Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182990 | XP_003592713.1 | 98.204 | 334 | 5 | 1 | 1 | 334 | 1 | 333 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182990 | sp|Q9LT17|BBR_ARATH | 62.069 | 261 | 92 | 1 | 72 | 332 | 84 | 337 | 5.19e-101 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182990 | G7IE80 | 98.204 | 334 | 5 | 1 | 1 | 334 | 1 | 333 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa0182990 | 0.807421 | 5.096493e-50 | -8.615850e-47 |
| Msa0020410 | Msa0182990 | 0.800604 | 1.333174e-48 | -8.615850e-47 |
| Msa0030300 | Msa0182990 | 0.817613 | 3.011353e-52 | -8.615850e-47 |
| Msa0043980 | Msa0182990 | 0.819444 | 1.157591e-52 | -8.615850e-47 |
| Msa0051740 | Msa0182990 | 0.806047 | 9.941506e-50 | -8.615850e-47 |
| Msa0051750 | Msa0182990 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0090550 | Msa0182990 | 0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa0099910 | Msa0182990 | 0.832700 | 8.139229e-56 | -8.615850e-47 |
| Msa0115990 | Msa0182990 | 0.815830 | 7.562321e-52 | -8.615850e-47 |
| Msa0148080 | Msa0182990 | 0.808241 | 3.410967e-50 | -8.615850e-47 |
| Msa0182990 | Msa0191070 | 0.834137 | 3.566160e-56 | -8.615850e-47 |
| Msa0182990 | Msa0224390 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0182990 | Msa0230610 | 0.975034 | 3.225131e-139 | -8.615850e-47 |
| Msa0182990 | Msa0233370 | 0.845546 | 3.795351e-59 | -8.615850e-47 |
| Msa0182990 | Msa0303460 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa0182990 | Msa0303520 | 0.810352 | 1.202848e-50 | -8.615850e-47 |
| Msa0182990 | Msa0311720 | 0.854481 | 1.196057e-61 | -8.615850e-47 |
| Msa0182990 | Msa0317960 | 0.816933 | 4.283178e-52 | -8.615850e-47 |
| Msa0182990 | Msa0376910 | 0.807647 | 4.564284e-50 | -8.615850e-47 |
| Msa0182990 | Msa0382310 | 0.854276 | 1.371175e-61 | -8.615850e-47 |
| Msa0182990 | Msa0392270 | 0.815739 | 7.922689e-52 | -8.615850e-47 |
| Msa0182990 | Msa0428580 | 0.803631 | 3.179852e-49 | -8.615850e-47 |
| Msa0182990 | Msa0431210 | 0.839859 | 1.231554e-57 | -8.615850e-47 |
| Msa0182990 | Msa0439980 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0182990 | Msa0479270 | 0.805369 | 1.380375e-49 | -8.615850e-47 |
| Msa0182990 | Msa0481030 | 0.803938 | 2.745323e-49 | -8.615850e-47 |
| Msa0182990 | Msa0518170 | 0.804750 | 1.859343e-49 | -8.615850e-47 |
| Msa0182990 | Msa0520270 | 0.848223 | 7.028889e-60 | -8.615850e-47 |
| Msa0182990 | Msa0560500 | 0.831422 | 1.684758e-55 | -8.615850e-47 |
| Msa0182990 | Msa0618950 | 0.804967 | 1.675313e-49 | -8.615850e-47 |
| Msa0182990 | Msa0618970 | 0.813321 | 2.715975e-51 | -8.615850e-47 |
| Msa0182990 | Msa0624060 | 0.806977 | 6.329401e-50 | -8.615850e-47 |
| Msa0182990 | Msa0657120 | 0.819440 | 1.160095e-52 | -8.615850e-47 |
| Msa0182990 | Msa0676130 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa0182990 | Msa0676180 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0182990 | Msa0685090 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0182990 | Msa0701100 | 0.813340 | 2.689483e-51 | -8.615850e-47 |
| Msa0182990 | Msa0727530 | 0.817162 | 3.803615e-52 | -8.615850e-47 |
| Msa0182990 | Msa0752700 | 0.823884 | 1.089191e-53 | -8.615850e-47 |
| Msa0182990 | Msa0757610 | 0.817938 | 2.542765e-52 | -8.615850e-47 |
| Msa0182990 | Msa0794970 | 0.824981 | 6.012110e-54 | -8.615850e-47 |
| Msa0182990 | Msa0800370 | 0.825457 | 4.639429e-54 | -8.615850e-47 |
| Msa0182990 | Msa0827280 | 0.812439 | 4.237055e-51 | -8.615850e-47 |
| Msa0182990 | Msa0831100 | 0.830726 | 2.496058e-55 | -8.615850e-47 |
| Msa0182990 | Msa0872440 | 0.816776 | 4.645095e-52 | -8.615850e-47 |
| Msa0182990 | Msa0985180 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0182990 | Msa1089320 | 0.845302 | 4.419964e-59 | -8.615850e-47 |
| Msa0182990 | Msa1089460 | 0.807463 | 4.993105e-50 | -8.615850e-47 |
| Msa0182990 | Msa1128270 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0182990 | Msa1206650 | 0.806680 | 7.314498e-50 | -8.615850e-47 |
| Msa0182990 | Msa1207310 | 0.801643 | 8.173176e-49 | -8.615850e-47 |
| Msa0182990 | Msa1231810 | 0.808292 | 3.328049e-50 | -8.615850e-47 |
| Msa0182990 | Msa1298100 | 0.811819 | 5.783664e-51 | -8.615850e-47 |
| Msa0182990 | Msa1307180 | 0.803924 | 2.763584e-49 | -8.615850e-47 |
| Msa0182990 | Msa1312500 | 0.804973 | 1.670029e-49 | -8.615850e-47 |
| Msa0182990 | Msa1316360 | 0.820597 | 6.307316e-53 | -8.615850e-47 |
| Msa0182990 | Msa1331320 | 0.807113 | 5.923483e-50 | -8.615850e-47 |
| Msa0182990 | Msa1336560 | 0.827744 | 1.320944e-54 | -8.615850e-47 |
| Msa0182990 | Msa1364210 | 0.845970 | 2.913278e-59 | -8.615850e-47 |
| Msa0182990 | Msa1378410 | 0.802651 | 5.071373e-49 | -8.615850e-47 |
| Msa0182990 | Msa1382020 | 0.814642 | 1.388178e-51 | -8.615850e-47 |
| Msa0182990 | Msa1415010 | 0.822689 | 2.070759e-53 | -8.615850e-47 |
| Msa0182990 | Msa1428780 | 0.815810 | 7.639969e-52 | -8.615850e-47 |
| Msa0182990 | Msa1434420 | -0.812301 | 4.542779e-51 | -8.615850e-47 |
| Msa0182990 | Msa1450720 | 0.802040 | 6.775212e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182990 | MtrunA17_Chr1g0211831 | 96.176 | 340 | 6 | 2 | 1 | 334 | 1 | 339 | 0.0 | 659 |
| Msa0182990 | MtrunA17_Chr4g0032561 | 46.825 | 126 | 61 | 3 | 213 | 332 | 120 | 245 | 2.49e-32 | 120 |
| Msa0182990 | MtrunA17_Chr8g0352131 | 47.748 | 111 | 55 | 2 | 220 | 327 | 130 | 240 | 3.76e-29 | 112 |
| Msa0182990 | MtrunA17_Chr3g0124751 | 51.546 | 97 | 45 | 2 | 235 | 330 | 138 | 233 | 1.07e-26 | 105 |
| Msa0182990 | MtrunA17_Chr2g0316601 | 33.766 | 154 | 90 | 3 | 191 | 332 | 367 | 520 | 7.71e-20 | 90.1 |
| Msa0182990 | MtrunA17_Chr2g0315711 | 43.434 | 99 | 46 | 3 | 238 | 326 | 229 | 327 | 4.35e-18 | 84.0 |
| Msa0182990 | MtrunA17_Chr2g0316591 | 38.333 | 120 | 65 | 4 | 213 | 331 | 190 | 301 | 2.24e-16 | 79.0 |
| Msa0182990 | MtrunA17_Chr7g0263911 | 44.211 | 95 | 50 | 3 | 233 | 325 | 540 | 633 | 3.05e-16 | 79.7 |
| Msa0182990 | MtrunA17_Chr6g0483631 | 38.462 | 130 | 60 | 4 | 213 | 327 | 232 | 356 | 5.03e-15 | 75.1 |
| Msa0182990 | MtrunA17_Chr4g0044601 | 41.000 | 100 | 57 | 1 | 233 | 330 | 600 | 699 | 5.74e-15 | 75.9 |
| Msa0182990 | MtrunA17_Chr1g0181401 | 34.615 | 130 | 70 | 4 | 195 | 323 | 409 | 524 | 3.31e-14 | 73.2 |
| Msa0182990 | MtrunA17_Chr8g0392341 | 29.375 | 160 | 97 | 5 | 179 | 329 | 200 | 352 | 5.12e-14 | 72.0 |
| Msa0182990 | MtrunA17_Chr1g0153211 | 39.175 | 97 | 53 | 3 | 233 | 325 | 609 | 703 | 5.19e-13 | 70.1 |
| Msa0182990 | MtrunA17_Chr3g0138951 | 34.286 | 105 | 60 | 2 | 233 | 328 | 429 | 533 | 9.72e-12 | 65.9 |
| Msa0182990 | MtrunA17_Chr3g0138451 | 33.010 | 103 | 42 | 2 | 252 | 327 | 259 | 361 | 1.04e-11 | 65.5 |
| Msa0182990 | MtrunA17_Chr1g0167811 | 36.709 | 79 | 47 | 2 | 255 | 330 | 93 | 171 | 1.28e-11 | 64.7 |
| Msa0182990 | MtrunA17_Chr3g0086891 | 35.789 | 95 | 55 | 3 | 233 | 323 | 348 | 440 | 3.42e-11 | 63.9 |
| Msa0182990 | MtrunA17_Chr7g0273051 | 37.662 | 77 | 37 | 3 | 254 | 323 | 89 | 161 | 6.75e-11 | 62.8 |
| Msa0182990 | MtrunA17_Chr3g0102761 | 34.043 | 94 | 49 | 2 | 243 | 323 | 234 | 327 | 9.45e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182990 | AT3G19910.1 | 62.069 | 261 | 92 | 1 | 72 | 332 | 84 | 337 | 5.28e-102 | 303 |
| Msa0182990 | AT3G19910.2 | 53.846 | 156 | 65 | 1 | 72 | 227 | 84 | 232 | 1.94e-36 | 132 |
| Msa0182990 | AT3G63530.2 | 41.341 | 179 | 83 | 7 | 158 | 327 | 76 | 241 | 6.12e-33 | 122 |
| Msa0182990 | AT3G63530.1 | 41.341 | 179 | 83 | 7 | 158 | 327 | 76 | 241 | 6.12e-33 | 122 |
| Msa0182990 | AT3G47180.1 | 46.939 | 98 | 49 | 3 | 235 | 330 | 114 | 210 | 8.59e-24 | 97.4 |
| Msa0182990 | AT5G52140.1 | 40.187 | 107 | 54 | 2 | 231 | 327 | 172 | 278 | 1.14e-18 | 85.1 |
| Msa0182990 | AT3G15070.1 | 37.500 | 112 | 62 | 2 | 223 | 326 | 360 | 471 | 2.07e-16 | 80.5 |
| Msa0182990 | AT3G15070.2 | 37.500 | 112 | 62 | 2 | 223 | 326 | 360 | 471 | 2.07e-16 | 80.5 |
| Msa0182990 | AT5G10650.1 | 40.000 | 100 | 53 | 3 | 233 | 325 | 418 | 517 | 7.59e-15 | 75.9 |
| Msa0182990 | AT5G10650.2 | 40.000 | 100 | 53 | 3 | 233 | 325 | 418 | 517 | 7.59e-15 | 75.9 |
| Msa0182990 | AT2G15530.6 | 40.000 | 100 | 55 | 2 | 233 | 327 | 579 | 678 | 8.66e-15 | 75.9 |
| Msa0182990 | AT2G15530.5 | 40.000 | 100 | 55 | 2 | 233 | 327 | 601 | 700 | 9.55e-15 | 75.5 |
| Msa0182990 | AT2G15530.3 | 40.000 | 100 | 55 | 2 | 233 | 327 | 601 | 700 | 9.55e-15 | 75.5 |
| Msa0182990 | AT2G15530.2 | 40.000 | 100 | 55 | 2 | 233 | 327 | 601 | 700 | 9.55e-15 | 75.5 |
| Msa0182990 | AT2G15530.1 | 40.000 | 100 | 55 | 2 | 233 | 327 | 601 | 700 | 9.55e-15 | 75.5 |
| Msa0182990 | AT2G15530.7 | 40.000 | 100 | 55 | 2 | 233 | 327 | 601 | 700 | 9.55e-15 | 75.5 |
| Msa0182990 | AT4G34040.1 | 38.542 | 96 | 55 | 2 | 233 | 325 | 567 | 661 | 1.06e-14 | 75.5 |
