Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757610 | XP_003611950.1 | 92.788 | 208 | 14 | 1 | 1 | 208 | 1 | 207 | 1.64e-130 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757610 | sp|Q9ZU70|ATB21_ARATH | 46.018 | 226 | 100 | 9 | 1 | 210 | 1 | 220 | 4.16e-56 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757610 | G7KC76 | 92.788 | 208 | 14 | 1 | 1 | 208 | 1 | 207 | 7.81e-131 | 375 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0757610 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa0757610 | 0.811729 | 6.051381e-51 | -8.615850e-47 |
| Msa0043980 | Msa0757610 | 0.803495 | 3.391729e-49 | -8.615850e-47 |
| Msa0090550 | Msa0757610 | 0.810713 | 1.005379e-50 | -8.615850e-47 |
| Msa0101500 | Msa0757610 | -0.802914 | 4.474581e-49 | -8.615850e-47 |
| Msa0604290 | Msa0757610 | 0.820134 | 8.051454e-53 | -8.615850e-47 |
| Msa0645530 | Msa0757610 | 0.808327 | 3.270581e-50 | -8.615850e-47 |
| Msa0657120 | Msa0757610 | 0.815375 | 9.548704e-52 | -8.615850e-47 |
| Msa0672550 | Msa0757610 | 0.828593 | 8.249354e-55 | -8.615850e-47 |
| Msa0677530 | Msa0757610 | 0.802062 | 6.703906e-49 | -8.615850e-47 |
| Msa0682680 | Msa0757610 | 0.806749 | 7.070455e-50 | -8.615850e-47 |
| Msa0685090 | Msa0757610 | 0.817572 | 3.076860e-52 | -8.615850e-47 |
| Msa0701100 | Msa0757610 | 0.800192 | 1.617666e-48 | -8.615850e-47 |
| Msa0716310 | Msa0757610 | 0.907406 | 5.247030e-81 | -8.615850e-47 |
| Msa0752700 | Msa0757610 | 0.807044 | 6.125760e-50 | -8.615850e-47 |
| Msa0757610 | Msa0794970 | 0.819532 | 1.105334e-52 | -8.615850e-47 |
| Msa0757610 | Msa0798910 | 0.901333 | 2.979545e-78 | -8.615850e-47 |
| Msa0757610 | Msa0800370 | 0.802228 | 6.197650e-49 | -8.615850e-47 |
| Msa0757610 | Msa0831100 | 0.820290 | 7.416594e-53 | -8.615850e-47 |
| Msa0757610 | Msa0856960 | 0.800073 | 1.710175e-48 | -8.615850e-47 |
| Msa0757610 | Msa0985180 | 0.829106 | 6.198384e-55 | -8.615850e-47 |
| Msa0757610 | Msa1089460 | 0.807539 | 4.811660e-50 | -8.615850e-47 |
| Msa0757610 | Msa1122150 | 0.808972 | 2.381734e-50 | -8.615850e-47 |
| Msa0757610 | Msa1128270 | 0.801542 | 8.573273e-49 | -8.615850e-47 |
| Msa0757610 | Msa1171210 | 0.803332 | 3.666809e-49 | -8.615850e-47 |
| Msa0757610 | Msa1211420 | -0.800499 | 1.400420e-48 | -8.615850e-47 |
| Msa0757610 | Msa1316360 | 0.804010 | 2.651699e-49 | -8.615850e-47 |
| Msa0757610 | Msa1327640 | 0.800132 | 1.663748e-48 | -8.615850e-47 |
| Msa0757610 | Msa1331050 | -0.801864 | 7.364353e-49 | -8.615850e-47 |
| Msa0757610 | Msa1336560 | 0.802143 | 6.451188e-49 | -8.615850e-47 |
| Msa0757610 | Msa1390670 | 0.821592 | 3.719311e-53 | -8.615850e-47 |
| Msa0757610 | Msa1415010 | 0.966356 | 8.218065e-126 | -8.615850e-47 |
| Msa0757610 | Msa1419840 | 0.810653 | 1.035572e-50 | -8.615850e-47 |
| Msa0757610 | Msa1434420 | -0.821523 | 3.859952e-53 | -8.615850e-47 |
| Msa0757610 | Msa1458290 | 0.809069 | 2.270632e-50 | -8.615850e-47 |
| Msa0182990 | Msa0757610 | 0.817938 | 2.542765e-52 | -8.615850e-47 |
| Msa0191070 | Msa0757610 | 0.813431 | 2.569229e-51 | -8.615850e-47 |
| Msa0204960 | Msa0757610 | 0.810253 | 1.263350e-50 | -8.615850e-47 |
| Msa0217670 | Msa0757610 | 0.804869 | 1.756162e-49 | -8.615850e-47 |
| Msa0223330 | Msa0757610 | 0.806576 | 7.693805e-50 | -8.615850e-47 |
| Msa0223340 | Msa0757610 | 0.809549 | 1.791462e-50 | -8.615850e-47 |
| Msa0230610 | Msa0757610 | 0.833943 | 3.988517e-56 | -8.615850e-47 |
| Msa0233370 | Msa0757610 | 0.828828 | 7.237024e-55 | -8.615850e-47 |
| Msa0376910 | Msa0757610 | 0.803620 | 3.196334e-49 | -8.615850e-47 |
| Msa0382310 | Msa0757610 | 0.812604 | 3.899083e-51 | -8.615850e-47 |
| Msa0385500 | Msa0757610 | 0.814384 | 1.583494e-51 | -8.615850e-47 |
| Msa0387820 | Msa0757610 | 0.801656 | 8.122663e-49 | -8.615850e-47 |
| Msa0431210 | Msa0757610 | 0.806703 | 7.232233e-50 | -8.615850e-47 |
| Msa0257490 | Msa0757610 | 0.826898 | 2.106738e-54 | -8.615850e-47 |
| Msa0259240 | Msa0757610 | 0.817424 | 3.322294e-52 | -8.615850e-47 |
| Msa0281530 | Msa0757610 | 0.802128 | 6.496748e-49 | -8.615850e-47 |
| Msa0296790 | Msa0757610 | 0.802298 | 5.994213e-49 | -8.615850e-47 |
| Msa0311720 | Msa0757610 | 0.807054 | 6.096902e-50 | -8.615850e-47 |
