AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566010 MtrunA17_Chr8g0380471 97.077 479 14 0 1 479 1 479 0.0 963
Msa0566010 MtrunA17_Chr8g0388921 53.191 470 213 2 13 475 7 476 0.0 520
Msa0566010 MtrunA17_Chr8g0380931 38.612 461 268 8 22 474 50 503 1.32e-112 342
Msa0566010 MtrunA17_Chr5g0443731 38.288 444 270 4 34 475 29 470 1.54e-108 330
Msa0566010 MtrunA17_Chr5g0443401 38.053 452 267 8 31 477 35 478 7.50e-106 323
Msa0566010 MtrunA17_Chr3g0107511 37.421 473 283 8 11 475 9 476 1.60e-104 320
Msa0566010 MtrunA17_Chr3g0107501 36.667 450 273 6 33 475 32 476 3.99e-102 314
Msa0566010 MtrunA17_Chr8g0369791 32.708 480 298 13 1 473 1 462 9.29e-77 248
Msa0566010 MtrunA17_Chr5g0403931 33.333 477 298 12 9 474 11 478 1.04e-76 248
Msa0566010 MtrunA17_Chr7g0226771 32.305 486 308 11 1 479 2 473 1.79e-75 244
Msa0566010 MtrunA17_Chr5g0408181 32.780 482 297 14 1 475 1 462 1.61e-73 239
Msa0566010 MtrunA17_Chr4g0044851 30.512 449 295 9 29 473 32 467 1.01e-65 219
Msa0566010 MtrunA17_Chr5g0397971 27.208 419 295 6 34 448 31 443 2.43e-61 207
Msa0566010 MtrunA17_Chr1g0153371 28.450 471 322 7 8 472 4 465 3.68e-60 204
Msa0566010 MtrunA17_Chr3g0113321 29.978 457 297 15 25 471 20 463 1.71e-59 203
Msa0566010 MtrunA17_Chr5g0400421 28.898 481 326 10 6 473 10 487 3.27e-59 202
Msa0566010 MtrunA17_Chr8g0341951 28.194 454 307 11 4 448 3 446 9.09e-59 201
Msa0566010 MtrunA17_Chr3g0141801 28.728 456 302 11 30 473 37 481 1.23e-58 201
Msa0566010 MtrunA17_Chr4g0044841 29.241 448 299 10 31 473 35 469 1.40e-57 197
Msa0566010 MtrunA17_Chr8g0372411 27.640 445 303 9 35 471 40 473 1.68e-57 197
Msa0566010 MtrunA17_Chr7g0219961 29.978 457 290 15 27 474 26 461 1.68e-56 194
Msa0566010 MtrunA17_Chr3g0078411 27.922 462 294 11 27 474 26 462 3.42e-56 193
Msa0566010 MtrunA17_Chr1g0164371 29.614 466 312 9 12 473 20 473 7.56e-56 193
Msa0566010 MtrunA17_Chr2g0293411 28.667 450 315 5 30 474 37 485 1.21e-54 190
Msa0566010 MtrunA17_Chr6g0455461 27.489 462 296 10 27 474 26 462 1.33e-54 189
Msa0566010 MtrunA17_Chr8g0373441 31.750 400 258 10 14 406 13 404 1.90e-54 188
Msa0566010 MtrunA17_Chr8g0372711 28.315 445 302 6 37 474 49 483 1.98e-52 184
Msa0566010 MtrunA17_Chr8g0381541 26.371 474 335 8 7 467 8 480 3.98e-52 183
Msa0566010 MtrunA17_Chr2g0293421 26.754 456 329 5 27 479 38 491 1.49e-51 182
Msa0566010 MtrunA17_Chr8g0339861 26.947 475 322 9 11 468 12 478 7.76e-51 180
Msa0566010 MtrunA17_Chr8g0381571 27.069 447 312 8 7 440 8 453 4.30e-50 177
Msa0566010 MtrunA17_Chr5g0400411 27.917 480 331 9 6 473 10 486 2.15e-48 173
Msa0566010 MtrunA17_Chr6g0478161 24.587 484 334 11 12 477 21 491 1.33e-46 169
Msa0566010 MtrunA17_Chr3g0089361 26.126 444 317 7 34 474 40 475 6.25e-45 164
Msa0566010 MtrunA17_Chr3g0089351 26.119 402 287 7 74 474 1 393 2.17e-42 155
Msa0566010 MtrunA17_Chr5g0404861 36.552 145 88 2 333 475 16 158 2.58e-26 104
Msa0566010 MtrunA17_Chr0c19g0493771 31.937 191 120 3 268 452 436 622 4.22e-25 108
Msa0566010 MtrunA17_Chr8g0354531 26.382 398 234 16 116 474 266 643 2.43e-23 103
Msa0566010 MtrunA17_Chr8g0381551 24.688 320 228 7 7 314 8 326 3.16e-23 100
Msa0566010 MtrunA17_Chr8g0334891 24.449 454 293 11 26 453 30 459 1.15e-22 100
Msa0566010 MtrunA17_Chr2g0313821 27.027 370 232 12 110 450 129 489 4.85e-22 99.0
Msa0566010 MtrunA17_Chr6g0463541 39.423 104 62 1 368 471 3 105 9.65e-22 90.1
Msa0566010 MtrunA17_Chr7g0260821 22.967 492 303 20 32 474 37 501 1.02e-21 97.8
Msa0566010 MtrunA17_Chr2g0307291 25.385 390 254 11 114 474 135 516 2.21e-20 94.0
Msa0566010 MtrunA17_Chr5g0437001 38.889 108 63 2 339 443 1 108 3.96e-20 87.4
Msa0566010 MtrunA17_Chr1g0198191 24.609 512 295 19 11 464 21 499 4.55e-20 93.2
Msa0566010 MtrunA17_Chr8g0334941 26.224 286 184 7 184 453 30 304 5.24e-20 90.9
Msa0566010 MtrunA17_Chr1g0179811 27.138 269 169 7 224 474 278 537 6.40e-20 92.8
Msa0566010 MtrunA17_Chr7g0260831 21.901 484 316 19 32 473 36 499 1.15e-19 91.7
Msa0566010 MtrunA17_Chr2g0307301 24.938 401 238 11 114 477 135 509 1.16e-19 91.7
Msa0566010 MtrunA17_Chr6g0457421 27.972 286 179 11 207 475 231 506 1.66e-19 91.3
Msa0566010 MtrunA17_Chr3g0128461 29.297 256 159 9 230 474 278 522 2.20e-19 90.9
Msa0566010 MtrunA17_Chr5g0401691 28.571 224 148 4 234 448 256 476 2.51e-19 90.9
Msa0566010 MtrunA17_Chr4g0056951 31.674 221 137 7 237 448 262 477 2.98e-19 90.5
Msa0566010 MtrunA17_Chr7g0215181 25.641 273 184 7 215 475 243 508 3.21e-19 90.5
Msa0566010 MtrunA17_Chr2g0313791 27.875 287 168 10 215 474 235 509 3.26e-19 90.5
Msa0566010 MtrunA17_Chr5g0404881 28.502 207 138 6 27 228 28 229 3.85e-19 86.7
Msa0566010 MtrunA17_Chr8g0336361 25.826 333 173 12 199 473 239 555 4.55e-19 90.1
Msa0566010 MtrunA17_Chr1g0203151 27.170 265 169 8 224 475 257 510 6.62e-19 89.4
Msa0566010 MtrunA17_Chr6g0472221 28.626 262 165 8 227 475 273 525 7.06e-19 89.4
Msa0566010 MtrunA17_Chr1g0203141 26.415 265 171 8 224 475 261 514 7.08e-19 89.4
Msa0566010 MtrunA17_Chr2g0286091 22.961 466 320 13 30 467 37 491 1.36e-18 88.6
Msa0566010 MtrunA17_Chr4g0000151 35.514 107 69 0 359 465 25 131 1.62e-18 82.0
Msa0566010 MtrunA17_Chr8g0354571 26.173 405 237 16 111 474 139 522 2.75e-18 87.4
Msa0566010 MtrunA17_Chr4g0000171 23.827 277 206 4 34 308 43 316 3.49e-18 85.9
Msa0566010 MtrunA17_Chr3g0089381 28.646 192 131 4 179 369 4 190 4.28e-18 83.2
Msa0566010 MtrunA17_Chr1g0161671 23.891 293 217 4 27 314 20 311 6.72e-18 84.7
Msa0566010 MtrunA17_Chr2g0288661 23.724 392 258 11 114 474 135 516 1.30e-17 85.5
Msa0566010 MtrunA17_Chr1g0160861 32.370 173 109 4 283 450 137 306 1.78e-17 83.6
Msa0566010 MtrunA17_Chr5g0429651 26.408 284 180 10 217 475 228 507 1.84e-17 85.1
Msa0566010 MtrunA17_Chr2g0313751 25.995 377 219 11 114 450 160 516 2.40e-17 84.7
Msa0566010 MtrunA17_Chr1g0160851 32.164 171 108 4 285 450 298 465 3.88e-17 84.0
Msa0566010 MtrunA17_Chr7g0235261 26.761 284 173 10 209 473 240 507 6.22e-17 83.2
Msa0566010 MtrunA17_Chr2g0313781 26.573 286 173 10 215 474 252 526 8.90e-17 82.8
Msa0566010 MtrunA17_Chr2g0313761 25.333 375 224 10 114 450 128 484 1.10e-16 82.4
Msa0566010 MtrunA17_Chr4g0000161 25.175 286 207 5 26 308 35 316 1.12e-16 81.3
Msa0566010 MtrunA17_Chr4g0035921 26.641 259 161 7 217 450 227 481 1.67e-16 82.0
Msa0566010 MtrunA17_Chr4g0057001 29.412 221 145 7 237 450 268 484 1.81e-16 82.0
Msa0566010 MtrunA17_Chr2g0313831 24.565 517 329 19 6 474 11 514 2.26e-16 81.6
Msa0566010 MtrunA17_Chr8g0381561 30.909 110 76 0 338 447 2 111 2.89e-16 75.1
Msa0566010 MtrunA17_Chr4g0004601 25.763 295 181 9 203 473 248 528 3.05e-16 81.3