| Msa0182990 | AT1G53190.2 | 36.190 | 105 | 55 | 3 | 233 | 326 | 382 | 485 | 1.18e-14 | 75.1 |
| Msa0182990 | AT1G53190.1 | 36.190 | 105 | 55 | 3 | 233 | 326 | 382 | 485 | 1.18e-14 | 75.1 |
| Msa0182990 | AT5G42940.2 | 35.849 | 106 | 65 | 2 | 223 | 325 | 574 | 679 | 1.27e-14 | 75.1 |
| Msa0182990 | AT5G42940.1 | 35.849 | 106 | 65 | 2 | 223 | 325 | 574 | 679 | 1.27e-14 | 75.1 |
| Msa0182990 | AT4G31450.1 | 36.275 | 102 | 54 | 2 | 233 | 323 | 387 | 488 | 2.22e-13 | 71.2 |
| Msa0182990 | AT4G31450.2 | 36.275 | 102 | 54 | 2 | 233 | 323 | 387 | 488 | 2.22e-13 | 71.2 |
| Msa0182990 | AT5G24870.3 | 35.616 | 146 | 72 | 6 | 201 | 325 | 366 | 510 | 9.25e-13 | 69.3 |
| Msa0182990 | AT5G24870.1 | 35.616 | 146 | 72 | 6 | 201 | 325 | 366 | 510 | 9.25e-13 | 69.3 |
| Msa0182990 | AT5G24870.2 | 35.616 | 146 | 72 | 6 | 201 | 325 | 366 | 510 | 9.25e-13 | 69.3 |
| Msa0182990 | AT5G52150.1 | 31.481 | 162 | 80 | 4 | 183 | 319 | 45 | 200 | 1.72e-12 | 65.9 |
| Msa0182990 | AT5G67120.1 | 32.847 | 137 | 82 | 4 | 193 | 327 | 143 | 271 | 1.99e-12 | 67.0 |
| Msa0182990 | AT1G45180.1 | 35.849 | 106 | 65 | 2 | 223 | 325 | 529 | 634 | 2.53e-12 | 68.2 |
| Msa0182990 | AT1G45180.3 | 35.849 | 106 | 65 | 2 | 223 | 325 | 529 | 634 | 2.53e-12 | 68.2 |
| Msa0182990 | AT1G45180.4 | 35.849 | 106 | 65 | 2 | 223 | 325 | 529 | 634 | 2.53e-12 | 68.2 |
| Msa0182990 | AT2G15530.4 | 38.947 | 95 | 53 | 2 | 233 | 322 | 601 | 695 | 2.55e-12 | 68.2 |
| Msa0182990 | AT1G45180.2 | 35.849 | 106 | 65 | 2 | 223 | 325 | 481 | 586 | 3.25e-12 | 67.8 |
| Msa0182990 | AT1G73760.1 | 28.659 | 164 | 102 | 5 | 169 | 325 | 206 | 361 | 3.49e-12 | 67.0 |
| Msa0182990 | AT5G27420.1 | 38.750 | 80 | 46 | 3 | 252 | 328 | 91 | 170 | 5.45e-12 | 66.6 |
| Msa0182990 | AT1G80400.1 | 33.051 | 118 | 51 | 3 | 243 | 332 | 287 | 404 | 2.86e-11 | 64.7 |
| Msa0182990 | AT5G07225.1 | 38.889 | 72 | 40 | 1 | 256 | 327 | 165 | 232 | 3.49e-11 | 62.8 |
| Msa0182990 | AT3G05200.1 | 37.662 | 77 | 45 | 3 | 250 | 323 | 93 | 169 | 5.61e-11 | 63.5 |
Find 117 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAACCTTTATTTCATTTA+TGG | 0.106711 | 1_4:-71768204 | Msa0182990:three_prime_UTR |
| TCATTTATGGAAATGATTAT+TGG | 0.189542 | 1_4:-71768191 | Msa0182990:three_prime_UTR |
| AATAATGATGGAAGCGATTA+TGG | 0.223898 | 1_4:-71774425 | Msa0182990:CDS |
| GCTAGACTGCTTGCTCTTGC+TGG | 0.227247 | 1_4:-71774131 | Msa0182990:CDS |
| CATTTATGGAAATGATTATT+GGG | 0.280488 | 1_4:-71768190 | Msa0182990:three_prime_UTR |
| CATTTCCATAAATGAAATAA+AGG | 0.282344 | 1_4:+71768199 | None:intergenic |
| TCTCCATTGGAATTAGGAAT+TGG | 0.323443 | 1_4:+71775317 | None:intergenic |
| ATGTTAGGTGTGTCATTTGC+CGG | 0.329809 | 1_4:-71770438 | Msa0182990:intron |
| TTCTTCGCGGATGTGATTGT+TGG | 0.335779 | 1_4:+71775228 | None:intergenic |
| TGTCGTTCTCCATTGGAATT+AGG | 0.336142 | 1_4:+71775311 | None:intergenic |
| AGCCTATGCAAGAGCATTGC+AGG | 0.357325 | 1_4:-71774177 | Msa0182990:CDS |
| GGGAGGAATCAGACTAATTA+TGG | 0.359923 | 1_4:-71768284 | Msa0182990:three_prime_UTR |
| AGTACAGAGGTATCTGCTTC+TGG | 0.365519 | 1_4:-71768544 | Msa0182990:CDS |
| GAGATTAGTGAAAGGAGTTC+TGG | 0.369414 | 1_4:+71775087 | None:intergenic |
| CTGGTAATGCTATTAAAATA+AGG | 0.389985 | 1_4:+71768444 | None:intergenic |
| ACCTAATTCTGCAGGATGCT+TGG | 0.391708 | 1_4:-71770770 | Msa0182990:intron |
| TTAATTGCAACATGTAACTT+TGG | 0.392205 | 1_4:-71768371 | Msa0182990:three_prime_UTR |
| TAATTGCAACATGTAACTTT+GGG | 0.392660 | 1_4:-71768370 | Msa0182990:three_prime_UTR |
| GATACCTCTGTACTGCAAAC+AGG | 0.394321 | 1_4:+71768553 | None:intergenic |
| ATAGTTGACTGAAGGTAAAC+AGG | 0.410491 | 1_4:+71770571 | None:intergenic |
| TACTTTGGCCGTGCCGTTGT+TGG | 0.410511 | 1_4:+71775279 | None:intergenic |
| CCTAATTCTGCAGGATGCTT+GGG | 0.412708 | 1_4:-71770769 | Msa0182990:intron |
| ATGGAAGCGATTATGGAAGT+TGG | 0.413021 | 1_4:-71774418 | Msa0182990:CDS |
| ACCTCATACGAAAGTTCATC+TGG | 0.416426 | 1_4:+71770735 | None:intergenic |
| TTAATAGCATTACCAGTATG+AGG | 0.417603 | 1_4:-71768437 | Msa0182990:three_prime_UTR |
| TCCAGATGAACTTTCGTATG+AGG | 0.418848 | 1_4:-71770736 | Msa0182990:intron |
| CTCCATTGGAATTAGGAATT+GGG | 0.433312 | 1_4:+71775318 | None:intergenic |
| CGCTCGAACCCTTCAAGAGC+AGG | 0.437908 | 1_4:-71775038 | Msa0182990:intron |
| TGCTTCTGGGAGCAACTTGT+AGG | 0.442879 | 1_4:-71768530 | Msa0182990:exon |
| CAACCAGTTGTTAATGCACT+CGG | 0.442987 | 1_4:+71770357 | None:intergenic |
| CTCCGGGTCATATTCAATGA+TGG | 0.447363 | 1_4:+71774217 | None:intergenic |
| CTAGACTGCTTGCTCTTGCT+GGG | 0.457138 | 1_4:-71774130 | Msa0182990:CDS |
| TGGAAGCGATTATGGAAGTT+GGG | 0.457946 | 1_4:-71774417 | Msa0182990:CDS |
| AAAGTAGGTTCAGGCGGAGG+AGG | 0.458080 | 1_4:-71775262 | Msa0182990:CDS |
| GTAGGTTCAGGCGGAGGAGG+AGG | 0.459226 | 1_4:-71775259 | Msa0182990:CDS |
| TCTGGAAGGTTGTTGAGCAT+TGG | 0.462941 | 1_4:+71775105 | None:intergenic |
| GCGGTGGTGTCGTTCTCCAT+TGG | 0.463189 | 1_4:+71775304 | None:intergenic |
| GAAGCGGAACAACAACAAAC+TGG | 0.466222 | 1_4:-71775136 | Msa0182990:CDS |
| ATCCCGAGTGCATTAACAAC+TGG | 0.466761 | 1_4:-71770360 | Msa0182990:CDS |
| GTACAGAGGTATCTGCTTCT+GGG | 0.470432 | 1_4:-71768543 | Msa0182990:CDS |
| GGAGGCTGAAGAGAGGGAAA+TGG | 0.474019 | 1_4:-71774156 | Msa0182990:CDS |
| GACTGAACGAATATGAATAG+AGG | 0.482995 | 1_4:+71775354 | None:intergenic |
| GGCCGTGCCGTTGTTGGTGG+CGG | 0.483120 | 1_4:+71775285 | None:intergenic |
| TTCCCAATTCCTAATTCCAA+TGG | 0.484151 | 1_4:-71775320 | Msa0182990:exon |
| GGAACTATTGGCACTGGGTG+AGG | 0.488720 | 1_4:-71770636 | Msa0182990:CDS |
| CAGAGACTATCTCCTCATAC+TGG | 0.488884 | 1_4:+71768425 | None:intergenic |
| CCTTCAGTCAACTATAAGAC+GGG | 0.489799 | 1_4:-71770563 | Msa0182990:CDS |
| GGCACGGCCAAAGTAGGTTC+AGG | 0.489935 | 1_4:-71775271 | Msa0182990:CDS |
| CGTGCCGTTGTTGGTGGCGG+TGG | 0.490698 | 1_4:+71775288 | None:intergenic |
| CACCGCCACCAACAACGGCA+CGG | 0.492055 | 1_4:-71775287 | Msa0182990:CDS |
| AGATGGGAACCTGCTCTTGA+AGG | 0.494211 | 1_4:+71775029 | None:intergenic |
| GAAGGGTTCGAGCGAGGGCG+AGG | 0.499022 | 1_4:+71775047 | None:intergenic |
| CTCTTGAAGGGTTCGAGCGA+GGG | 0.500876 | 1_4:+71775042 | None:intergenic |
| CTCCAACACTAGCATGATCA+TGG | 0.510931 | 1_4:+71774255 | None:intergenic |
| GATTATGGAAGTTGGGAGGG+TGG | 0.512392 | 1_4:-71774410 | Msa0182990:CDS |
| TCCTCCGCCTGAACCTACTT+TGG | 0.513247 | 1_4:+71775264 | None:intergenic |
| GATGGGAACCTGCTCTTGAA+GGG | 0.513707 | 1_4:+71775030 | None:intergenic |
| TACAGAGGACGCTGAGGACA+TGG | 0.514409 | 1_4:-71774005 | Msa0182990:intron |
| TGTTAGGTGTGTCATTTGCC+GGG | 0.515770 | 1_4:-71770437 | Msa0182990:intron |
| GGCATTATAGTGGTCAGGTA+TGG | 0.516359 | 1_4:-71768308 | Msa0182990:three_prime_UTR |
| TGACTGGCATTATAGTGGTC+AGG | 0.518410 | 1_4:-71768313 | Msa0182990:three_prime_UTR |
| TTGGCACTGGGTGAGGTAGT+TGG | 0.520946 | 1_4:-71770629 | Msa0182990:CDS |
| TTTGGCCGTGCCGTTGTTGG+TGG | 0.530096 | 1_4:+71775282 | None:intergenic |
| GGAGCATGCTGCTAACTCTC+AGG | 0.533621 | 1_4:-71773981 | Msa0182990:intron |
| ATGCTGAGAATGAATAATGA+TGG | 0.536427 | 1_4:-71774437 | Msa0182990:CDS |
| GCTCTTGAAGGGTTCGAGCG+AGG | 0.537045 | 1_4:+71775041 | None:intergenic |
| ATTATGGAAGTTGGGAGGGT+GGG | 0.538505 | 1_4:-71774409 | Msa0182990:CDS |
| TGGAATGACTGGCATTATAG+TGG | 0.541670 | 1_4:-71768318 | Msa0182990:three_prime_UTR |
| CAATGATGGGATTATTCTCA+CGG | 0.544591 | 1_4:+71774231 | None:intergenic |
| TCATCACTTGAAAACAACTC+CGG | 0.545489 | 1_4:+71774200 | None:intergenic |
| GACACCACCGCCACCAACAA+CGG | 0.548317 | 1_4:-71775292 | Msa0182990:CDS |
| GCCAAAGTAGGTTCAGGCGG+AGG | 0.552285 | 1_4:-71775265 | Msa0182990:CDS |
| TCCGGGTCATATTCAATGAT+GGG | 0.552762 | 1_4:+71774218 | None:intergenic |
| CATCACTTGAAAACAACTCC+GGG | 0.557757 | 1_4:+71774201 | None:intergenic |
| TTATAGTGGTCAGGTATGGC+GGG | 0.557797 | 1_4:-71768304 | Msa0182990:three_prime_UTR |
| GGGCGAGGTCAGCATCGACT+TGG | 0.558596 | 1_4:+71775062 | None:intergenic |
| GCTTCTGGGAGCAACTTGTA+GGG | 0.565805 | 1_4:-71768529 | Msa0182990:exon |
| AATTCTGCAGGATGCTTGGG+AGG | 0.567771 | 1_4:-71770766 | Msa0182990:intron |
| CTCCTGCAATGCTCTTGCAT+AGG | 0.568823 | 1_4:+71774175 | None:intergenic |
| ATTATAGTGGTCAGGTATGG+CGG | 0.568846 | 1_4:-71768305 | Msa0182990:three_prime_UTR |
| CATTGCAGGAGGCTGAAGAG+AGG | 0.568884 | 1_4:-71774163 | Msa0182990:CDS |
| AACCAGTTGTTAATGCACTC+GGG | 0.569220 | 1_4:+71770358 | None:intergenic |
| ACCTTCAGTCAACTATAAGA+CGG | 0.571635 | 1_4:-71770564 | Msa0182990:CDS |
| CATTTGCCGGGTAGACTATG+AGG | 0.572314 | 1_4:-71770425 | Msa0182990:CDS |
| CATCATCCTCATAGTCTACC+CGG | 0.573652 | 1_4:+71770419 | None:intergenic |
| ATTGCAGGAGGCTGAAGAGA+GGG | 0.573702 | 1_4:-71774162 | Msa0182990:CDS |
| TTAGTGAAAGGAGTTCTGGA+AGG | 0.576434 | 1_4:+71775091 | None:intergenic |