| Msa0317960 | Msa0757610 | 0.819693 | 1.015727e-52 | -8.615850e-47 |
| Msa0336290 | Msa0757610 | 0.819895 | 9.132087e-53 | -8.615850e-47 |
| Msa0512340 | Msa0757610 | 0.802537 | 5.353269e-49 | -8.615850e-47 |
| Msa0520270 | Msa0757610 | 0.808864 | 2.510954e-50 | -8.615850e-47 |
| Msa0527540 | Msa0757610 | 0.820629 | 6.201965e-53 | -8.615850e-47 |
| Msa0542290 | Msa0757610 | 0.813086 | 3.058425e-51 | -8.615850e-47 |
| Msa0542560 | Msa0757610 | 0.800115 | 1.676378e-48 | -8.615850e-47 |
| Msa0547160 | Msa0757610 | 0.803375 | 3.592994e-49 | -8.615850e-47 |
| Msa0556060 | Msa0757610 | 0.815247 | 1.019339e-51 | -8.615850e-47 |
| Msa0564850 | Msa0757610 | 0.801841 | 7.444506e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757610 | MtrunA17_Chr5g0403701 | 92.788 | 208 | 14 | 1 | 1 | 208 | 1 | 207 | 1.50e-134 | 375 |
| Msa0757610 | MtrunA17_Chr5g0403691 | 81.532 | 222 | 28 | 3 | 1 | 210 | 1 | 221 | 2.80e-118 | 335 |
| Msa0757610 | MtrunA17_Chr4g0060031 | 38.776 | 147 | 73 | 3 | 31 | 160 | 62 | 208 | 8.95e-23 | 94.0 |
| Msa0757610 | MtrunA17_Chr3g0123691 | 60.811 | 74 | 29 | 0 | 54 | 127 | 60 | 133 | 4.19e-22 | 91.7 |
| Msa0757610 | MtrunA17_Chr6g0450991 | 47.273 | 110 | 49 | 2 | 54 | 156 | 67 | 174 | 6.98e-22 | 90.5 |
| Msa0757610 | MtrunA17_Chr8g0381741 | 56.250 | 80 | 35 | 0 | 45 | 124 | 45 | 124 | 7.46e-22 | 90.9 |
| Msa0757610 | MtrunA17_Chr6g0453021 | 50.505 | 99 | 49 | 0 | 45 | 143 | 87 | 185 | 1.17e-20 | 87.0 |
| Msa0757610 | MtrunA17_Chr5g0415941 | 60.563 | 71 | 28 | 0 | 54 | 124 | 87 | 157 | 2.48e-20 | 87.0 |
| Msa0757610 | MtrunA17_Chr8g0362151 | 44.898 | 98 | 54 | 0 | 46 | 143 | 69 | 166 | 3.74e-20 | 85.9 |
| Msa0757610 | MtrunA17_Chr5g0416391 | 44.737 | 114 | 58 | 1 | 46 | 159 | 69 | 177 | 6.27e-20 | 85.5 |
| Msa0757610 | MtrunA17_Chr3g0127511 | 47.959 | 98 | 44 | 1 | 56 | 153 | 40 | 130 | 8.07e-20 | 84.3 |
| Msa0757610 | MtrunA17_Chr8g0362751 | 58.571 | 70 | 29 | 0 | 54 | 123 | 89 | 158 | 9.94e-20 | 84.7 |
| Msa0757610 | MtrunA17_Chr7g0265521 | 45.918 | 98 | 53 | 0 | 48 | 145 | 57 | 154 | 4.48e-19 | 82.0 |
| Msa0757610 | MtrunA17_Chr1g0179581 | 51.250 | 80 | 39 | 0 | 54 | 133 | 28 | 107 | 6.19e-19 | 78.6 |
| Msa0757610 | MtrunA17_Chr3g0119291 | 44.660 | 103 | 57 | 0 | 51 | 153 | 56 | 158 | 8.65e-19 | 81.6 |
| Msa0757610 | MtrunA17_Chr8g0346251 | 44.248 | 113 | 63 | 0 | 58 | 170 | 45 | 157 | 2.26e-17 | 77.8 |
| Msa0757610 | MtrunA17_Chr7g0217111 | 47.778 | 90 | 47 | 0 | 54 | 143 | 80 | 169 | 9.15e-16 | 73.9 |
| Msa0757610 | MtrunA17_Chr4g0044091 | 43.564 | 101 | 43 | 1 | 54 | 154 | 65 | 151 | 1.05e-13 | 67.0 |
| Msa0757610 | MtrunA17_Chr4g0055851 | 43.564 | 101 | 43 | 1 | 54 | 154 | 120 | 206 | 1.76e-13 | 67.8 |
| Msa0757610 | MtrunA17_Chr8g0335131 | 45.263 | 95 | 47 | 1 | 54 | 143 | 146 | 240 | 6.77e-13 | 66.2 |
| Msa0757610 | MtrunA17_Chr1g0175651 | 38.938 | 113 | 55 | 1 | 42 | 154 | 142 | 240 | 9.61e-13 | 65.9 |
| Msa0757610 | MtrunA17_Chr2g0308611 | 38.017 | 121 | 61 | 1 | 34 | 154 | 180 | 286 | 1.23e-12 | 65.9 |
| Msa0757610 | MtrunA17_Chr4g0054421 | 45.263 | 95 | 47 | 1 | 54 | 143 | 127 | 221 | 1.37e-12 | 65.1 |
| Msa0757610 | MtrunA17_Chr1g0151971 | 42.574 | 101 | 44 | 1 | 54 | 154 | 130 | 216 | 1.57e-12 | 65.1 |
| Msa0757610 | MtrunA17_Chr7g0258831 | 40.566 | 106 | 49 | 1 | 49 | 154 | 155 | 246 | 7.60e-12 | 63.2 |
| Msa0757610 | MtrunA17_Chr5g0400781 | 45.263 | 95 | 47 | 1 | 54 | 143 | 123 | 217 | 1.19e-11 | 62.4 |
| Msa0757610 | MtrunA17_Chr5g0399491 | 43.158 | 95 | 49 | 1 | 54 | 143 | 136 | 230 | 4.84e-11 | 60.8 |
| Msa0757610 | MtrunA17_Chr3g0135331 | 43.836 | 73 | 41 | 0 | 52 | 124 | 143 | 215 | 5.10e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757610 | AT4G36740.2 | 52.133 | 211 | 91 | 7 | 7 | 210 | 10 | 217 | 1.53e-57 | 181 |
| Msa0757610 | AT2G18550.1 | 46.018 | 226 | 100 | 9 | 1 | 210 | 1 | 220 | 4.23e-57 | 180 |
| Msa0757610 | AT4G36740.1 | 52.607 | 211 | 89 | 8 | 7 | 210 | 10 | 216 | 8.01e-57 | 179 |
| Msa0757610 | AT5G66700.1 | 46.364 | 220 | 104 | 4 | 5 | 210 | 9 | 228 | 1.54e-47 | 156 |
| Msa0757610 | AT3G01470.1 | 32.850 | 207 | 109 | 5 | 2 | 178 | 13 | 219 | 5.10e-24 | 96.7 |
| Msa0757610 | AT1G69780.1 | 38.961 | 154 | 80 | 3 | 2 | 143 | 23 | 174 | 1.72e-23 | 95.5 |