Msa0566010 MtrunA17_Chr2g0313801 23.664 393 257 12 114 474 133 514 3.50e-16 80.9
Msa0566010 MtrunA17_Chr1g0193811 26.354 277 178 9 217 475 247 515 4.11e-16 80.9
Msa0566010 MtrunA17_Chr4g0053621 26.761 213 150 5 245 455 262 470 5.14e-16 80.5
Msa0566010 MtrunA17_Chr1g0184421 26.667 255 150 9 227 466 252 484 6.60e-16 80.1
Msa0566010 MtrunA17_Chr8g0354511 25.266 376 228 12 111 450 139 497 8.20e-16 79.7
Msa0566010 MtrunA17_Chr4g0014051 24.808 391 250 13 114 477 146 519 8.51e-16 79.7
Msa0566010 MtrunA17_Chr5g0431511 26.515 264 175 7 198 450 215 470 9.52e-16 79.7
Msa0566010 MtrunA17_Chr6g0463551 30.380 158 98 3 217 367 33 185 9.54e-16 75.9
Msa0566010 MtrunA17_Chr5g0436981 33.094 139 89 4 30 166 24 160 9.64e-16 75.5
Msa0566010 MtrunA17_Chr4g0011851 30.811 185 114 5 283 460 14 191 1.07e-15 76.3
Msa0566010 MtrunA17_Chr8g0346261 26.549 226 150 5 231 448 296 513 1.50e-15 79.3
Msa0566010 MtrunA17_Chr3g0104351 24.031 387 252 13 108 458 116 496 1.50e-15 79.0
Msa0566010 MtrunA17_Chr4g0038271 26.016 246 165 6 221 451 291 534 2.12e-15 78.6
Msa0566010 MtrunA17_Chr5g0403321 30.455 220 134 7 241 450 264 474 2.43e-15 78.2
Msa0566010 MtrunA17_Chr5g0401681 27.919 197 133 5 255 448 269 459 2.55e-15 78.2
Msa0566010 MtrunA17_Chr1g0184461 23.617 470 287 19 41 466 43 484 2.77e-15 78.2
Msa0566010 MtrunA17_Chr2g0280081 29.412 187 123 3 271 448 787 973 3.02e-15 79.0
Msa0566010 MtrunA17_Chr2g0280081 28.079 203 132 4 271 459 286 488 3.92e-12 68.9
Msa0566010 MtrunA17_Chr2g0280011 29.651 172 112 3 286 448 9 180 3.68e-15 74.3
Msa0566010 MtrunA17_Chr2g0313771 23.715 506 302 18 6 450 14 496 3.95e-15 77.8
Msa0566010 MtrunA17_Chr8g0362731 27.397 219 137 6 268 477 194 399 3.97e-15 77.0
Msa0566010 MtrunA17_Chr8g0339311 26.459 257 161 7 242 476 279 529 4.79e-15 77.4
Msa0566010 MtrunA17_Chr2g0314731 27.848 237 157 6 243 473 255 483 4.97e-15 77.4
Msa0566010 MtrunA17_Chr8g0339331 25.379 264 171 9 224 473 249 500 5.41e-15 77.4
Msa0566010 MtrunA17_Chr1g0204271 25.828 302 191 11 197 471 206 501 5.52e-15 77.4
Msa0566010 MtrunA17_Chr6g0458561 30.000 200 123 5 281 473 324 513 6.02e-15 77.4
Msa0566010 MtrunA17_Chr5g0403331 30.233 172 110 4 285 450 305 472 7.77e-15 76.6
Msa0566010 MtrunA17_Chr7g0235551 27.049 244 161 6 223 456 244 480 8.00e-15 76.6
Msa0566010 MtrunA17_Chr1g0174441 26.953 256 167 6 211 450 246 497 9.56e-15 76.6
Msa0566010 MtrunA17_Chr8g0364651 26.577 222 152 4 241 454 254 472 1.14e-14 76.3
Msa0566010 MtrunA17_Chr4g0039391 27.004 237 155 6 234 455 242 475 1.31e-14 76.3
Msa0566010 MtrunA17_Chr1g0176831 25.974 231 158 4 248 473 291 513 1.32e-14 76.3
Msa0566010 MtrunA17_Chr8g0373431 47.541 61 31 1 414 474 5 64 1.43e-14 68.6
Msa0566010 MtrunA17_Chr2g0313811 25.161 310 199 10 165 450 201 501 1.79e-14 75.9
Msa0566010 MtrunA17_Chr5g0403351 25.792 221 146 6 241 450 258 471 1.82e-14 75.5
Msa0566010 MtrunA17_Chr5g0446131 26.587 252 163 6 217 450 240 487 1.88e-14 75.5
Msa0566010 MtrunA17_Chr1g0205361 30.409 171 111 3 285 450 298 465 2.38e-14 75.1
Msa0566010 MtrunA17_Chr2g0296651 27.805 205 143 4 248 451 262 462 2.54e-14 75.1
Msa0566010 MtrunA17_Chr1g0174481 27.686 242 156 6 222 450 235 470 3.16e-14 74.7
Msa0566010 MtrunA17_Chr3g0101611 26.756 299 194 10 174 451 178 472 3.18e-14 74.7
Msa0566010 MtrunA17_Chr1g0164321 24.896 241 160 4 228 451 285 521 4.72e-14 74.3
Msa0566010 MtrunA17_Chr1g0156101 27.344 256 164 8 213 450 228 479 5.20e-14 74.3
Msa0566010 MtrunA17_Chr1g0174461 26.389 216 145 6 240 447 263 472 5.31e-14 74.3
Msa0566010 MtrunA17_Chr2g0314721 26.407 231 157 5 248 473 272 494 6.28e-14 73.9
Msa0566010 MtrunA17_Chr8g0351421 26.190 252 167 7 241 475 260 509 6.33e-14 73.9
Msa0566010 MtrunA17_Chr4g0011961 29.825 171 112 3 285 450 296 463 6.38e-14 73.9
Msa0566010 MtrunA17_Chr1g0174451 25.581 258 174 4 207 450 223 476 6.53e-14 73.9
Msa0566010 MtrunA17_Chr8g0362481 27.459 244 159 7 222 450 166 406 7.16e-14 73.6
Msa0566010 MtrunA17_Chr4g0020041 26.446 242 156 7 221 450 239 470 7.35e-14 73.6
Msa0566010 MtrunA17_Chr7g0265611 26.754 228 149 5 235 450 264 485 7.36e-14 73.9
Msa0566010 MtrunA17_Chr2g0280071 28.042 189 127 3 271 450 319 507 7.64e-14 73.9
Msa0566010 MtrunA17_Chr4g0013471 22.789 294 217 6 34 325 43 328 9.34e-14 72.8
Msa0566010 MtrunA17_Chr4g0063221 26.354 277 178 9 215 471 244 514 9.73e-14 73.6
Msa0566010 MtrunA17_Chr6g0463621 29.609 179 112 4 286 455 1 174 1.11e-13 70.1
Msa0566010 MtrunA17_Chr4g0026941 25.287 261 176 8 221 473 287 536 1.49e-13 72.8
Msa0566010 MtrunA17_Chr4g0052861 27.155 232 157 6 232 456 240 466 1.61e-13 72.8
Msa0566010 MtrunA17_Chr4g0011901 27.530 247 163 7 221 460 235 472 1.82e-13 72.4
Msa0566010 MtrunA17_Chr2g0280121 28.125 224 144 6 266 475 288 508 2.10e-13 72.4
Msa0566010 MtrunA17_Chr5g0446161 27.962 211 137 4 250 450 263 468 2.20e-13 72.4
Msa0566010 MtrunA17_Chr8g0351461 25.296 253 168 8 241 475 259 508 2.56e-13 72.0
Msa0566010 MtrunA17_Chr1g0161661 35.443 79 51 0 387 465 11 89 3.87e-13 65.5
Msa0566010 MtrunA17_Chr7g0248991 30.345 145 97 2 268 412 218 358 3.99e-13 70.9
Msa0566010 MtrunA17_Chr7g0255131 26.446 242 157 8 249 474 270 506 4.21e-13 71.2
Msa0566010 MtrunA17_Chr5g0396521 25.792 221 119 6 267 450 330 542 4.23e-13 71.6
Msa0566010 MtrunA17_Chr6g0451781 28.936 235 146 9 224 441 291 521 4.67e-13 71.2
Msa0566010 MtrunA17_Chr3g0101731 24.691 243 171 6 217 450 230 469 5.53e-13 70.9
Msa0566010 MtrunA17_Chr4g0058281 25.926 216 152 3 240 450 269 481 5.79e-13 70.9
Msa0566010 MtrunA17_Chr6g0451811 30.636 173 102 7 282 441 2 169 5.85e-13 68.2
Msa0566010 MtrunA17_Chr6g0463791 30.114 176 110 3 288 455 300 470 6.79e-13 70.9
Msa0566010 MtrunA17_Chr8g0351441 25.296 253 168 8 241 475 259 508 7.00e-13 70.9
Msa0566010 MtrunA17_Chr8g0362701 26.277 274 180 8 217 475 230 496 7.96e-13 70.5
Msa0566010 MtrunA17_Chr1g0162811 28.324 173 117 2 282 450 299 468 8.27e-13 70.5
Msa0566010 MtrunA17_Chr1g0174431 29.379 177 111 4 285 450 1 174 9.14e-13 67.4
Msa0566010 MtrunA17_Chr8g0372251 24.454 229 148 6 239 450 253 473 1.17e-12 70.1
Msa0566010 MtrunA17_Chr8g0387001 26.104 249 145 8 227 451 246 479 1.27e-12 69.7
Msa0566010 MtrunA17_Chr8g0351801 28.022 182 114 3 283 450 308 486 1.31e-12 69.7
Msa0566010 MtrunA17_Chr5g0419691 30.857 175 111 4 300 469 312 481 1.33e-12 69.7
Msa0566010 MtrunA17_Chr5g0405001 24.506 253 163 6 220 454 241 483 1.59e-12 69.7
Msa0566010 MtrunA17_Chr7g0258211 26.630 184 113 3 283 450 303 480 1.60e-12 69.7
Msa0566010 MtrunA17_Chr4g0046331 27.374 179 112 5 288 453 304 477 1.65e-12 69.7