| AGCGATTATGGAAGTTGGGA+GGG | 0.580819 | 1_4:-71774413 | Msa0182990:CDS |
| GTCCATGATCATGCTAGTGT+TGG | 0.587188 | 1_4:-71774257 | Msa0182990:CDS |
| AAGACGGGGAGTGATCAACT+TGG | 0.589105 | 1_4:-71770548 | Msa0182990:CDS |
| ACTGAACGAATATGAATAGA+GGG | 0.589398 | 1_4:+71775355 | None:intergenic |
| TGATTATTGGGAATGTGACA+TGG | 0.595645 | 1_4:-71768178 | Msa0182990:three_prime_UTR |
| ATACCTCTGTACTGCAAACA+GGG | 0.600451 | 1_4:+71768554 | None:intergenic |
| CTTGCATGAAAGAACTGTCA+AGG | 0.606475 | 1_4:+71770393 | None:intergenic |
| AAGCGATTATGGAAGTTGGG+AGG | 0.609143 | 1_4:-71774414 | Msa0182990:CDS |
| TCCCATCATTGAATATGACC+CGG | 0.611564 | 1_4:-71774219 | Msa0182990:CDS |
| AGTTGTTAATGCACTCGGGA+TGG | 0.616730 | 1_4:+71770362 | None:intergenic |
| TTCAATTACAGAGGACGCTG+AGG | 0.617482 | 1_4:-71774011 | Msa0182990:intron |
| AACAACGGCACGGCCAAAGT+AGG | 0.619530 | 1_4:-71775277 | Msa0182990:CDS |
| CCCGTCTTATAGTTGACTGA+AGG | 0.619552 | 1_4:+71770563 | None:intergenic |
| ACATGTTGCAATTAAAACGA+AGG | 0.624651 | 1_4:+71768379 | None:intergenic |
| GGGAGCTATTTGCATGACGA+TGG | 0.625001 | 1_4:-71774389 | Msa0182990:CDS |
| CAACTGGTTGAAAATAAACA+AGG | 0.625740 | 1_4:-71770344 | Msa0182990:intron |
| AGACGGGGAGTGATCAACTT+GGG | 0.627017 | 1_4:-71770547 | Msa0182990:CDS |
| TTGCCCTGTTTGCAGTACAG+AGG | 0.629471 | 1_4:-71768557 | Msa0182990:CDS |
| GTAGTTGGAACTGAGAGCAG+AGG | 0.640610 | 1_4:-71770614 | Msa0182990:CDS |
| AGAAAACGATGAACACGAAG+CGG | 0.646976 | 1_4:-71775152 | Msa0182990:CDS |
| CTATGCAAGAGCATTGCAGG+AGG | 0.655897 | 1_4:-71774174 | Msa0182990:CDS |
| ACGGCCAAAGTAGGTTCAGG+CGG | 0.658328 | 1_4:-71775268 | Msa0182990:CDS |
| TAGTGGTCAGGTATGGCGGG+AGG | 0.665898 | 1_4:-71768301 | Msa0182990:three_prime_UTR |
| CTTCAGTCAACTATAAGACG+GGG | 0.670139 | 1_4:-71770562 | Msa0182990:CDS |
| ACTTGGCTGAGATTAGTGAA+AGG | 0.671872 | 1_4:+71775079 | None:intergenic |
| GATTATTGGGAATGTGACAT+GGG | 0.674410 | 1_4:-71768177 | Msa0182990:three_prime_UTR |
| TGAAGACGATGACAATGAGG+AGG | 0.677744 | 1_4:-71774312 | Msa0182990:CDS |
| CGGCACTGATGTAGATGACG+AGG | 0.682726 | 1_4:-71774342 | Msa0182990:CDS |
| AGAGGACGCTGAGGACATGG+AGG | 0.702601 | 1_4:-71774002 | Msa0182990:CDS |
| TGATGAAGACGATGACAATG+AGG | 0.714523 | 1_4:-71774315 | Msa0182990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTATTTATAATAATC+TGG | + | chr1_4:71768602-71768621 | None:intergenic | 10.0% |
| !! | TTCAAATTCAATAAATAAAA+AGG | + | chr1_4:71768752-71768771 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTTTGAGTAA+CGG | - | chr1_4:71769664-71769683 | Msa0182990:intron | 10.0% |
| !!! | TATTACGATAATATTTTAAT+AGG | + | chr1_4:71769762-71769781 | None:intergenic | 10.0% |
| !! | TTTAACAAATAAGTATTAAT+AGG | - | chr1_4:71771545-71771564 | Msa0182990:intron | 10.0% |
| !! | TTTATTATTACTATTAATAC+GGG | + | chr1_4:71772479-71772498 | None:intergenic | 10.0% |
| !! | AATAGTAATAATAAAATCTT+TGG | - | chr1_4:71772484-71772503 | Msa0182990:intron | 10.0% |
| !!! | TTTTAAAAGAAAAAAGAAAA+TGG | + | chr1_4:71775248-71775267 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTGAGTAAC+GGG | - | chr1_4:71769665-71769684 | Msa0182990:intron | 15.0% |
| !!! | TTTAAAGTAGATATTTTCTT+TGG | - | chr1_4:71769718-71769737 | Msa0182990:intron | 15.0% |
| !!! | CTTTGATTTTCTTAAAAAAA+TGG | - | chr1_4:71770229-71770248 | Msa0182990:intron | 15.0% |
| !!! | AAATCTTCTAAAATTCATTA+GGG | + | chr1_4:71770353-71770372 | None:intergenic | 15.0% |
| !!! | TTTTTATTACATATTGTAAC+TGG | + | chr1_4:71770581-71770600 | None:intergenic | 15.0% |
| !! | TTATTAAAACATATTGTAAC+TGG | + | chr1_4:71770616-71770635 | None:intergenic | 15.0% |
| !! | TAAGTACTATATTAGAATTT+AGG | - | chr1_4:71772123-71772142 | Msa0182990:intron | 15.0% |
| !! | AAGAAATTAAGATAATTAGT+TGG | + | chr1_4:71772511-71772530 | None:intergenic | 15.0% |
| !!! | TCTCATGTTTTAATTATTTT+AGG | - | chr1_4:71772818-71772837 | Msa0182990:intron | 15.0% |
| !!! | TTAATTATTTTAGGAACTAT+TGG | - | chr1_4:71772827-71772846 | Msa0182990:intron | 15.0% |
| !!! | CATTTTTTAAAAATGGTATT+AGG | + | chr1_4:71773584-71773603 | None:intergenic | 15.0% |
| !!! | CTAATACCATTTTTAAAAAA+TGG | - | chr1_4:71773582-71773601 | Msa0182990:intron | 15.0% |
| !! | ATTGTAAAAGAAATAATGAA+TGG | + | chr1_4:71773854-71773873 | None:intergenic | 15.0% |
| !!! | AAACCTTCATTTTTTATAAA+TGG | + | chr1_4:71774468-71774487 | None:intergenic | 15.0% |
| !!! | TATAAAAAATGAAGGTTTTT+TGG | - | chr1_4:71774470-71774489 | Msa0182990:intron | 15.0% |
| !! | TATATTATGATATAAATCTC+TGG | - | chr1_4:71774751-71774770 | Msa0182990:intron | 15.0% |
| !! | CGAATTTAAAAATGAAATTA+TGG | - | chr1_4:71775323-71775342 | Msa0182990:exon | 15.0% |
| !! | ACAAAACAAAAAAAAGATTT+AGG | - | chr1_4:71775374-71775393 | Msa0182990:five_prime_UTR | 15.0% |
| !!! | AGCAATTTAAAGCATAATTA+GGG | + | chr1_4:71768632-71768651 | None:intergenic | 20.0% |
| !!! | AAGCAATTTAAAGCATAATT+AGG | + | chr1_4:71768633-71768652 | None:intergenic | 20.0% |
| !! | GAATTATATAAGATAAGGAA+TGG | - | chr1_4:71768853-71768872 | Msa0182990:intron | 20.0% |
| !! | TATTTATACTGAAAAACCAA+GGG | - | chr1_4:71768919-71768938 | Msa0182990:intron | 20.0% |
| !!! | GTTTCATTTTGTAATTGAAT+AGG | - | chr1_4:71769001-71769020 | Msa0182990:intron | 20.0% |
| !!! | ATTTTGTAATTGAATAGGAA+AGG | - | chr1_4:71769006-71769025 | Msa0182990:intron | 20.0% |
| !!! | TTTTGTAATTGAATAGGAAA+GGG | - | chr1_4:71769007-71769026 | Msa0182990:intron | 20.0% |
| !! | AATGTCAATACCATATAATT+AGG | - | chr1_4:71769638-71769657 | Msa0182990:intron | 20.0% |
| !! | ATGTCAATACCATATAATTA+GGG | - | chr1_4:71769639-71769658 | Msa0182990:intron | 20.0% |
| !! | AAAATATTCCCCTAATTATA+TGG | + | chr1_4:71769651-71769670 | None:intergenic | 20.0% |
| !!! | CAAATCTTCTAAAATTCATT+AGG | + | chr1_4:71770354-71770373 | None:intergenic | 20.0% |
| !!! | TTTTTTAATAAAAAGACAGC+CGG | - | chr1_4:71770552-71770571 | Msa0182990:CDS | 20.0% |
| !!! | ATGTTTTAATAAAGATGATG+TGG | - | chr1_4:71770624-71770643 | Msa0182990:CDS | 20.0% |
| !! | AAATTTACTTGTAGTGAAAT+AGG | + | chr1_4:71771407-71771426 | None:intergenic | 20.0% |
| !!! | TCTAGTTTCTTTGTTTTTTT+GGG | + | chr1_4:71771862-71771881 | None:intergenic | 20.0% |
| !!! | TTCTAGTTTCTTTGTTTTTT+TGG | + | chr1_4:71771863-71771882 | None:intergenic | 20.0% |
| !! | AAAAAAACAAAGAAACTAGA+AGG | - | chr1_4:71771862-71771881 | Msa0182990:intron | 20.0% |
| !! | AAAAAACAAAGAAACTAGAA+GGG | - | chr1_4:71771863-71771882 | Msa0182990:intron | 20.0% |
| !!! | AATCATCTATTTTTTTGTCA+GGG | + | chr1_4:71772237-71772256 | None:intergenic | 20.0% |
| !!! | CATAGTAATATTTTATCTTC+AGG | + | chr1_4:71772398-71772417 | None:intergenic | 20.0% |
| !!! | AGAGAAATTTTGACTTTAAA+TGG | + | chr1_4:71772534-71772553 | None:intergenic | 20.0% |
| !!! | GATTCTCTTCATAATTTTTA+TGG | - | chr1_4:71772558-71772577 | Msa0182990:intron | 20.0% |
| !!! | CACTTTCCATTTTTTAAAAA+TGG | + | chr1_4:71773591-71773610 | None:intergenic | 20.0% |
| !!! | AGTTACTATTATTTTGTTAG+TGG | - | chr1_4:71773623-71773642 | Msa0182990:intron | 20.0% |
| !!! | GTTACTATTATTTTGTTAGT+GGG | - | chr1_4:71773624-71773643 | Msa0182990:intron | 20.0% |
| !!! | TTACTATTATTTTGTTAGTG+GGG | - | chr1_4:71773625-71773644 | Msa0182990:intron | 20.0% |
| !! | TAGTGAAGATATTTAACATT+GGG | + | chr1_4:71773812-71773831 | None:intergenic | 20.0% |
| !! | ATAGTGAAGATATTTAACAT+TGG | + | chr1_4:71773813-71773832 | None:intergenic | 20.0% |
| !!! | AAATAAGTAGATTTGAAACA+TGG | + | chr1_4:71773915-71773934 | None:intergenic | 20.0% |
| !! | AGATATTTAAGAAATTAGTG+TGG | - | chr1_4:71773972-71773991 | Msa0182990:intron | 20.0% |
| !!! | TAATATTCAACTTTTGATCA+AGG | + | chr1_4:71774331-71774350 | None:intergenic | 20.0% |
| !! | TGATCAAAAGTTGAATATTA+AGG | - | chr1_4:71774331-71774350 | Msa0182990:CDS | 20.0% |
| !!! | ATGCCATTTATAAAAAATGA+AGG | - | chr1_4:71774462-71774481 | Msa0182990:intron | 20.0% |
| !!! | TGTACAAATTTTCTTCAATT+TGG | + | chr1_4:71774992-71775011 | None:intergenic | 20.0% |
| !!! | TCTTGATTGTCTTATTTTAA+TGG | - | chr1_4:71775137-71775156 | Msa0182990:CDS | 20.0% |
| !!! | GTAAACCTTTATTTCATTTA+TGG | - | chr1_4:71775271-71775290 | Msa0182990:CDS | 20.0% |
| !! | CATTTCCATAAATGAAATAA+AGG | + | chr1_4:71775279-71775298 | None:intergenic | 20.0% |
| !! | TCATTTATGGAAATGATTAT+TGG | - | chr1_4:71775284-71775303 | Msa0182990:CDS | 20.0% |
| !! | CATTTATGGAAATGATTATT+GGG | - | chr1_4:71775285-71775304 | Msa0182990:CDS | 20.0% |
| ! | TGATAGAATAAGAAGAAGAT+GGG | + | chr1_4:71768465-71768484 | None:intergenic | 25.0% |
| ! | TGTTAAGCAAATACTAAACA+TGG | - | chr1_4:71768716-71768735 | Msa0182990:intron | 25.0% |
| ! | GGACTGAATTATATAAGATA+AGG | - | chr1_4:71768848-71768867 | Msa0182990:intron | 25.0% |
| !!! | AACTTATTTTCGTAGCATTT+TGG | - | chr1_4:71768891-71768910 | Msa0182990:intron | 25.0% |
| !!! | ACTTATTTTCGTAGCATTTT+GGG | - | chr1_4:71768892-71768911 | Msa0182990:intron | 25.0% |
| ! | GTATTTATACTGAAAAACCA+AGG | - | chr1_4:71768918-71768937 | Msa0182990:intron | 25.0% |
| ! | TGTCAATACCATATAATTAG+GGG | - | chr1_4:71769640-71769659 | Msa0182990:intron | 25.0% |
| !!! | AACTAATCTGTTTTTCTAAG+AGG | + | chr1_4:71770030-71770049 | None:intergenic | 25.0% |
| ! | ATATGTAATAAAAAGACAGC+CGG | - | chr1_4:71770587-71770606 | Msa0182990:CDS | 25.0% |
| ! | ATCATTCGATAAAAGAGTAA+TGG | + | chr1_4:71770697-71770716 | None:intergenic | 25.0% |
| !!! | GTATTTGAGGATGTTTTATT+AGG | - | chr1_4:71770726-71770745 | Msa0182990:intron | 25.0% |
| ! | TGTTATTGATGTTTGTGTTA+AGG | + | chr1_4:71771083-71771102 | None:intergenic | 25.0% |
| !!! | TTAATAGGCTTTGTTGTTAT+AGG | + | chr1_4:71771456-71771475 | None:intergenic | 25.0% |
| ! | ATAACAACAAAGCCTATTAA+CGG | - | chr1_4:71771456-71771475 | Msa0182990:intron | 25.0% |
| ! | ACAAATAAGTATTAATAGGC+CGG | - | chr1_4:71771549-71771568 | Msa0182990:intron | 25.0% |
| ! | ACTTTCTTGGAAATTGAAAA+AGG | - | chr1_4:71771939-71771958 | Msa0182990:intron | 25.0% |
| ! | TGAATCATATATCTGCTATT+GGG | + | chr1_4:71772101-71772120 | None:intergenic | 25.0% |
| !!! | GTATGCATTATAGAGTATTT+TGG | - | chr1_4:71772189-71772208 | Msa0182990:intron | 25.0% |
| !!! | CAATCATCTATTTTTTTGTC+AGG | + | chr1_4:71772238-71772257 | None:intergenic | 25.0% |
| ! | TAAATAATTGTATCTCGTAG+TGG | - | chr1_4:71772296-71772315 | Msa0182990:intron | 25.0% |
| ! | AAATAATTGTATCTCGTAGT+GGG | - | chr1_4:71772297-71772316 | Msa0182990:intron | 25.0% |
| !! | TGTTTTCAAACATCAAATTG+AGG | + | chr1_4:71772422-71772441 | None:intergenic | 25.0% |
| ! | TCAATTTGATGTTTGAAAAC+AGG | - | chr1_4:71772421-71772440 | Msa0182990:intron | 25.0% |
| !!! | GGATTGATATACACTTTTTT+TGG | - | chr1_4:71772612-71772631 | Msa0182990:intron | 25.0% |
| ! | ACAGCTAAATGTAAATGATT+GGG | + | chr1_4:71773192-71773211 | None:intergenic | 25.0% |
| ! | TACAGCTAAATGTAAATGAT+TGG | + | chr1_4:71773193-71773212 | None:intergenic | 25.0% |
| ! | ATGCATCATTTAACTGATTA+AGG | + | chr1_4:71773317-71773336 | None:intergenic | 25.0% |
| !! | TCAAGTTCAAGAATTTTTGT+AGG | - | chr1_4:71773543-71773562 | Msa0182990:intron | 25.0% |
| ! | TTAAAAATGGTATTAGGAAC+TGG | + | chr1_4:71773578-71773597 | None:intergenic | 25.0% |
| !!! | TACTATTATTTTGTTAGTGG+GGG | - | chr1_4:71773626-71773645 | Msa0182990:intron | 25.0% |
| !!! | CAGACTAAATCAAAAGTATT+AGG | + | chr1_4:71773703-71773722 | None:intergenic | 25.0% |
| ! | ATAGCAAGATGATATTGTTT+GGG | + | chr1_4:71773744-71773763 | None:intergenic | 25.0% |
| ! | AATAGCAAGATGATATTGTT+TGG | + | chr1_4:71773745-71773764 | None:intergenic | 25.0% |
| !! | TTTGAAACATTTCACATGTA+TGG | - | chr1_4:71773997-71774016 | Msa0182990:CDS | 25.0% |
| ! | AGCGCATAAATAATATGTAA+TGG | + | chr1_4:71774039-71774058 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr1_4:71774174-71774193 | Msa0182990:CDS | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr1_4:71774214-71774233 | None:intergenic | 25.0% |
| ! | TCAACCAACAGAAAATTATA+AGG | - | chr1_4:71774509-71774528 | Msa0182990:intron | 25.0% |
| ! | CAACCAACAGAAAATTATAA+GGG | - | chr1_4:71774510-71774529 | Msa0182990:intron | 25.0% |
| ! | AACCAACAGAAAATTATAAG+GGG | - | chr1_4:71774511-71774530 | Msa0182990:intron | 25.0% |
| ! | AAAATTATAAGGGGTCAATA+AGG | - | chr1_4:71774520-71774539 | Msa0182990:intron | 25.0% |
| !! | ATTTACATTTAAGGCCAAAA+GGG | + | chr1_4:71774577-71774596 | None:intergenic | 25.0% |
| !! | TATTTACATTTAAGGCCAAA+AGG | + | chr1_4:71774578-71774597 | None:intergenic | 25.0% |
| ! | GTAAATAAAATTATAAGCCC+AGG | - | chr1_4:71774591-71774610 | Msa0182990:intron | 25.0% |
| ! | AAAAGAGAAGTTCAATAGAA+TGG | + | chr1_4:71774722-71774741 | None:intergenic | 25.0% |
| !! | CAAATTTTCTTCAATTTGGA+AGG | + | chr1_4:71774988-71775007 | None:intergenic | 25.0% |
| !! | CTGGTAATGCTATTAAAATA+AGG | + | chr1_4:71775034-71775053 | None:intergenic | 25.0% |
| ! | TTAATTGCAACATGTAACTT+TGG | - | chr1_4:71775104-71775123 | Msa0182990:CDS | 25.0% |
| ! | TAATTGCAACATGTAACTTT+GGG | - | chr1_4:71775105-71775124 | Msa0182990:CDS | 25.0% |
| !!! | TCTTATTTTAATGGAATGAC+TGG | - | chr1_4:71775146-71775165 | Msa0182990:CDS | 25.0% |
| ACTGAACGAATATGAATAGA+GGG | + | chr1_4:71768123-71768142 | None:intergenic | 30.0% | |
| ! | ATTTTCGACGCTATTCAAAT+TGG | + | chr1_4:71768286-71768305 | None:intergenic | 30.0% |
| !!! | TCGTTTTCTTCTAGTTTTTC+TGG | + | chr1_4:71768312-71768331 | None:intergenic | 30.0% |
| GTGATAGAATAAGAAGAAGA+TGG | + | chr1_4:71768466-71768485 | None:intergenic | 30.0% | |
| ! | TGAAGTGAATTGCAAGTTTT+AGG | - | chr1_4:71768542-71768561 | Msa0182990:CDS | 30.0% |
| CCTAACTCATGACTAATATA+GGG | + | chr1_4:71768659-71768678 | None:intergenic | 30.0% | |
| CCTATATTAGTCATGAGTTA+GGG | - | chr1_4:71768657-71768676 | Msa0182990:intron | 30.0% | |
| ACAGTATATAACTTGAAGCT+AGG | + | chr1_4:71768693-71768712 | None:intergenic | 30.0% | |
| TGCATATCTACACTATAAGA+AGG | - | chr1_4:71768806-71768825 | Msa0182990:intron | 30.0% | |
| ATGCTGAGAATGAATAATGA+TGG | - | chr1_4:71769038-71769057 | Msa0182990:intron | 30.0% | |
| ! | AATAATGATGGAAGCGATTA+TGG | - | chr1_4:71769050-71769069 | Msa0182990:intron | 30.0% |
| !! | GATTTTGATGATCTACATGA+CGG | - | chr1_4:71769113-71769132 | Msa0182990:intron | 30.0% |
| ! | AGTTTCGTTTTCAATTACAG+AGG | - | chr1_4:71769455-71769474 | Msa0182990:intron | 30.0% |
| ! | TTTCGTTTTCCAAATTGCAT+GGG | + | chr1_4:71769596-71769615 | None:intergenic | 30.0% |
| GGGTATATTTCATGGTTATT+AGG | - | chr1_4:71769685-71769704 | Msa0182990:intron | 30.0% | |
| ! | TTAAACGCTTTTGAACACTT+GGG | - | chr1_4:71769911-71769930 | Msa0182990:intron | 30.0% |
| !! | GCTTTTAAAAAGTGATGACA+TGG | + | chr1_4:71769948-71769967 | None:intergenic | 30.0% |
| TTCTTCGCTTTCCAATATTT+AGG | - | chr1_4:71770416-71770435 | Msa0182990:CDS | 30.0% | |
| !! | TAAACATTGATTCGGTCATT+TGG | - | chr1_4:71770475-71770494 | Msa0182990:intron | 30.0% |
| !! | AAACATTGATTCGGTCATTT+GGG | - | chr1_4:71770476-71770495 | Msa0182990:intron | 30.0% |
| TTGAACACTTGCTTAAACAT+TGG | + | chr1_4:71770651-71770670 | None:intergenic | 30.0% | |
| TTTATTGCAAATACCGTGAT+TGG | - | chr1_4:71770753-71770772 | Msa0182990:CDS | 30.0% | |
| ! | CCATTAGATTTTTCCAATCA+CGG | + | chr1_4:71770769-71770788 | None:intergenic | 30.0% |
| ! | TTTTATTGTTCCCCTTATGA+AGG | - | chr1_4:71770816-71770835 | Msa0182990:intron | 30.0% |
| TATCTTCTTGACCTTCATAA+GGG | + | chr1_4:71770830-71770849 | None:intergenic | 30.0% | |
| ATATCTTCTTGACCTTCATA+AGG | + | chr1_4:71770831-71770850 | None:intergenic | 30.0% | |
| AGACGACCTCAAAATTATTA+TGG | - | chr1_4:71770953-71770972 | Msa0182990:intron | 30.0% | |
| ! | ATCCTGCCATAATAATTTTG+AGG | + | chr1_4:71770962-71770981 | None:intergenic | 30.0% |
| TTGATGTTTGTGTTAAGGTT+AGG | + | chr1_4:71771078-71771097 | None:intergenic | 30.0% | |
| AACATCAATAACAAGTGTCA+AGG | - | chr1_4:71771090-71771109 | Msa0182990:intron | 30.0% | |
| !!! | AGGCTTGTAATTTTTTTCGT+AGG | + | chr1_4:71771214-71771233 | None:intergenic | 30.0% |
| !! | AGTGAAATAGGCTTTTAAGT+AGG | + | chr1_4:71771395-71771414 | None:intergenic | 30.0% |
| !! | GTTGTTATAGGCTTTTAAGT+AGG | + | chr1_4:71771444-71771463 | None:intergenic | 30.0% |
| CTATCTATTAGTCCGTTAAT+AGG | + | chr1_4:71771471-71771490 | None:intergenic | 30.0% | |
| AAAAGCCTATTAAGCCTAAT+AGG | + | chr1_4:71771575-71771594 | None:intergenic | 30.0% | |
| GAAAGCCTGTTTAGTTAAAT+AGG | + | chr1_4:71771616-71771635 | None:intergenic | 30.0% | |
| TCAAAATACCAAGAGAATAG+AGG | - | chr1_4:71771804-71771823 | Msa0182990:intron | 30.0% | |
| TTGGAAATTGAAAAAGGAGT+AGG | - | chr1_4:71771945-71771964 | Msa0182990:intron | 30.0% | |
| TGGAAATTGAAAAAGGAGTA+GGG | - | chr1_4:71771946-71771965 | Msa0182990:intron | 30.0% | |
| GTGAATCATATATCTGCTAT+TGG | + | chr1_4:71772102-71772121 | None:intergenic | 30.0% | |
| TAATAACAGAATCATCTAGC+TGG | - | chr1_4:71772591-71772610 | Msa0182990:intron | 30.0% | |
| GATCACAACAATATATACTG+TGG | - | chr1_4:71772996-71773015 | Msa0182990:intron | 30.0% | |
| CAACTGGTTGAAAATAAACA+AGG | - | chr1_4:71773131-71773150 | Msa0182990:intron | 30.0% | |
| TAAATGTAAATGATTGGGAG+GGG | + | chr1_4:71773187-71773206 | None:intergenic | 30.0% | |
| CTAAATGTAAATGATTGGGA+GGG | + | chr1_4:71773188-71773207 | None:intergenic | 30.0% | |
| ! | GAATTTAGAATGAAAGCGAA+AGG | + | chr1_4:71773444-71773463 | None:intergenic | 30.0% |
| CGTGCTACATAGATATAATT+TGG | - | chr1_4:71773463-71773482 | Msa0182990:intron | 30.0% | |
| !! | ACTATTATTTTGTTAGTGGG+GGG | - | chr1_4:71773627-71773646 | Msa0182990:intron | 30.0% |
| !! | ATCAAAAGTATTAGGAACTG+AGG | + | chr1_4:71773695-71773714 | None:intergenic | 30.0% |