| Msa0757610 | AT4G40060.1 | 63.380 | 71 | 26 | 0 | 54 | 124 | 59 | 129 | 6.87e-22 | 91.3 |
| Msa0757610 | AT2G22430.1 | 64.789 | 71 | 25 | 0 | 54 | 124 | 62 | 132 | 6.97e-22 | 91.7 |
| Msa0757610 | AT5G65310.2 | 57.143 | 77 | 33 | 0 | 43 | 119 | 43 | 119 | 2.81e-21 | 89.7 |
| Msa0757610 | AT5G65310.1 | 57.143 | 77 | 33 | 0 | 43 | 119 | 61 | 137 | 3.28e-21 | 89.7 |
| Msa0757610 | AT1G26960.1 | 42.647 | 136 | 73 | 1 | 54 | 184 | 71 | 206 | 3.69e-21 | 88.6 |
| Msa0757610 | AT5G53980.1 | 36.552 | 145 | 90 | 1 | 45 | 187 | 2 | 146 | 1.26e-20 | 84.7 |
| Msa0757610 | AT2G46680.2 | 48.000 | 100 | 51 | 1 | 48 | 146 | 26 | 125 | 5.91e-20 | 85.5 |
| Msa0757610 | AT5G03790.1 | 39.683 | 126 | 75 | 1 | 14 | 139 | 38 | 162 | 6.11e-20 | 84.7 |
| Msa0757610 | AT2G46680.1 | 45.370 | 108 | 52 | 1 | 48 | 155 | 26 | 126 | 7.35e-20 | 85.1 |
| Msa0757610 | AT5G03790.2 | 40.496 | 121 | 71 | 1 | 19 | 139 | 43 | 162 | 1.06e-19 | 83.2 |
| Msa0757610 | AT2G36610.1 | 45.370 | 108 | 51 | 2 | 46 | 145 | 63 | 170 | 5.17e-19 | 81.3 |
| Msa0757610 | AT3G01220.1 | 51.852 | 81 | 38 | 1 | 45 | 124 | 77 | 157 | 4.82e-18 | 80.5 |
| Msa0757610 | AT3G61890.1 | 44.444 | 99 | 55 | 0 | 57 | 155 | 33 | 131 | 4.94e-18 | 79.7 |
| Msa0757610 | AT5G15150.1 | 58.209 | 67 | 28 | 0 | 54 | 120 | 115 | 181 | 8.26e-18 | 80.5 |
| Msa0757610 | AT1G27045.2 | 40.152 | 132 | 66 | 1 | 52 | 170 | 15 | 146 | 2.19e-17 | 76.6 |
| Msa0757610 | AT1G27045.5 | 40.152 | 132 | 66 | 1 | 52 | 170 | 23 | 154 | 2.36e-17 | 77.0 |
| Msa0757610 | AT1G27045.3 | 40.152 | 132 | 66 | 1 | 52 | 170 | 23 | 154 | 2.36e-17 | 77.0 |
| Msa0757610 | AT1G27045.1 | 42.149 | 121 | 57 | 1 | 52 | 159 | 66 | 186 | 3.10e-17 | 77.4 |
| Msa0757610 | AT1G27045.4 | 55.882 | 68 | 30 | 0 | 52 | 119 | 66 | 133 | 3.09e-16 | 75.1 |
| Msa0757610 | AT2G22800.1 | 45.161 | 93 | 46 | 1 | 54 | 141 | 113 | 205 | 1.45e-12 | 65.5 |
| Msa0757610 | AT4G16780.1 | 41.905 | 105 | 51 | 2 | 44 | 143 | 124 | 223 | 3.03e-12 | 64.7 |
| Msa0757610 | AT2G01430.1 | 37.607 | 117 | 55 | 2 | 54 | 166 | 139 | 241 | 4.18e-12 | 63.9 |
| Msa0757610 | AT5G47370.1 | 35.659 | 129 | 78 | 1 | 20 | 143 | 96 | 224 | 1.01e-11 | 63.2 |
| Msa0757610 | AT4G17460.1 | 40.385 | 104 | 57 | 1 | 45 | 143 | 126 | 229 | 1.67e-11 | 62.4 |
| Msa0757610 | AT4G37790.1 | 44.086 | 93 | 47 | 1 | 54 | 141 | 126 | 218 | 1.75e-11 | 62.4 |
| Msa0757610 | AT5G06710.1 | 36.667 | 120 | 62 | 1 | 35 | 154 | 171 | 276 | 3.76e-11 | 61.6 |
Find 44 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTGTTGAGAAATTATT+TGG | 0.079303 | 5_2:-12574641 | None:intergenic |
| TCCACCTAGCCCTTCGATTC+TGG | 0.220585 | 5_2:-12574966 | None:intergenic |
| TGATGAACAAATGAAAATTT+TGG | 0.274227 | 5_2:+12574846 | Msa0757610:CDS |
| GAACCAAACTGCAACTTGTC+TGG | 0.307826 | 5_2:-12574944 | None:intergenic |
| AACAATTAATTTACATATTG+AGG | 0.325320 | 5_2:-12576281 | None:intergenic |
| GAAGTACTAGAGCTACTATT+TGG | 0.364392 | 5_2:-12576053 | None:intergenic |
| TCTTGCTTTCCTAAAAGATT+AGG | 0.374509 | 5_2:-12574496 | None:intergenic |
| ATCCCAGACAAGTTGCAGTT+TGG | 0.404850 | 5_2:+12574941 | Msa0757610:CDS |
| TATGTAAATTAATTGTTCAT+AGG | 0.406700 | 5_2:+12576287 | Msa0757610:three_prime_UTR |
| TTCACAATCCATGGAAATAG+TGG | 0.417032 | 5_2:+12576082 | Msa0757610:CDS |
| TTCTTACTACGCTTGCGTCT+TGG | 0.426044 | 5_2:-12574766 | None:intergenic |
| TATAAAGATTAATCCATTCC+TGG | 0.431532 | 5_2:-12576193 | None:intergenic |
| TTCATCAATTTCACAATCCA+TGG | 0.435367 | 5_2:+12576073 | Msa0757610:CDS |
| ACCTTGTTGAGAAATTATTT+GGG | 0.435398 | 5_2:-12574640 | None:intergenic |
| AGAGGTATACCTTGGTTTCA+AGG | 0.440743 | 5_2:-12575062 | None:intergenic |
| ACAATTAATTTACATATTGA+GGG | 0.456007 | 5_2:-12576280 | None:intergenic |
| ATTTGGGTGTATTCACAAGC+TGG | 0.458844 | 5_2:-12574624 | None:intergenic |
| ACTGAGACATAAGCATCATT+TGG | 0.463969 | 5_2:-12574596 | None:intergenic |
| TCAAATTCATCAAGTAATTG+TGG | 0.464011 | 5_2:-12576107 | None:intergenic |
| TTGTGGGTCCACTATTTCCA+TGG | 0.473816 | 5_2:-12576090 | None:intergenic |
| GATAGACTTGCAATGGAGCT+TGG | 0.475779 | 5_2:+12574913 | Msa0757610:CDS |
| AAGGAGACACTTCTCAAGAA+TGG | 0.492858 | 5_2:-12575043 | None:intergenic |