Msa0566010 MtrunA17_Chr7g0218601 26.996 263 161 10 220 470 239 482 1.80e-12 69.3
Msa0566010 MtrunA17_Chr6g0463801 28.718 195 125 5 264 450 277 465 2.91e-12 68.6
Msa0566010 MtrunA17_Chr4g0011941 29.240 171 113 4 285 450 1 168 3.29e-12 65.5
Msa0566010 MtrunA17_Chr1g0174471 27.397 219 146 4 240 450 278 491 3.48e-12 68.6
Msa0566010 MtrunA17_Chr5g0409051 27.179 195 122 5 269 450 292 479 3.75e-12 68.6
Msa0566010 MtrunA17_Chr5g0400391 33.333 84 56 0 389 472 1 84 3.81e-12 62.8
Msa0566010 MtrunA17_Chr2g0296661 29.016 193 132 4 258 449 277 465 5.69e-12 67.8
Msa0566010 MtrunA17_Chr6g0451741 30.303 231 138 10 224 438 279 502 6.61e-12 67.8
Msa0566010 MtrunA17_Chr8g0387101 27.225 191 129 3 271 451 287 477 7.28e-12 67.4
Msa0566010 MtrunA17_Chr1g0161641 34.211 76 50 0 372 447 13 88 1.17e-11 60.8
Msa0566010 MtrunA17_Chr6g0466941 27.778 216 137 8 241 441 271 482 1.48e-11 66.6
Msa0566010 MtrunA17_Chr4g0046321 27.119 177 113 5 288 453 304 475 1.49e-11 66.6
Msa0566010 MtrunA17_Chr4g0052881 27.136 199 140 3 251 448 266 460 1.56e-11 66.2
Msa0566010 MtrunA17_Chr7g0218611 24.370 238 166 5 219 449 237 467 1.56e-11 66.2
Msa0566010 MtrunA17_Chr3g0101721 27.311 238 159 7 221 450 240 471 1.63e-11 66.2
Msa0566010 MtrunA17_Chr5g0445531 25.368 272 183 8 195 450 200 467 1.68e-11 66.2
Msa0566010 MtrunA17_Chr4g0046351 26.257 179 116 5 288 455 304 477 1.76e-11 66.2
Msa0566010 MtrunA17_Chr8g0348751 23.954 263 173 10 232 473 251 507 2.14e-11 66.2
Msa0566010 MtrunA17_Chr8g0354541 29.508 183 113 6 301 474 1 176 2.19e-11 62.8
Msa0566010 MtrunA17_Chr1g0205371 32.164 171 108 3 285 450 299 466 4.25e-11 65.1
Msa0566010 MtrunA17_Chr3g0101691 25.000 240 166 5 221 450 238 473 4.46e-11 65.1
Msa0566010 MtrunA17_Chr8g0382901 27.966 236 155 8 224 450 214 443 4.85e-11 65.5
Msa0566010 MtrunA17_Chr2g0280041 28.042 189 127 3 271 450 318 506 6.66e-11 64.7
Msa0566010 MtrunA17_Chr1g0178971 24.176 273 173 8 226 475 250 511 8.91e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566010 AT5G36110.1 48.546 447 222 3 33 475 33 475 2.30e-151 440
Msa0566010 AT5G36110.2 45.014 351 186 2 33 380 33 379 1.28e-101 310
Msa0566010 AT2G42850.1 35.590 458 282 8 22 475 34 482 1.91e-92 289
Msa0566010 AT5G45340.1 35.010 477 290 10 1 474 1 460 2.59e-90 283
Msa0566010 AT4G19230.1 33.689 469 286 10 13 473 8 459 3.59e-83 265
Msa0566010 AT5G45340.2 34.444 450 275 10 1 447 1 433 1.26e-79 255
Msa0566010 AT5G36140.1 41.137 299 171 2 19 316 17 311 1.05e-77 246
Msa0566010 AT4G19230.2 33.108 444 272 10 13 448 8 434 3.01e-74 242
Msa0566010 AT3G19270.2 31.263 467 307 8 6 470 6 460 1.07e-72 238
Msa0566010 AT2G29090.2 29.933 451 301 8 28 475 43 481 2.47e-70 232
Msa0566010 AT2G29090.1 29.933 451 301 8 28 475 43 481 2.47e-70 232
Msa0566010 AT3G50660.1 31.677 483 281 11 31 473 36 509 1.76e-69 230
Msa0566010 AT3G19270.1 31.011 445 293 8 6 448 6 438 2.85e-66 220
Msa0566010 AT1G12740.1 27.865 445 310 8 34 474 31 468 4.14e-64 215
Msa0566010 AT1G12740.4 27.494 451 310 9 34 474 31 474 7.20e-62 209
Msa0566010 AT1G12740.2 27.273 451 311 9 34 474 31 474 2.53e-61 208
Msa0566010 AT4G36380.1 29.372 446 304 8 34 473 69 509 4.17e-61 208
Msa0566010 AT2G29090.3 32.081 346 226 5 132 475 48 386 1.28e-60 203
Msa0566010 AT5G05690.1 29.911 448 293 11 32 471 29 463 5.42e-59 201
Msa0566010 AT2G32440.2 28.632 475 321 8 12 473 15 484 1.24e-58 201
Msa0566010 AT2G32440.1 28.632 475 321 8 12 473 15 484 1.24e-58 201
Msa0566010 AT1G19630.1 26.947 475 336 9 6 474 4 473 1.91e-57 197
Msa0566010 AT5G36130.1 59.420 138 55 1 339 475 1 138 6.50e-56 183
Msa0566010 AT3G13730.1 27.928 444 304 9 35 471 52 486 1.15e-55 193
Msa0566010 AT5G14400.2 28.859 447 282 10 39 478 1 418 2.51e-55 191
Msa0566010 AT2G42850.2 32.782 363 232 7 22 380 34 388 4.75e-55 189
Msa0566010 AT1G19630.3 27.273 418 297 7 33 448 34 446 1.38e-53 187
Msa0566010 AT1G73340.1 28.033 478 310 10 11 473 19 477 1.41e-53 187
Msa0566010 AT3G13730.2 28.095 420 288 8 35 447 52 464 2.09e-53 186
Msa0566010 AT1G05160.2 28.859 447 309 8 34 474 45 488 7.44e-53 186
Msa0566010 AT1G05160.1 28.859 447 309 8 34 474 45 488 7.44e-53 186
Msa0566010 AT5G14400.3 29.257 417 260 9 39 448 1 389 6.77e-52 181
Msa0566010 AT3G30180.1 26.490 453 306 11 8 449 3 439 2.41e-50 178
Msa0566010 AT3G50660.2 30.446 404 245 9 31 406 36 431 8.94e-49 174
Msa0566010 AT5G38970.1 25.630 476 333 11 6 475 4 464 1.06e-47 171
Msa0566010 AT5G05690.2 28.684 380 260 7 32 409 29 399 7.65e-45 162
Msa0566010 AT1G19630.2 26.649 379 272 6 34 410 35 409 3.10e-44 161
Msa0566010 AT3G44970.1 29.039 458 290 13 34 474 35 474 1.23e-43 160
Msa0566010 AT1G78490.1 29.318 440 275 15 34 455 35 456 6.66e-43 158
Msa0566010 AT5G14400.1 27.877 391 247 9 95 478 2 364 1.39e-42 155
Msa0566010 AT1G55940.2 26.512 430 298 12 34 451 45 468 1.15e-40 153
Msa0566010 AT1G55940.1 26.824 425 293 12 34 446 45 463 2.14e-40 151
Msa0566010 AT5G05690.3 27.966 354 236 9 125 471 3 344 2.80e-40 148
Msa0566010 AT4G15300.3 26.291 426 290 11 34 450 25 435 3.53e-40 150
Msa0566010 AT4G15300.2 26.291 426 290 11 34 450 35 445 3.64e-40 151
Msa0566010 AT5G38970.2 24.806 387 278 8 93 475 6 383 7.90e-39 145
Msa0566010 AT5G38970.4 24.806 387 278 8 93 475 6 383 7.90e-39 145
Msa0566010 AT1G12740.3 26.331 338 241 6 34 369 31 362 8.65e-39 145
Msa0566010 AT4G15393.2 26.932 427 285 14 34 450 35 444 9.16e-38 144
Msa0566010 AT4G15396.1 25.527 427 293 11 34 450 35 446 1.03e-37 144
Msa0566010 AT4G15300.1 26.018 442 293 13 34 450 25 457 3.89e-37 142
Msa0566010 AT5G14400.4 29.290 338 222 8 39 369 1 328 8.46e-37 138
Msa0566010 AT4G15396.3 25.416 421 290 10 34 444 35 441 3.78e-36 139
Msa0566010 AT4G36380.2 27.679 336 237 5 34 366 69 401 6.15e-36 138
Msa0566010 AT1G65670.1 25.058 431 289 11 34 452 35 443 6.79e-36 139
Msa0566010 AT5G48000.2 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.4 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.7 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.6 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.5 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.3 25.926 459 307 12 34 476 35 476 9.60e-36 139
Msa0566010 AT5G48000.1 26.144 459 306 12 34 476 76 517 2.16e-35 138
Msa0566010 AT5G38970.3 24.691 405 286 9 6 405 4 394 3.31e-35 136
Msa0566010 AT4G15310.1 25.658 456 315 13 6 450 6 448 6.92e-32 127
Msa0566010 AT1G78490.2 29.049 389 242 14 34 406 35 405 1.88e-31 125
Msa0566010 AT4G15396.2 24.764 424 279 12 34 450 35 425 1.19e-30 124
Msa0566010 AT3G30290.1 24.485 388 268 11 73 450 3 375 1.67e-28 117