| ! | TAGATTTGAAACATGGCAAT+TGG | + | chr1_4:71773908-71773927 | None:intergenic | 30.0% |
| TGTAAGAAGAGTAGATCAAA+TGG | - | chr1_4:71774099-71774118 | Msa0182990:intron | 30.0% | |
| ! | TTTTCTAATGGTTTCTCGAA+TGG | + | chr1_4:71774167-71774186 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr1_4:71774179-71774198 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr1_4:71774218-71774237 | Msa0182990:CDS | 30.0% |
| !! | TTGTAGAGTAGCTTTAACTT+TGG | - | chr1_4:71774293-71774312 | Msa0182990:CDS | 30.0% |
| TAACAAGTGAAAGATCTTGA+AGG | - | chr1_4:71774384-71774403 | Msa0182990:CDS | 30.0% | |
| ! | TTATTCTAATGCCCATTTTC+TGG | + | chr1_4:71774419-71774438 | None:intergenic | 30.0% |
| TTGAACAATGACAGAATTCA+AGG | - | chr1_4:71774439-71774458 | Msa0182990:CDS | 30.0% | |
| !! | TAATTTTCTGTTGGTTGAGT+TGG | + | chr1_4:71774507-71774526 | None:intergenic | 30.0% |
| !! | GTCAATAAGGTTTTATCACT+TGG | - | chr1_4:71774533-71774552 | Msa0182990:intron | 30.0% |
| !!! | TTTTTTCTGTTGGTTGAGAT+GGG | + | chr1_4:71774621-71774640 | None:intergenic | 30.0% |
| TGAGACAATCTAAACTAGTA+GGG | + | chr1_4:71774779-71774798 | None:intergenic | 30.0% | |
| ATGAGACAATCTAAACTAGT+AGG | + | chr1_4:71774780-71774799 | None:intergenic | 30.0% | |
| GAAAGTTGTGATATAACACT+CGG | - | chr1_4:71774879-71774898 | Msa0182990:intron | 30.0% | |
| TTAATAGCATTACCAGTATG+AGG | - | chr1_4:71775038-71775057 | Msa0182990:intron | 30.0% | |
| ACATGTTGCAATTAAAACGA+AGG | + | chr1_4:71775099-71775118 | None:intergenic | 30.0% | |
| GACTGAACGAATATGAATAG+AGG | + | chr1_4:71768124-71768143 | None:intergenic | 35.0% | |
| TTCCCAATTCCTAATTCCAA+TGG | - | chr1_4:71768155-71768174 | Msa0182990:three_prime_UTR | 35.0% | |
| CTCCATTGGAATTAGGAATT+GGG | + | chr1_4:71768160-71768179 | None:intergenic | 35.0% | |
| TCTCCATTGGAATTAGGAAT+TGG | + | chr1_4:71768161-71768180 | None:intergenic | 35.0% | |
| AATGTTCTTCTTCTTCTTCG+CGG | + | chr1_4:71768263-71768282 | None:intergenic | 35.0% | |
| CCCTATATTAGTCATGAGTT+AGG | - | chr1_4:71768656-71768675 | Msa0182990:intron | 35.0% | |
| CCCTAACTCATGACTAATAT+AGG | + | chr1_4:71768660-71768679 | None:intergenic | 35.0% | |
| TCAAACTTACATAGTTCCCT+TGG | + | chr1_4:71768938-71768957 | None:intergenic | 35.0% | |
| GATGCTGAGAATGAAAGTTA+TGG | - | chr1_4:71768956-71768975 | Msa0182990:intron | 35.0% | |
| ! | CAATGATGGGATTATTCTCA+CGG | + | chr1_4:71769247-71769266 | None:intergenic | 35.0% |
| TCATCACTTGAAAACAACTC+CGG | + | chr1_4:71769278-71769297 | None:intergenic | 35.0% | |
| ! | CTTTGCTGTGAGTGTAAATT+CGG | - | chr1_4:71769387-71769406 | Msa0182990:intron | 35.0% |
| ATTTACACTCCCATGCAATT+TGG | - | chr1_4:71769584-71769603 | Msa0182990:intron | 35.0% | |
| ! | GTTTCGTTTTCCAAATTGCA+TGG | + | chr1_4:71769597-71769616 | None:intergenic | 35.0% |
| !! | TGAGTAACGGGTATATTTCA+TGG | - | chr1_4:71769677-71769696 | Msa0182990:intron | 35.0% |
| CTTGTATTTATCAAGTGCAG+TGG | + | chr1_4:71769838-71769857 | None:intergenic | 35.0% | |
| ! | GTTAAACGCTTTTGAACACT+TGG | - | chr1_4:71769910-71769929 | Msa0182990:intron | 35.0% |
| TTTGAACACTTGGGTAAACA+CGG | - | chr1_4:71769920-71769939 | Msa0182990:intron | 35.0% | |
| TAAAAGCTGCGTATCTAAAC+AGG | + | chr1_4:71769994-71770013 | None:intergenic | 35.0% | |
| ATGTTTGAGCGCATTTAATC+AGG | + | chr1_4:71770298-71770317 | None:intergenic | 35.0% | |
| ACAATCTATGAACAGTGCAA+AGG | - | chr1_4:71770380-71770399 | Msa0182990:CDS | 35.0% | |
| AATATTGGAAAGCGAAGAAG+AGG | + | chr1_4:71770415-71770434 | None:intergenic | 35.0% | |
| CTTCAAGCTTGCCTAAATAT+TGG | + | chr1_4:71770430-71770449 | None:intergenic | 35.0% | |
| CAATATTTAGGCAAGCTTGA+AGG | - | chr1_4:71770428-71770447 | Msa0182990:CDS | 35.0% | |
| ! | CATGCCTGTAAACATTGATT+CGG | - | chr1_4:71770467-71770486 | Msa0182990:intron | 35.0% |
| ATGACCGAATCAATGTTTAC+AGG | + | chr1_4:71770474-71770493 | None:intergenic | 35.0% | |
| !! | AACATTGATTCGGTCATTTG+GGG | - | chr1_4:71770477-71770496 | Msa0182990:intron | 35.0% |
| TACATATTGTAACTGGCAAC+CGG | + | chr1_4:71770574-71770593 | None:intergenic | 35.0% | |
| AACATATTGTAACTGGCAAC+CGG | + | chr1_4:71770609-71770628 | None:intergenic | 35.0% | |
| TGATTCCTGTGTTGTATTTG+AGG | - | chr1_4:71770713-71770732 | Msa0182990:intron | 35.0% | |
| AACATCCTCAAATACAACAC+AGG | + | chr1_4:71770721-71770740 | None:intergenic | 35.0% | |
| CCGTGATTGGAAAAATCTAA+TGG | - | chr1_4:71770766-71770785 | Msa0182990:intron | 35.0% | |
| ATCTTCTTGACCTTCATAAG+GGG | + | chr1_4:71770829-71770848 | None:intergenic | 35.0% | |
| GACCTCAAAATTATTATGGC+AGG | - | chr1_4:71770957-71770976 | Msa0182990:intron | 35.0% | |
| !!! | TGTAATTTTTTTCGTAGGCC+AGG | + | chr1_4:71771209-71771228 | None:intergenic | 35.0% |
| CAAAAAAAACGGCCTATGAT+TGG | + | chr1_4:71771252-71771271 | None:intergenic | 35.0% | |
| !!! | CAATCATAGGCCGTTTTTTT+TGG | - | chr1_4:71771250-71771269 | Msa0182990:intron | 35.0% |
| AGGCCATCAAATAGTTCATT+TGG | - | chr1_4:71771339-71771358 | Msa0182990:intron | 35.0% | |
| AGGCCAAATGAACTATTTGA+TGG | + | chr1_4:71771345-71771364 | None:intergenic | 35.0% | |
| GTTCATTTGGCCTACTAAAT+AGG | - | chr1_4:71771352-71771371 | Msa0182990:intron | 35.0% | |
| !! | AGGCTTTTAAGTAGGCTTTA+AGG | + | chr1_4:71771387-71771406 | None:intergenic | 35.0% |
| ! | TTTCTAAAAAGCCTAAGCCT+AGG | - | chr1_4:71771632-71771651 | Msa0182990:intron | 35.0% |
| TCAAAATGCCAAGAGAATAG+AGG | - | chr1_4:71771771-71771790 | Msa0182990:intron | 35.0% | |
| ! | TGCCAGGTTGAAAAAAAATG+AGG | - | chr1_4:71771829-71771848 | Msa0182990:intron | 35.0% |
| !!! | GTCCTCATTTTTTTTCAACC+TGG | + | chr1_4:71771834-71771853 | None:intergenic | 35.0% |
| AATTGAAAAAGGAGTAGGGA+AGG | - | chr1_4:71771950-71771969 | Msa0182990:intron | 35.0% | |
| ATTGAAAAAGGAGTAGGGAA+GGG | - | chr1_4:71771951-71771970 | Msa0182990:intron | 35.0% | |
| AGTATCCTACATCTGCTATA+AGG | + | chr1_4:71772044-71772063 | None:intergenic | 35.0% | |
| TATAGCAGATGTAGGATACT+AGG | - | chr1_4:71772044-71772063 | Msa0182990:intron | 35.0% | |
| ! | ATCTGTGCTGTTGATTAATC+TGG | - | chr1_4:71772348-71772367 | Msa0182990:intron | 35.0% |
| TTATTGTGACCTAATTCTGC+AGG | - | chr1_4:71772697-71772716 | Msa0182990:intron | 35.0% | |
| !! | ATTTTAGGAACTATTGGCAC+TGG | - | chr1_4:71772833-71772852 | Msa0182990:intron | 35.0% |
| !! | TTTTAGGAACTATTGGCACT+GGG | - | chr1_4:71772834-71772853 | Msa0182990:intron | 35.0% |
| ATAGTTGACTGAAGGTAAAC+AGG | + | chr1_4:71772907-71772926 | None:intergenic | 35.0% | |
| ACCTTCAGTCAACTATAAGA+CGG | - | chr1_4:71772911-71772930 | Msa0182990:intron | 35.0% | |
| TGATCACAGCTGAATATAGA+AGG | + | chr1_4:71772981-71773000 | None:intergenic | 35.0% | |
| CTAACATGGACACAAAAATC+AGG | + | chr1_4:71773024-71773043 | None:intergenic | 35.0% | |
| ! | CTGATTTTTGTGTCCATGTT+AGG | - | chr1_4:71773022-71773041 | Msa0182990:intron | 35.0% |
| GCTAAATGTAAATGATTGGG+AGG | + | chr1_4:71773189-71773208 | None:intergenic | 35.0% | |
| !!! | TCCTAGTGTAAGTTTTGAGT+CGG | - | chr1_4:71773234-71773253 | Msa0182990:intron | 35.0% |
| ! | GCAGATAAGCTTGTTTAGAA+AGG | + | chr1_4:71773270-71773289 | None:intergenic | 35.0% |
| TAAACAAGCTTATCTGCATC+TGG | - | chr1_4:71773273-71773292 | Msa0182990:intron | 35.0% | |
| AAAATGCCTTGAGTAGAACT+TGG | - | chr1_4:71773383-71773402 | Msa0182990:intron | 35.0% | |
| GGACAGAAAATGATATACAG+TGG | + | chr1_4:71773412-71773431 | None:intergenic | 35.0% | |
| !! | GAAAGCGAAAGGTATTAAGT+AGG | + | chr1_4:71773433-71773452 | None:intergenic | 35.0% |
| TATCAATCTGATGCTTCTCA+AGG | - | chr1_4:71773498-71773517 | Msa0182990:intron | 35.0% | |
| TTGAGTGACAAGGATTTCAT+GGG | + | chr1_4:71773660-71773679 | None:intergenic | 35.0% | |
| TTTGAGTGACAAGGATTTCA+TGG | + | chr1_4:71773661-71773680 | None:intergenic | 35.0% | |
| TGATAAAGGTTTGAGTGACA+AGG | + | chr1_4:71773670-71773689 | None:intergenic | 35.0% | |
| TGATATTGTTTGGGCAGAAA+GGG | + | chr1_4:71773735-71773754 | None:intergenic | 35.0% | |
| ATGATATTGTTTGGGCAGAA+AGG | + | chr1_4:71773736-71773755 | None:intergenic | 35.0% | |
| ACATACACTAACAGTTCTCT+CGG | - | chr1_4:71773880-71773899 | Msa0182990:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr1_4:71774102-71774121 | Msa0182990:intron | 35.0% | |
| ! | GTTTCTCGAATGGTTTTCTT+AGG | + | chr1_4:71774157-71774176 | None:intergenic | 35.0% |
| !! | TAGAGTAGCTTTAACTTTGG+AGG | - | chr1_4:71774296-71774315 | Msa0182990:CDS | 35.0% |
| !! | AGAGTAGCTTTAACTTTGGA+GGG | - | chr1_4:71774297-71774316 | Msa0182990:CDS | 35.0% |
| ! | GACCCCTTATAATTTTCTGT+TGG | + | chr1_4:71774516-71774535 | None:intergenic | 35.0% |
| !! | TTTTTCTGTTGGTTGAGATG+GGG | + | chr1_4:71774620-71774639 | None:intergenic | 35.0% |
| !!! | GTTTTTTCTGTTGGTTGAGA+TGG | + | chr1_4:71774622-71774641 | None:intergenic | 35.0% |
| ACCAACAGAAAAAACAAGTC+AGG | - | chr1_4:71774627-71774646 | Msa0182990:intron | 35.0% | |