| CAAATTCATCAAGTAATTGT+GGG | 0.494706 | 5_2:-12576106 | None:intergenic |
| TAAACTTGAGTCAGAGAAGA+AGG | 0.499532 | 5_2:+12574891 | Msa0757610:CDS |
| AACCAAACTGCAACTTGTCT+GGG | 0.501567 | 5_2:-12574943 | None:intergenic |
| CAGTTTGGTTCCAGAATCGA+AGG | 0.504708 | 5_2:+12574956 | Msa0757610:CDS |
| TTTGGGTGTATTCACAAGCT+GGG | 0.519334 | 5_2:-12574623 | None:intergenic |
| GGTTCCAGAATCGAAGGGCT+AGG | 0.526167 | 5_2:+12574962 | Msa0757610:CDS |
| AGCATTTGTAGATAATGTAA+AGG | 0.526757 | 5_2:+12576253 | Msa0757610:three_prime_UTR |
| ATTACTTCAACGGCCAGGAA+TGG | 0.529342 | 5_2:+12576180 | Msa0757610:CDS |
| TTGAAGTAATATGTCGCATC+CGG | 0.533058 | 5_2:-12576167 | None:intergenic |
| GCAGCTTTCTGAGGCAGAGA+AGG | 0.540038 | 5_2:+12576010 | Msa0757610:CDS |
| GAAGAAGGATAGACTTGCAA+TGG | 0.545678 | 5_2:+12574906 | Msa0757610:CDS |
| AGCTACTATTTGGCTCTCGA+AGG | 0.571565 | 5_2:-12576043 | None:intergenic |
| GATGCGACATATTACTTCAA+CGG | 0.573154 | 5_2:+12576170 | Msa0757610:CDS |
| GCTAACAGAGCAGCTTTCTG+AGG | 0.593252 | 5_2:+12576001 | Msa0757610:CDS |
| CGTAGTAAGAAGAACAAAGG+TGG | 0.606299 | 5_2:+12574778 | Msa0757610:CDS |
| GAGACACTTCTCAAGAATGG+TGG | 0.632257 | 5_2:-12575040 | None:intergenic |
| GAAGTGTCTCCTTGAAACCA+AGG | 0.638232 | 5_2:+12575053 | Msa0757610:CDS |
| GACATATTACTTCAACGGCC+AGG | 0.639581 | 5_2:+12576175 | Msa0757610:CDS |
| ACCCAAATAATTTCTCAACA+AGG | 0.645027 | 5_2:+12574639 | Msa0757610:CDS |
| TCCAGAATCGAAGGGCTAGG+TGG | 0.655135 | 5_2:+12574965 | Msa0757610:CDS |
| AAGCGTAGTAAGAAGAACAA+AGG | 0.668285 | 5_2:+12574775 | Msa0757610:CDS |
| AGTTTGGTTCCAGAATCGAA+GGG | 0.690392 | 5_2:+12574957 | Msa0757610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTGTTATGTTTTTTT+AGG | + | chr5_2:12574727-12574746 | Msa0757610:intron | 10.0% |
| !!! | ATTTTTGTTATGTTTTTTTA+GGG | + | chr5_2:12574728-12574747 | Msa0757610:intron | 10.0% |
| !! | ATAATAAATTAAATAAGAAG+AGG | - | chr5_2:12575093-12575112 | None:intergenic | 10.0% |
| !! | AATATATAAAAACAAAAACA+AGG | + | chr5_2:12575675-12575694 | Msa0757610:intron | 10.0% |
| !! | AAATATTAATTGAACATATA+AGG | - | chr5_2:12575968-12575987 | None:intergenic | 10.0% |
| !!! | TATTTTTGTTATGTTTTTTT+AGG | + | chr5_2:12574727-12574746 | Msa0757610:intron | 10.0% |
| !!! | ATTTTTGTTATGTTTTTTTA+GGG | + | chr5_2:12574728-12574747 | Msa0757610:intron | 10.0% |
| !! | ATAATAAATTAAATAAGAAG+AGG | - | chr5_2:12575093-12575112 | None:intergenic | 10.0% |
| !! | AATATATAAAAACAAAAACA+AGG | + | chr5_2:12575675-12575694 | Msa0757610:intron | 10.0% |
| !! | AAATATTAATTGAACATATA+AGG | - | chr5_2:12575968-12575987 | None:intergenic | 10.0% |
| !!! | TTTTTGTTATGTTTTTTTAG+GGG | + | chr5_2:12574729-12574748 | Msa0757610:intron | 15.0% |
| !!! | AAAATTTTGGAAGAAAATTT+TGG | + | chr5_2:12574859-12574878 | Msa0757610:CDS | 15.0% |
| !!! | TTTATCATTTTTCATTTAAG+GGG | - | chr5_2:12575489-12575508 | None:intergenic | 15.0% |
| !!! | CTTTATCATTTTTCATTTAA+GGG | - | chr5_2:12575490-12575509 | None:intergenic | 15.0% |
| !!! | ACTTTATCATTTTTCATTTA+AGG | - | chr5_2:12575491-12575510 | None:intergenic | 15.0% |
| !! | AAAATGAAGAAAATATTGTA+CGG | - | chr5_2:12575767-12575786 | None:intergenic | 15.0% |
| !! | ACAATTAATTTACATATTGA+GGG | - | chr5_2:12576283-12576302 | None:intergenic | 15.0% |
| !! | AACAATTAATTTACATATTG+AGG | - | chr5_2:12576284-12576303 | None:intergenic | 15.0% |
| !! | TATGTAAATTAATTGTTCAT+AGG | + | chr5_2:12576287-12576306 | Msa0757610:three_prime_UTR | 15.0% |
| !!! | TTTTTGTTATGTTTTTTTAG+GGG | + | chr5_2:12574729-12574748 | Msa0757610:intron | 15.0% |
| !!! | AAAATTTTGGAAGAAAATTT+TGG | + | chr5_2:12574859-12574878 | Msa0757610:CDS | 15.0% |
| !!! | TTTATCATTTTTCATTTAAG+GGG | - | chr5_2:12575489-12575508 | None:intergenic | 15.0% |
| !!! | CTTTATCATTTTTCATTTAA+GGG | - | chr5_2:12575490-12575509 | None:intergenic | 15.0% |
| !!! | ACTTTATCATTTTTCATTTA+AGG | - | chr5_2:12575491-12575510 | None:intergenic | 15.0% |
| !! | AAAATGAAGAAAATATTGTA+CGG | - | chr5_2:12575767-12575786 | None:intergenic | 15.0% |
| !! | ACAATTAATTTACATATTGA+GGG | - | chr5_2:12576283-12576302 | None:intergenic | 15.0% |
| !! | AACAATTAATTTACATATTG+AGG | - | chr5_2:12576284-12576303 | None:intergenic | 15.0% |