Msa0566010 AT4G15393.1 26.053 380 258 12 34 406 35 398 3.25e-25 107
Msa0566010 AT2G29090.4 24.567 289 205 6 28 314 43 320 9.05e-25 105
Msa0566010 AT4G15396.4 24.474 380 266 9 34 406 35 400 1.37e-24 105
Msa0566010 AT2G34490.1 25.600 375 255 12 119 474 121 490 3.94e-22 99.8
Msa0566010 AT4G37320.1 33.654 208 131 4 247 451 257 460 5.83e-22 99.0
Msa0566010 AT3G28740.1 32.407 216 137 4 258 472 278 485 1.31e-21 98.2
Msa0566010 AT1G31800.1 30.526 190 122 3 268 451 357 542 1.69e-21 98.2
Msa0566010 AT1G11680.1 22.869 481 329 13 4 463 12 471 7.62e-21 95.5
Msa0566010 AT2G46960.1 29.496 278 170 10 215 475 132 400 1.27e-20 94.4
Msa0566010 AT2G46960.2 29.496 278 170 10 215 475 248 516 3.14e-20 94.0
Msa0566010 AT4G15393.3 23.077 377 240 9 34 406 35 365 4.74e-20 92.0
Msa0566010 AT5G52400.1 28.626 262 166 10 224 475 268 518 9.06e-20 92.4
Msa0566010 AT4G37330.1 31.280 211 138 4 247 454 254 460 2.79e-19 90.9
Msa0566010 AT1G66540.2 30.374 214 139 5 247 455 84 292 8.96e-19 87.8
Msa0566010 AT4G37400.1 28.750 240 155 5 219 451 231 461 9.52e-19 89.4
Msa0566010 AT3G56630.1 29.167 240 148 8 250 474 264 496 1.04e-18 89.4
Msa0566010 AT1G66540.1 30.374 214 139 5 247 455 143 351 1.05e-18 88.2
Msa0566010 AT3G44970.2 27.160 324 204 11 34 342 35 341 1.40e-18 87.8
Msa0566010 AT3G53130.1 26.190 252 159 7 221 455 275 516 1.52e-18 89.0
Msa0566010 AT3G14630.1 28.926 242 160 6 216 450 245 481 1.84e-18 88.6
Msa0566010 AT3G14630.2 28.926 242 160 6 216 450 300 536 2.55e-18 88.2
Msa0566010 AT4G37410.1 27.848 237 159 5 219 451 233 461 2.71e-18 87.8
Msa0566010 AT4G37370.1 30.097 206 137 4 247 449 256 457 3.69e-18 87.4
Msa0566010 AT2G34500.1 22.432 370 269 9 119 474 120 485 6.29e-18 86.7
Msa0566010 AT4G37360.1 30.151 199 134 3 258 455 270 464 6.55e-18 86.7
Msa0566010 AT5G24910.1 27.622 286 168 12 212 473 259 529 7.60e-18 86.7
Msa0566010 AT2G28850.1 23.418 474 318 14 28 474 31 486 8.10e-18 86.3
Msa0566010 AT2G26710.1 24.742 388 251 13 112 471 136 510 8.18e-18 86.7
Msa0566010 AT2G28860.1 23.219 379 255 12 119 474 121 486 1.25e-17 85.9
Msa0566010 AT3G14640.1 24.110 365 238 11 114 450 134 487 1.28e-17 85.9
Msa0566010 AT3G14640.2 24.110 365 238 11 114 450 156 509 1.54e-17 85.9
Msa0566010 AT5G24900.2 29.126 206 128 6 278 473 210 407 1.56e-17 85.1
Msa0566010 AT3G14660.1 25.479 365 231 9 114 450 134 485 2.77e-17 84.7
Msa0566010 AT3G14660.2 28.405 257 166 7 204 450 91 339 3.84e-17 83.2
Msa0566010 AT5G24900.1 29.126 206 128 6 278 473 327 524 4.58e-17 84.3
Msa0566010 AT4G37430.1 27.686 242 161 7 219 455 236 468 5.09e-17 84.0
Msa0566010 AT5G57220.1 29.469 207 140 4 247 451 253 455 7.19e-17 83.6
Msa0566010 AT2G46950.1 27.536 276 174 9 217 475 303 569 8.35e-17 83.6
Msa0566010 AT1G34540.1 27.830 212 136 7 247 446 260 466 9.04e-17 83.2
Msa0566010 AT5G25120.1 31.527 203 121 7 285 475 294 490 9.92e-17 83.2
Msa0566010 AT2G45510.1 26.360 239 163 4 238 463 255 493 1.11e-16 82.8
Msa0566010 AT4G37310.1 29.167 216 136 6 247 449 259 470 1.13e-16 82.8
Msa0566010 AT3G14690.2 23.990 421 275 16 63 450 112 520 1.30e-16 82.8
Msa0566010 AT1G64930.1 30.928 194 123 5 266 451 290 480 1.35e-16 82.8
Msa0566010 AT5G25130.1 31.527 203 121 7 285 475 294 490 1.42e-16 82.4
Msa0566010 AT3G14690.1 23.990 421 275 16 63 450 77 485 1.67e-16 82.4
Msa0566010 AT4G13290.1 28.125 288 179 10 187 460 195 468 2.47e-16 81.6
Msa0566010 AT1G64940.1 30.172 232 145 8 232 451 254 480 2.82e-16 81.6
Msa0566010 AT1G75130.1 26.394 269 181 8 210 468 234 495 2.90e-16 81.6
Msa0566010 AT4G13770.1 23.983 467 320 15 12 450 8 467 3.01e-16 81.6
Msa0566010 AT2G44890.1 25.105 239 166 4 238 463 255 493 4.49e-16 81.3
Msa0566010 AT4G13310.1 29.464 224 141 7 248 460 258 475 5.11e-16 80.9
Msa0566010 AT3G14680.1 28.016 257 169 8 203 450 236 485 6.97e-16 80.5
Msa0566010 AT5G58860.1 27.857 280 171 11 221 475 234 507 1.05e-15 80.1
Msa0566010 AT5G25140.1 31.959 194 120 5 282 469 291 478 1.10e-15 79.7
Msa0566010 AT3G14610.1 23.056 360 247 12 114 450 133 485 1.18e-15 79.7
Msa0566010 AT4G37340.1 29.187 209 141 5 249 455 261 464 1.40e-15 79.3
Msa0566010 AT1G50520.1 27.004 237 150 6 226 448 253 480 2.76e-15 78.6
Msa0566010 AT5G67310.1 27.888 251 169 7 201 449 229 469 3.27e-15 78.6
Msa0566010 AT3G14620.1 27.206 272 172 11 217 471 248 510 3.74e-15 78.2
Msa0566010 AT5G06905.1 26.122 245 155 7 236 458 247 487 5.72e-15 77.8
Msa0566010 AT5G36220.2 27.692 195 136 3 258 451 130 320 2.41e-14 74.7
Msa0566010 AT5G36220.1 27.692 195 136 3 258 451 276 466 3.85e-14 75.1
Msa0566010 AT3G26230.1 31.217 189 117 6 278 460 294 475 3.88e-14 75.1
Msa0566010 AT4G15110.1 25.806 217 124 5 267 450 338 550 5.86e-14 74.7
Msa0566010 AT3G20935.1 27.477 222 143 5 238 450 93 305 7.15e-14 73.2
Msa0566010 AT3G20140.1 29.825 171 112 3 285 450 308 475 7.23e-14 74.3
Msa0566010 AT3G61040.1 28.261 230 149 5 233 449 237 463 7.89e-14 73.9
Msa0566010 AT3G32047.1 28.333 240 150 6 232 455 252 485 8.25e-14 73.9
Msa0566010 AT1G11600.1 21.639 476 297 18 31 454 32 483 1.00e-13 73.9
Msa0566010 AT5G25180.1 28.270 237 147 7 256 475 260 490 1.45e-13 73.2
Msa0566010 AT3G26300.1 30.233 172 110 4 285 450 298 465 1.51e-13 73.2
Msa0566010 AT2G45550.1 27.500 200 137 3 256 450 279 475 1.97e-13 72.8
Msa0566010 AT3G14650.1 27.197 239 161 6 220 450 252 485 2.36e-13 72.8
Msa0566010 AT2G26170.2 28.309 272 166 11 218 472 175 434 2.67e-13 72.0
Msa0566010 AT2G23220.1 25.962 208 147 4 247 451 272 475 3.18e-13 72.4
Msa0566010 AT2G26170.1 28.309 272 166 11 218 472 258 517 3.34e-13 72.0
Msa0566010 AT2G12190.1 29.437 231 146 7 233 451 256 481 3.42e-13 72.0
Msa0566010 AT3G20120.2 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0566010 AT3G20120.3 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0566010 AT3G20120.1 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0566010 AT5G38450.1 26.570 207 134 7 278 475 318 515 5.44e-13 71.6
Msa0566010 AT3G20120.4 28.000 175 114 3 285 450 307 478 6.16e-13 71.2
Msa0566010 AT4G27710.1 27.181 298 184 12 197 475 233 516 6.72e-13 71.2
Msa0566010 AT1G67110.1 25.180 278 181 8 215 475 242 509 7.92e-13 70.9
Msa0566010 AT4G12330.1 25.352 213 148 6 242 448 272 479 7.95e-13 70.9
Msa0566010 AT3G26310.1 30.168 179 114 5 279 450 290 464 9.89e-13 70.5
Msa0566010 AT2G23190.1 26.068 234 162 6 220 451 280 504 1.15e-12 70.5
Msa0566010 AT1G33730.1 27.751 209 142 4 247 450 135 339 1.24e-12 69.7
Msa0566010 AT1G33730.2 27.751 209 142 4 247 450 135 339 1.24e-12 69.7
Msa0566010 AT3G48280.1 29.958 237 147 8 230 455 231 459 1.79e-12 69.7
Msa0566010 AT1G64950.1 24.895 474 278 22 32 451 30 479 2.16e-12 69.7