| !!! | ACCTGACTTGTTTTTTCTGT+TGG | + | chr1_4:71774631-71774650 | None:intergenic | 35.0% |
| GATTGTTGAGTTATTTGCAC+TGG | - | chr1_4:71774857-71774876 | Msa0182990:intron | 35.0% | |
| TGATTATTGGGAATGTGACA+TGG | - | chr1_4:71775297-71775316 | Msa0182990:CDS | 35.0% | |
| GATTATTGGGAATGTGACAT+GGG | - | chr1_4:71775298-71775317 | Msa0182990:CDS | 35.0% | |
| TGTCGTTCTCCATTGGAATT+AGG | + | chr1_4:71768167-71768186 | None:intergenic | 40.0% | |
| AGAAAACGATGAACACGAAG+CGG | - | chr1_4:71768323-71768342 | Msa0182990:three_prime_UTR | 40.0% | |
| !! | TTAGTGAAAGGAGTTCTGGA+AGG | + | chr1_4:71768387-71768406 | None:intergenic | 40.0% |
| GAGATTAGTGAAAGGAGTTC+TGG | + | chr1_4:71768391-71768410 | None:intergenic | 40.0% | |
| ACTTGGCTGAGATTAGTGAA+AGG | + | chr1_4:71768399-71768418 | None:intergenic | 40.0% | |
| AGGAGAGCAAGTGATAATTG+AGG | - | chr1_4:71768826-71768845 | Msa0182990:intron | 40.0% | |
| GGAGAGCAAGTGATAATTGA+GGG | - | chr1_4:71768827-71768846 | Msa0182990:intron | 40.0% | |
| ATGGAAGCGATTATGGAAGT+TGG | - | chr1_4:71769057-71769076 | Msa0182990:intron | 40.0% | |
| TGGAAGCGATTATGGAAGTT+GGG | - | chr1_4:71769058-71769077 | Msa0182990:intron | 40.0% | |
| TGATGAAGACGATGACAATG+AGG | - | chr1_4:71769160-71769179 | Msa0182990:intron | 40.0% | |
| TCCCATCATTGAATATGACC+CGG | - | chr1_4:71769256-71769275 | Msa0182990:intron | 40.0% | |
| TCCGGGTCATATTCAATGAT+GGG | + | chr1_4:71769260-71769279 | None:intergenic | 40.0% | |
| CATCACTTGAAAACAACTCC+GGG | + | chr1_4:71769277-71769296 | None:intergenic | 40.0% | |
| CTTTGGCTGTAGACATAATG+TGG | - | chr1_4:71769735-71769754 | Msa0182990:intron | 40.0% | |
| TTGAACACTTGGGTAAACAC+GGG | - | chr1_4:71769921-71769940 | Msa0182990:intron | 40.0% | |
| ! | AAAGCCTTTTACTTGCCAAC+CGG | - | chr1_4:71769963-71769982 | Msa0182990:intron | 40.0% |
| AGTAGGAGATTTAACAGCGA+AGG | + | chr1_4:71770111-71770130 | None:intergenic | 40.0% | |
| TGTGGTAGTTGTGTTTGAGT+AGG | + | chr1_4:71770128-71770147 | None:intergenic | 40.0% | |
| TGAGCGCATTTAATCAGGTT+GGG | + | chr1_4:71770293-71770312 | None:intergenic | 40.0% | |
| TTGAGCGCATTTAATCAGGT+TGG | + | chr1_4:71770294-71770313 | None:intergenic | 40.0% | |
| TATTTAGGCAAGCTTGAAGG+TGG | - | chr1_4:71770431-71770450 | Msa0182990:CDS | 40.0% | |
| ATCAATGTTTACAGGCATGG+CGG | + | chr1_4:71770466-71770485 | None:intergenic | 40.0% | |
| CGAATCAATGTTTACAGGCA+TGG | + | chr1_4:71770469-71770488 | None:intergenic | 40.0% | |
| TCTTTCATAGTGATCCATCC+TGG | - | chr1_4:71770915-71770934 | Msa0182990:intron | 40.0% | |
| ! | TCTACTTTGTGCTGTTATCC+AGG | + | chr1_4:71770936-71770955 | None:intergenic | 40.0% |
| ATTACGTTTAAGCCTCTGAG+TGG | - | chr1_4:71771118-71771137 | Msa0182990:intron | 40.0% | |
| AAAAATTACAAGCCTGAGCC+TGG | - | chr1_4:71771219-71771238 | Msa0182990:intron | 40.0% | |
| GCCTACTAAATAGGCTAAAC+AGG | - | chr1_4:71771361-71771380 | Msa0182990:intron | 40.0% | |
| GCCTGTTTAGCCTATTTAGT+AGG | + | chr1_4:71771365-71771384 | None:intergenic | 40.0% | |
| TATTAATAGGCCGGCCTATT+AGG | - | chr1_4:71771558-71771577 | Msa0182990:intron | 40.0% | |
| TAGTTAAATAGGCCAGGCTT+AGG | + | chr1_4:71771605-71771624 | None:intergenic | 40.0% | |
| CCTGTTTAGTTAAATAGGCC+AGG | + | chr1_4:71771611-71771630 | None:intergenic | 40.0% | |
| CCTGGCCTATTTAACTAAAC+AGG | - | chr1_4:71771608-71771627 | Msa0182990:intron | 40.0% | |
| TGACTATGCCTCTATTCTCT+TGG | + | chr1_4:71771782-71771801 | None:intergenic | 40.0% | |
| AAGTCGTCTTAGTGGGAAAA+GGG | + | chr1_4:71771923-71771942 | None:intergenic | 40.0% | |
| AAAGTCGTCTTAGTGGGAAA+AGG | + | chr1_4:71771924-71771943 | None:intergenic | 40.0% | |
| TCCAAGAAAGTCGTCTTAGT+GGG | + | chr1_4:71771930-71771949 | None:intergenic | 40.0% | |
| TTCCAAGAAAGTCGTCTTAG+TGG | + | chr1_4:71771931-71771950 | None:intergenic | 40.0% | |
| CAATCAACATACCAGAGTAG+TGG | - | chr1_4:71771983-71772002 | Msa0182990:intron | 40.0% | |
| TCCAACCTTATAGCAGATGT+AGG | - | chr1_4:71772036-71772055 | Msa0182990:intron | 40.0% | |
| TCCTACATCTGCTATAAGGT+TGG | + | chr1_4:71772040-71772059 | None:intergenic | 40.0% | |
| CAGATGTAGGATACTAGGAT+AGG | - | chr1_4:71772049-71772068 | Msa0182990:intron | 40.0% | |
| GCTCTAGTAACATACATGTG+CGG | - | chr1_4:71772071-71772090 | Msa0182990:intron | 40.0% | |
| CTCTAGTAACATACATGTGC+GGG | - | chr1_4:71772072-71772091 | Msa0182990:intron | 40.0% | |
| TCCAGATGAACTTTCGTATG+AGG | - | chr1_4:71772739-71772758 | Msa0182990:intron | 40.0% | |
| ACCTCATACGAAAGTTCATC+TGG | + | chr1_4:71772743-71772762 | None:intergenic | 40.0% | |
| CCTTCAGTCAACTATAAGAC+GGG | - | chr1_4:71772912-71772931 | Msa0182990:intron | 40.0% | |
| CTTCAGTCAACTATAAGACG+GGG | - | chr1_4:71772913-71772932 | Msa0182990:intron | 40.0% | |
| !! | ATGTTAGGTGTGTCATTTGC+CGG | - | chr1_4:71773037-71773056 | Msa0182990:intron | 40.0% |
| AACCAGTTGTTAATGCACTC+GGG | + | chr1_4:71773120-71773139 | None:intergenic | 40.0% | |
| CAACCAGTTGTTAATGCACT+CGG | + | chr1_4:71773121-71773140 | None:intergenic | 40.0% | |
| ! | ACCGACTCAAAACTTACACT+AGG | + | chr1_4:71773238-71773257 | None:intergenic | 40.0% |
| CTTGTTTAGAAAGGACCCAA+CGG | + | chr1_4:71773261-71773280 | None:intergenic | 40.0% | |
| TGGAATCCAAGTTCTACTCA+AGG | + | chr1_4:71773392-71773411 | None:intergenic | 40.0% | |
| !! | TCTCAAGGCTTTAGTTTGCT+AGG | - | chr1_4:71773513-71773532 | Msa0182990:intron | 40.0% |
| TAGGAACTGAGGAGTGATAA+AGG | + | chr1_4:71773684-71773703 | None:intergenic | 40.0% | |
| ATTTATGCGCTGAGCACTTA+AGG | - | chr1_4:71774048-71774067 | Msa0182990:intron | 40.0% | |
| TTTATGCGCTGAGCACTTAA+GGG | - | chr1_4:71774049-71774068 | Msa0182990:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr1_4:71774127-71774146 | Msa0182990:CDS | 40.0% | |
| AGATTTAGAGGTCAGTGAGT+TGG | - | chr1_4:71774186-71774205 | Msa0182990:CDS | 40.0% | |
| ! | CAGTGAGTTGGATCCAAATA+TGG | - | chr1_4:71774198-71774217 | Msa0182990:CDS | 40.0% |
| AGGATCACTAGTCCAGAAAA+TGG | - | chr1_4:71774404-71774423 | Msa0182990:CDS | 40.0% | |
| GGATCACTAGTCCAGAAAAT+GGG | - | chr1_4:71774405-71774424 | Msa0182990:CDS | 40.0% | |
| CAAAAGGGATTCTACAAAGG+AGG | + | chr1_4:71774562-71774581 | None:intergenic | 40.0% | |
| ! | CTCCTTTGTAGAATCCCTTT+TGG | - | chr1_4:71774560-71774579 | Msa0182990:intron | 40.0% |
| AGAAAAAACAAGTCAGGTGC+AGG | - | chr1_4:71774633-71774652 | Msa0182990:intron | 40.0% | |
| CATCGATACTTCAGTAGAAG+TGG | + | chr1_4:71774660-71774679 | None:intergenic | 40.0% | |
| AAAACGTCTTCTGAACGATG+TGG | + | chr1_4:71774689-71774708 | None:intergenic | 40.0% | |
| CTCAACAATCTCTTCAAGAC+AGG | + | chr1_4:71774847-71774866 | None:intergenic | 40.0% | |
| ATACCTCTGTACTGCAAACA+GGG | + | chr1_4:71774924-71774943 | None:intergenic | 40.0% | |
| TGGAATGACTGGCATTATAG+TGG | - | chr1_4:71775157-71775176 | Msa0182990:CDS | 40.0% | |
| ATTATAGTGGTCAGGTATGG+CGG | - | chr1_4:71775170-71775189 | Msa0182990:CDS | 40.0% | |
| GGGAGGAATCAGACTAATTA+TGG | - | chr1_4:71775191-71775210 | Msa0182990:CDS | 40.0% | |
| TTCTTCGCGGATGTGATTGT+TGG | + | chr1_4:71768250-71768269 | None:intergenic | 45.0% | |
| GAAGCGGAACAACAACAAAC+TGG | - | chr1_4:71768339-71768358 | Msa0182990:three_prime_UTR | 45.0% | |
| TCTGGAAGGTTGTTGAGCAT+TGG | + | chr1_4:71768373-71768392 | None:intergenic | 45.0% | |
| AAGCGATTATGGAAGTTGGG+AGG | - | chr1_4:71769061-71769080 | Msa0182990:intron | 45.0% | |
| AGCGATTATGGAAGTTGGGA+GGG | - | chr1_4:71769062-71769081 | Msa0182990:intron | 45.0% | |
| ATTATGGAAGTTGGGAGGGT+GGG | - | chr1_4:71769066-71769085 | Msa0182990:intron | 45.0% | |
| TGAAGACGATGACAATGAGG+AGG | - | chr1_4:71769163-71769182 | Msa0182990:intron | 45.0% | |
| GTCCATGATCATGCTAGTGT+TGG | - | chr1_4:71769218-71769237 | Msa0182990:intron | 45.0% | |
| CTCCAACACTAGCATGATCA+TGG | + | chr1_4:71769223-71769242 | None:intergenic | 45.0% | |
| CTCCGGGTCATATTCAATGA+TGG | + | chr1_4:71769261-71769280 | None:intergenic | 45.0% | |
| TGCTGTGAGTGTAAATTCGG+TGG | - | chr1_4:71769390-71769409 | Msa0182990:intron | 45.0% | |
| TTCAATTACAGAGGACGCTG+AGG | - | chr1_4:71769464-71769483 | Msa0182990:intron | 45.0% | |
| ATAGCCGGTTGGCAAGTAAA+AGG | + | chr1_4:71769970-71769989 | None:intergenic | 45.0% | |
| CGTATCTAAACAGGCATAGC+CGG | + | chr1_4:71769985-71770004 | None:intergenic | 45.0% | |
| !! | GTGTGCTTGGTTTGTTCATG+TGG | + | chr1_4:71770146-71770165 | None:intergenic | 45.0% |
| ACAAACCAAGCACACAATGC+TGG | - | chr1_4:71770151-71770170 | Msa0182990:intron | 45.0% | |
| AAGAACCAGCATTGTGTGCT+TGG | + | chr1_4:71770159-71770178 | None:intergenic | 45.0% | |
| GTGTTGAAGCACAGAACACA+CGG | + | chr1_4:71770331-71770350 | None:intergenic | 45.0% | |
| ATTGGAAAGCGAAGAAGAGG+AGG | + | chr1_4:71770412-71770431 | None:intergenic | 45.0% | |
| ATTGCTGAGCATGAGTCACT+AGG | - | chr1_4:71770875-71770894 | Msa0182990:intron | 45.0% | |
| TTGCTGAGCATGAGTCACTA+GGG | - | chr1_4:71770876-71770895 | Msa0182990:intron | 45.0% | |
| ! | CTTTGTGCTGTTATCCAGGA+TGG | + | chr1_4:71770932-71770951 | None:intergenic | 45.0% |
| TATGGCAGGATAGCAGATAG+TGG | - | chr1_4:71770971-71770990 | Msa0182990:intron | 45.0% | |
| CTATGACATCATCCACTCAG+AGG | + | chr1_4:71771133-71771152 | None:intergenic | 45.0% | |
| TGAGTGGATGATGTCATAGC+TGG | - | chr1_4:71771134-71771153 | Msa0182990:intron | 45.0% | |
| GGCTAAGGCATATCAAAGTC+TGG | + | chr1_4:71771188-71771207 | None:intergenic | 45.0% | |
| GACTTTGATATGCCTTAGCC+TGG | - | chr1_4:71771188-71771207 | Msa0182990:intron | 45.0% | |
| !!! | TTTTTTCGTAGGCCAGGCTA+AGG | + | chr1_4:71771203-71771222 | None:intergenic | 45.0% |
| !!! | ATAGGCCGTTTTTTTTGGCC+TGG | - | chr1_4:71771255-71771274 | Msa0182990:intron | 45.0% |
| ! | TCCAGGCTTTTAAATAGGCC+AGG | + | chr1_4:71771281-71771300 | None:intergenic | 45.0% |
| GCCTATTTAAAAGCCTGGAC+TGG | - | chr1_4:71771282-71771301 | Msa0182990:intron | 45.0% | |
| ! | GCCAGTCCAGGCTTTTAAAT+AGG | + | chr1_4:71771286-71771305 | None:intergenic | 45.0% |
| TGTGAAGTAGGCCTGTAAGT+AGG | + | chr1_4:71771316-71771335 | None:intergenic | 45.0% | |
| TACAGGCCTACTTCACATTG+AGG | - | chr1_4:71771319-71771338 | Msa0182990:intron | 45.0% | |
| TGATGGCCTCAATGTGAAGT+AGG | + | chr1_4:71771328-71771347 | None:intergenic | 45.0% | |
| GCCTATTAAGCCTAATAGGC+CGG | + | chr1_4:71771571-71771590 | None:intergenic | 45.0% | |
| !! | CTTTTCTAGAAGCCTAAGCC+TGG | - | chr1_4:71771590-71771609 | Msa0182990:intron | 45.0% |
| TAGTAGATAGGCCTAGGCTT+AGG | + | chr1_4:71771646-71771665 | None:intergenic | 45.0% | |
| CCTGTTTAGTAGATAGGCCT+AGG | + | chr1_4:71771652-71771671 | None:intergenic | 45.0% | |
| CCTAGGCCTATCTACTAAAC+AGG | - | chr1_4:71771649-71771668 | Msa0182990:intron | 45.0% | |
| TCCCACTAAGACGACTTTCT+TGG | - | chr1_4:71771926-71771945 | Msa0182990:intron | 45.0% | |
| !!! | ACCACCTGAGCTTGTTTTTG+GGG | + | chr1_4:71772159-71772178 | None:intergenic | 45.0% |
| !! | CACCACCTGAGCTTGTTTTT+GGG | + | chr1_4:71772160-71772179 | None:intergenic | 45.0% |
| !! | TCACCACCTGAGCTTGTTTT+TGG | + | chr1_4:71772161-71772180 | None:intergenic | 45.0% |
| AAAAACAAGCTCAGGTGGTG+AGG | - | chr1_4:71772160-71772179 | Msa0182990:intron | 45.0% | |
| TAGTGCTTCTGTTGCAGCAT+GGG | + | chr1_4:71772328-71772347 | None:intergenic | 45.0% | |
| TTAGTGCTTCTGTTGCAGCA+TGG | + | chr1_4:71772329-71772348 | None:intergenic | 45.0% | |
| GTGTTTGACACGTGTCTGTA+GGG | + | chr1_4:71772376-71772395 | None:intergenic | 45.0% | |
| ACCTAATTCTGCAGGATGCT+TGG | - | chr1_4:71772705-71772724 | Msa0182990:intron | 45.0% | |
| CCTAATTCTGCAGGATGCTT+GGG | - | chr1_4:71772706-71772725 | Msa0182990:intron | 45.0% | |
| CCCGTCTTATAGTTGACTGA+AGG | + | chr1_4:71772915-71772934 | None:intergenic | 45.0% | |
| GGCAAATGACACACCTAACA+TGG | + | chr1_4:71773038-71773057 | None:intergenic | 45.0% | |
| !! | TGTTAGGTGTGTCATTTGCC+GGG | - | chr1_4:71773038-71773057 | Msa0182990:intron | 45.0% |
| CATCATCCTCATAGTCTACC+CGG | + | chr1_4:71773059-71773078 | None:intergenic | 45.0% | |
| AGTTGTTAATGCACTCGGGA+TGG | + | chr1_4:71773116-71773135 | None:intergenic | 45.0% | |
| ATCCCGAGTGCATTAACAAC+TGG | - | chr1_4:71773115-71773134 | Msa0182990:intron | 45.0% | |
| !!! | TAAGTTTTGAGTCGGTCCGT+TGG | - | chr1_4:71773242-71773261 | Msa0182990:intron | 45.0% |
| !!! | AAGTTTTGAGTCGGTCCGTT+GGG | - | chr1_4:71773243-71773262 | Msa0182990:intron | 45.0% |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr1_4:71774111-71774130 | Msa0182990:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr1_4:71774121-71774140 | Msa0182990:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_4:71774253-71774272 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_4:71774254-71774273 | None:intergenic | 45.0% |
| GGCCAAAAGGGATTCTACAA+AGG | + | chr1_4:71774565-71774584 | None:intergenic | 45.0% | |
| GATACCTCTGTACTGCAAAC+AGG | + | chr1_4:71774925-71774944 | None:intergenic | 45.0% | |
| !! | AGTACAGAGGTATCTGCTTC+TGG | - | chr1_4:71774931-71774950 | Msa0182990:intron | 45.0% |
| !! | GTACAGAGGTATCTGCTTCT+GGG | - | chr1_4:71774932-71774951 | Msa0182990:intron | 45.0% |
| CAGAGACTATCTCCTCATAC+TGG | + | chr1_4:71775053-71775072 | None:intergenic | 45.0% | |
| TGACTGGCATTATAGTGGTC+AGG | - | chr1_4:71775162-71775181 | Msa0182990:CDS | 45.0% | |
| GGCATTATAGTGGTCAGGTA+TGG | - | chr1_4:71775167-71775186 | Msa0182990:CDS | 45.0% | |
| TTATAGTGGTCAGGTATGGC+GGG | - | chr1_4:71775171-71775190 | Msa0182990:CDS | 45.0% | |
| !!! | TTTTATTATTACTATTAATA+CGG | + | chr1_4:71772480-71772499 | None:intergenic | 5.0% |
| !!! | TATAATTTTATTTACATTTA+AGG | + | chr1_4:71774586-71774605 | None:intergenic | 5.0% |
| GATGGGAACCTGCTCTTGAA+GGG | + | chr1_4:71768448-71768467 | None:intergenic | 50.0% | |
| AGATGGGAACCTGCTCTTGA+AGG | + | chr1_4:71768449-71768468 | None:intergenic | 50.0% | |
| GATTATGGAAGTTGGGAGGG+TGG | - | chr1_4:71769065-71769084 | Msa0182990:intron | 50.0% | |
| GGGAGCTATTTGCATGACGA+TGG | - | chr1_4:71769086-71769105 | Msa0182990:intron | 50.0% | |
| !! | AGCCTATGCAAGAGCATTGC+AGG | - | chr1_4:71769298-71769317 | Msa0182990:intron | 50.0% |
| CTCCTGCAATGCTCTTGCAT+AGG | + | chr1_4:71769303-71769322 | None:intergenic | 50.0% | |
| !! | CTATGCAAGAGCATTGCAGG+AGG | - | chr1_4:71769301-71769320 | Msa0182990:intron | 50.0% |
| ATTGCAGGAGGCTGAAGAGA+GGG | - | chr1_4:71769313-71769332 | Msa0182990:intron | 50.0% | |
| CTAGACTGCTTGCTCTTGCT+GGG | - | chr1_4:71769345-71769364 | Msa0182990:intron | 50.0% | |
| TCTAAACAGGCATAGCCGGT+TGG | + | chr1_4:71769981-71770000 | None:intergenic | 50.0% | |
| TTAGGCAAGCTTGAAGGTGG+TGG | - | chr1_4:71770434-71770453 | Msa0182990:CDS | 50.0% | |
| GTGGATGATGTCATAGCTGG+AGG | - | chr1_4:71771137-71771156 | Msa0182990:intron | 50.0% | |
| GATGATGTCATAGCTGGAGG+CGG | - | chr1_4:71771140-71771159 | Msa0182990:intron | 50.0% | |
| ATGATGTCATAGCTGGAGGC+GGG | - | chr1_4:71771141-71771160 | Msa0182990:intron | 50.0% | |
| TATCAAAGTCTGGCCTGGAC+TGG | + | chr1_4:71771178-71771197 | None:intergenic | 50.0% | |
| AGGCATATCAAAGTCTGGCC+TGG | + | chr1_4:71771183-71771202 | None:intergenic | 50.0% | |
| ! | AACGGCCTATGATTGGCCAT+AGG | + | chr1_4:71771245-71771264 | None:intergenic | 50.0% |
| CCAGGCCAGGCCAAAAAAAA+CGG | + | chr1_4:71771263-71771282 | None:intergenic | 50.0% | |
| ! | GCTTTTAAATAGGCCAGGCC+AGG | + | chr1_4:71771276-71771295 | None:intergenic | 50.0% |
| GCCTGGCCTATTTAAAAGCC+TGG | - | chr1_4:71771277-71771296 | Msa0182990:intron | 50.0% | |
| TGGCCTGAAAGCCTACTTAC+AGG | - | chr1_4:71771302-71771321 | Msa0182990:intron | 50.0% | |
| AGGCCTGTAAGTAGGCTTTC+AGG | + | chr1_4:71771308-71771327 | None:intergenic | 50.0% | |
| GCCGGCCTATTAGGCTTAAT+AGG | - | chr1_4:71771567-71771586 | Msa0182990:intron | 50.0% | |
| GCCTATCTACTAAACAGGCC+AGG | - | chr1_4:71771654-71771673 | Msa0182990:intron | 50.0% | |
| GCCTGGCCTGTTTAGTAGAT+AGG | + | chr1_4:71771658-71771677 | None:intergenic | 50.0% | |
| TAAACAGGCCAGGCCAAAAC+AGG | - | chr1_4:71771664-71771683 | Msa0182990:intron | 50.0% | |
| CTGGCAAGCCTCTATTCTCT+TGG | + | chr1_4:71771815-71771834 | None:intergenic | 50.0% | |
| CAAGAGAATAGAGGCTTGCC+AGG | - | chr1_4:71771813-71771832 | Msa0182990:intron | 50.0% | |
| AATAGAGATAGAGAGCCGCG+CGG | - | chr1_4:71771896-71771915 | Msa0182990:intron | 50.0% | |
| CTCACACAACACCACTACTC+TGG | + | chr1_4:71771997-71772016 | None:intergenic | 50.0% | |
| GCAACCCCAAAAACAAGCTC+AGG | - | chr1_4:71772152-71772171 | Msa0182990:intron | 50.0% | |
| ACCCCAAAAACAAGCTCAGG+TGG | - | chr1_4:71772155-71772174 | Msa0182990:intron | 50.0% | |
| GGTGTTTGACACGTGTCTGT+AGG | + | chr1_4:71772377-71772396 | None:intergenic | 50.0% | |
| CCCAAGCATCCTGCAGAATT+AGG | + | chr1_4:71772709-71772728 | None:intergenic | 50.0% | |
| AATTCTGCAGGATGCTTGGG+AGG | - | chr1_4:71772709-71772728 | Msa0182990:intron | 50.0% | |
| TTGTGCGTCCTACTCTCTGT+CGG | - | chr1_4:71772789-71772808 | Msa0182990:intron | 50.0% | |
| GACAGAAACCGACAGAGAGT+AGG | + | chr1_4:71772800-71772819 | None:intergenic | 50.0% | |
| GTAGTTGGAACTGAGAGCAG+AGG | - | chr1_4:71772861-71772880 | Msa0182990:intron | 50.0% | |
| AAGACGGGGAGTGATCAACT+TGG | - | chr1_4:71772927-71772946 | Msa0182990:intron | 50.0% | |
| AGACGGGGAGTGATCAACTT+GGG | - | chr1_4:71772928-71772947 | Msa0182990:intron | 50.0% | |
| CATTTGCCGGGTAGACTATG+AGG | - | chr1_4:71773050-71773069 | Msa0182990:intron | 50.0% | |
| TAAATGATTGGGAGGGGCAG+AGG | + | chr1_4:71773181-71773200 | None:intergenic | 50.0% | |
| CTGAGCACTTAAGGGCTAGA+TGG | - | chr1_4:71774057-71774076 | Msa0182990:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | + | chr1_4:71774249-71774268 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGGATA+AGG | - | chr1_4:71774247-71774266 | Msa0182990:CDS | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_4:71774255-71774274 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_4:71774252-71774271 | Msa0182990:CDS | 50.0% | |
| ACACTCGGTTCTTTGTCTGC+AGG | - | chr1_4:71774894-71774913 | Msa0182990:intron | 50.0% | |
| TTGCCCTGTTTGCAGTACAG+AGG | - | chr1_4:71774918-71774937 | Msa0182990:intron | 50.0% | |
| ! | TGCTTCTGGGAGCAACTTGT+AGG | - | chr1_4:71774945-71774964 | Msa0182990:intron | 50.0% |
| ! | GCTTCTGGGAGCAACTTGTA+GGG | - | chr1_4:71774946-71774965 | Msa0182990:intron | 50.0% |
| ! | TACTTTGGCCGTGCCGTTGT+TGG | + | chr1_4:71768199-71768218 | None:intergenic | 55.0% |
| AACAACGGCACGGCCAAAGT+AGG | - | chr1_4:71768198-71768217 | Msa0182990:three_prime_UTR | 55.0% | |
| ACGGCCAAAGTAGGTTCAGG+CGG | - | chr1_4:71768207-71768226 | Msa0182990:three_prime_UTR | 55.0% | |
| TCCTCCGCCTGAACCTACTT+TGG | + | chr1_4:71768214-71768233 | None:intergenic | 55.0% | |
| AAAGTAGGTTCAGGCGGAGG+AGG | - | chr1_4:71768213-71768232 | Msa0182990:three_prime_UTR | 55.0% | |
| CTCTTGAAGGGTTCGAGCGA+GGG | + | chr1_4:71768436-71768455 | None:intergenic | 55.0% | |
| !! | CGGCACTGATGTAGATGACG+AGG | - | chr1_4:71769133-71769152 | Msa0182990:intron | 55.0% |
| CATTGCAGGAGGCTGAAGAG+AGG | - | chr1_4:71769312-71769331 | Msa0182990:intron | 55.0% | |
| GGAGGCTGAAGAGAGGGAAA+TGG | - | chr1_4:71769319-71769338 | Msa0182990:intron | 55.0% | |
| GCTAGACTGCTTGCTCTTGC+TGG | - | chr1_4:71769344-71769363 | Msa0182990:intron | 55.0% | |
| TACAGAGGACGCTGAGGACA+TGG | - | chr1_4:71769470-71769489 | Msa0182990:intron | 55.0% | |
| GGAGCATGCTGCTAACTCTC+AGG | - | chr1_4:71769494-71769513 | Msa0182990:intron | 55.0% | |
| CATTCACGCACGCACACTCA+TGG | - | chr1_4:71769547-71769566 | Msa0182990:intron | 55.0% | |
| TGATGTCATAGCTGGAGGCG+GGG | - | chr1_4:71771142-71771161 | Msa0182990:intron | 55.0% | |
| ! | CCTATGATTGGCCATAGGCC+AGG | + | chr1_4:71771240-71771259 | None:intergenic | 55.0% |
| CCTGGCCTATGGCCAATCAT+AGG | - | chr1_4:71771237-71771256 | Msa0182990:intron | 55.0% | |
| !!! | CCGTTTTTTTTGGCCTGGCC+TGG | - | chr1_4:71771260-71771279 | Msa0182990:intron | 55.0% |
| TGTCAGGGTCGACATCGACA+AGG | + | chr1_4:71772222-71772241 | None:intergenic | 55.0% | |
| TGCTTCTGTTGCAGCATGGG+TGG | + | chr1_4:71772325-71772344 | None:intergenic | 55.0% | |
| ! | GGAACTATTGGCACTGGGTG+AGG | - | chr1_4:71772839-71772858 | Msa0182990:intron | 55.0% |
| ! | TTGGCACTGGGTGAGGTAGT+TGG | - | chr1_4:71772846-71772865 | Msa0182990:intron | 55.0% |
| CGTAGCCAACCCCACTTAGT+GGG | - | chr1_4:71774241-71774260 | Msa0182990:CDS | 55.0% | |
| TGGTTGAGATGGGGTAGCCT+GGG | + | chr1_4:71774611-71774630 | None:intergenic | 55.0% | |
| TTGGTTGAGATGGGGTAGCC+TGG | + | chr1_4:71774612-71774631 | None:intergenic | 55.0% | |
| !! | GCGGTGGTGTCGTTCTCCAT+TGG | + | chr1_4:71768174-71768193 | None:intergenic | 60.0% |
| GACACCACCGCCACCAACAA+CGG | - | chr1_4:71768183-71768202 | Msa0182990:three_prime_UTR | 60.0% | |
| ! | TTTGGCCGTGCCGTTGTTGG+TGG | + | chr1_4:71768196-71768215 | None:intergenic | 60.0% |
| GGCACGGCCAAAGTAGGTTC+AGG | - | chr1_4:71768204-71768223 | Msa0182990:three_prime_UTR | 60.0% | |
| GCCAAAGTAGGTTCAGGCGG+AGG | - | chr1_4:71768210-71768229 | Msa0182990:three_prime_UTR | 60.0% | |
| GCTCTTGAAGGGTTCGAGCG+AGG | + | chr1_4:71768437-71768456 | None:intergenic | 60.0% | |
| CGCTCGAACCCTTCAAGAGC+AGG | - | chr1_4:71768437-71768456 | Msa0182990:three_prime_UTR | 60.0% | |
| AGAGGACGCTGAGGACATGG+AGG | - | chr1_4:71769473-71769492 | Msa0182990:intron | 60.0% | |
| ! | GGCAAGCTTGAAGGTGGTGG+CGG | - | chr1_4:71770437-71770456 | Msa0182990:intron | 60.0% |
| ACAAGCCTGAGCCTGGCCTA+TGG | - | chr1_4:71771226-71771245 | Msa0182990:intron | 60.0% | |
| ATTGGCCATAGGCCAGGCTC+AGG | + | chr1_4:71771234-71771253 | None:intergenic | 60.0% | |
| GTAGGCTTTCAGGCCAGTCC+AGG | + | chr1_4:71771298-71771317 | None:intergenic | 60.0% | |
| CCTCACATCCTCTGCAGGCT+CGG | + | chr1_4:71771712-71771731 | None:intergenic | 60.0% | |
| CGAGCCTGCAGAGGATGTGA+GGG | - | chr1_4:71771710-71771729 | Msa0182990:intron | 60.0% | |
| GAGCCTGCAGAGGATGTGAG+GGG | - | chr1_4:71771711-71771730 | Msa0182990:intron | 60.0% | |
| TAGTGGGAAAAGGGTCCGCG+CGG | + | chr1_4:71771914-71771933 | None:intergenic | 60.0% | |
| GCGTAGCCAACCCCACTTAG+TGG | - | chr1_4:71774240-71774259 | Msa0182990:CDS | 60.0% | |
| ! | TAGTGGTCAGGTATGGCGGG+AGG | - | chr1_4:71775174-71775193 | Msa0182990:CDS | 60.0% |
| CACCGCCACCAACAACGGCA+CGG | - | chr1_4:71768188-71768207 | Msa0182990:three_prime_UTR | 65.0% | |
| GTAGGTTCAGGCGGAGGAGG+AGG | - | chr1_4:71768216-71768235 | Msa0182990:three_prime_UTR | 65.0% | |
| !! | GGGCGAGGTCAGCATCGACT+TGG | + | chr1_4:71768416-71768435 | None:intergenic | 65.0% |
| TGTCATAGCTGGAGGCGGGG+TGG | - | chr1_4:71771145-71771164 | Msa0182990:intron | 65.0% | |
| GTCATAGCTGGAGGCGGGGT+GGG | - | chr1_4:71771146-71771165 | Msa0182990:intron | 65.0% | |
| GGGTGGGAATAGGCCAGTCC+AGG | - | chr1_4:71771162-71771181 | Msa0182990:intron | 65.0% | |
| AGGCCAGGCCAAAACAGGCC+AGG | - | chr1_4:71771669-71771688 | Msa0182990:intron | 65.0% | |
| GCCAAAACAGGCCAGGCCGT+AGG | - | chr1_4:71771676-71771695 | Msa0182990:intron | 65.0% | |
| ! | GCCTACGGCCTGGCCTGTTT+TGG | + | chr1_4:71771680-71771699 | None:intergenic | 65.0% |
| TCTGCAGGCTCGGCCTACAG+GGG | + | chr1_4:71771702-71771721 | None:intergenic | 65.0% | |
| CTCTGCAGGCTCGGCCTACA+GGG | + | chr1_4:71771703-71771722 | None:intergenic | 65.0% | |
| CCGAGCCTGCAGAGGATGTG+AGG | - | chr1_4:71771709-71771728 | Msa0182990:intron | 65.0% | |
| CCTCCCCTCACATCCTCTGC+AGG | + | chr1_4:71771717-71771736 | None:intergenic | 65.0% | |
| CCTGCAGAGGATGTGAGGGG+AGG | - | chr1_4:71771714-71771733 | Msa0182990:intron | 65.0% | |
| !! | CGTGCCGTTGTTGGTGGCGG+TGG | + | chr1_4:71768190-71768209 | None:intergenic | 70.0% |
| ! | GGCCGTGCCGTTGTTGGTGG+CGG | + | chr1_4:71768193-71768212 | None:intergenic | 70.0% |
| GAAGGGTTCGAGCGAGGGCG+AGG | + | chr1_4:71768431-71768450 | None:intergenic | 70.0% | |
| GCTGGAGGCGGGGTGGGAAT+AGG | - | chr1_4:71771152-71771171 | Msa0182990:intron | 70.0% | |
| !!! | CGGCCTGGCCTGTTTTGGCC+TGG | + | chr1_4:71771675-71771694 | None:intergenic | 70.0% |
| GCTCGGCCTACAGGGGCCTA+CGG | + | chr1_4:71771695-71771714 | None:intergenic | 70.0% | |
| CCTCTGCAGGCTCGGCCTAC+AGG | + | chr1_4:71771704-71771723 | None:intergenic | 70.0% | |
| CCTGTAGGCCGAGCCTGCAG+AGG | - | chr1_4:71771701-71771720 | Msa0182990:intron | 70.0% | |
| GCCAGGCCGTAGGCCCCTGT+AGG | - | chr1_4:71771686-71771705 | Msa0182990:intron | 75.0% | |
| GCCTACAGGGGCCTACGGCC+TGG | + | chr1_4:71771690-71771709 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 71768096 | 71775401 | 71768096 | ID=Msa0182990;Name=Msa0182990 |
| chr1_4 | mRNA | 71768096 | 71775401 | 71768096 | ID=Msa0182990-mRNA-1;Parent=Msa0182990;Name=Msa0182990-mRNA-1;_AED=0.05;_eAED=0.05;_QI=78|1|1|1|1|1|7|435|334 |
| chr1_4 | exon | 71768096 | 71768581 | 71768096 | ID=Msa0182990-mRNA-1:exon:24066;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71770345 | 71770453 | 71770345 | ID=Msa0182990-mRNA-1:exon:24065;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71770536 | 71770657 | 71770536 | ID=Msa0182990-mRNA-1:exon:24064;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71770737 | 71770778 | 71770737 | ID=Msa0182990-mRNA-1:exon:24063;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71773982 | 71774022 | 71773982 | ID=Msa0182990-mRNA-1:exon:24062;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71774120 | 71774474 | 71774120 | ID=Msa0182990-mRNA-1:exon:24061;Parent=Msa0182990-mRNA-1 |
| chr1_4 | exon | 71775039 | 71775401 | 71775039 | ID=Msa0182990-mRNA-1:exon:24060;Parent=Msa0182990-mRNA-1 |
| chr1_4 | five_prime_UTR | 71775324 | 71775401 | 71775324 | ID=Msa0182990-mRNA-1:five_prime_utr;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71775039 | 71775323 | 71775039 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71774120 | 71774474 | 71774120 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71773982 | 71774022 | 71773982 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71770737 | 71770778 | 71770737 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71770536 | 71770657 | 71770536 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71770345 | 71770453 | 71770345 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | CDS | 71768531 | 71768581 | 71768531 | ID=Msa0182990-mRNA-1:cds;Parent=Msa0182990-mRNA-1 |
| chr1_4 | three_prime_UTR | 71768096 | 71768530 | 71768096 | ID=Msa0182990-mRNA-1:three_prime_utr;Parent=Msa0182990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
