12185 Msa1419990:intron 30.0%
AGACTCAGAATTGTATGATT+TGG - tig0024736:12227-12246 Msa1419990:intron 30.0%
! TATCCATATTTCTGCTTTGT+TGG - tig0024736:12313-12332 Msa1419990:intron 30.0%
! CTTACTTATTTGATTTCCAC+GGG - tig0024736:12384-12403 Msa1419990:intron 30.0%
TATTTATTATGAAGGTCCCT+GGG - tig0024736:12434-12453 Msa1419990:intron 30.0%
AGGTTAGCAATTCATATTGA+AGG - tig0024736:12577-12596 Msa1419990:intron 30.0%
! GAAGGTTTTTAAATGCATCT+AGG - tig0024736:12595-12614 Msa1419990:intron 30.0%
ATAAAACCTAAGCCAACAAA+TGG - tig0024736:12904-12923 Msa1419990:intron 30.0%
ATTTCCTTCATTCCATTTGT+TGG + tig0024736:12919-12938 None:intergenic 30.0%
GAATGAGCAAATATAATGTC+TGG + tig0024736:12970-12989 None:intergenic 30.0%
GACATTATATTTGCTCATTC+TGG - tig0024736:12970-12989 Msa1419990:intron 30.0%
GATGTAACACAATACATCAA+GGG + tig0024736:13003-13022 None:intergenic 30.0%
TGATGTAACACAATACATCA+AGG + tig0024736:13004-13023 None:intergenic 30.0%
!! TTTTCTCATTTTTGTTCAGC+TGG - tig0024736:13026-13045 Msa1419990:intron 30.0%
TTCTACAAAAATATTGCCTG+TGG - tig0024736:13090-13109 Msa1419990:intron 30.0%
AATTAGAATCCTACCATGAT+GGG + tig0024736:13136-13155 None:intergenic 30.0%
!! TTTTCTCACTTTTGCTTAGA+TGG - tig0024736:13400-13419 Msa1419990:intron 30.0%
! TAGATGGCATATTTTTCTTC+TGG - tig0024736:13416-13435 Msa1419990:CDS 30.0%
! ACAAAATTAGTTTGATCACC+AGG + tig0024736:13484-13503 None:intergenic 30.0%
GGTATGTCAGAACATAATTT+AGG - tig0024736:13607-13626 Msa1419990:intron 30.0%
ACATAATTTAGGCTTCTATG+TGG - tig0024736:13618-13637 Msa1419990:intron 30.0%
! AATACATGCTAGGGAAATTT+TGG + tig0024736:13708-13727 None:intergenic 30.0%
TACAGCTTTCAAAACATTTG+TGG + tig0024736:13770-13789 None:intergenic 30.0%
! AAGCTGTACTTTTGTACTTA+TGG - tig0024736:13782-13801 Msa1419990:intron 30.0%
! GAATGTGAATTTTCAACTAC+CGG + tig0024736:13977-13996 None:intergenic 30.0%
ATGCAAAATAATCCAGATGT+GGG - tig0024736:14010-14029 Msa1419990:intron 30.0%
CAATGCGGTTTAAACAAAAA+AGG + tig0024736:14060-14079 None:intergenic 30.0%
GAAAATAACTGAATGAAGAG+CGG + tig0024736:14142-14161 None:intergenic 30.0%
ATAATCGCCAAATTTCTCAT+AGG + tig0024736:14269-14288 None:intergenic 30.0%
GATCGAATAGTCAATAGAAT+TGG - tig0024736:14332-14351 Msa1419990:intron 30.0%
! GGGTCTTTGGTATTTAATTT+AGG - tig0024736:14368-14387 Msa1419990:intron 30.0%
! TTCCTTTAAAGAAGTGTGTT+TGG - tig0024736:14438-14457 Msa1419990:intron 30.0%
ATCTCTTTATCGTATGTGAT+GGG + tig0024736:14753-14772 None:intergenic 30.0%
! AAACACATTACAGGATTTTC+TGG - tig0024736:14980-14999 Msa1419990:intron 30.0%
!! TTACCTTTCCCTCTAAAATA+AGG - tig0024736:15048-15067 Msa1419990:intron 30.0%
!! TACCTTTCCCTCTAAAATAA+GGG - tig0024736:15049-15068 Msa1419990:intron 30.0%
!!! AAGTGATCCCTTATTTTAGA+GGG + tig0024736:15059-15078 None:intergenic 30.0%
!!! AAAGTGATCCCTTATTTTAG+AGG + tig0024736:15060-15079 None:intergenic 30.0%
GTAAATATGTTAACCCTTTC+TGG - tig0024736:15178-15197 Msa1419990:intron 30.0%
TCGATTATACATTTCACACA+TGG + tig0024736:15235-15254 None:intergenic 30.0%
! GAGTAGGAGTATATATGAAT+AGG + tig0024736:15258-15277 None:intergenic 30.0%
! CTTCCATGAAATGTATTGAT+AGG + tig0024736:15370-15389 None:intergenic 30.0%
! CAAATTTGTGTTTTGTCAGT+TGG + tig0024736:15605-15624 None:intergenic 30.0%
GACAGTTTCCAAGTTATATA+GGG + tig0024736:15681-15700 None:intergenic 30.0%
AGACAGTTTCCAAGTTATAT+AGG + tig0024736:15682-15701 None:intergenic 30.0%
AACAGAAATTGATTGGAAGA+TGG - tig0024736:15715-15734 Msa1419990:CDS 30.0%
!! TACTTGCATTATCGATTTGT+TGG + tig0024736:15820-15839 None:intergenic 30.0%
AATAGACAGATTCATATGGT+CGG - tig0024736:16175-16194 Msa1419990:five_prime_UTR 30.0%
ATGAATATGTTACTGTCGAT+GGG - tig0024736:16335-16354 Msa1419990:intron 30.0%
! ATTTGTTACTTGTTGGAAAC+CGG - tig0024736:16419-16438 Msa1419990:intron 30.0%
AAAAAGAAACGGGAAGAAGA+AGG + tig0024736:10350-10369 None:intergenic 35.0%
!!! TCGATTTTTTCGATTCTCAC+AGG - tig0024736:10445-10464 Msa1419990:three_prime_UTR 35.0%
CGAATCGTGAAGATTTAACA+GGG + tig0024736:10495-10514 None:intergenic 35.0%
TCGAATCGTGAAGATTTAAC+AGG + tig0024736:10496-10515 None:intergenic 35.0%