Msa0566010 AT5G23190.1 24.696 247 167 6 221 451 271 514 2.27e-12 69.7
Msa0566010 AT5G04330.1 25.912 274 172 10 198 454 215 474 3.62e-12 68.9
Msa0566010 AT1G50560.1 25.833 240 158 7 256 478 281 517 3.83e-12 68.9
Msa0566010 AT4G36220.1 25.000 212 140 4 248 454 288 485 5.66e-12 68.2
Msa0566010 AT3G26180.2 26.818 220 142 6 247 454 125 337 7.95e-12 67.0
Msa0566010 AT1G13150.1 20.930 473 309 16 31 451 32 491 1.34e-11 67.0
Msa0566010 AT2G45580.2 27.523 218 136 7 249 453 120 328 1.48e-11 66.2
Msa0566010 AT3G26180.1 26.818 220 142 6 247 454 259 471 1.53e-11 67.0
Msa0566010 AT4G15350.1 27.429 175 115 4 285 450 302 473 2.59e-11 66.2
Msa0566010 AT2G45580.1 27.523 218 136 7 249 453 274 482 2.96e-11 65.9
Msa0566010 AT1G74540.1 27.528 178 121 4 285 457 289 463 3.41e-11 65.9
Msa0566010 AT1G13140.1 26.437 174 116 4 285 446 320 493 3.58e-11 65.9
Msa0566010 AT1G13140.2 26.437 174 116 4 285 446 294 467 3.91e-11 65.5
Msa0566010 AT3G26290.2 27.536 207 136 5 282 478 308 510 3.94e-11 65.5
Msa0566010 AT3G26290.1 27.536 207 136 5 282 478 295 497 4.06e-11 65.5
Msa0566010 AT3G20950.1 28.000 175 114 3 285 450 312 483 4.56e-11 65.5
Msa0566010 AT2G27010.1 26.286 175 117 3 285 450 284 455 4.99e-11 65.1
Msa0566010 AT2G45570.1 25.600 250 170 6 211 450 233 476 5.75e-11 65.1
Msa0566010 AT1G69500.1 23.588 301 169 9 224 474 232 521 6.81e-11 65.1
Msa0566010 AT3G48520.1 23.704 270 173 10 223 474 243 497 9.06e-11 64.3

Find 114 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAATTACTTGCCTAATA+TGG 0.207689 4_1:-66929539 Msa0566010:CDS
TGATTGTAGTTGAAAGTTTA+AGG 0.215714 4_1:-66930093 Msa0566010:five_prime_UTR
ATTATTCATCATATAGCTTA+TGG 0.234102 4_1:-66929989 Msa0566010:exon
CTTTCCAATGTGTGTTTATA+TGG 0.264138 4_1:+66929500 None:intergenic
AAGTAATTTCTAAGTGTTTC+TGG 0.266492 4_1:+66929550 None:intergenic
AGCATAGGTAAAATCCTTTA+TGG 0.275374 4_1:+66928034 None:intergenic
GAAAGGTTTGTTACATGAAT+AGG 0.281392 4_1:+66928764 None:intergenic
GTGGGACTATTCTGCAGTTT+TGG 0.281789 4_1:+66927305 None:intergenic
GAAGAAAAGGAAAGTGGATT+TGG 0.289451 4_1:-66928621 Msa0566010:CDS
AATGAATAAATAACCAAATA+TGG 0.307769 4_1:-66927332 Msa0566010:three_prime_UTR
CCTATGCTAGAACCTGAAAA+TGG 0.309453 4_1:-66927581 Msa0566010:CDS
AAGGTTGTCTCTTGTTAATA+AGG 0.311020 4_1:-66929623 Msa0566010:CDS
CCAAATGGAACATATGAATA+AGG 0.317996 4_1:+66927728 None:intergenic
GGAAATCCTAAGGTTCCTTT+AGG 0.319592 4_1:+66929868 None:intergenic
TAACAAGTAAATGTGATAAA+AGG 0.325476 4_1:+66928570 None:intergenic
GCCTTATGAAACCTTGTTCC+AGG 0.328634 4_1:+66928689 None:intergenic
ACCTTAGGATTTCCATTTGT+TGG 0.331369 4_1:-66929859 Msa0566010:CDS
CCTTATTCATATGTTCCATT+TGG 0.347733 4_1:-66927728 Msa0566010:CDS
TCTTGCCCCAAACACATTCT+AGG 0.349577 4_1:+66927698 None:intergenic
AGGAGGACCTAGAATGTGTT+TGG 0.349634 4_1:-66927705 Msa0566010:CDS
TGAAAGCTACAAATGAAATA+AGG 0.357447 4_1:-66928664 Msa0566010:CDS
GGCTTCGCAATCAACTTTCC+TGG 0.366680 4_1:-66928707 Msa0566010:CDS
AATTGCAAGGAGGATTTGTT+AGG 0.369231 4_1:+66930070 None:intergenic
AATGTGTATAGCTGTATTAT+AGG 0.370831 4_1:+66928824 None:intergenic
ATCTTGAGGGAAAGCAAATA+AGG 0.372882 4_1:-66929810 Msa0566010:CDS
TCATTGGTTATGAAGTATCT+TGG 0.378005 4_1:-66928449 Msa0566010:CDS
AAAGGTTTGTTACATGAATA+GGG 0.384152 4_1:+66928765 None:intergenic
CGCTTTCAGAGATGCCATAA+AGG 0.396578 4_1:-66928048 Msa0566010:CDS
GAATTTCTAAAAGGGATCAT+TGG 0.400489 4_1:-66928728 Msa0566010:CDS
TGAGCAATTCTATCCATATT+AGG 0.400802 4_1:+66929526 None:intergenic
GGAGGACCTAGAATGTGTTT+GGG 0.409965 4_1:-66927704 Msa0566010:CDS
TCAAAGGTTTCTCCAACAAA+TGG 0.410321 4_1:+66929847 None:intergenic
AAAACAAGAATGTTCAAGTA+TGG 0.410480 4_1:-66929672 Msa0566010:CDS
TCCTGGAACAAGGTTTCATA+AGG 0.411433 4_1:-66928690 Msa0566010:CDS
AATCTTCCTAAAGGAACCTT+AGG 0.418148 4_1:-66929874 Msa0566010:CDS
CGTATTATTATCGTGTGTAA+TGG 0.421695 4_1:+66927534 None:intergenic
TCCAGAAAATGAAATACTCT+TGG 0.427830 4_1:-66928115 Msa0566010:CDS
TGGGAAGGTTGAAGTCTGAT+TGG 0.431331 4_1:+66927554 None:intergenic
GTATTATTATCGTGTGTAAT+GGG 0.442260 4_1:+66927535 None:intergenic
TATTCATATGTTCCATTTGG+AGG 0.446643 4_1:-66927725 Msa0566010:CDS
ACTCCCCTGCCTCTTTCCCT+TGG 0.450901 4_1:+66928156 None:intergenic
TTCTAGATCAGTACTATCAT+TGG 0.451944 4_1:-66928465 Msa0566010:CDS
TTAAAATGATTATGAAGAAA+AGG 0.452233 4_1:-66928634 Msa0566010:CDS
TTTGATGCTTCAAGGTTTGA+AGG 0.459869 4_1:-66927764 Msa0566010:CDS
TCTCTGAAAGCGCCACCGAC+AGG 0.468430 4_1:+66928059 None:intergenic
GCATCTGCTTCCACAAGTGT+TGG 0.473974 4_1:-66927457 Msa0566010:three_prime_UTR
TCAGGATTTGAAAACAGTGT+TGG 0.475875 4_1:+66927791 None:intergenic
CTGAGGCTGTCCCCGCCTGT+CGG 0.476524 4_1:-66928074 Msa0566010:CDS
TGAAATTAGCCAAGGGAAAG+AGG 0.480337 4_1:-66928165 Msa0566010:CDS
CAATCAACTTTCCTGGAACA+AGG 0.481445 4_1:-66928700 Msa0566010:CDS
TGAAAGCGCCACCGACAGGC+GGG 0.482966 4_1:+66928063 None:intergenic
TTGTCTCTTGTTAATAAGGT+TGG 0.485068 4_1:-66929619 Msa0566010:CDS
GCTCAGTGAAGAAGCTGTTA+AGG 0.485490 4_1:-66929642 Msa0566010:CDS
TCATACTTGAACTTCTCATC+AGG 0.487310 4_1:+66927605 None:intergenic
TTTCTAAAAGCAAATCTTGA+GGG 0.493213 4_1:-66929823 Msa0566010:CDS
ACTCCTTCACATATGTGGTT+AGG 0.495089 4_1:+66930115 None:intergenic
ATTCTAGGTCCTCCTCCAAA+TGG 0.498202 4_1:+66927713 None:intergenic
ATTAGCCAAGGGAAAGAGGC+AGG 0.499684 4_1:-66928161 Msa0566010:CDS
GGTGTTTATGACAGTTGCAT+TGG 0.503191 4_1:-66927838 Msa0566010:intron
ATTCTTCAAAATATGATGAA+AGG 0.503401 4_1:+66928747 None:intergenic
GGCAGGGGAGTTATTGCAAT+GGG 0.509314 4_1:-66928144 Msa0566010:CDS
AGGCTGTCCCCGCCTGTCGG+TGG 0.509526 4_1:-66928071 Msa0566010:CDS
TCCAACAAATGGAAATCCTA+AGG 0.513579 4_1:+66929858 None:intergenic
AGTGGATTTGGATGAAAAGA+AGG 0.515529 4_1:-66928609 Msa0566010:CDS
GATTATGAAGAAAAGGAAAG+TGG 0.517025 4_1:-66928627 Msa0566010:CDS
TTGTGATGAAATGCAAAAGA+AGG 0.522587 4_1:+66929920 None:intergenic
GCTTCAAGGTTTGAAGGAGA+AGG 0.523358 4_1:-66927758 Msa0566010:CDS
TAGCCAAGGGAAAGAGGCAG+GGG 0.528348 4_1:-66928159 Msa0566010:CDS
GGAACATATGAATAAGGTGT+TGG 0.529659 4_1:+66927734 None:intergenic
TCATATGTTCCATTTGGAGG+AGG 0.534499 4_1:-66927722 Msa0566010:CDS
GTTTATGAACAAGTGTTGAA+AGG 0.536878 4_1:-66928413 Msa0566010:intron
CAATCACTCCTTCACATATG+TGG 0.541508 4_1:+66930110 None:intergenic
AGAAAGCTTAATCTTCCTAA+AGG 0.544980 4_1:-66929883 Msa0566010:CDS
AACACTTGTTCATAAACTTG+AGG 0.550446 4_1:+66928419 None:intergenic
TATTATCGTGTGTAATGGGA+AGG 0.553423 4_1:+66927539 None:intergenic
AATAAGAACTTGTTCCCAGC+TGG 0.553588 4_1:+66929703 None:intergenic
TTGTTGCTTATTTCTAAGCA+TGG 0.555375 4_1:-66928792 Msa0566010:CDS