| !! | TATGTAAATTAATTGTTCAT+AGG | + | chr5_2:12576287-12576306 | Msa0757610:three_prime_UTR | 15.0% |
| !!! | TGATGAACAAATGAAAATTT+TGG | + | chr5_2:12574846-12574865 | Msa0757610:CDS | 20.0% |
| !! | CACTAGTAATATAATATTGT+TGG | - | chr5_2:12575241-12575260 | None:intergenic | 20.0% |
| !!! | GTACAATATTTTCTTCATTT+TGG | + | chr5_2:12575766-12575785 | Msa0757610:intron | 20.0% |
| !! | TCTAAGCAAAGATTATTAAA+AGG | - | chr5_2:12575916-12575935 | None:intergenic | 20.0% |
| !! | ATTGAACATATAAGGTAATT+AGG | - | chr5_2:12575960-12575979 | None:intergenic | 20.0% |
| !!! | TGATGAACAAATGAAAATTT+TGG | + | chr5_2:12574846-12574865 | Msa0757610:CDS | 20.0% |
| !! | CACTAGTAATATAATATTGT+TGG | - | chr5_2:12575241-12575260 | None:intergenic | 20.0% |
| !!! | GTACAATATTTTCTTCATTT+TGG | + | chr5_2:12575766-12575785 | Msa0757610:intron | 20.0% |
| !! | TCTAAGCAAAGATTATTAAA+AGG | - | chr5_2:12575916-12575935 | None:intergenic | 20.0% |
| !! | ATTGAACATATAAGGTAATT+AGG | - | chr5_2:12575960-12575979 | None:intergenic | 20.0% |
| ! | ACCTTGTTGAGAAATTATTT+GGG | - | chr5_2:12574643-12574662 | None:intergenic | 25.0% |
| ! | AACCTTGTTGAGAAATTATT+TGG | - | chr5_2:12574644-12574663 | None:intergenic | 25.0% |
| ! | ACCAAATATTGAACAAAAAG+AGG | + | chr5_2:12574815-12574834 | Msa0757610:CDS | 25.0% |
| !! | TCCTCTTTTTGTTCAATATT+TGG | - | chr5_2:12574819-12574838 | None:intergenic | 25.0% |
| ! | TAATATTGTTGGAGAAATGA+TGG | - | chr5_2:12575230-12575249 | None:intergenic | 25.0% |
| ! | ATTCTCTCTTTCAACATTTA+GGG | - | chr5_2:12575415-12575434 | None:intergenic | 25.0% |
| ! | TATTCTCTCTTTCAACATTT+AGG | - | chr5_2:12575416-12575435 | None:intergenic | 25.0% |
| ! | GAGAACTTTAATAATGTGAA+CGG | - | chr5_2:12575579-12575598 | None:intergenic | 25.0% |
| ! | AGAAAATATTGTACGGAATT+AGG | - | chr5_2:12575760-12575779 | None:intergenic | 25.0% |
| ! | CAAATTCATCAAGTAATTGT+GGG | - | chr5_2:12576109-12576128 | None:intergenic | 25.0% |
| ! | TCAAATTCATCAAGTAATTG+TGG | - | chr5_2:12576110-12576129 | None:intergenic | 25.0% |
| ! | TATAAAGATTAATCCATTCC+TGG | - | chr5_2:12576196-12576215 | None:intergenic | 25.0% |
| ! | AGCATTTGTAGATAATGTAA+AGG | + | chr5_2:12576253-12576272 | Msa0757610:three_prime_UTR | 25.0% |
| ! | ACCTTGTTGAGAAATTATTT+GGG | - | chr5_2:12574643-12574662 | None:intergenic | 25.0% |
| ! | AACCTTGTTGAGAAATTATT+TGG | - | chr5_2:12574644-12574663 | None:intergenic | 25.0% |
| ! | ACCAAATATTGAACAAAAAG+AGG | + | chr5_2:12574815-12574834 | Msa0757610:CDS | 25.0% |
| !! | TCCTCTTTTTGTTCAATATT+TGG | - | chr5_2:12574819-12574838 | None:intergenic | 25.0% |
| ! | TAATATTGTTGGAGAAATGA+TGG | - | chr5_2:12575230-12575249 | None:intergenic | 25.0% |
| ! | ATTCTCTCTTTCAACATTTA+GGG | - | chr5_2:12575415-12575434 | None:intergenic | 25.0% |
| ! | TATTCTCTCTTTCAACATTT+AGG | - | chr5_2:12575416-12575435 | None:intergenic | 25.0% |
| ! | GAGAACTTTAATAATGTGAA+CGG | - | chr5_2:12575579-12575598 | None:intergenic | 25.0% |
| ! | AGAAAATATTGTACGGAATT+AGG | - | chr5_2:12575760-12575779 | None:intergenic | 25.0% |
| ! | CAAATTCATCAAGTAATTGT+GGG | - | chr5_2:12576109-12576128 | None:intergenic | 25.0% |
| ! | TCAAATTCATCAAGTAATTG+TGG | - | chr5_2:12576110-12576129 | None:intergenic | 25.0% |
| ! | TATAAAGATTAATCCATTCC+TGG | - | chr5_2:12576196-12576215 | None:intergenic | 25.0% |
| ! | AGCATTTGTAGATAATGTAA+AGG | + | chr5_2:12576253-12576272 | Msa0757610:three_prime_UTR | 25.0% |
| TCTTGCTTTCCTAAAAGATT+AGG | - | chr5_2:12574499-12574518 | None:intergenic | 30.0% | |
| ACCCAAATAATTTCTCAACA+AGG | + | chr5_2:12574639-12574658 | Msa0757610:CDS | 30.0% | |
| AACACTAGTAACGTCAATTT+AGG | + | chr5_2:12575285-12575304 | Msa0757610:intron | 30.0% | |
| ACACTAGTAACGTCAATTTA+GGG | + | chr5_2:12575286-12575305 | Msa0757610:intron | 30.0% | |
| TTCTCTCTTTCAACATTTAG+GGG | - | chr5_2:12575414-12575433 | None:intergenic | 30.0% | |
| ACATAACATGAATGATCATG+TGG | - | chr5_2:12575611-12575630 | None:intergenic | 30.0% | |
| !! | AGTGTTGTTTGTTGTCTTTA+AGG | - | chr5_2:12575719-12575738 | None:intergenic | 30.0% |
| TCTACTTCATGATAACAAGT+TGG | - | chr5_2:12575805-12575824 | None:intergenic | 30.0% | |
| TTCATCAATTTCACAATCCA+TGG | + | chr5_2:12576073-12576092 | Msa0757610:CDS | 30.0% | |
| TCTTGCTTTCCTAAAAGATT+AGG | - | chr5_2:12574499-12574518 | None:intergenic | 30.0% | |
| ACCCAAATAATTTCTCAACA+AGG | + | chr5_2:12574639-12574658 | Msa0757610:CDS | 30.0% | |
| AACACTAGTAACGTCAATTT+AGG | + | chr5_2:12575285-12575304 | Msa0757610:intron | 30.0% | |
| ACACTAGTAACGTCAATTTA+GGG | + | chr5_2:12575286-12575305 | Msa0757610:intron | 30.0% | |
| TTCTCTCTTTCAACATTTAG+GGG | - | chr5_2:12575414-12575433 | None:intergenic | 30.0% | |
| ACATAACATGAATGATCATG+TGG | - | chr5_2:12575611-12575630 | None:intergenic | 30.0% | |
| !! | AGTGTTGTTTGTTGTCTTTA+AGG | - | chr5_2:12575719-12575738 | None:intergenic | 30.0% |
| TCTACTTCATGATAACAAGT+TGG | - | chr5_2:12575805-12575824 | None:intergenic | 30.0% | |
| TTCATCAATTTCACAATCCA+TGG | + | chr5_2:12576073-12576092 | Msa0757610:CDS | 30.0% | |
| ACTGAGACATAAGCATCATT+TGG | - | chr5_2:12574599-12574618 | None:intergenic | 35.0% | |
| AAGCGTAGTAAGAAGAACAA+AGG | + | chr5_2:12574775-12574794 | Msa0757610:CDS | 35.0% | |
| TAAACTTGAGTCAGAGAAGA+AGG | + | chr5_2:12574891-12574910 | Msa0757610:CDS | 35.0% | |
| AAATAAGAAGAGGAAGCAAG+AGG | - | chr5_2:12575083-12575102 | None:intergenic | 35.0% | |
| ATTGTTGGAGAAATGATGGT+TGG | - | chr5_2:12575226-12575245 | None:intergenic | 35.0% | |
| TTGAAAGAGAGAATAAGCAC+TGG | + | chr5_2:12575421-12575440 | Msa0757610:intron | 35.0% | |
| CTTTAATAATGTGAACGGCT+TGG | - | chr5_2:12575574-12575593 | None:intergenic | 35.0% | |
| ! | TTCATTTTGGACCTTTCTCA+AGG | + | chr5_2:12575779-12575798 | Msa0757610:intron | 35.0% |
| ! | ACATTGATTAGACGGTAATG+GGG | - | chr5_2:12575858-12575877 | None:intergenic | 35.0% |
| ! | GACATTGATTAGACGGTAAT+GGG | - | chr5_2:12575859-12575878 | None:intergenic | 35.0% |
| ! | GAAGTACTAGAGCTACTATT+TGG | - | chr5_2:12576056-12576075 | None:intergenic | 35.0% |
| TTCACAATCCATGGAAATAG+TGG | + | chr5_2:12576082-12576101 | Msa0757610:CDS | 35.0% | |
| !! | TGATGATGTGTTTTTCATGC+CGG | + | chr5_2:12576148-12576167 | Msa0757610:CDS | 35.0% |
| TTGAAGTAATATGTCGCATC+CGG | - | chr5_2:12576170-12576189 | None:intergenic | 35.0% | |
| GATGCGACATATTACTTCAA+CGG | + | chr5_2:12576170-12576189 | Msa0757610:CDS | 35.0% | |
| ACTGAGACATAAGCATCATT+TGG | - | chr5_2:12574599-12574618 | None:intergenic | 35.0% | |
| AAGCGTAGTAAGAAGAACAA+AGG | + | chr5_2:12574775-12574794 | Msa0757610:CDS | 35.0% | |
| TAAACTTGAGTCAGAGAAGA+AGG | + | chr5_2:12574891-12574910 | Msa0757610:CDS | 35.0% | |
| AAATAAGAAGAGGAAGCAAG+AGG | - | chr5_2:12575083-12575102 | None:intergenic | 35.0% | |
| ATTGTTGGAGAAATGATGGT+TGG | - | chr5_2:12575226-12575245 | None:intergenic | 35.0% | |
| TTGAAAGAGAGAATAAGCAC+TGG | + | chr5_2:12575421-12575440 | Msa0757610:intron | 35.0% | |
| CTTTAATAATGTGAACGGCT+TGG | - | chr5_2:12575574-12575593 | None:intergenic | 35.0% | |
| ! | TTCATTTTGGACCTTTCTCA+AGG | + | chr5_2:12575779-12575798 | Msa0757610:intron | 35.0% |
| ! | ACATTGATTAGACGGTAATG+GGG | - | chr5_2:12575858-12575877 | None:intergenic | 35.0% |
| ! | GACATTGATTAGACGGTAAT+GGG | - | chr5_2:12575859-12575878 | None:intergenic | 35.0% |
| ! | GAAGTACTAGAGCTACTATT+TGG | - | chr5_2:12576056-12576075 | None:intergenic | 35.0% |
| TTCACAATCCATGGAAATAG+TGG | + | chr5_2:12576082-12576101 | Msa0757610:CDS | 35.0% | |
| !! | TGATGATGTGTTTTTCATGC+CGG | + | chr5_2:12576148-12576167 | Msa0757610:CDS | 35.0% |
| TTGAAGTAATATGTCGCATC+CGG | - | chr5_2:12576170-12576189 | None:intergenic | 35.0% | |
| GATGCGACATATTACTTCAA+CGG | + | chr5_2:12576170-12576189 | Msa0757610:CDS | 35.0% | |
| TTTGGGTGTATTCACAAGCT+GGG | - | chr5_2:12574626-12574645 | None:intergenic | 40.0% | |
| ATTTGGGTGTATTCACAAGC+TGG | - | chr5_2:12574627-12574646 | None:intergenic | 40.0% | |
| CGTAGTAAGAAGAACAAAGG+TGG | + | chr5_2:12574778-12574797 | Msa0757610:CDS | 40.0% | |
| GAAGAAGGATAGACTTGCAA+TGG | + | chr5_2:12574906-12574925 | Msa0757610:CDS | 40.0% | |
| AACCAAACTGCAACTTGTCT+GGG | - | chr5_2:12574946-12574965 | None:intergenic | 40.0% | |
| ! | AGTTTGGTTCCAGAATCGAA+GGG | + | chr5_2:12574957-12574976 | Msa0757610:CDS | 40.0% |
| AAGGAGACACTTCTCAAGAA+TGG | - | chr5_2:12575046-12575065 | None:intergenic | 40.0% | |
| ! | AGAGGTATACCTTGGTTTCA+AGG | - | chr5_2:12575065-12575084 | None:intergenic | 40.0% |
| ATGCTACCATGTTTCTTCTC+TGG | + | chr5_2:12575314-12575333 | Msa0757610:intron | 40.0% | |
| TATGCACGTTCATATGTGGT+GGG | - | chr5_2:12575525-12575544 | None:intergenic | 40.0% | |
| ATATGCACGTTCATATGTGG+TGG | - | chr5_2:12575526-12575545 | None:intergenic | 40.0% | |
| CTCATATGCACGTTCATATG+TGG | - | chr5_2:12575529-12575548 | None:intergenic | 40.0% | |
| !! | TAACAAGTTGGCCTTGAGAA+AGG | - | chr5_2:12575793-12575812 | None:intergenic | 40.0% |
| ! | GGACATTGATTAGACGGTAA+TGG | - | chr5_2:12575860-12575879 | None:intergenic | 40.0% |
| ! | GGTGTAGGACATTGATTAGA+CGG | - | chr5_2:12575866-12575885 | None:intergenic | 40.0% |
| TAATGAAAGAGACATGCACG+TGG | - | chr5_2:12575887-12575906 | None:intergenic | 40.0% | |
| TTTGGGTGTATTCACAAGCT+GGG | - | chr5_2:12574626-12574645 | None:intergenic | 40.0% | |
| ATTTGGGTGTATTCACAAGC+TGG | - | chr5_2:12574627-12574646 | None:intergenic | 40.0% | |
| CGTAGTAAGAAGAACAAAGG+TGG | + | chr5_2:12574778-12574797 | Msa0757610:CDS | 40.0% | |
| GAAGAAGGATAGACTTGCAA+TGG | + | chr5_2:12574906-12574925 | Msa0757610:CDS | 40.0% | |
| AACCAAACTGCAACTTGTCT+GGG | - | chr5_2:12574946-12574965 | None:intergenic | 40.0% | |
| ! | AGTTTGGTTCCAGAATCGAA+GGG | + | chr5_2:12574957-12574976 | Msa0757610:CDS | 40.0% |
| AAGGAGACACTTCTCAAGAA+TGG | - | chr5_2:12575046-12575065 | None:intergenic | 40.0% | |
| ! | AGAGGTATACCTTGGTTTCA+AGG | - | chr5_2:12575065-12575084 | None:intergenic | 40.0% |
| ATGCTACCATGTTTCTTCTC+TGG | + | chr5_2:12575314-12575333 | Msa0757610:intron | 40.0% | |
| TATGCACGTTCATATGTGGT+GGG | - | chr5_2:12575525-12575544 | None:intergenic | 40.0% | |
| ATATGCACGTTCATATGTGG+TGG | - | chr5_2:12575526-12575545 | None:intergenic | 40.0% | |
| CTCATATGCACGTTCATATG+TGG | - | chr5_2:12575529-12575548 | None:intergenic | 40.0% | |
| !! | TAACAAGTTGGCCTTGAGAA+AGG | - | chr5_2:12575793-12575812 | None:intergenic | 40.0% |
| ! | GGACATTGATTAGACGGTAA+TGG | - | chr5_2:12575860-12575879 | None:intergenic | 40.0% |
| ! | GGTGTAGGACATTGATTAGA+CGG | - | chr5_2:12575866-12575885 | None:intergenic | 40.0% |
| TAATGAAAGAGACATGCACG+TGG | - | chr5_2:12575887-12575906 | None:intergenic | 40.0% | |
| TTCTTACTACGCTTGCGTCT+TGG | - | chr5_2:12574769-12574788 | None:intergenic | 45.0% | |
| GATAGACTTGCAATGGAGCT+TGG | + | chr5_2:12574913-12574932 | Msa0757610:CDS | 45.0% | |
| ATCCCAGACAAGTTGCAGTT+TGG | + | chr5_2:12574941-12574960 | Msa0757610:CDS | 45.0% | |
| GAACCAAACTGCAACTTGTC+TGG | - | chr5_2:12574947-12574966 | None:intergenic | 45.0% | |
| ! | CAGTTTGGTTCCAGAATCGA+AGG | + | chr5_2:12574956-12574975 | Msa0757610:CDS | 45.0% |
| GAGACACTTCTCAAGAATGG+TGG | - | chr5_2:12575043-12575062 | None:intergenic | 45.0% | |
| ! | GAAGTGTCTCCTTGAAACCA+AGG | + | chr5_2:12575053-12575072 | Msa0757610:CDS | 45.0% |
| ! | AGGAAGCAAGAGGTATACCT+TGG | - | chr5_2:12575073-12575092 | None:intergenic | 45.0% |
| CTACCATGTTTCTTCTCTGG+TGG | + | chr5_2:12575317-12575336 | Msa0757610:intron | 45.0% | |
| AGACCACCAGAGAAGAAACA+TGG | - | chr5_2:12575323-12575342 | None:intergenic | 45.0% | |
| !! | AATAAGCACTGGCATGCAAC+CGG | + | chr5_2:12575432-12575451 | Msa0757610:intron | 45.0% |
| TTGCTTTGTCCTGAAGAACC+CGG | - | chr5_2:12575454-12575473 | None:intergenic | 45.0% | |
| ATGAACGTGCATATGAGCTC+TGG | + | chr5_2:12575532-12575551 | Msa0757610:intron | 45.0% | |
| TGAACGTGCATATGAGCTCT+GGG | + | chr5_2:12575533-12575552 | Msa0757610:intron | 45.0% | |
| !! | ACGGTAATGGGGTTTCACTT+GGG | - | chr5_2:12575847-12575866 | None:intergenic | 45.0% |
| !! | AGCTACTATTTGGCTCTCGA+AGG | - | chr5_2:12576046-12576065 | None:intergenic | 45.0% |
| TTGTGGGTCCACTATTTCCA+TGG | - | chr5_2:12576093-12576112 | None:intergenic | 45.0% | |
| GACATATTACTTCAACGGCC+AGG | + | chr5_2:12576175-12576194 | Msa0757610:CDS | 45.0% | |
| ATTACTTCAACGGCCAGGAA+TGG | + | chr5_2:12576180-12576199 | Msa0757610:CDS | 45.0% | |
| TTCTTACTACGCTTGCGTCT+TGG | - | chr5_2:12574769-12574788 | None:intergenic | 45.0% | |
| GATAGACTTGCAATGGAGCT+TGG | + | chr5_2:12574913-12574932 | Msa0757610:CDS | 45.0% | |
| ATCCCAGACAAGTTGCAGTT+TGG | + | chr5_2:12574941-12574960 | Msa0757610:CDS | 45.0% | |
| GAACCAAACTGCAACTTGTC+TGG | - | chr5_2:12574947-12574966 | None:intergenic | 45.0% | |
| ! | CAGTTTGGTTCCAGAATCGA+AGG | + | chr5_2:12574956-12574975 | Msa0757610:CDS | 45.0% |
| GAGACACTTCTCAAGAATGG+TGG | - | chr5_2:12575043-12575062 | None:intergenic | 45.0% | |
| ! | GAAGTGTCTCCTTGAAACCA+AGG | + | chr5_2:12575053-12575072 | Msa0757610:CDS | 45.0% |
| ! | AGGAAGCAAGAGGTATACCT+TGG | - | chr5_2:12575073-12575092 | None:intergenic | 45.0% |
| CTACCATGTTTCTTCTCTGG+TGG | + | chr5_2:12575317-12575336 | Msa0757610:intron | 45.0% | |
| AGACCACCAGAGAAGAAACA+TGG | - | chr5_2:12575323-12575342 | None:intergenic | 45.0% | |
| !! | AATAAGCACTGGCATGCAAC+CGG | + | chr5_2:12575432-12575451 | Msa0757610:intron | 45.0% |
| TTGCTTTGTCCTGAAGAACC+CGG | - | chr5_2:12575454-12575473 | None:intergenic | 45.0% | |
| ATGAACGTGCATATGAGCTC+TGG | + | chr5_2:12575532-12575551 | Msa0757610:intron | 45.0% | |
| TGAACGTGCATATGAGCTCT+GGG | + | chr5_2:12575533-12575552 | Msa0757610:intron | 45.0% | |
| !! | ACGGTAATGGGGTTTCACTT+GGG | - | chr5_2:12575847-12575866 | None:intergenic | 45.0% |
| !! | AGCTACTATTTGGCTCTCGA+AGG | - | chr5_2:12576046-12576065 | None:intergenic | 45.0% |
| TTGTGGGTCCACTATTTCCA+TGG | - | chr5_2:12576093-12576112 | None:intergenic | 45.0% | |
| GACATATTACTTCAACGGCC+AGG | + | chr5_2:12576175-12576194 | Msa0757610:CDS | 45.0% | |
| ATTACTTCAACGGCCAGGAA+TGG | + | chr5_2:12576180-12576199 | Msa0757610:CDS | 45.0% | |
| !! | ATAAGCACTGGCATGCAACC+GGG | + | chr5_2:12575433-12575452 | Msa0757610:intron | 50.0% |
| !! | GACGGTAATGGGGTTTCACT+TGG | - | chr5_2:12575848-12575867 | None:intergenic | 50.0% |
| AAGAGACATGCACGTGGTGT+AGG | - | chr5_2:12575881-12575900 | None:intergenic | 50.0% | |
| GCTAACAGAGCAGCTTTCTG+AGG | + | chr5_2:12576001-12576020 | Msa0757610:CDS | 50.0% | |
| !! | ATAAGCACTGGCATGCAACC+GGG | + | chr5_2:12575433-12575452 | Msa0757610:intron | 50.0% |
| !! | GACGGTAATGGGGTTTCACT+TGG | - | chr5_2:12575848-12575867 | None:intergenic | 50.0% |
| AAGAGACATGCACGTGGTGT+AGG | - | chr5_2:12575881-12575900 | None:intergenic | 50.0% | |
| GCTAACAGAGCAGCTTTCTG+AGG | + | chr5_2:12576001-12576020 | Msa0757610:CDS | 50.0% | |
| GGTTCCAGAATCGAAGGGCT+AGG | + | chr5_2:12574962-12574981 | Msa0757610:CDS | 55.0% | |
| TCCAGAATCGAAGGGCTAGG+TGG | + | chr5_2:12574965-12574984 | Msa0757610:CDS | 55.0% | |
| TCCACCTAGCCCTTCGATTC+TGG | - | chr5_2:12574969-12574988 | None:intergenic | 55.0% | |
| !! | GCAGCTTTCTGAGGCAGAGA+AGG | + | chr5_2:12576010-12576029 | Msa0757610:CDS | 55.0% |
| GGTTCCAGAATCGAAGGGCT+AGG | + | chr5_2:12574962-12574981 | Msa0757610:CDS | 55.0% | |
| TCCAGAATCGAAGGGCTAGG+TGG | + | chr5_2:12574965-12574984 | Msa0757610:CDS | 55.0% | |
| TCCACCTAGCCCTTCGATTC+TGG | - | chr5_2:12574969-12574988 | None:intergenic | 55.0% | |
| !! | GCAGCTTTCTGAGGCAGAGA+AGG | + | chr5_2:12576010-12576029 | Msa0757610:CDS | 55.0% |
| GGCATGCAACCGGGTTCTTC+AGG | + | chr5_2:12575442-12575461 | Msa0757610:intron | 60.0% | |
| GGCATGCAACCGGGTTCTTC+AGG | + | chr5_2:12575442-12575461 | Msa0757610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 12574494 | 12576328 | 12574494 | ID=Msa0757610;Name=Msa0757610 |
| chr5_2 | mRNA | 12574494 | 12576328 | 12574494 | ID=Msa0757610-mRNA-1;Parent=Msa0757610;Name=Msa0757610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|1|1|3|108|210 |
| chr5_2 | exon | 12574494 | 12574660 | 12574494 | ID=Msa0757610-mRNA-1:exon:5573;Parent=Msa0757610-mRNA-1 |
| chr5_2 | exon | 12574749 | 12575074 | 12574749 | ID=Msa0757610-mRNA-1:exon:5574;Parent=Msa0757610-mRNA-1 |
| chr5_2 | exon | 12575993 | 12576328 | 12575993 | ID=Msa0757610-mRNA-1:exon:5575;Parent=Msa0757610-mRNA-1 |
| chr5_2 | five_prime_UTR | 12574494 | 12574581 | 12574494 | ID=Msa0757610-mRNA-1:five_prime_utr;Parent=Msa0757610-mRNA-1 |
| chr5_2 | CDS | 12574582 | 12574660 | 12574582 | ID=Msa0757610-mRNA-1:cds;Parent=Msa0757610-mRNA-1 |
| chr5_2 | CDS | 12574749 | 12575074 | 12574749 | ID=Msa0757610-mRNA-1:cds;Parent=Msa0757610-mRNA-1 |
| chr5_2 | CDS | 12575993 | 12576220 | 12575993 | ID=Msa0757610-mRNA-1:cds;Parent=Msa0757610-mRNA-1 |
| chr5_2 | three_prime_UTR | 12576221 | 12576328 | 12576221 | ID=Msa0757610-mRNA-1:three_prime_utr;Parent=Msa0757610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