TGGGTCTGATGAGAATTATT+AGG - tig0024736:10696-10715 Msa1419990:CDS 35.0%
GGGTCTGATGAGAATTATTA+GGG - tig0024736:10697-10716 Msa1419990:CDS 35.0%
GGTCTGATGAGAATTATTAG+GGG - tig0024736:10698-10717 Msa1419990:CDS 35.0%
! GCGATAAACTCTTTTGGATT+AGG - tig0024736:10804-10823 Msa1419990:intron 35.0%
!! ACTCTTTTGGATTAGGGTTT+TGG - tig0024736:10811-10830 Msa1419990:intron 35.0%
!! CTCTTTTGGATTAGGGTTTT+GGG - tig0024736:10812-10831 Msa1419990:intron 35.0%
AAAGAGTGATGACCCTTTAA+TGG - tig0024736:11074-11093 Msa1419990:intron 35.0%
AATGATACGCATACTCCTTT+AGG - tig0024736:11117-11136 Msa1419990:intron 35.0%
! AAGTTTTCGTTGATCTTCCT+GGG - tig0024736:11145-11164 Msa1419990:intron 35.0%
TCTTCTTTAACATCTTTCCC+AGG + tig0024736:11165-11184 None:intergenic 35.0%
!! AAGTTAGTTGATGAAGGCTT+TGG + tig0024736:11309-11328 None:intergenic 35.0%
! AAATTCAAGAAGGAGTGCAT+CGG - tig0024736:11329-11348 Msa1419990:intron 35.0%
TATTCTGCCAAAAGACTTGT+AGG - tig0024736:11707-11726 Msa1419990:intron 35.0%
TAGGAATGAGGTGGATAATT+TGG - tig0024736:11726-11745 Msa1419990:intron 35.0%
! CTCTTATAGCATTGAAGAGA+AGG + tig0024736:11753-11772 None:intergenic 35.0%
AAGTAGCCCAGTTAAATTGT+AGG + tig0024736:11820-11839 None:intergenic 35.0%
GTAAAAAGAATGTCAGAGGA+TGG - tig0024736:12165-12184 Msa1419990:intron 35.0%
!! CAGAATTGTATGATTTGGTC+AGG - tig0024736:12232-12251 Msa1419990:intron 35.0%
AGCAGAAATATGGATACTGA+AGG + tig0024736:12309-12328 None:intergenic 35.0%
GATCCAACAAAGCAGAAATA+TGG + tig0024736:12319-12338 None:intergenic 35.0%
GTATTTATTATGAAGGTCCC+TGG - tig0024736:12433-12452 Msa1419990:intron 35.0%
CAGTGACATACTGCATAATT+AGG - tig0024736:12490-12509 Msa1419990:intron 35.0%
!!! CCTAGTTTTAAAACCACCTA+TGG + tig0024736:12537-12556 None:intergenic 35.0%
!!! CCATAGGTGGTTTTAAAACT+AGG - tig0024736:12534-12553 Msa1419990:intron 35.0%
GTAACAAAAGGTCATAAGTC+CGG + tig0024736:12686-12705 None:intergenic 35.0%
TGAGAATGAGTTAGTGAGAA+TGG - tig0024736:12737-12756 Msa1419990:intron 35.0%
GAGAATGAGTTAGTGAGAAT+GGG - tig0024736:12738-12757 Msa1419990:intron 35.0%
AATTGAAACATGAACAGCGT+TGG - tig0024736:12825-12844 Msa1419990:intron 35.0%
ACTCTCAGAAGTTAAAGTTC+AGG + tig0024736:12863-12882 None:intergenic 35.0%
!! TTCATTCCATTTGTTGGCTT+AGG + tig0024736:12913-12932 None:intergenic 35.0%
TAAGCCAACAAATGGAATGA+AGG - tig0024736:12912-12931 Msa1419990:intron 35.0%
GAATTAGAATCCTACCATGA+TGG + tig0024736:13137-13156 None:intergenic 35.0%
! CTCATTAGATTTGCTCATTC+TGG - tig0024736:13198-13217 Msa1419990:intron 35.0%
! CTCATTAGATTTGCTCATTC+TGG - tig0024736:13198-13217 Msa1419990:intron 35.0%
CATTCTGATTTCACGTCTTT+AGG - tig0024736:13508-13527 Msa1419990:intron 35.0%
! GTTTTACCTCATACTGTAAG+AGG - tig0024736:13570-13589 Msa1419990:intron 35.0%
TAAGAGGAAGAGAAGAGATA+AGG - tig0024736:13586-13605 Msa1419990:intron 35.0%
CTTTAGTGTGCCAATTAATC+CGG - tig0024736:13848-13867 Msa1419990:intron 35.0%
GTATAAACTAAATATGGGCC+GGG + tig0024736:13899-13918 None:intergenic 35.0%
GGTATAAACTAAATATGGGC+CGG + tig0024736:13900-13919 None:intergenic 35.0%
CATGCAAAATAATCCAGATG+TGG - tig0024736:14009-14028 Msa1419990:intron 35.0%
CATCTTAGAAGAGTAAAGCA+TGG + tig0024736:14188-14207 None:intergenic 35.0%
CGAATAGTCAATAGAATTGG+CGG - tig0024736:14335-14354 Msa1419990:intron 35.0%
GAATAGTCAATAGAATTGGC+GGG - tig0024736:14336-14355 Msa1419990:intron 35.0%
AATAGTCAATAGAATTGGCG+GGG - tig0024736:14337-14356 Msa1419990:intron 35.0%
! ATTTAATTTAGGTGCAGCAG+TGG - tig0024736:14379-14398 Msa1419990:intron 35.0%
! ATTTTACTCCCTTATAGCTG+TGG - tig0024736:14408-14427 Msa1419990:intron 35.0%
AGCCAAACACACTTCTTTAA+AGG + tig0024736:14443-14462 None:intergenic 35.0%
!! TTGGTAACTCTTGAGTCTTT+TGG - tig0024736:14540-14559 Msa1419990:intron 35.0%
CATCTCTTTATCGTATGTGA+TGG + tig0024736:14754-14773 None:intergenic 35.0%
TCGTGTATCTCAAATCTCAA+TGG - tig0024736:14803-14822 Msa1419990:CDS 35.0%
CAAATCTCAATGGACATGTT+AGG - tig0024736:14813-14832 Msa1419990:CDS 35.0%
TTGACACATTCAAAACCAAG+TGG + tig0024736:14844-14863 None:intergenic 35.0%
!!! ATCCCTTATTTTAGAGGGAA+AGG + tig0024736:15054-15073 None:intergenic 35.0%
CAACAAACTAAAACTGCATG+TGG + tig0024736:15115-15134 None:intergenic 35.0%
!!! CACATGCAGTTTTAGTTTGT+TGG - tig0024736:15113-15132 Msa1419990:intron 35.0%
!! TGTTGGCATATGTTGATAGT+TGG - tig0024736:15130-15149 Msa1419990:intron 35.0%
TATACATTTCACACATGGCT+TGG + tig0024736:15230-15249 None:intergenic 35.0%
GAGCCTATCAATACATTTCA+TGG - tig0024736:15364-15383 Msa1419990:intron 35.0%
GGTTACCATGATGAAAACTT+AGG + tig0024736:15420-15439 None:intergenic 35.0%
TTATAGAAGCCCCAAAAGAA+AGG - tig0024736:15654-15673 Msa1419990:CDS 35.0%
TATAGAAGCCCCAAAAGAAA+GGG - tig0024736:15655-15674 Msa1419990:CDS 35.0%
! TATATAGGGCCCTTTCTTTT+GGG + tig0024736:15667-15686 None:intergenic 35.0%
! TTATATAGGGCCCTTTCTTT+TGG + tig0024736:15668-15687 None:intergenic 35.0%
ATTGATTGGAAGATGGTTGA+CGG - tig0024736:15722-15741 Msa1419990:CDS 35.0%
TGTTGACAAAGATCAAGTCA+AGG - tig0024736:15772-15791 Msa1419990:CDS 35.0%
! TTGTTGCTTAAATGTACCAC+CGG + tig0024736:16036-16055 None:intergenic 35.0%
GGTACATTTAAGCAACAACT+TGG - tig0024736:16038-16057 Msa1419990:CDS 35.0%
CATGAATATGTTACTGTCGA+TGG - tig0024736:16334-16353 Msa1419990:intron 35.0%
ATTGAGGCATACAGCATATT+TGG - tig0024736:16377-16396 Msa1419990:five_prime_UTR 35.0%
TTGAGGCATACAGCATATTT+GGG - tig0024736:16378-16397 Msa1419990:five_prime_UTR 35.0%
! GAAGGCGATAGCGTTTTTAA+CGG + tig0024736:10332-10351 None:intergenic 40.0%
!!! AGGGTTTTGTTTCGGAGAAA+GGG + tig0024736:10388-10407 None:intergenic 40.0%
!!! TAGGGTTTTGTTTCGGAGAA+AGG + tig0024736:10389-10408 None:intergenic 40.0%
TTTGTAACAAGAATCGCACG+CGG + tig0024736:10524-10543 None:intergenic 40.0%
!!! GATGAAGTTTTTTTGGGAGG+TGG - tig0024736:10566-10585 Msa1419990:CDS 40.0%
CTGAAGAAATCGTTCAGCAA+AGG - tig0024736:10749-10768 Msa1419990:intron 40.0%
! AAATCGTTCAGCAAAGGCAT+TGG - tig0024736:10755-10774 Msa1419990:intron 40.0%
! GAACACGCGATAAACTCTTT+TGG - tig0024736:10798-10817 Msa1419990:intron 40.0%
ACTCGTATCTATGTTCAACG+TGG - tig0024736:10850-10869 Msa1419990:intron 40.0%
GTTGCTAAGGATGAAGAAAG+TGG - tig0024736:10985-11004 Msa1419990:CDS 40.0%
TAAGGATGAAGAAAGTGGAG+AGG - tig0024736:10990-11009 Msa1419990:CDS 40.0%
ATGATGTTGTGGAGTATGCT+GGG - tig0024736:11037-11056 Msa1419990:CDS 40.0%
AGTATGCTGGGAGTAGTAAT+AGG - tig0024736:11049-11068 Msa1419990:CDS 40.0%
GTATGCTGGGAGTAGTAATA+GGG - tig0024736:11050-11069 Msa1419990:CDS 40.0%
! GAAGTTTTCGTTGATCTTCC+TGG - tig0024736:11144-11163 Msa1419990:intron 40.0%
!! TTAGTTGATGAAGGCTTTGG+AGG + tig0024736:11306-11325 None:intergenic 40.0%
! AATTCAAGAAGGAGTGCATC+GGG - tig0024736:11330-11349 Msa1419990:intron 40.0%
TCTCCTAATGCTGTTAATGC+AGG - tig0024736:11354-11373 Msa1419990:intron 40.0%
GATCCTGCATTAACAGCATT+AGG + tig0024736:11360-11379 None:intergenic 40.0%
TCATAAGAGGACACATAGCA+TGG + tig0024736:11507-11526 None:intergenic 40.0%
! CCTCATTCCTACAAGTCTTT+TGG + tig0024736:11717-11736 None:intergenic 40.0%
CCAAAAGACTTGTAGGAATG+AGG - tig0024736:11714-11733 Msa1419990:intron 40.0%
AAAGACTTGTAGGAATGAGG+TGG - tig0024736:11717-11736 Msa1419990:intron 40.0%
ATGGTATTTGCATCCATGTC+AGG - tig0024736:12092-12111 Msa1419990:intron 40.0%
GCAGATGAGCGTAGATTATA+TGG - tig0024736:12254-12273 Msa1419990:intron 40.0%
TTGATTTCCACGGGTTTGAA+CGG - tig0024736:12393-12412 Msa1419990:intron 40.0%
TATCACAACCACAAAACCCA+GGG + tig0024736:12453-12472 None:intergenic 40.0%
TTATCACAACCACAAAACCC+AGG + tig0024736:12454-12473 None:intergenic 40.0%
GTTATCATAAGCTAGACCAG+AGG + tig0024736:13061-13080 None:intergenic 40.0%
TAGTTTGATACACAGTCCAC+AGG + tig0024736:13109-13128 None:intergenic 40.0%
ATCAAACTAACCTCCCATCA+TGG - tig0024736:13120-13139 Msa1419990:intron 40.0%
GTAGTAGTGCAATAAACCAC+AGG + tig0024736:13374-13393 None:intergenic 40.0%
! TGATTTCACGTCTTTAGGAG+CGG - tig0024736:13513-13532 Msa1419990:intron 40.0%
TCTCTTCCTCTTACAGTATG+AGG + tig0024736:13579-13598 None:intergenic 40.0%
ACAGGAGTGATTTATGCAAC+CGG - tig0024736:13955-13974 Msa1419990:intron 40.0%
GGTTTAAACAAAAAAGGGCC+GGG + tig0024736:14054-14073 None:intergenic 40.0%
CGGTTTAAACAAAAAAGGGC+CGG + tig0024736:14055-14074 None:intergenic 40.0%
AACTTGTGCCACAGCTATAA+GGG + tig0024736:14419-14438 None:intergenic 40.0%
AAACTTGTGCCACAGCTATA+AGG + tig0024736:14420-14439 None:intergenic 40.0%
ACATGTTAGGAACTTCCACT+TGG - tig0024736:14826-14845 Msa1419990:CDS 40.0%
AGAGAGATCTCGACAACTAA+TGG - tig0024736:14919-14938 Msa1419990:intron 40.0%
! ATATGTTAACCCTTTCTGGC+AGG - tig0024736:15182-15201 Msa1419990:intron 40.0%
CATATATACTCCTACTCCAC+AGG - tig0024736:15261-15280 Msa1419990:intron 40.0%
TGTAAGATAAGCTCTACCTG+TGG + tig0024736:15280-15299 None:intergenic 40.0%
TGATGAAAACTTAGGCGTAC+TGG + tig0024736:15412-15431 None:intergenic 40.0%
! GTACGCCTAAGTTTTCATCA+TGG - tig0024736:15412-15431 Msa1419990:intron 40.0%
! ATATAGGGCCCTTTCTTTTG+GGG + tig0024736:15666-15685 None:intergenic 40.0%
AGAAAGGGCCCTATATAACT+TGG - tig0024736:15670-15689 Msa1419990:CDS 40.0%
! TTTTACAACTCCCTTCTGAC+AGG - tig0024736:15914-15933 Msa1419990:CDS 40.0%
!! GAGATATTAACTTGCTCCAG+AGG + tig0024736:16102-16121 None:intergenic 40.0%
! AGATTCATATGGTCGGTTCT+TGG - tig0024736:16182-16201 Msa1419990:five_prime_UTR 40.0%
!! TGGTGGACTATAAGCTAACT+TGG - tig0024736:16227-16246 Msa1419990:five_prime_UTR 40.0%
GGTGTATTAATGTGAGTTGC+AGG - tig0024736:16248-16267 Msa1419990:five_prime_UTR 40.0%
TAGTTACCTACAAGCGATTG+AGG - tig0024736:16361-16380 Msa1419990:intron 40.0%
TGAGGCATACAGCATATTTG+GGG - tig0024736:16379-16398 Msa1419990:five_prime_UTR 40.0%
! AGAGGTTTGGTTATGACACG+TGG + tig0024736:10280-10299 None:intergenic 45.0%
! ATAGCGTTTTTAACGGTGGG+AGG + tig0024736:10325-10344 None:intergenic 45.0%
! GCGATAGCGTTTTTAACGGT+GGG + tig0024736:10328-10347 None:intergenic 45.0%
!!! GGTTTTGTTTCGGAGAAAGG+GGG + tig0024736:10386-10405 None:intergenic 45.0%
!!! GGGTTTTGTTTCGGAGAAAG+GGG + tig0024736:10387-10406 None:intergenic 45.0%
!!! TTTTTTTGGGAGGTGGTTGC+AGG - tig0024736:10573-10592 Msa1419990:CDS 45.0%
TCGACGGTGGTGAAAAATCT+CGG - tig0024736:10622-10641 Msa1419990:CDS 45.0%
!! GCAGAGAACGTTTTATTGCG+AGG - tig0024736:10724-10743 Msa1419990:intron 45.0%
CACGATTAGGGTTAGGGTTA+GGG + tig0024736:10918-10937 None:intergenic 45.0%
AAGAAGACCCAGCACGATTA+GGG + tig0024736:10930-10949 None:intergenic 45.0%
TAATCGTGCTGGGTCTTCTT+CGG - tig0024736:10930-10949 Msa1419990:CDS 45.0%
ACAGGTGCAATCTGTTGCTA+AGG - tig0024736:10972-10991 Msa1419990:CDS 45.0%
!! GGTTGTTGGTGATGATGTTG+TGG - tig0024736:11026-11045 Msa1419990:CDS 45.0%
GATGATGTTGTGGAGTATGC+TGG - tig0024736:11036-11055 Msa1419990:CDS 45.0%
TTGAGGGTTTGCAAGAATCG+AGG - tig0024736:11187-11206 Msa1419990:intron 45.0%
TGAGGGTTTGCAAGAATCGA+GGG - tig0024736:11188-11207 Msa1419990:intron 45.0%
GTTTGCAAGAATCGAGGGAA+AGG - tig0024736:11193-11212 Msa1419990:intron 45.0%
GAGGGTAATCCTGTTGTTAG+CGG - tig0024736:11243-11262 Msa1419990:intron 45.0%
! ATTCAAGAAGGAGTGCATCG+GGG - tig0024736:11331-11350 Msa1419990:intron 45.0%
CTGTTAATGCAGGATCACCA+AGG - tig0024736:11364-11383 Msa1419990:intron 45.0%
TTCACTTTCACTATGAGCCC+GGG + tig0024736:11457-11476 None:intergenic 45.0%
CTTCACTTTCACTATGAGCC+CGG + tig0024736:11458-11477 None:intergenic 45.0%
GGGCTCATAGTGAAAGTGAA+GGG - tig0024736:11457-11476 Msa1419990:intron 45.0%
TTTATATCCCCAGTTAGGCG+AGG - tig0024736:11610-11629 Msa1419990:CDS 45.0%
TTATATCCCCAGTTAGGCGA+GGG - tig0024736:11611-11630 Msa1419990:CDS 45.0%
TAAACTCGCTTGCATCATCG+CGG - tig0024736:11898-11917 Msa1419990:intron 45.0%
ATTCTGAGTCTCCGTACACT+TGG + tig0024736:12218-12237 None:intergenic 45.0%
AACGGTCTTCTCCCAAAAAG+CGG - tig0024736:12411-12430 Msa1419990:intron 45.0%
TAAAACCACCTATGGCAGAC+TGG + tig0024736:12529-12548 None:intergenic 45.0%
TTCACTAAGTCTATGCACGC+CGG - tig0024736:12619-12638 Msa1419990:intron 45.0%
! CATGAACAGCGTTGGAGATA+AGG - tig0024736:12833-12852 Msa1419990:intron 45.0%
AGCTAGACCAGAGGAGAAAT+GGG + tig0024736:13052-13071 None:intergenic 45.0%
AAGCTAGACCAGAGGAGAAA+TGG + tig0024736:13053-13072 None:intergenic 45.0%
AACTAACCTCCCATCATGGT+AGG - tig0024736:13124-13143 Msa1419990:intron 45.0%
! TAGAATCCTACCATGATGGG+AGG + tig0024736:13133-13152 None:intergenic 45.0%
GCGGTATAAATGCAACCTCA+TGG - tig0024736:13251-13270 Msa1419990:intron 45.0%
CTTGCTCACCCACTATATGA+AGG - tig0024736:13280-13299 Msa1419990:intron 45.0%
! TCATTCTGGTTACACTCCTG+TGG - tig0024736:13355-13374 Msa1419990:intron 45.0%
! GATTTCACGTCTTTAGGAGC+GGG - tig0024736:13514-13533 Msa1419990:intron 45.0%
GAACAATCACAACCCACATC+TGG + tig0024736:14025-14044 None:intergenic 45.0%
TTGTGATTGTTCCCTTCTCC+CGG - tig0024736:14033-14052 Msa1419990:intron 45.0%
ACTGAATGAAGAGCGGAAAG+TGG + tig0024736:14135-14154 None:intergenic 45.0%
CATGGCACAATGTAACTAGC+AGG + tig0024736:14170-14189 None:intergenic 45.0%
AGAATTGGCGGGGATATACT+TGG - tig0024736:14347-14366 Msa1419990:intron 45.0%
GAATTGGCGGGGATATACTT+GGG - tig0024736:14348-14367 Msa1419990:intron 45.0%
! AACCCTTTCTGGCAGGTTTA+TGG - tig0024736:15189-15208 Msa1419990:intron 45.0%
! ACCCTTTCTGGCAGGTTTAT+GGG - tig0024736:15190-15209 Msa1419990:intron 45.0%
TCCCATAAACCTGCCAGAAA+GGG + tig0024736:15194-15213 None:intergenic 45.0%
TTCCCATAAACCTGCCAGAA+AGG + tig0024736:15195-15214 None:intergenic 45.0%
ATAAGCTCTACCTGTGGAGT+AGG + tig0024736:15274-15293 None:intergenic 45.0%
TGAAAACTTAGGCGTACTGG+TGG + tig0024736:15409-15428 None:intergenic 45.0%
GGTCAACAAGGGAGTTGTAA+TGG + tig0024736:15441-15460 None:intergenic 45.0%
!! GCTAAAAGTGCCTGTCAGAA+GGG + tig0024736:15927-15946 None:intergenic 45.0%
!! AGCTAAAAGTGCCTGTCAGA+AGG + tig0024736:15928-15947 None:intergenic 45.0%
!! TGACAGGCACTTTTAGCTGA+GGG - tig0024736:15930-15949 Msa1419990:CDS 45.0%
TGATCTTGAGCTCACAGAGA+AGG - tig0024736:15965-15984 Msa1419990:CDS 45.0%
GGAAATTGAACTTGCCGTGA+TGG - tig0024736:15986-16005 Msa1419990:CDS 45.0%
!! TAACTTGCTCCAGAGGAAGA+TGG + tig0024736:16095-16114 None:intergenic 45.0%
TCTTTCCCACTTTCCATCCT+GGG + tig0024736:16290-16309 None:intergenic 45.0%
TTCTTTCCCACTTTCCATCC+TGG + tig0024736:16291-16310 None:intergenic 45.0%
TGTATGCCTCAATCGCTTGT+AGG + tig0024736:16370-16389 None:intergenic 45.0%
CAGTAGCAGACGTAAAGGAA+AGG - tig0024736:16445-16464 Msa1419990:intron 45.0%
!!! AATATTTTAATAGAATTAAA+AGG + tig0024736:13460-13479 None:intergenic 5.0%
TGGCACGTGAGATAGAGGTT+TGG + tig0024736:10293-10312 None:intergenic 50.0%
! GGCGATAGCGTTTTTAACGG+TGG + tig0024736:10329-10348 None:intergenic 50.0%
CATTGGAATCACTGCTCCCA+GGG - tig0024736:10772-10791 Msa1419990:intron 50.0%
TTATCGCGTGTTCTTGCCCT+GGG + tig0024736:10791-10810 None:intergenic 50.0%
TTTATCGCGTGTTCTTGCCC+TGG + tig0024736:10792-10811 None:intergenic 50.0%
GTTCAACGTGGTTCTTCTGC+TGG - tig0024736:10862-10881 Msa1419990:intron 50.0%
GCACGATTAGGGTTAGGGTT+AGG + tig0024736:10919-10938 None:intergenic 50.0%
AACCCTAACCCTAATCGTGC+TGG - tig0024736:10919-10938 Msa1419990:CDS 50.0%
ACCCTAACCCTAATCGTGCT+GGG - tig0024736:10920-10939 Msa1419990:CDS 50.0%
ACCCAGCACGATTAGGGTTA+GGG + tig0024736:10924-10943 None:intergenic 50.0%
GAAGAAGACCCAGCACGATT+AGG + tig0024736:10931-10950 None:intergenic 50.0%
GGATGAAGAAAGTGGAGAGG+AGG - tig0024736:10993-11012 Msa1419990:CDS 50.0%
!! GAGGAGCTTGGATTGGTTGT+TGG - tig0024736:11012-11031 Msa1419990:CDS 50.0%
AAGGCCAGTGATAGAGAACG+AGG - tig0024736:11212-11231 Msa1419990:intron 50.0%
AGGCCAGTGATAGAGAACGA+GGG - tig0024736:11213-11232 Msa1419990:intron 50.0%
AAGCCCTCGTTCTCTATCAC+TGG + tig0024736:11219-11238 None:intergenic 50.0%
GGTAATCCTGTTGTTAGCGG+TGG - tig0024736:11246-11265 Msa1419990:intron 50.0%
AATCCTGTTGTTAGCGGTGG+TGG - tig0024736:11249-11268 Msa1419990:intron 50.0%
!! GTTGATGAAGGCTTTGGAGG+TGG + tig0024736:11303-11322 None:intergenic 50.0%
AATGCAGGATCACCAAGGAG+AGG - tig0024736:11369-11388 Msa1419990:intron 50.0%
!! TGCGTGGCCTGTTGTTGTTT+CGG - tig0024736:11395-11414 Msa1419990:intron 50.0%
GTCCTAGCCGAAACAACAAC+AGG + tig0024736:11405-11424 None:intergenic 50.0%
TCACTTTCACTATGAGCCCG+GGG + tig0024736:11456-11475 None:intergenic 50.0%
CGGGCTCATAGTGAAAGTGA+AGG - tig0024736:11456-11475 Msa1419990:intron 50.0%
AACAACTCCCTCGCCTAACT+GGG + tig0024736:11621-11640 None:intergenic 50.0%
TAACAACTCCCTCGCCTAAC+TGG + tig0024736:11622-11641 None:intergenic 50.0%
AGTTAGGCGAGGGAGTTGTT+AGG - tig0024736:11621-11640 Msa1419990:CDS 50.0%
CGTATCGCGAACAAGGTCAT+TGG + tig0024736:11664-11683 None:intergenic 50.0%
ACCTTGTTCGCGATACGTGT+AGG - tig0024736:11667-11686 Msa1419990:intron 50.0%
TCCTACACGTATCGCGAACA+AGG + tig0024736:11671-11690 None:intergenic 50.0%
TGTCGCTCTCTTTCCTGACA+TGG + tig0024736:12108-12127 None:intergenic 50.0%
ACACTTGGTCTGCAACAGCA+CGG + tig0024736:12203-12222 None:intergenic 50.0%
GCTGTTGCAGACCAAGTGTA+CGG - tig0024736:12204-12223 Msa1419990:intron 50.0%
! ATGAAGGTCCCTGGGTTTTG+TGG - tig0024736:12442-12461 Msa1419990:intron 50.0%
TCATTCTGGTCACACTCCTG+TGG - tig0024736:13212-13231 Msa1419990:intron 50.0%
GTGAGCAAGAAACGTCCATG+AGG + tig0024736:13269-13288 None:intergenic 50.0%
AAACCTACGCCTGCATTTGC+TGG - tig0024736:13656-13675 Msa1419990:intron 50.0%
AACCTACGCCTGCATTTGCT+GGG - tig0024736:13657-13676 Msa1419990:intron 50.0%
CCTAAAAGCCCAGCAAATGC+AGG + tig0024736:13668-13687 None:intergenic 50.0%
!! CCTGCATTTGCTGGGCTTTT+AGG - tig0024736:13665-13684 Msa1419990:intron 50.0%
TGTGCCAATTAATCCGGCTG+TGG - tig0024736:13854-13873 Msa1419990:intron 50.0%
GTGCCAATTAATCCGGCTGT+GGG - tig0024736:13855-13874 Msa1419990:intron 50.0%
GAACCCACAGCCGGATTAAT+TGG + tig0024736:13861-13880 None:intergenic 50.0%
GAACAATCAGAACCCACAGC+CGG + tig0024736:13870-13889 None:intergenic 50.0%
ACAAAAAAGGGCCGGGAGAA+GGG + tig0024736:14047-14066 None:intergenic 50.0%
AACAAAAAAGGGCCGGGAGA+AGG + tig0024736:14048-14067 None:intergenic 50.0%
CGGGGATATACTTGGGTCTT+TGG - tig0024736:14355-14374 Msa1419990:intron 50.0%
! TAGGCGTACTGGTGGTGTAT+CGG + tig0024736:15401-15420 None:intergenic 50.0%
ACAACTCCCTTGTTGACCCA+CGG - tig0024736:15443-15462 Msa1419990:intron 50.0%
CCAAGTCCTGCACCAATTGT+GGG + tig0024736:15472-15491 None:intergenic 50.0%
CCACAATTGGTGCAGGACTT+GGG - tig0024736:15470-15489 Msa1419990:intron 50.0%
TTGGGTTCAGCTCTCTTCGT+GGG - tig0024736:15488-15507 Msa1419990:CDS 50.0%
!! CTGACAGGCACTTTTAGCTG+AGG - tig0024736:15929-15948 Msa1419990:CDS 50.0%
!! GACAGGCACTTTTAGCTGAG+GGG - tig0024736:15931-15950 Msa1419990:CDS 50.0%
! TTGCCGTGATGGAAGCTTCT+CGG - tig0024736:15997-16016 Msa1419990:CDS 50.0%
GCTTAAATGTACCACCGGCA+AGG + tig0024736:16031-16050 None:intergenic 50.0%
ATGTGAGTTGCAGGATCGTC+AGG - tig0024736:16257-16276 Msa1419990:five_prime_UTR 50.0%
AGTGATCCCAGGATGGAAAG+TGG - tig0024736:16281-16300 Msa1419990:intron 50.0%
GTGATCCCAGGATGGAAAGT+GGG - tig0024736:16282-16301 Msa1419990:intron 50.0%
TTTACGTCTGCTACTGCTGC+CGG + tig0024736:16441-16460 None:intergenic 50.0%
GAGAGTGGCACGTGAGATAG+AGG + tig0024736:10298-10317 None:intergenic 55.0%
ACGGTGGGAGGAAAAGAGAG+TGG + tig0024736:10313-10332 None:intergenic 55.0%
GGAGGAGGAAGCTGAATCGA+CGG - tig0024736:10606-10625 Msa1419990:CDS 55.0%
GCATTGGAATCACTGCTCCC+AGG - tig0024736:10771-10790 Msa1419990:intron 55.0%
GACCCAGCACGATTAGGGTT+AGG + tig0024736:10925-10944 None:intergenic 55.0%
TGCACCTGTGTAACGTGCTC+CGG + tig0024736:10961-10980 None:intergenic 55.0%
GAAAGTGGAGAGGAGGAGCT+TGG - tig0024736:11000-11019 Msa1419990:CDS 55.0%
TGGAGAGGAGGAGCTTGGAT+TGG - tig0024736:11005-11024 Msa1419990:CDS 55.0%
AGAGAACGAGGGCTTGTGTG+AGG - tig0024736:11224-11243 Msa1419990:intron 55.0%
GAGAACGAGGGCTTGTGTGA+GGG - tig0024736:11225-11244 Msa1419990:intron 55.0%
TTTGGAGGTGGAACAGGTGG+AGG + tig0024736:11291-11310 None:intergenic 55.0%
!! GAAGGCTTTGGAGGTGGAAC+AGG + tig0024736:11297-11316 None:intergenic 55.0%
!! GGCCTGTTGTTGTTTCGGCT+AGG - tig0024736:11400-11419 Msa1419990:intron 55.0%
ACAACTCCCTCGCCTAACTG+GGG + tig0024736:11620-11639 None:intergenic 55.0%
GGTCTGCAACAGCACGGAAA+AGG + tig0024736:12197-12216 None:intergenic 55.0%
GAGAAGACCGTTCAAACCCG+TGG + tig0024736:12403-12422 None:intergenic 55.0%
TGCCACTACCAGTCTGCCAT+AGG - tig0024736:12518-12537 Msa1419990:intron 55.0%
CACCTATGGCAGACTGGTAG+TGG + tig0024736:12523-12542 None:intergenic 55.0%
CACTACCAGTCTGCCATAGG+TGG - tig0024736:12521-12540 Msa1419990:intron 55.0%
AAATTCATGCTGCCAGCCCC+AGG + tig0024736:12649-12668 None:intergenic 55.0%
! ACGTCTTTAGGAGCGGGAGA+GGG - tig0024736:13520-13539 Msa1419990:intron 55.0%
TTCTGATTGTTCCCCTCGCC+CGG - tig0024736:13878-13897 Msa1419990:intron 55.0%
ACTAAATATGGGCCGGGCGA+GGG + tig0024736:13893-13912 None:intergenic 55.0%
AACTAAATATGGGCCGGGCG+AGG + tig0024736:13894-13913 None:intergenic 55.0%
CCCACAATTGGTGCAGGACT+TGG - tig0024736:15469-15488 Msa1419990:intron 55.0%
CCCAAGTCCTGCACCAATTG+TGG + tig0024736:15473-15492 None:intergenic 55.0%
CTTGGGTTCAGCTCTCTTCG+TGG - tig0024736:15487-15506 Msa1419990:CDS 55.0%
TGGGTTCAGCTCTCTTCGTG+GGG - tig0024736:15489-15508 Msa1419990:CDS 55.0%
!! AGGCACTTTTAGCTGAGGGG+CGG - tig0024736:15934-15953 Msa1419990:CDS 55.0%
! TGCCGTGATGGAAGCTTCTC+GGG - tig0024736:15998-16017 Msa1419990:CDS 55.0%
AGCCCGAGAAGCTTCCATCA+CGG + tig0024736:16003-16022 None:intergenic 55.0%
TCTCGGGCTGAATACCTTGC+CGG - tig0024736:16014-16033 Msa1419990:CDS 55.0%
ACTGCTGAGCCATCTTCCTC+TGG - tig0024736:16083-16102 Msa1419990:CDS 55.0%
GATCGTCAGGTAGTGATCCC+AGG - tig0024736:16270-16289 Msa1419990:intron 55.0%
GTCAGGTAGTGATCCCAGGA+TGG - tig0024736:16274-16293 Msa1419990:intron 55.0%
GGCAGCAGTAGCAGACGTAA+AGG - tig0024736:16440-16459 Msa1419990:intron 55.0%
TGGGAGGTGGTTGCAGGTTG+CGG - tig0024736:10579-10598 Msa1419990:CDS 60.0%
GTGGTTGCAGGTTGCGGTTG+CGG - tig0024736:10585-10604 Msa1419990:CDS 60.0%
GGAGGAAGCTGAATCGACGG+TGG - tig0024736:10609-10628 Msa1419990:CDS 60.0%
CCACCACCACCGCTAACAAC+AGG + tig0024736:11255-11274 None:intergenic 60.0%
! CCTGTTGTTAGCGGTGGTGG+TGG - tig0024736:11252-11271 Msa1419990:intron 60.0%
!! GGCTTTGGAGGTGGAACAGG+TGG + tig0024736:11294-11313 None:intergenic 60.0%
CACCAAGGAGAGGATCTGCG+TGG - tig0024736:11379-11398 Msa1419990:intron 60.0%
GATGAAGGTCGAGACCCAGC+AGG + tig0024736:11432-11451 None:intergenic 60.0%
GGTCTCGACCTTCATCTCCC+CGG - tig0024736:11436-11455 Msa1419990:intron 60.0%
GTCTCGACCTTCATCTCCCC+GGG - tig0024736:11437-11456 Msa1419990:intron 60.0%
CTATGAGCCCGGGGAGATGA+AGG + tig0024736:11447-11466 None:intergenic 60.0%
TCTATGCACGCCGGAATGCC+TGG - tig0024736:12628-12647 Msa1419990:intron 60.0%
CTATGCACGCCGGAATGCCT+GGG - tig0024736:12629-12648 Msa1419990:intron 60.0%
TATGCACGCCGGAATGCCTG+GGG - tig0024736:12630-12649 Msa1419990:intron 60.0%
CAGCTGGCCCATTTCTCCTC+TGG - tig0024736:13042-13061 Msa1419990:intron 60.0%
! CACGTCTTTAGGAGCGGGAG+AGG - tig0024736:13519-13538 Msa1419990:intron 60.0%
AGCCCAGCAAATGCAGGCGT+AGG + tig0024736:13662-13681 None:intergenic 60.0%
CTAAATATGGGCCGGGCGAG+GGG + tig0024736:13892-13911 None:intergenic 60.0%
CACCAATTGTGGGACGCCGT+GGG + tig0024736:15462-15481 None:intergenic 60.0%
AACTTGACGGCTGACGCTGC+TGG - tig0024736:15890-15909 Msa1419990:CDS 60.0%
GTTGCAGGTTGCGGTTGCGG+AGG - tig0024736:10588-10607 Msa1419990:CDS 65.0%
GTGCTGGGTCTTCTTCGGCC+CGG - tig0024736:10935-10954 Msa1419990:CDS 65.0%
CTGTGTAACGTGCTCCGGCC+GGG + tig0024736:10956-10975 None:intergenic 65.0%
CCTGTGTAACGTGCTCCGGC+CGG + tig0024736:10957-10976 None:intergenic 65.0%
GGTGGAACAGGTGGAGGTGG+AGG + tig0024736:11285-11304 None:intergenic 65.0%
GGAGGTGGAACAGGTGGAGG+TGG + tig0024736:11288-11307 None:intergenic 65.0%
GGCCACGCAGATCCTCTCCT+TGG + tig0024736:11384-11403 None:intergenic 65.0%
TCGGCTAGGACTTCGCCTGC+TGG - tig0024736:11414-11433 Msa1419990:intron 65.0%
CGGCTAGGACTTCGCCTGCT+GGG - tig0024736:11415-11434 Msa1419990:intron 65.0%
GGGACGCCGTGGGTCAACAA+GGG + tig0024736:15452-15471 None:intergenic 65.0%
TGGGACGCCGTGGGTCAACA+AGG + tig0024736:15453-15472 None:intergenic 65.0%
GACCCACGGCGTCCCACAAT+TGG - tig0024736:15457-15476 Msa1419990:intron 65.0%
GCACCAATTGTGGGACGCCG+TGG + tig0024736:15463-15482 None:intergenic 65.0%
CGGCGTCCCACAATTGGTGC+AGG - tig0024736:15463-15482 Msa1419990:intron 65.0%
CGGGCTGAATACCTTGCCGG+TGG - tig0024736:16017-16036 Msa1419990:CDS 65.0%
GCAGGTTGCGGTTGCGGAGG+AGG - tig0024736:10591-10610 Msa1419990:CDS 70.0%
TGGGTCTTCTTCGGCCCGGC+CGG - tig0024736:10939-10958 Msa1419990:CDS 70.0%
CCGGCCGGAGCACGTTACAC+AGG - tig0024736:10954-10973 Msa1419990:CDS 70.0%
GCTGCCAGCCCCAGGCATTC+CGG + tig0024736:12641-12660 None:intergenic 70.0%
CACGCCGGAATGCCTGGGGC+TGG - tig0024736:12634-12653 Msa1419990:intron 75.0%
Chromosome Type Strat End Strand Name
tig0024736 gene 10262 16750 10262 ID=Msa1419990;Name=Msa1419990
tig0024736 mRNA 10262 16750 10262 ID=Msa1419990-mRNA-1;Parent=Msa1419990;Name=Msa1419990-mRNA-1;_AED=0.15;_eAED=0.15;_QI=373|0.87|1|1|0.75|0.66|9|272|511
tig0024736 exon 10262 10742 10262 ID=Msa1419990-mRNA-1:exon:1239;Parent=Msa1419990-mRNA-1
tig0024736 exon 10902 11076 10902 ID=Msa1419990-mRNA-1:exon:1238;Parent=Msa1419990-mRNA-1
tig0024736 exon 11502 11647 11502 ID=Msa1419990-mRNA-1:exon:1237;Parent=Msa1419990-mRNA-1
tig0024736 exon 11730 11808 11730 ID=Msa1419990-mRNA-1:exon:1236;Parent=Msa1419990-mRNA-1
tig0024736 exon 13405 13482 13405 ID=Msa1419990-mRNA-1:exon:1235;Parent=Msa1419990-mRNA-1
tig0024736 exon 14737 14898 14737 ID=Msa1419990-mRNA-1:exon:1234;Parent=Msa1419990-mRNA-1
tig0024736 exon 15479 16284 15479 ID=Msa1419990-mRNA-1:exon:1233;Parent=Msa1419990-mRNA-1
tig0024736 exon 16369 16417 16369 ID=Msa1419990-mRNA-1:exon:1232;Parent=Msa1419990-mRNA-1
tig0024736 exon 16546 16750 16546 ID=Msa1419990-mRNA-1:exon:1231;Parent=Msa1419990-mRNA-1
tig0024736 five_prime_UTR 16546 16750 16546 ID=Msa1419990-mRNA-1:five_prime_utr;Parent=Msa1419990-mRNA-1
tig0024736 five_prime_UTR 16369 16417 16369 ID=Msa1419990-mRNA-1:five_prime_utr;Parent=Msa1419990-mRNA-1
tig0024736 five_prime_UTR 16166 16284 16166 ID=Msa1419990-mRNA-1:five_prime_utr;Parent=Msa1419990-mRNA-1
tig0024736 CDS 15479 16165 15479 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 14737 14898 14737 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 13405 13482 13405 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 11730 11808 11730 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 11502 11647 11502 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 10902 11076 10902 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 CDS 10534 10742 10534 ID=Msa1419990-mRNA-1:cds;Parent=Msa1419990-mRNA-1
tig0024736 three_prime_UTR 10262 10533 10262 ID=Msa1419990-mRNA-1:three_prime_utr;Parent=Msa1419990-mRNA-1
Gene Sequence

>Msa1419990

ATGACTCGTATCTATGTTCAACGTGGTTCTTCTGCTGGTAGCAATAGTACTCAGAACACTAATTCTAACCCTAACCCTAACCCTAATCGTGCTGGGTCTTCTTCGGCCCGGCCGGAGCACGTTACACAGGTGCAATCTGTTGCTAAGGATGAAGAAAGTGGAGAGGAGGAGCTTGGATTGGTTGTTGGTGATGATGTTGTGGAGTATGCTGGGAGTAGTAATAGGGCAAAGAGTGATGACCCTTTAATGGAAAGTCTTCATTTTGAGGAGAATGATACGCATACTCCTTTAGGAAATGAAGTTTTCGTTGATCTTCCTGGGAAAGATGTTAAAGAAGAGATTGAGGGTTTGCAAGAATCGAGGGAAAGGCCAGTGATAGAGAACGAGGGCTTGTGTGAGGGTAATCCTGTTGTTAGCGGTGGTGGTGGTTCGTCTCCTCCACCTCCACCTGTTCCACCTCCAAAGCCTTCATCAACTAACTTAAATTCAAGAAGGAGTGCATCGGGGTCTCCTAATGCTGTTAATGCAGGATCACCAAGGAGAGGATCTGCGTGGCCTGTTGTTGTTTCGGCTAGGACTTCGCCTGCTGGGTCTCGACCTTCATCTCCCCGGGCTCATAGTGAAAGTGAAGGGTATAATAGTGCTGATGAACAGAATCCATGCTATGTGTCCTCTTATGATGATGTAGAAAGAGAGCGACAGTTTGAAATTGATATTAGAAGGGTAAAAGGCTTTGAAGTAAAAAGAATGTCAGAGGATGGGAATTGCCTTTTCCGTGCTGTTGCAGACCAAGTGTACGGAGACTCAGAATTGTATGATTTGGTCAGGCAGATGAGCGTAGATTATATGGAGCGGGAGAGGGATCACTTTTCTCAATTTATAACAGAAGGTTTTACCTCATACTGTAAGAGGAAGAGAAGAGATAAGGTTTATGGGAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGACCTATTCATATATACTCCTACTCCACAGAGCCTATCAATACATTTCATGGAAGTTATGACACCGATACACCACCAGTACGCCTAAGTTTTCATCATGGTAACCATTACAACTCCCTTGTTGACCCACGGCGTCCCACAATTGGTGCAGGACTTGGGTTCAGCTCTCTTCGTGGGGCACTTTTAGCTGAGGGGCGGTTTTACTCTGATCTTGAGCTCACAGAGAAGGAAATTGAACTTGCCGTGATGGAAGCTTCTCGGGCTGAATACCTTGCCGGTGGTACATTTAAGCAACAACTTGGCAATCGAGAGTCGTCTACGTCAACTGCTGAGCCATCTTCCTCTGGAGCAAGATCGTCAGGTAGTGATCCCAGGATGGAAAGTGGGAAAGAAAATAATTCTAATCTTAGCAGCAGCATGAATATGTTACTGTCGATGGGATTTAGTTACCTACAAGCGATTGAGGCATACAGCATATTTGGGGATGATGTTGATTCTATGATTTGTTACTTGTTGGAAACCGGCAGCAGTAGCAGACGTAAAGGAAAGGCTACTGAATGA

Protein sequence

>Msa1419990

MTRIYVQRGSSAGSNSTQNTNSNPNPNPNRAGSSSARPEHVTQVQSVAKDEESGEEELGLVVGDDVVEYAGSSNRAKSDDPLMESLHFEENDTHTPLGNEVFVDLPGKDVKEEIEGLQESRERPVIENEGLCEGNPVVSGGGGSSPPPPPVPPPKPSSTNLNSRRSASGSPNAVNAGSPRRGSAWPVVVSARTSPAGSRPSSPRAHSESEGYNSADEQNPCYVSSYDDVERERQFEIDIRRVKGFEVKRMSEDGNCLFRAVADQVYGDSELYDLVRQMSVDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSTEPINTFHGSYDTDTPPVRLSFHHGNHYNSLVDPRRPTIGAGLGFSSLRGALLAEGRFYSDLELTEKEIELAVMEASRAEYLAGGTFKQQLGNRESSTSTAEPSSSGARSSGSDPRMESGKENNSNLSSSMNMLLSMGFSYLQAIEAYSIFGDDVDSMICYLLETGSSSRRKGKATE*