CTGAAAGCGCCACCGACAGG+CGG 0.557611 4_1:+66928062 None:intergenic
CTTCAAGGTTTGAAGGAGAA+GGG 0.558408 4_1:-66927757 Msa0566010:CDS
GAAAGCGCCACCGACAGGCG+GGG 0.559653 4_1:+66928064 None:intergenic
CTTGTTACACCTGATACAAG+TGG 0.559763 4_1:-66928554 Msa0566010:CDS
ATTATAACATCCCTAGTGGA+TGG 0.567013 4_1:-66928010 Msa0566010:CDS
AACAGCTTCTTCACTGAGCT+AGG 0.574513 4_1:+66929646 None:intergenic
GAACAACTTGAAATTAGCCA+AGG 0.578712 4_1:-66928173 Msa0566010:CDS
GTTTGGGGCAAGAGTTCGCT+CGG 0.580677 4_1:-66927688 Msa0566010:CDS
TATTGTGAAACGTTTCAAGT+GGG 0.582770 4_1:-66927639 Msa0566010:CDS
ATGTTGCTTCTGAAGTTCTG+AGG 0.584534 4_1:-66928091 Msa0566010:CDS
TAACATCCCTAGTGGATGGA+AGG 0.587209 4_1:-66928006 Msa0566010:intron
GTGATGAAGCAAAAGTAACT+AGG 0.590193 4_1:-66929597 Msa0566010:CDS
ATTTCTAAAAGCAAATCTTG+AGG 0.591691 4_1:-66929824 Msa0566010:CDS
TATCTTGAAACCAACACTTG+TGG 0.599132 4_1:+66927447 None:intergenic
AAACATACCTTCCATCCACT+AGG 0.600198 4_1:+66927999 None:intergenic
AGCACCATATAAACACACAT+TGG 0.601255 4_1:-66929504 Msa0566010:CDS
ACAAAGAGAGCCAAAACTGT+TGG 0.605657 4_1:+66929943 None:intergenic
ACAAGAATGTTCAAGTATGG+TGG 0.606348 4_1:-66929669 Msa0566010:CDS
AGGGATGTTATAATCAGCAT+AGG 0.611512 4_1:+66928019 None:intergenic
CATATAAACACACATTGGAA+AGG 0.612746 4_1:-66929499 Msa0566010:intron
GTACTGATCTAGAAGTGTCA+TGG 0.614010 4_1:+66928474 None:intergenic
ACTGAACACATATAATTGCA+AGG 0.616038 4_1:+66930057 None:intergenic
AACATACCTTCCATCCACTA+GGG 0.616641 4_1:+66928000 None:intergenic
ATATTGTGAAACGTTTCAAG+TGG 0.621656 4_1:-66927640 Msa0566010:CDS
TTACACCTGATACAAGTGGA+AGG 0.625910 4_1:-66928550 Msa0566010:CDS
ATTCATCATATAGCTTATGG+AGG 0.626694 4_1:-66929986 Msa0566010:exon
GAACACACATACAACACACA+TGG 0.635289 4_1:-66927816 Msa0566010:CDS
TTAGCCAAGGGAAAGAGGCA+GGG 0.642507 4_1:-66928160 Msa0566010:CDS
AACAACTTGAAATTAGCCAA+GGG 0.643857 4_1:-66928172 Msa0566010:CDS
AGGCAGGGGAGTTATTGCAA+TGG 0.650161 4_1:-66928145 Msa0566010:CDS
GTACCTAACCACATATGTGA+AGG 0.653382 4_1:-66930118 Msa0566010:five_prime_UTR
GCTGATTATAACATCCCTAG+TGG 0.655417 4_1:-66928014 Msa0566010:CDS
TGTGATAAAAGGTCTTGTGT+AGG 0.663837 4_1:+66928581 None:intergenic
ATGAAGCAAAAGTAACTAGG+AGG 0.673193 4_1:-66929594 Msa0566010:CDS
AGGGGAGTTATTGCAATGGG+AGG 0.678989 4_1:-66928141 Msa0566010:CDS
GAGGACCTAGAATGTGTTTG+GGG 0.695156 4_1:-66927703 Msa0566010:CDS
GAACACATATAATTGCAAGG+AGG 0.765052 4_1:+66930060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAGATTTTTTTTTTTTTT+GGG - chr4_1:66927422-66927441 Msa0566010:three_prime_UTR 10.0%
!! TTTGATTAAATTTATGAAAA+TGG - chr4_1:66928199-66928218 Msa0566010:intron 10.0%
!!! GTTCAGATTTTTTTTTTTTT+TGG - chr4_1:66927421-66927440 Msa0566010:three_prime_UTR 15.0%
!!! TATTTTGAAGAATTTCTAAA+AGG - chr4_1:66928850-66928869 Msa0566010:CDS 15.0%
!!! ATTTTGAAGAATTTCTAAAA+GGG - chr4_1:66928851-66928870 Msa0566010:intron 15.0%
!! TTAAAATGATTATGAAGAAA+AGG - chr4_1:66928953-66928972 Msa0566010:intron 15.0%
!! TTTGAACATTAATTTCAATA+TGG - chr4_1:66929211-66929230 Msa0566010:intron 15.0%
!! AATGAATAAATAACCAAATA+TGG - chr4_1:66930255-66930274 Msa0566010:five_prime_UTR 15.0%
!!! CTTTGATTTGATAGTAAAAA+AGG + chr4_1:66927334-66927353 None:intergenic 20.0%
!! ATTATTCATCATATAGCTTA+TGG - chr4_1:66927598-66927617 Msa0566010:CDS 20.0%
!!! ATTTGCTTTTAGAAATTCAA+AGG + chr4_1:66927759-66927778 None:intergenic 20.0%
!! AAATTGCAAAAAATAAGAAC+CGG + chr4_1:66928414-66928433 None:intergenic 20.0%
!!! GCTAATTAACACTTTAAAAA+TGG + chr4_1:66928527-66928546 None:intergenic 20.0%
!!! TAAAGTTTGACTTTCTTTTA+GGG + chr4_1:66928618-66928637 None:intergenic 20.0%
!!! ATAAAGTTTGACTTTCTTTT+AGG + chr4_1:66928619-66928638 None:intergenic 20.0%
!! AAACTTTATTACACATTCAT+CGG - chr4_1:66928630-66928649 Msa0566010:CDS 20.0%
!!! ATTTTTGACAAACATCTATA+TGG + chr4_1:66928667-66928686 None:intergenic 20.0%
!!! TGTTAATTTACACTTTTGAA+GGG - chr4_1:66928719-66928738 Msa0566010:CDS 20.0%
!! ATTCTTCAAAATATGATGAA+AGG + chr4_1:66928843-66928862 None:intergenic 20.0%
!! TAACAAGTAAATGTGATAAA+AGG + chr4_1:66929020-66929039 None:intergenic 20.0%
!! TATAAGAAAAAAAAGCAACA+TGG + chr4_1:66929336-66929355 None:intergenic 20.0%
! TGATTGTAGTTGAAAGTTTA+AGG - chr4_1:66927494-66927513 Msa0566010:three_prime_UTR 25.0%
!!! AATAACTAGAGCTTTGTTTT+TGG + chr4_1:66927574-66927593 None:intergenic 25.0%
!! ATTTCTAAAAGCAAATCTTG+AGG - chr4_1:66927763-66927782 Msa0566010:CDS 25.0%
!! TTTCTAAAAGCAAATCTTGA+GGG - chr4_1:66927764-66927783 Msa0566010:CDS 25.0%
! AAAACAAGAATGTTCAAGTA+TGG - chr4_1:66927915-66927934 Msa0566010:intron 25.0%
! AAGTAATTTCTAAGTGTTTC+TGG + chr4_1:66928040-66928059 None:intergenic 25.0%
! TAGAAATTACTTGCCTAATA+TGG - chr4_1:66928048-66928067 Msa0566010:CDS 25.0%
! ACAAACTATCATGAAATGAA+AGG + chr4_1:66928161-66928180 None:intergenic 25.0%
!!! CTGTTTTATTAGCATGTTAT+TGG - chr4_1:66928281-66928300 Msa0566010:intron 25.0%
! AAAAACATGCTAGAATCATA+TGG + chr4_1:66928447-66928466 None:intergenic 25.0%
!! GTGTTAATTTACACTTTTGA+AGG - chr4_1:66928718-66928737 Msa0566010:CDS 25.0%
! AATGTGTATAGCTGTATTAT+AGG + chr4_1:66928766-66928785 None:intergenic 25.0%
!!! AAAGGTTTGTTACATGAATA+GGG + chr4_1:66928825-66928844 None:intergenic 25.0%
! TGAAAGCTACAAATGAAATA+AGG - chr4_1:66928923-66928942 Msa0566010:intron 25.0%
!! ATACTATTACTTCTTTTTGC+TGG - chr4_1:66929090-66929109 Msa0566010:intron 25.0%
!!! TATTCTAAAGCATGTATGTA+TGG - chr4_1:66929728-66929747 Msa0566010:CDS 25.0%
! GTATTATTATCGTGTGTAAT+GGG + chr4_1:66930055-66930074 None:intergenic 25.0%
ACTGAACACATATAATTGCA+AGG + chr4_1:66927533-66927552 None:intergenic 30.0%
!!! TAGAGCTTTGTTTTTGGAAT+TGG + chr4_1:66927568-66927587 None:intergenic 30.0%
ATTCATCATATAGCTTATGG+AGG - chr4_1:66927601-66927620 Msa0566010:CDS 30.0%
!! CATAGTTTTACCAACAGTTT+TGG - chr4_1:66927634-66927653 Msa0566010:CDS 30.0%
TTGTGATGAAATGCAAAAGA+AGG + chr4_1:66927670-66927689 None:intergenic 30.0%
AGAAAGCTTAATCTTCCTAA+AGG - chr4_1:66927704-66927723 Msa0566010:CDS 30.0%
!! GTTTTCAAGACTTCAATGTT+TGG - chr4_1:66927836-66927855 Msa0566010:intron 30.0%
AAGGTTGTCTCTTGTTAATA+AGG - chr4_1:66927964-66927983 Msa0566010:intron 30.0%
TTGTCTCTTGTTAATAAGGT+TGG - chr4_1:66927968-66927987 Msa0566010:intron 30.0%
TGAGCAATTCTATCCATATT+AGG + chr4_1:66928064-66928083 None:intergenic 30.0%
CTTTCCAATGTGTGTTTATA+TGG + chr4_1:66928090-66928109 None:intergenic 30.0%
CATATAAACACACATTGGAA+AGG - chr4_1:66928088-66928107 Msa0566010:CDS 30.0%
! AAATTTTCCTCAACAACAAC+TGG + chr4_1:66928226-66928245 None:intergenic 30.0%
AAAAATAAGAACCGGTGAAT+TGG + chr4_1:66928406-66928425 None:intergenic 30.0%
TAATTAGCAGATAGCAAGAT+AGG - chr4_1:66928539-66928558 Msa0566010:CDS 30.0%
!! AATTTACACTTTTGAAGGGA+AGG - chr4_1:66928723-66928742 Msa0566010:CDS 30.0%
!! TTGTTGCTTATTTCTAAGCA+TGG - chr4_1:66928795-66928814 Msa0566010:CDS 30.0%
!! GAAAGGTTTGTTACATGAAT+AGG + chr4_1:66928826-66928845 None:intergenic 30.0%
! GAATTTCTAAAAGGGATCAT+TGG - chr4_1:66928859-66928878 Msa0566010:intron 30.0%
GATTATGAAGAAAAGGAAAG+TGG - chr4_1:66928960-66928979 Msa0566010:intron 30.0%
TTCTAGATCAGTACTATCAT+TGG - chr4_1:66929122-66929141 Msa0566010:intron 30.0%
! TCATTGGTTATGAAGTATCT+TGG - chr4_1:66929138-66929157 Msa0566010:intron 30.0%
AACACTTGTTCATAAACTTG+AGG + chr4_1:66929171-66929190 None:intergenic 30.0%
!! GTTTATGAACAAGTGTTGAA+AGG - chr4_1:66929174-66929193 Msa0566010:intron 30.0%
CTTCTATGAAGAACTTGATT+AGG - chr4_1:66929356-66929375 Msa0566010:intron 30.0%
AACAACTTGAAATTAGCCAA+GGG - chr4_1:66929415-66929434 Msa0566010:intron 30.0%
TCCAGAAAATGAAATACTCT+TGG - chr4_1:66929472-66929491 Msa0566010:intron 30.0%
!!! TCCAAGAGTATTTCATTTTC+TGG + chr4_1:66929476-66929495 None:intergenic 30.0%
AGCATAGGTAAAATCCTTTA+TGG + chr4_1:66929556-66929575 None:intergenic 30.0%
!! CTTGAAGCATCAAATTTTTC+AGG + chr4_1:66929817-66929836 None:intergenic 30.0%
CTGAAAAATTTGATGCTTCA+AGG - chr4_1:66929815-66929834 Msa0566010:CDS 30.0%
CCAAATGGAACATATGAATA+AGG + chr4_1:66929862-66929881 None:intergenic 30.0%
CCTTATTCATATGTTCCATT+TGG - chr4_1:66929859-66929878 Msa0566010:CDS 30.0%
TATTCATATGTTCCATTTGG+AGG - chr4_1:66929862-66929881 Msa0566010:CDS 30.0%
ATATTGTGAAACGTTTCAAG+TGG - chr4_1:66929947-66929966 Msa0566010:CDS 30.0%
! TATTGTGAAACGTTTCAAGT+GGG - chr4_1:66929948-66929967 Msa0566010:CDS 30.0%
CGTATTATTATCGTGTGTAA+TGG + chr4_1:66930056-66930075 None:intergenic 30.0%
! AATTGCAAGGAGGATTTGTT+AGG + chr4_1:66927520-66927539 None:intergenic 35.0%
GAACACATATAATTGCAAGG+AGG + chr4_1:66927530-66927549 None:intergenic 35.0%
AATCTTCCTAAAGGAACCTT+AGG - chr4_1:66927713-66927732 Msa0566010:CDS 35.0%
ACCTTAGGATTTCCATTTGT+TGG - chr4_1:66927728-66927747 Msa0566010:CDS 35.0%
TCCAACAAATGGAAATCCTA+AGG + chr4_1:66927732-66927751 None:intergenic 35.0%
TCAAAGGTTTCTCCAACAAA+TGG + chr4_1:66927743-66927762 None:intergenic 35.0%
ATCTTGAGGGAAAGCAAATA+AGG - chr4_1:66927777-66927796 Msa0566010:CDS 35.0%
! GAGAATATTGCTGTGTTTTG+TGG - chr4_1:66927860-66927879 Msa0566010:intron 35.0%
ACAAGAATGTTCAAGTATGG+TGG - chr4_1:66927918-66927937 Msa0566010:intron 35.0%
GTGATGAAGCAAAAGTAACT+AGG - chr4_1:66927990-66928009 Msa0566010:intron 35.0%
ATGAAGCAAAAGTAACTAGG+AGG - chr4_1:66927993-66928012 Msa0566010:intron 35.0%
AGCACCATATAAACACACAT+TGG - chr4_1:66928083-66928102 Msa0566010:CDS 35.0%
ATCAATCAGTTCCTATGTGT+AGG - chr4_1:66928125-66928144 Msa0566010:CDS 35.0%
CTCTCTCTAACATGATTGAA+AGG + chr4_1:66928256-66928275 None:intergenic 35.0%
CATTTAAGTCACGGTTCAAT+TGG + chr4_1:66928482-66928501 None:intergenic 35.0%
CCGTTTAGACATTTAAGTCA+CGG + chr4_1:66928491-66928510 None:intergenic 35.0%
CCGTGACTTAAATGTCTAAA+CGG - chr4_1:66928488-66928507 Msa0566010:CDS 35.0%
! GAAGAAAAGGAAAGTGGATT+TGG - chr4_1:66928966-66928985 Msa0566010:intron 35.0%
! AGTGGATTTGGATGAAAAGA+AGG - chr4_1:66928978-66928997 Msa0566010:intron 35.0%
! TGTGATAAAAGGTCTTGTGT+AGG + chr4_1:66929009-66929028 None:intergenic 35.0%
AAAAACCTTCCACTTGTATC+AGG + chr4_1:66929045-66929064 None:intergenic 35.0%
! TGGAAGGTTTTTGAATGAAG+TGG - chr4_1:66929053-66929072 Msa0566010:intron 35.0%
GAACAACTTGAAATTAGCCA+AGG - chr4_1:66929414-66929433 Msa0566010:intron 35.0%
AGGGATGTTATAATCAGCAT+AGG + chr4_1:66929571-66929590 None:intergenic 35.0%
ATTATAACATCCCTAGTGGA+TGG - chr4_1:66929577-66929596 Msa0566010:CDS 35.0%
TCAGGATTTGAAAACAGTGT+TGG + chr4_1:66929799-66929818 None:intergenic 35.0%
TTTGATGCTTCAAGGTTTGA+AGG - chr4_1:66929823-66929842 Msa0566010:CDS 35.0%
GGAACATATGAATAAGGTGT+TGG + chr4_1:66929856-66929875 None:intergenic 35.0%
TCATACTTGAACTTCTCATC+AGG + chr4_1:66929985-66930004 None:intergenic 35.0%
! TATTATCGTGTGTAATGGGA+AGG + chr4_1:66930051-66930070 None:intergenic 35.0%
TATCTTGAAACCAACACTTG+TGG + chr4_1:66930143-66930162 None:intergenic 35.0%
!!! CAGTTTTGGAACACCATATT+TGG + chr4_1:66930271-66930290 None:intergenic 35.0%
GTACCTAACCACATATGTGA+AGG - chr4_1:66927469-66927488 Msa0566010:three_prime_UTR 40.0%
ACTCCTTCACATATGTGGTT+AGG + chr4_1:66927475-66927494 None:intergenic 40.0%
CAATCACTCCTTCACATATG+TGG + chr4_1:66927480-66927499 None:intergenic 40.0%
ACAAAGAGAGCCAAAACTGT+TGG + chr4_1:66927647-66927666 None:intergenic 40.0%
GGAAATCCTAAGGTTCCTTT+AGG + chr4_1:66927722-66927741 None:intergenic 40.0%
! AATAAGAACTTGTTCCCAGC+TGG + chr4_1:66927887-66927906 None:intergenic 40.0%
! AAATGGTCCAGTTGTTGTTG+AGG - chr4_1:66928216-66928235 Msa0566010:intron 40.0%
!! TGATTTCGAGTTGAATTGGC+TGG + chr4_1:66928334-66928353 None:intergenic 40.0%
!! CAGCTGATTTCGAGTTGAAT+TGG + chr4_1:66928338-66928357 None:intergenic 40.0%
CAATTCAACTCGAAATCAGC+TGG - chr4_1:66928336-66928355 Msa0566010:intron 40.0%
!! TTCGCTTGTTGGTTTGATTC+TGG - chr4_1:66928359-66928378 Msa0566010:intron 40.0%
! GATTCTGGCTATACTTTAGC+CGG - chr4_1:66928374-66928393 Msa0566010:intron 40.0%
! ATTCTGGCTATACTTTAGCC+GGG - chr4_1:66928375-66928394 Msa0566010:intron 40.0%
CAATCAACTTTCCTGGAACA+AGG - chr4_1:66928887-66928906 Msa0566010:intron 40.0%
TCCTGGAACAAGGTTTCATA+AGG - chr4_1:66928897-66928916 Msa0566010:intron 40.0%
CTTGTTACACCTGATACAAG+TGG - chr4_1:66929033-66929052 Msa0566010:intron 40.0%
TTACACCTGATACAAGTGGA+AGG - chr4_1:66929037-66929056 Msa0566010:intron 40.0%
!! GTACTGATCTAGAAGTGTCA+TGG + chr4_1:66929116-66929135 None:intergenic 40.0%
TGAAATTAGCCAAGGGAAAG+AGG - chr4_1:66929422-66929441 Msa0566010:intron 40.0%
!! ATGTTGCTTCTGAAGTTCTG+AGG - chr4_1:66929496-66929515 Msa0566010:intron 40.0%
GCTGATTATAACATCCCTAG+TGG - chr4_1:66929573-66929592 Msa0566010:CDS 40.0%
AACATACCTTCCATCCACTA+GGG + chr4_1:66929590-66929609 None:intergenic 40.0%
AAACATACCTTCCATCCACT+AGG + chr4_1:66929591-66929610 None:intergenic 40.0%
GGTGTTTATGACAGTTGCAT+TGG - chr4_1:66929749-66929768 Msa0566010:CDS 40.0%
GAACACACATACAACACACA+TGG - chr4_1:66929771-66929790 Msa0566010:CDS 40.0%
CTTCAAGGTTTGAAGGAGAA+GGG - chr4_1:66929830-66929849 Msa0566010:CDS 40.0%
TCATATGTTCCATTTGGAGG+AGG - chr4_1:66929865-66929884 Msa0566010:CDS 40.0%
!!! CCATTTTCAGGTTCTAGCAT+AGG + chr4_1:66930009-66930028 None:intergenic 40.0%
CCTATGCTAGAACCTGAAAA+TGG - chr4_1:66930006-66930025 Msa0566010:five_prime_UTR 40.0%
! CTGATTGGAAGTCCATTTTC+AGG + chr4_1:66930021-66930040 None:intergenic 40.0%
AACAGCTTCTTCACTGAGCT+AGG + chr4_1:66927944-66927963 None:intergenic 45.0%
GCTCAGTGAAGAAGCTGTTA+AGG - chr4_1:66927945-66927964 Msa0566010:intron 45.0%
GAACAGCTTGTCCTACACAT+AGG + chr4_1:66928139-66928158 None:intergenic 45.0%
!! AAATCAGCTGGTTCGCTTGT+TGG - chr4_1:66928348-66928367 Msa0566010:intron 45.0%
GCCTTATGAAACCTTGTTCC+AGG + chr4_1:66928901-66928920 None:intergenic 45.0%
!! AAAACAGTGCAGCTGACTTG+AGG + chr4_1:66929242-66929261 None:intergenic 45.0%
TACTTGAGGTCGGAACACAA+GGG - chr4_1:66929279-66929298 Msa0566010:intron 45.0%
CGCTTTCAGAGATGCCATAA+AGG - chr4_1:66929539-66929558 Msa0566010:CDS 45.0%
! TAACATCCCTAGTGGATGGA+AGG - chr4_1:66929581-66929600 Msa0566010:CDS 45.0%
GCTTCAAGGTTTGAAGGAGA+AGG - chr4_1:66929829-66929848 Msa0566010:CDS 45.0%
ATTCTAGGTCCTCCTCCAAA+TGG + chr4_1:66929877-66929896 None:intergenic 45.0%
AGGAGGACCTAGAATGTGTT+TGG - chr4_1:66929882-66929901 Msa0566010:CDS 45.0%
GGAGGACCTAGAATGTGTTT+GGG - chr4_1:66929883-66929902 Msa0566010:CDS 45.0%
GAGGACCTAGAATGTGTTTG+GGG - chr4_1:66929884-66929903 Msa0566010:CDS 45.0%
TCTTGCCCCAAACACATTCT+AGG + chr4_1:66929892-66929911 None:intergenic 45.0%
TGGGAAGGTTGAAGTCTGAT+TGG + chr4_1:66930036-66930055 None:intergenic 45.0%
! CTGTGTTTTGTGGACCAGCT+GGG - chr4_1:66927870-66927889 Msa0566010:intron 50.0%
! ACCGGTGAATTGGTTCAACC+CGG + chr4_1:66928396-66928415 None:intergenic 50.0%
GGCTTCGCAATCAACTTTCC+TGG - chr4_1:66928880-66928899 Msa0566010:intron 50.0%
CACTGCAACGTACTTGAGGT+CGG - chr4_1:66929269-66929288 Msa0566010:intron 50.0%
GTACTTGAGGTCGGAACACA+AGG - chr4_1:66929278-66929297 Msa0566010:intron 50.0%
ATTAGCCAAGGGAAAGAGGC+AGG - chr4_1:66929426-66929445 Msa0566010:intron 50.0%
TTAGCCAAGGGAAAGAGGCA+GGG - chr4_1:66929427-66929446 Msa0566010:intron 50.0%
AGGCAGGGGAGTTATTGCAA+TGG - chr4_1:66929442-66929461 Msa0566010:intron 50.0%
GGCAGGGGAGTTATTGCAAT+GGG - chr4_1:66929443-66929462 Msa0566010:intron 50.0%
AGGGGAGTTATTGCAATGGG+AGG - chr4_1:66929446-66929465 Msa0566010:intron 50.0%
GCATCTGCTTCCACAAGTGT+TGG - chr4_1:66930130-66930149 Msa0566010:five_prime_UTR 50.0%
! GCTGTGTTTTGTGGACCAGC+TGG - chr4_1:66927869-66927888 Msa0566010:intron 55.0%
! GCCGGGTTGAACCAATTCAC+CGG - chr4_1:66928392-66928411 Msa0566010:intron 55.0%
!! CAGTGCAGCTGACTTGAGGT+CGG + chr4_1:66929238-66929257 None:intergenic 55.0%
CGTGCACTGCAACGTACTTG+AGG - chr4_1:66929265-66929284 Msa0566010:intron 55.0%
TAGCCAAGGGAAAGAGGCAG+GGG - chr4_1:66929428-66929447 Msa0566010:intron 55.0%
! GTTTGGGGCAAGAGTTCGCT+CGG - chr4_1:66929899-66929918 Msa0566010:CDS 55.0%
ACTCCCCTGCCTCTTTCCCT+TGG + chr4_1:66929434-66929453 None:intergenic 60.0%
!! TCTCTGAAAGCGCCACCGAC+AGG + chr4_1:66929531-66929550 None:intergenic 60.0%
!! TGAAAGCGCCACCGACAGGC+GGG + chr4_1:66929527-66929546 None:intergenic 65.0%
!! CTGAAAGCGCCACCGACAGG+CGG + chr4_1:66929528-66929547 None:intergenic 65.0%
CTGAGGCTGTCCCCGCCTGT+CGG - chr4_1:66929513-66929532 Msa0566010:CDS 70.0%
!! GAAAGCGCCACCGACAGGCG+GGG + chr4_1:66929526-66929545 None:intergenic 70.0%
AGGCTGTCCCCGCCTGTCGG+TGG - chr4_1:66929516-66929535 Msa0566010:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 66927318 66930291 66927318 ID=Msa0566010;Name=Msa0566010
chr4_1 mRNA 66927318 66930291 66927318 ID=Msa0566010-mRNA-1;Parent=Msa0566010;Name=Msa0566010-mRNA-1;_AED=0.08;_eAED=0.08;_QI=299|1|1|1|1|1|4|223|480
chr4_1 exon 66927318 66927846 66927318 ID=Msa0566010-mRNA-1:exon:21853;Parent=Msa0566010-mRNA-1
chr4_1 exon 66928007 66928194 66928007 ID=Msa0566010-mRNA-1:exon:21852;Parent=Msa0566010-mRNA-1
chr4_1 exon 66928414 66928869 66928414 ID=Msa0566010-mRNA-1:exon:21851;Parent=Msa0566010-mRNA-1
chr4_1 exon 66929500 66930291 66929500 ID=Msa0566010-mRNA-1:exon:21850;Parent=Msa0566010-mRNA-1
chr4_1 five_prime_UTR 66929993 66930291 66929993 ID=Msa0566010-mRNA-1:five_prime_utr;Parent=Msa0566010-mRNA-1
chr4_1 CDS 66929500 66929992 66929500 ID=Msa0566010-mRNA-1:cds;Parent=Msa0566010-mRNA-1
chr4_1 CDS 66928414 66928869 66928414 ID=Msa0566010-mRNA-1:cds;Parent=Msa0566010-mRNA-1
chr4_1 CDS 66928007 66928194 66928007 ID=Msa0566010-mRNA-1:cds;Parent=Msa0566010-mRNA-1
chr4_1 CDS 66927541 66927846 66927541 ID=Msa0566010-mRNA-1:cds;Parent=Msa0566010-mRNA-1
chr4_1 three_prime_UTR 66927318 66927540 66927318 ID=Msa0566010-mRNA-1:three_prime_utr;Parent=Msa0566010-mRNA-1
Gene Sequence

>Msa0566010

ATGGAGGTGACAAAGCTCATAGTTTTACCAACAGTTTTGGCTCTCTTTGTCCTTCTTTTGCATTTCATCACAAGAATTATCAAACTCAGAAAGCTTAATCTTCCTAAAGGAACCTTAGGATTTCCATTTGTTGGAGAAACCTTTGAATTTCTAAAAGCAAATCTTGAGGGAAAGCAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCAAAAGTTTTCAAGACTTCAATGTTTGGAGAGAATATTGCTGTGTTTTGTGGACCAGCTGGGAACAAGTTCTTATTTAGCAATGAAAACAAGAATGTTCAAGTATGGTGGCCTAGCTCAGTGAAGAAGCTGTTAAGGTTGTCTCTTGTTAATAAGGTTGGTGATGAAGCAAAAGTAACTAGGAGGTTGCTTATGAGCTTTCTTAATCCAGAAACACTTAGAAATTACTTGCCTAATATGGATAGAATTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGAGCAAGTTGTTGTCTATCCTATAATACAGCTATACACATTTGAATTAGCTTGTTGCTTATTTCTAAGCATGGAAGACCCTATTCATGTAACAAACCTTTCATCATATTTTGAAGAATTTCTAAAAGGGATCATTGGCTTCGCAATCAACTTTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTACAAATGAAATAAGGAAAGAAATTAAAATGATTATGAAGAAAAGGAAAGTGGATTTGGATGAAAAGAAGGCATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGATACAAGTGGAAGGTTTTTGAATGAAGTGGAGATTATTGATAACATACTATTACTTCTTTTTGCTGGCCATGACACTTCTAGATCAGTACTATCATTGGTTATGAAGTATCTTGGAAATTTGCCTCAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGCAGGGGAGTTATTGCAATGGGAGGATATCCAGAAAATGAAATACTCTTGGAATGTTGCTTCTGAAGTTCTGAGGCTGTCCCCGCCTGTCGGTGGCGCTTTCAGAGATGCCATAAAGGATTTTACCTATGCTGATTATAACATCCCTAGTGGATGGAAGTTGCATTGGAACACACATACAACACACATGGATCCAACACTGTTTTCAAATCCTGAAAAATTTGATGCTTCAAGGTTTGAAGGAGAAGGGCCAACACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGGCAAGAGTTCGCTCGGTTAGAGATACTTGTTTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTATTCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAACCTGAAAATGGACTTCCAATCAGACTTCAACCTTCCCATTACACACGATAA
Protein sequence

>Msa0566010

MEVTKLIVLPTVLALFVLLLHFITRIIKLRKLNLPKGTLGFPFVGETFEFLKANLEGKQIRFIQERMKKYDSKVFKTSMFGENIAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKVTRRLLMSFLNPETLRNYLPNMDRIAQHHINTHWKGKEQVVVYPIIQLYTFELACCLFLSMEDPIHVTNLSSYFEEFLKGIIGFAINFPGTRFHKAMKATNEIRKEIKMIMKKRKVDLDEKKASPTQDLLSHLLVTPDTSGRFLNEVEIIDNILLLLFAGHDTSRSVLSLVMKYLGNLPQVYEQVLKEQLEISQGKEAGELLQWEDIQKMKYSWNVASEVLRLSPPVGGAFRDAIKDFTYADYNIPSGWKLHWNTHTTHMDPTLFSNPEKFDASRFEGEGPTPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPENGLPIRLQPSHYTR*