AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0067580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0067580 MtrunA17_Chr1g0171591 86.387 595 17 4 1 531 1 595 0.0 966
Msa0067580 MtrunA17_Chr1g0174101 78.535 587 71 2 1 532 1 587 0.0 893
Msa0067580 MtrunA17_Chr1g0210274 53.596 584 211 4 8 532 10 592 0.0 626
Msa0067580 MtrunA17_Chr1g0210284 53.448 580 207 5 8 531 10 582 0.0 620
Msa0067580 MtrunA17_Chr1g0210291 53.859 583 202 6 12 532 13 590 0.0 607
Msa0067580 MtrunA17_Chr7g0264861 51.520 592 223 5 4 531 9 600 0.0 582
Msa0067580 MtrunA17_Chr2g0330551 31.664 559 294 6 21 512 4 541 1.98e-90 287
Msa0067580 MtrunA17_Chr5g0442481 32.657 542 290 6 24 509 11 533 2.99e-87 279
Msa0067580 MtrunA17_Chr7g0225191 31.724 580 300 11 24 512 15 589 4.33e-82 267
Msa0067580 MtrunA17_Chr3g0132161 31.193 545 302 9 24 500 15 554 1.49e-80 262
Msa0067580 MtrunA17_Chr4g0037301 31.835 534 293 7 24 500 15 534 1.07e-71 238
Msa0067580 MtrunA17_Chr2g0304561 28.832 548 311 9 25 500 13 553 4.98e-67 226
Msa0067580 MtrunA17_Chr5g0405621 28.237 556 306 11 24 519 13 535 4.11e-66 223
Msa0067580 MtrunA17_Chr4g0064981 28.440 545 296 13 39 500 26 559 4.50e-63 216
Msa0067580 MtrunA17_Chr3g0106801 25.564 532 326 11 21 502 4 515 3.54e-31 126
Msa0067580 MtrunA17_Chr7g0251871 25.000 572 331 15 24 514 7 561 4.76e-26 112
Msa0067580 MtrunA17_Chr2g0333371 29.185 233 123 5 286 500 81 289 3.41e-25 105
Msa0067580 MtrunA17_Chr3g0106821 25.138 362 244 6 22 371 5 351 3.08e-24 104
Msa0067580 MtrunA17_Chr5g0408921 23.993 571 336 17 24 508 7 565 8.66e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0067580 AT2G39210.1 55.018 558 188 4 14 510 11 566 0.0 625
Msa0067580 AT2G28120.1 52.281 570 217 3 9 524 2 570 0.0 588
Msa0067580 AT1G74780.1 34.291 557 278 8 18 510 1 533 1.95e-100 313
Msa0067580 AT2G34350.1 32.413 543 280 8 24 506 7 522 4.07e-88 281
Msa0067580 AT2G34350.2 32.413 543 280 8 24 506 7 522 4.07e-88 281
Msa0067580 AT1G18940.1 32.909 550 275 8 19 506 4 521 1.19e-86 277
Msa0067580 AT5G50630.1 31.818 528 295 9 24 499 16 530 1.39e-85 275
Msa0067580 AT5G50520.1 31.818 528 295 9 24 499 16 530 1.39e-85 275
Msa0067580 AT2G34355.1 31.444 547 290 8 18 506 1 520 3.28e-83 268
Msa0067580 AT5G14120.1 31.579 570 298 12 24 508 16 578 4.75e-81 264
Msa0067580 AT3G01930.2 29.542 589 312 10 11 508 7 583 1.01e-76 253
Msa0067580 AT2G16660.1 31.144 533 295 7 24 500 14 530 1.69e-71 238
Msa0067580 AT4G34950.1 31.359 574 286 14 24 513 16 565 3.09e-71 238
Msa0067580 AT1G80530.1 28.037 535 298 12 38 501 27 545 4.35e-60 208
Msa0067580 AT3G01930.3 30.824 425 242 7 11 392 7 422 2.58e-57 197
Msa0067580 AT2G16660.2 33.245 376 236 5 24 391 14 382 2.91e-52 182
Msa0067580 AT3G01930.1 27.197 478 249 9 122 508 1 470 6.24e-48 173
Msa0067580 AT2G34355.2 29.040 396 204 7 161 506 2 370 1.40e-47 170
Msa0067580 AT3G01630.1 23.303 545 327 13 24 500 23 544 1.69e-25 110
Msa0067580 AT3G01630.2 23.346 544 326 13 24 499 41 561 1.73e-25 110
Msa0067580 AT4G19450.1 23.966 580 336 16 24 516 7 568 7.12e-25 108
Msa0067580 AT1G31470.1 24.638 552 325 16 18 500 34 563 5.36e-22 100
Msa0067580 AT4G19450.2 23.457 405 265 10 24 389 7 405 5.45e-21 95.9
Msa0067580 AT5G45275.1 30.570 193 132 2 24 215 7 198 3.21e-18 88.2
Msa0067580 AT2G30300.1 25.547 274 166 6 25 287 8 254 2.82e-14 75.9

Find 121 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACTGCTGTTAGCCTCTT+TGG 0.157307 1_2:+32588689 Msa0067580:CDS
CTAATGCTGCCATTTGCTTT+AGG 0.212154 1_2:-32588595 None:intergenic
AAGAGAAATCAAATCAGTTT+TGG 0.212226 1_2:+32587160 Msa0067580:CDS
TAATGCTGCCATTTGCTTTA+GGG 0.225798 1_2:-32588594 None:intergenic
GTAAATAACTTGAGTCAAAT+TGG 0.246330 1_2:+32588079 Msa0067580:CDS
CCTAACAGGAAGGTGGTTTA+TGG 0.247342 1_2:+32587076 Msa0067580:CDS
TACATGTCTTTAATCCTTGC+AGG 0.247805 1_2:+32587686 Msa0067580:CDS
ATATTCCATACTGGAGGTTT+AGG 0.248049 1_2:-32587359 None:intergenic
CTTGAGCTTCTTCAAGGACT+TGG 0.257995 1_2:+32587208 Msa0067580:CDS
AGTCAAATTGGATTATCTTT+AGG 0.269385 1_2:+32588091 Msa0067580:CDS
GGTCATACTTGTTAAGTGTT+AGG 0.272102 1_2:+32588543 Msa0067580:CDS
TTGTGTCCCTAATGGCAATT+TGG 0.273307 1_2:+32588140 Msa0067580:CDS
TTGTTAAGTGTTAGGGTTGC+TGG 0.279418 1_2:+32588551 Msa0067580:CDS
TCACTGCTGTTAGCCTCTTT+GGG 0.282953 1_2:+32588690 Msa0067580:CDS
TTGGTTGTTCAGCTCTCTTA+TGG 0.310124 1_2:-32587634 None:intergenic
CACTCTCTTGAGCTTCTTCA+AGG 0.315653 1_2:+32587202 Msa0067580:CDS
TCAATCATATCTGAACTCTT+TGG 0.323733 1_2:+32588467 Msa0067580:CDS
GTTTCTGCTTTGGTGCAAAT+TGG 0.326521 1_2:+32588432 Msa0067580:CDS
CATAAGCAAAATTAAAGATT+TGG 0.327529 1_2:-32587561 None:intergenic
TTTGGAGTCATTTCCGTAGA+AGG 0.334766 1_2:-32587543 None:intergenic
ATTATTGTTGGTTTCTGCTT+TGG 0.335466 1_2:+32588422 Msa0067580:CDS
CTAAAGCAAATGGCAGCATT+AGG 0.335582 1_2:+32588596 Msa0067580:CDS
CATCATGTCAAGGCTGAAAA+TGG 0.337307 1_2:-32588008 None:intergenic
TATTCCATACTGGAGGTTTA+GGG 0.337312 1_2:-32587358 None:intergenic
GTCATACTTGTTAAGTGTTA+GGG 0.342527 1_2:+32588544 Msa0067580:CDS
CCTTGGGTTGTCTTAACAAT+TGG 0.343987 1_2:+32587278 Msa0067580:CDS
TAGAAATAATGAAAATGAAT+TGG 0.345482 1_2:+32588793 Msa0067580:CDS
TTTATGATCATGTCAGTATC+TGG 0.347170 1_2:+32587110 Msa0067580:CDS
GATAGATCCAAATTGCCATT+AGG 0.350724 1_2:-32588147 None:intergenic
CTCTTATGGTGCTTAATAAC+TGG 0.351299 1_2:-32587620 None:intergenic
TTATGGAAGAACAAAGGATT+TGG 0.359352 1_2:+32587822 Msa0067580:CDS
TGGAAGTGAATGCTACAAAT+TGG 0.367640 1_2:+32588655 Msa0067580:CDS
TGGTGAGTCTGTGGCTTAGA+AGG 0.373922 1_2:-32587881 None:intergenic
TCCATAATAACAACAACAAA+AGG 0.377086 1_2:-32587806 None:intergenic
TTCAGGAAAGCAACATGGTT+GGG 0.379726 1_2:+32587025 Msa0067580:CDS
GGCACTTGTGTCTCTAACTT+TGG 0.384215 1_2:+32588712 Msa0067580:CDS
GGGTCAATAGCAAGTCCAAT+AGG 0.385410 1_2:+32588521 Msa0067580:CDS
GAGCAAGAGAAGCATCAAAA+TGG 0.387481 1_2:-32587777 None:intergenic
TGTCTCTAACTTTGGTGATA+AGG 0.389302 1_2:+32588720 Msa0067580:CDS
ATAGATCCAAATTGCCATTA+GGG 0.390342 1_2:-32588146 None:intergenic
CCATAAACCACCTTCCTGTT+AGG 0.391547 1_2:-32587076 None:intergenic
TTAGGGTTAAAGAGGAAGTC+AGG 0.397274 1_2:+32588614 Msa0067580:CDS
TGGGTTGTCTTAACAATTGG+TGG 0.401882 1_2:+32587281 Msa0067580:CDS
TTCACCCTTCAAGTCCTAAC+AGG 0.407883 1_2:+32587062 Msa0067580:CDS
ATTTGATTTCTCTTGAGTAT+AGG 0.408543 1_2:-32587151 None:intergenic
CTTAACAAGTATGACCCTAT+TGG 0.415970 1_2:-32588536 None:intergenic
TATGTAGCATCAATTATTGT+TGG 0.419267 1_2:+32588410 Msa0067580:intron
ACCTTCCTGTTAGGACTTGA+AGG 0.420046 1_2:-32587067 None:intergenic
AAATCCCTAAACCTCCAGTA+TGG 0.420351 1_2:+32587354 Msa0067580:CDS
GTATGATCTTCACCTCTACT+TGG 0.422261 1_2:-32587974 None:intergenic
CAATGAAATCACACCTCCTT+GGG 0.429265 1_2:+32587262 Msa0067580:CDS
ATGGCAATTTGGATCTATCT+AGG 0.429608 1_2:+32588151 Msa0067580:CDS
ATGTGCTTATACATATTCAT+TGG 0.430843 1_2:+32587380 Msa0067580:CDS
TACTCAACATTGTACAATGT+TGG 0.432900 1_2:+32588500 Msa0067580:CDS
GAGTAGTCTCTCCTCTAGAT+TGG 0.434002 1_2:-32587901 None:intergenic
TTGAGCTTCTTCAAGGACTT+GGG 0.443522 1_2:+32587209 Msa0067580:CDS
ACTCAACATTGTACAATGTT+GGG 0.445413 1_2:+32588501 Msa0067580:CDS
TCAATGAAATCACACCTCCT+TGG 0.458468 1_2:+32587261 Msa0067580:CDS
GGTAGTAGAGGTGTTGTCAT+AGG 0.459692 1_2:+32587464 Msa0067580:CDS
TATAAGCACATATTCCATAC+TGG 0.466541 1_2:-32587368 None:intergenic
TAAAGCAAATGGCAGCATTA+GGG 0.468002 1_2:+32588597 Msa0067580:CDS
GTTGGTTGAACAATGAGAAT+TGG 0.470515 1_2:-32587405 None:intergenic
TCTGGAGCAAGCTACATGTT+TGG 0.475218 1_2:+32587128 Msa0067580:CDS
TATGATCTTCACCTCTACTT+GGG 0.477700 1_2:-32587973 None:intergenic
GACTTGAAGGGTGAAGCCTT+TGG 0.479566 1_2:-32587054 None:intergenic
AACCACATTTGTGTCCCTAA+TGG 0.479854 1_2:+32588132 Msa0067580:CDS
TTCACCTCTACTTGGGGAAG+AGG 0.481674 1_2:-32587966 None:intergenic
CAAAGAAGCCCTAAAGCAAA+TGG 0.484783 1_2:+32588586 Msa0067580:CDS
CAACTATACTATGCCTTCTA+CGG 0.492798 1_2:+32587530 Msa0067580:CDS
ATCTGTCTATGCATCATTTG+AGG 0.496384 1_2:-32588843 None:intergenic
ACATGTCTTTAATCCTTGCA+GGG 0.496948 1_2:+32587687 Msa0067580:CDS
CACTGCTGTTAGCCTCTTTG+GGG 0.499507 1_2:+32588691 Msa0067580:CDS
CAAGGATTAAAGACATGTAA+AGG 0.512316 1_2:-32587682 None:intergenic
TGGCAGCATTAGGGTTAAAG+AGG 0.518733 1_2:+32588606 Msa0067580:CDS
GTCTATGCATCATTTGAGGC+AGG 0.522205 1_2:-32588839 None:intergenic
AGTGGTTATCTTGGTTTGAG+TGG 0.525713 1_2:+32587494 Msa0067580:CDS
GATATGATTGAAAACAGTAC+TGG 0.531783 1_2:-32588455 None:intergenic
AACCAAGATAACCACTCAAA+AGG 0.532585 1_2:-32587487 None:intergenic
TTTCAGGAAAGCAACATGGT+TGG 0.541179 1_2:+32587024 Msa0067580:CDS
CCTCTAGATTGGTGAGTCTG+TGG 0.548972 1_2:-32587890 None:intergenic
TAGGGTTAAAGAGGAAGTCA+GGG 0.549788 1_2:+32588615 Msa0067580:CDS
GTAGCCACAATATGTGGACT+TGG 0.551117 1_2:+32588040 Msa0067580:CDS
AAAACAAACGTTACAGCAGT+TGG 0.553851 1_2:-32587593 None:intergenic
GGTCAATAGCAAGTCCAATA+GGG 0.554065 1_2:+32588522 Msa0067580:CDS
GTTGTGACTCAGAACAAGGT+TGG 0.560023 1_2:+32588815 Msa0067580:CDS
AAGAATTTCCCTGGTAGTAG+AGG 0.560197 1_2:+32587452 Msa0067580:CDS
TCTAACATAGGCATTCTCTC+AGG 0.560326 1_2:+32587233 Msa0067580:CDS
CCATAATAACAACAACAAAA+GGG 0.560980 1_2:-32587805 None:intergenic
GAAGCTCAAGAGAGTGAGAG+TGG 0.562224 1_2:-32587195 None:intergenic
GGGGAGGAGTTGAATTGCAA+TGG 0.565523 1_2:+32588635 Msa0067580:CDS
TCCACCAAGTCCACATATTG+TGG 0.566013 1_2:-32588044 None:intergenic
ATGACAACACCTCTACTACC+AGG 0.567626 1_2:-32587461 None:intergenic
TCAAGAGAGTGAGAGTGGAT+TGG 0.568198 1_2:-32587190 None:intergenic
TCTCATTGTTCAACCAACAC+TGG 0.569882 1_2:+32587410 Msa0067580:CDS
AATGTGGTTATACTATGTGC+AGG 0.572229 1_2:-32588118 None:intergenic
AAGGACTTGGGATCTAACAT+AGG 0.575857 1_2:+32587221 Msa0067580:CDS
TGCCATTAGGGACACAAATG+TGG 0.577289 1_2:-32588134 None:intergenic
GTTAAAGAGGAAGTCAGGGG+AGG 0.578014 1_2:+32588619 Msa0067580:CDS
TTGTTATTATGGAAGAACAA+AGG 0.585080 1_2:+32587816 Msa0067580:CDS
GCACTATGATCATTATCATG+AGG 0.591440 1_2:-32587712 None:intergenic
GTTTCCTCTTCCCCAAGTAG+AGG 0.594548 1_2:+32587962 Msa0067580:CDS
ACTAGTGTAAAGAATTTCCC+TGG 0.597323 1_2:+32587443 Msa0067580:CDS
GCCACAATATGTGGACTTGG+TGG 0.598104 1_2:+32588043 Msa0067580:CDS
ATGATCTTCACCTCTACTTG+GGG 0.609933 1_2:-32587972 None:intergenic
CCCTTCAAGTCCTAACAGGA+AGG 0.612591 1_2:+32587066 Msa0067580:CDS
TTATCATGAGGAACCCTGCA+AGG 0.614007 1_2:-32587700 None:intergenic
CCAATTGTTAAGACAACCCA+AGG 0.620677 1_2:-32587278 None:intergenic
CCTTCCTGTTAGGACTTGAA+GGG 0.626337 1_2:-32587066 None:intergenic
GAGACACAAGTGCCCCAAAG+AGG 0.631794 1_2:-32588703 None:intergenic
TGACAACACCTCTACTACCA+GGG 0.633964 1_2:-32587460 None:intergenic
AGTGACTAAAGCTCCAGTGT+TGG 0.645448 1_2:-32587423 None:intergenic
AAGCACATATTCCATACTGG+AGG 0.647458 1_2:-32587365 None:intergenic
TTCAAGTCCTAACAGGAAGG+TGG 0.648884 1_2:+32587069 Msa0067580:CDS
AGGGTTAAAGAGGAAGTCAG+GGG 0.655064 1_2:+32588616 Msa0067580:CDS
ACTTGGTGGAACTCTTACTG+TGG 0.667152 1_2:+32588057 Msa0067580:CDS
TGAGTCTGTGGCTTAGAAGG+AGG 0.667868 1_2:-32587878 None:intergenic
ATTGGTTGTGACTCAGAACA+AGG 0.669577 1_2:+32588811 Msa0067580:CDS
CATGGTTGGGAAAACACCAA+AGG 0.678908 1_2:+32587038 Msa0067580:CDS
CCACAGACTCACCAATCTAG+AGG 0.680979 1_2:+32587890 Msa0067580:CDS
TAATAACAACAACAAAAGGG+AGG 0.691455 1_2:-32587802 None:intergenic
ATTGTTAAGACAACCCAAGG+AGG 0.744267 1_2:-32587275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAATAATGAAAATGAAT+TGG + chr1_2:32588793-32588812 Msa0067580:CDS 15.0%
!! TAGAAATAATGAAAATGAAT+TGG + chr1_2:32588793-32588812 Msa0067580:CDS 15.0%
!! CATAAGCAAAATTAAAGATT+TGG - chr1_2:32587564-32587583 None:intergenic 20.0%
!!! CAAATCTTTAATTTTGCTTA+TGG + chr1_2:32587562-32587581 Msa0067580:CDS 20.0%
!! AAGGAAATTATAAAAAGCTT+TGG - chr1_2:32587666-32587685 None:intergenic 20.0%
!! CATAAGCAAAATTAAAGATT+TGG - chr1_2:32587564-32587583 None:intergenic 20.0%
!!! CAAATCTTTAATTTTGCTTA+TGG + chr1_2:32587562-32587581 Msa0067580:CDS 20.0%
!! AAGGAAATTATAAAAAGCTT+TGG - chr1_2:32587666-32587685 None:intergenic 20.0%
!! ATTTGATTTCTCTTGAGTAT+AGG - chr1_2:32587154-32587173 None:intergenic 25.0%
!! AAGAGAAATCAAATCAGTTT+TGG + chr1_2:32587160-32587179 Msa0067580:CDS 25.0%
!! AGAGAAATCAAATCAGTTTT+GGG + chr1_2:32587161-32587180 Msa0067580:CDS 25.0%
!!! TTTTTGGCTATTTCATGATT+TGG + chr1_2:32587315-32587334 Msa0067580:CDS 25.0%
! ATGTGCTTATACATATTCAT+TGG + chr1_2:32587380-32587399 Msa0067580:CDS 25.0%
!!! TAAAAAGCTTTGGAATCATT+TGG - chr1_2:32587656-32587675 None:intergenic 25.0%
! CCATAATAACAACAACAAAA+GGG - chr1_2:32587808-32587827 None:intergenic 25.0%
! TCCATAATAACAACAACAAA+AGG - chr1_2:32587809-32587828 None:intergenic 25.0%
!! TTGTTATTATGGAAGAACAA+AGG + chr1_2:32587816-32587835 Msa0067580:CDS 25.0%
! GTAAATAACTTGAGTCAAAT+TGG + chr1_2:32588079-32588098 Msa0067580:CDS 25.0%
! AGTCAAATTGGATTATCTTT+AGG + chr1_2:32588091-32588110 Msa0067580:CDS 25.0%
!!! ATCCTTATATTGTCTTGTTT+TGG + chr1_2:32588350-32588369 Msa0067580:intron 25.0%
! TATGTAGCATCAATTATTGT+TGG + chr1_2:32588410-32588429 Msa0067580:intron 25.0%
!! ATTTGATTTCTCTTGAGTAT+AGG - chr1_2:32587154-32587173 None:intergenic 25.0%
!! AAGAGAAATCAAATCAGTTT+TGG + chr1_2:32587160-32587179 Msa0067580:CDS 25.0%
!! AGAGAAATCAAATCAGTTTT+GGG + chr1_2:32587161-32587180 Msa0067580:CDS 25.0%
!!! TTTTTGGCTATTTCATGATT+TGG + chr1_2:32587315-32587334 Msa0067580:CDS 25.0%
! ATGTGCTTATACATATTCAT+TGG + chr1_2:32587380-32587399 Msa0067580:CDS 25.0%
!!! TAAAAAGCTTTGGAATCATT+TGG - chr1_2:32587656-32587675 None:intergenic 25.0%
! CCATAATAACAACAACAAAA+GGG - chr1_2:32587808-32587827 None:intergenic 25.0%
! TCCATAATAACAACAACAAA+AGG - chr1_2:32587809-32587828 None:intergenic 25.0%
!! TTGTTATTATGGAAGAACAA+AGG + chr1_2:32587816-32587835 Msa0067580:CDS 25.0%
! GTAAATAACTTGAGTCAAAT+TGG + chr1_2:32588079-32588098 Msa0067580:CDS 25.0%
! AGTCAAATTGGATTATCTTT+AGG + chr1_2:32588091-32588110 Msa0067580:CDS 25.0%
!!! ATCCTTATATTGTCTTGTTT+TGG + chr1_2:32588350-32588369 Msa0067580:intron 25.0%
! TATGTAGCATCAATTATTGT+TGG + chr1_2:32588410-32588429 Msa0067580:intron 25.0%
TTTATGATCATGTCAGTATC+TGG + chr1_2:32587110-32587129 Msa0067580:CDS 30.0%
TATAAGCACATATTCCATAC+TGG - chr1_2:32587371-32587390 None:intergenic 30.0%
!! CTTTAATTTTGCTTATGGCT+TGG + chr1_2:32587567-32587586 Msa0067580:CDS 30.0%
CAAGGATTAAAGACATGTAA+AGG - chr1_2:32587685-32587704 None:intergenic 30.0%
TAATAACAACAACAAAAGGG+AGG - chr1_2:32587805-32587824 None:intergenic 30.0%
!!! CCCTTTTGTTGTTGTTATTA+TGG + chr1_2:32587805-32587824 Msa0067580:CDS 30.0%
TTATGGAAGAACAAAGGATT+TGG + chr1_2:32587822-32587841 Msa0067580:CDS 30.0%
ATAGATCCAAATTGCCATTA+GGG - chr1_2:32588149-32588168 None:intergenic 30.0%
TATCTAGGTAAAGTTACACA+AGG + chr1_2:32588166-32588185 Msa0067580:intron 30.0%
ATCTAGGTAAAGTTACACAA+GGG + chr1_2:32588167-32588186 Msa0067580:intron 30.0%
GACCAAAACAAGACAATATA+AGG - chr1_2:32588355-32588374 None:intergenic 30.0%
!! ATTATTGTTGGTTTCTGCTT+TGG + chr1_2:32588422-32588441 Msa0067580:CDS 30.0%
GATATGATTGAAAACAGTAC+TGG - chr1_2:32588458-32588477 None:intergenic 30.0%
TCAATCATATCTGAACTCTT+TGG + chr1_2:32588467-32588486 Msa0067580:CDS 30.0%
TACTCAACATTGTACAATGT+TGG + chr1_2:32588500-32588519 Msa0067580:CDS 30.0%
ACTCAACATTGTACAATGTT+GGG + chr1_2:32588501-32588520 Msa0067580:CDS 30.0%
! GTCATACTTGTTAAGTGTTA+GGG + chr1_2:32588544-32588563 Msa0067580:CDS 30.0%
CATATACAAAAAGTTCAGAG+AGG + chr1_2:32588766-32588785 Msa0067580:CDS 30.0%
TTTATGATCATGTCAGTATC+TGG + chr1_2:32587110-32587129 Msa0067580:CDS 30.0%
TATAAGCACATATTCCATAC+TGG - chr1_2:32587371-32587390 None:intergenic 30.0%
!! CTTTAATTTTGCTTATGGCT+TGG + chr1_2:32587567-32587586 Msa0067580:CDS 30.0%
CAAGGATTAAAGACATGTAA+AGG - chr1_2:32587685-32587704 None:intergenic 30.0%
TAATAACAACAACAAAAGGG+AGG - chr1_2:32587805-32587824 None:intergenic 30.0%
!!! CCCTTTTGTTGTTGTTATTA+TGG + chr1_2:32587805-32587824 Msa0067580:CDS 30.0%
TTATGGAAGAACAAAGGATT+TGG + chr1_2:32587822-32587841 Msa0067580:CDS 30.0%
ATAGATCCAAATTGCCATTA+GGG - chr1_2:32588149-32588168 None:intergenic 30.0%
TATCTAGGTAAAGTTACACA+AGG + chr1_2:32588166-32588185 Msa0067580:intron 30.0%
ATCTAGGTAAAGTTACACAA+GGG + chr1_2:32588167-32588186 Msa0067580:intron 30.0%
GACCAAAACAAGACAATATA+AGG - chr1_2:32588355-32588374 None:intergenic 30.0%
!! ATTATTGTTGGTTTCTGCTT+TGG + chr1_2:32588422-32588441 Msa0067580:CDS 30.0%
GATATGATTGAAAACAGTAC+TGG - chr1_2:32588458-32588477 None:intergenic 30.0%
TCAATCATATCTGAACTCTT+TGG + chr1_2:32588467-32588486 Msa0067580:CDS 30.0%
TACTCAACATTGTACAATGT+TGG + chr1_2:32588500-32588519 Msa0067580:CDS 30.0%
ACTCAACATTGTACAATGTT+GGG + chr1_2:32588501-32588520 Msa0067580:CDS 30.0%
! GTCATACTTGTTAAGTGTTA+GGG + chr1_2:32588544-32588563 Msa0067580:CDS 30.0%
CATATACAAAAAGTTCAGAG+AGG + chr1_2:32588766-32588785 Msa0067580:CDS 30.0%
!! GTATTTTCAGGAAAGCAACA+TGG + chr1_2:32587020-32587039 Msa0067580:CDS 35.0%
TATTCCATACTGGAGGTTTA+GGG - chr1_2:32587361-32587380 None:intergenic 35.0%
ATATTCCATACTGGAGGTTT+AGG - chr1_2:32587362-32587381 None:intergenic 35.0%
GTTGGTTGAACAATGAGAAT+TGG - chr1_2:32587408-32587427 None:intergenic 35.0%
ACTAGTGTAAAGAATTTCCC+TGG + chr1_2:32587443-32587462 Msa0067580:CDS 35.0%
AACCAAGATAACCACTCAAA+AGG - chr1_2:32587490-32587509 None:intergenic 35.0%
CAACTATACTATGCCTTCTA+CGG + chr1_2:32587530-32587549 Msa0067580:CDS 35.0%
AAAACAAACGTTACAGCAGT+TGG - chr1_2:32587596-32587615 None:intergenic 35.0%
CTCTTATGGTGCTTAATAAC+TGG - chr1_2:32587623-32587642 None:intergenic 35.0%
TACATGTCTTTAATCCTTGC+AGG + chr1_2:32587686-32587705 Msa0067580:CDS 35.0%
ACATGTCTTTAATCCTTGCA+GGG + chr1_2:32587687-32587706 Msa0067580:CDS 35.0%
GCACTATGATCATTATCATG+AGG - chr1_2:32587715-32587734 None:intergenic 35.0%
TATGATCTTCACCTCTACTT+GGG - chr1_2:32587976-32587995 None:intergenic 35.0%
CAAAAAGAGTCATCATGTCA+AGG - chr1_2:32588021-32588040 None:intergenic 35.0%
! CTTTTTGTAGCCACAATATG+TGG + chr1_2:32588034-32588053 Msa0067580:CDS 35.0%
AATGTGGTTATACTATGTGC+AGG - chr1_2:32588121-32588140 None:intergenic 35.0%
GATAGATCCAAATTGCCATT+AGG - chr1_2:32588150-32588169 None:intergenic 35.0%
ATGGCAATTTGGATCTATCT+AGG + chr1_2:32588151-32588170 Msa0067580:CDS 35.0%
TCTAGGTAAAGTTACACAAG+GGG + chr1_2:32588168-32588187 Msa0067580:intron 35.0%
GGACATCAAATGCAATTAGA+AGG - chr1_2:32588379-32588398 None:intergenic 35.0%
ATGCTACATAAAGACCATGT+GGG - chr1_2:32588400-32588419 None:intergenic 35.0%
CTTAACAAGTATGACCCTAT+TGG - chr1_2:32588539-32588558 None:intergenic 35.0%
! GGTCATACTTGTTAAGTGTT+AGG + chr1_2:32588543-32588562 Msa0067580:CDS 35.0%
! TAATGCTGCCATTTGCTTTA+GGG - chr1_2:32588597-32588616 None:intergenic 35.0%
TAAAGCAAATGGCAGCATTA+GGG + chr1_2:32588597-32588616 Msa0067580:CDS 35.0%
TGGAAGTGAATGCTACAAAT+TGG + chr1_2:32588655-32588674 Msa0067580:CDS 35.0%
! TGTCTCTAACTTTGGTGATA+AGG + chr1_2:32588720-32588739 Msa0067580:CDS 35.0%
!! GTATTTTCAGGAAAGCAACA+TGG + chr1_2:32587020-32587039 Msa0067580:CDS 35.0%
TATTCCATACTGGAGGTTTA+GGG - chr1_2:32587361-32587380 None:intergenic 35.0%
ATATTCCATACTGGAGGTTT+AGG - chr1_2:32587362-32587381 None:intergenic 35.0%
GTTGGTTGAACAATGAGAAT+TGG - chr1_2:32587408-32587427 None:intergenic 35.0%
ACTAGTGTAAAGAATTTCCC+TGG + chr1_2:32587443-32587462 Msa0067580:CDS 35.0%
AACCAAGATAACCACTCAAA+AGG - chr1_2:32587490-32587509 None:intergenic 35.0%
CAACTATACTATGCCTTCTA+CGG + chr1_2:32587530-32587549 Msa0067580:CDS 35.0%
AAAACAAACGTTACAGCAGT+TGG - chr1_2:32587596-32587615 None:intergenic 35.0%
CTCTTATGGTGCTTAATAAC+TGG - chr1_2:32587623-32587642 None:intergenic 35.0%
TACATGTCTTTAATCCTTGC+AGG + chr1_2:32587686-32587705 Msa0067580:CDS 35.0%
ACATGTCTTTAATCCTTGCA+GGG + chr1_2:32587687-32587706 Msa0067580:CDS 35.0%
GCACTATGATCATTATCATG+AGG - chr1_2:32587715-32587734 None:intergenic 35.0%
TATGATCTTCACCTCTACTT+GGG - chr1_2:32587976-32587995 None:intergenic 35.0%
CAAAAAGAGTCATCATGTCA+AGG - chr1_2:32588021-32588040 None:intergenic 35.0%
! CTTTTTGTAGCCACAATATG+TGG + chr1_2:32588034-32588053 Msa0067580:CDS 35.0%
AATGTGGTTATACTATGTGC+AGG - chr1_2:32588121-32588140 None:intergenic 35.0%
GATAGATCCAAATTGCCATT+AGG - chr1_2:32588150-32588169 None:intergenic 35.0%
ATGGCAATTTGGATCTATCT+AGG + chr1_2:32588151-32588170 Msa0067580:CDS 35.0%
TCTAGGTAAAGTTACACAAG+GGG + chr1_2:32588168-32588187 Msa0067580:intron 35.0%
GGACATCAAATGCAATTAGA+AGG - chr1_2:32588379-32588398 None:intergenic 35.0%
ATGCTACATAAAGACCATGT+GGG - chr1_2:32588400-32588419 None:intergenic 35.0%
CTTAACAAGTATGACCCTAT+TGG - chr1_2:32588539-32588558 None:intergenic 35.0%
! GGTCATACTTGTTAAGTGTT+AGG + chr1_2:32588543-32588562 Msa0067580:CDS 35.0%
! TAATGCTGCCATTTGCTTTA+GGG - chr1_2:32588597-32588616 None:intergenic 35.0%
TAAAGCAAATGGCAGCATTA+GGG + chr1_2:32588597-32588616 Msa0067580:CDS 35.0%
TGGAAGTGAATGCTACAAAT+TGG + chr1_2:32588655-32588674 Msa0067580:CDS 35.0%
! TGTCTCTAACTTTGGTGATA+AGG + chr1_2:32588720-32588739 Msa0067580:CDS 35.0%
TTTCAGGAAAGCAACATGGT+TGG + chr1_2:32587024-32587043 Msa0067580:CDS 40.0%
TTCAGGAAAGCAACATGGTT+GGG + chr1_2:32587025-32587044 Msa0067580:CDS 40.0%
TTGAGCTTCTTCAAGGACTT+GGG + chr1_2:32587209-32587228 Msa0067580:CDS 40.0%
AAGGACTTGGGATCTAACAT+AGG + chr1_2:32587221-32587240 Msa0067580:CDS 40.0%
TCTAACATAGGCATTCTCTC+AGG + chr1_2:32587233-32587252 Msa0067580:CDS 40.0%
TCAATGAAATCACACCTCCT+TGG + chr1_2:32587261-32587280 Msa0067580:CDS 40.0%
CAATGAAATCACACCTCCTT+GGG + chr1_2:32587262-32587281 Msa0067580:CDS 40.0%
ATTGTTAAGACAACCCAAGG+AGG - chr1_2:32587278-32587297 None:intergenic 40.0%
CCAATTGTTAAGACAACCCA+AGG - chr1_2:32587281-32587300 None:intergenic 40.0%
! CCTTGGGTTGTCTTAACAAT+TGG + chr1_2:32587278-32587297 Msa0067580:CDS 40.0%
TGGGTTGTCTTAACAATTGG+TGG + chr1_2:32587281-32587300 Msa0067580:CDS 40.0%
!!! GGTGGTCTTCTCAACTTTTT+TGG + chr1_2:32587299-32587318 Msa0067580:CDS 40.0%
AAATCCCTAAACCTCCAGTA+TGG + chr1_2:32587354-32587373 Msa0067580:CDS 40.0%
AAGCACATATTCCATACTGG+AGG - chr1_2:32587368-32587387 None:intergenic 40.0%
TCTCATTGTTCAACCAACAC+TGG + chr1_2:32587410-32587429 Msa0067580:CDS 40.0%
AAGAATTTCCCTGGTAGTAG+AGG + chr1_2:32587452-32587471 Msa0067580:CDS 40.0%
! AGTGGTTATCTTGGTTTGAG+TGG + chr1_2:32587494-32587513 Msa0067580:CDS 40.0%
! TTTGGAGTCATTTCCGTAGA+AGG - chr1_2:32587546-32587565 None:intergenic 40.0%
TTGGTTGTTCAGCTCTCTTA+TGG - chr1_2:32587637-32587656 None:intergenic 40.0%
!! GAGCAAGAGAAGCATCAAAA+TGG - chr1_2:32587780-32587799 None:intergenic 40.0%
ATGATCTTCACCTCTACTTG+GGG - chr1_2:32587975-32587994 None:intergenic 40.0%
GTATGATCTTCACCTCTACT+TGG - chr1_2:32587977-32587996 None:intergenic 40.0%
CATCATGTCAAGGCTGAAAA+TGG - chr1_2:32588011-32588030 None:intergenic 40.0%
AACCACATTTGTGTCCCTAA+TGG + chr1_2:32588132-32588151 Msa0067580:CDS 40.0%
TTGTGTCCCTAATGGCAATT+TGG + chr1_2:32588140-32588159 Msa0067580:CDS 40.0%
ATTGCATTTGATGTCCCACA+TGG + chr1_2:32588383-32588402 Msa0067580:intron 40.0%
GATGCTACATAAAGACCATG+TGG - chr1_2:32588401-32588420 None:intergenic 40.0%
! GTTTCTGCTTTGGTGCAAAT+TGG + chr1_2:32588432-32588451 Msa0067580:CDS 40.0%
GGTCAATAGCAAGTCCAATA+GGG + chr1_2:32588522-32588541 Msa0067580:CDS 40.0%
TTGTTAAGTGTTAGGGTTGC+TGG + chr1_2:32588551-32588570 Msa0067580:CDS 40.0%
CAAAGAAGCCCTAAAGCAAA+TGG + chr1_2:32588586-32588605 Msa0067580:CDS 40.0%
! CTAATGCTGCCATTTGCTTT+AGG - chr1_2:32588598-32588617 None:intergenic 40.0%
CTAAAGCAAATGGCAGCATT+AGG + chr1_2:32588596-32588615 Msa0067580:CDS 40.0%
TTAGGGTTAAAGAGGAAGTC+AGG + chr1_2:32588614-32588633 Msa0067580:CDS 40.0%
TAGGGTTAAAGAGGAAGTCA+GGG + chr1_2:32588615-32588634 Msa0067580:CDS 40.0%
ATTGGTTGTGACTCAGAACA+AGG + chr1_2:32588811-32588830 Msa0067580:CDS 40.0%
TTTCAGGAAAGCAACATGGT+TGG + chr1_2:32587024-32587043 Msa0067580:CDS 40.0%
TTCAGGAAAGCAACATGGTT+GGG + chr1_2:32587025-32587044 Msa0067580:CDS 40.0%
TTGAGCTTCTTCAAGGACTT+GGG + chr1_2:32587209-32587228 Msa0067580:CDS 40.0%
AAGGACTTGGGATCTAACAT+AGG + chr1_2:32587221-32587240 Msa0067580:CDS 40.0%
TCTAACATAGGCATTCTCTC+AGG + chr1_2:32587233-32587252 Msa0067580:CDS 40.0%
TCAATGAAATCACACCTCCT+TGG + chr1_2:32587261-32587280 Msa0067580:CDS 40.0%
CAATGAAATCACACCTCCTT+GGG + chr1_2:32587262-32587281 Msa0067580:CDS 40.0%
ATTGTTAAGACAACCCAAGG+AGG - chr1_2:32587278-32587297 None:intergenic 40.0%
CCAATTGTTAAGACAACCCA+AGG - chr1_2:32587281-32587300 None:intergenic 40.0%
! CCTTGGGTTGTCTTAACAAT+TGG + chr1_2:32587278-32587297 Msa0067580:CDS 40.0%
TGGGTTGTCTTAACAATTGG+TGG + chr1_2:32587281-32587300 Msa0067580:CDS 40.0%
!!! GGTGGTCTTCTCAACTTTTT+TGG + chr1_2:32587299-32587318 Msa0067580:CDS 40.0%
AAATCCCTAAACCTCCAGTA+TGG + chr1_2:32587354-32587373 Msa0067580:CDS 40.0%
AAGCACATATTCCATACTGG+AGG - chr1_2:32587368-32587387 None:intergenic 40.0%
TCTCATTGTTCAACCAACAC+TGG + chr1_2:32587410-32587429 Msa0067580:CDS 40.0%
AAGAATTTCCCTGGTAGTAG+AGG + chr1_2:32587452-32587471 Msa0067580:CDS 40.0%
! AGTGGTTATCTTGGTTTGAG+TGG + chr1_2:32587494-32587513 Msa0067580:CDS 40.0%
! TTTGGAGTCATTTCCGTAGA+AGG - chr1_2:32587546-32587565 None:intergenic 40.0%
TTGGTTGTTCAGCTCTCTTA+TGG - chr1_2:32587637-32587656 None:intergenic 40.0%
!! GAGCAAGAGAAGCATCAAAA+TGG - chr1_2:32587780-32587799 None:intergenic 40.0%
ATGATCTTCACCTCTACTTG+GGG - chr1_2:32587975-32587994 None:intergenic 40.0%
GTATGATCTTCACCTCTACT+TGG - chr1_2:32587977-32587996 None:intergenic 40.0%
CATCATGTCAAGGCTGAAAA+TGG - chr1_2:32588011-32588030 None:intergenic 40.0%
AACCACATTTGTGTCCCTAA+TGG + chr1_2:32588132-32588151 Msa0067580:CDS 40.0%
TTGTGTCCCTAATGGCAATT+TGG + chr1_2:32588140-32588159 Msa0067580:CDS 40.0%
ATTGCATTTGATGTCCCACA+TGG + chr1_2:32588383-32588402 Msa0067580:intron 40.0%
GATGCTACATAAAGACCATG+TGG - chr1_2:32588401-32588420 None:intergenic 40.0%
! GTTTCTGCTTTGGTGCAAAT+TGG + chr1_2:32588432-32588451 Msa0067580:CDS 40.0%
GGTCAATAGCAAGTCCAATA+GGG + chr1_2:32588522-32588541 Msa0067580:CDS 40.0%
TTGTTAAGTGTTAGGGTTGC+TGG + chr1_2:32588551-32588570 Msa0067580:CDS 40.0%
CAAAGAAGCCCTAAAGCAAA+TGG + chr1_2:32588586-32588605 Msa0067580:CDS 40.0%
! CTAATGCTGCCATTTGCTTT+AGG - chr1_2:32588598-32588617 None:intergenic 40.0%
CTAAAGCAAATGGCAGCATT+AGG + chr1_2:32588596-32588615 Msa0067580:CDS 40.0%
TTAGGGTTAAAGAGGAAGTC+AGG + chr1_2:32588614-32588633 Msa0067580:CDS 40.0%
TAGGGTTAAAGAGGAAGTCA+GGG + chr1_2:32588615-32588634 Msa0067580:CDS 40.0%
ATTGGTTGTGACTCAGAACA+AGG + chr1_2:32588811-32588830 Msa0067580:CDS 40.0%
CATGGTTGGGAAAACACCAA+AGG + chr1_2:32587038-32587057 Msa0067580:CDS 45.0%
TTCACCCTTCAAGTCCTAAC+AGG + chr1_2:32587062-32587081 Msa0067580:CDS 45.0%
CCTTCCTGTTAGGACTTGAA+GGG - chr1_2:32587069-32587088 None:intergenic 45.0%
ACCTTCCTGTTAGGACTTGA+AGG - chr1_2:32587070-32587089 None:intergenic 45.0%
TTCAAGTCCTAACAGGAAGG+TGG + chr1_2:32587069-32587088 Msa0067580:CDS 45.0%
CCATAAACCACCTTCCTGTT+AGG - chr1_2:32587079-32587098 None:intergenic 45.0%
CCTAACAGGAAGGTGGTTTA+TGG + chr1_2:32587076-32587095 Msa0067580:CDS 45.0%
! TCTGGAGCAAGCTACATGTT+TGG + chr1_2:32587128-32587147 Msa0067580:CDS 45.0%
TCAAGAGAGTGAGAGTGGAT+TGG - chr1_2:32587193-32587212 None:intergenic 45.0%
CACTCTCTTGAGCTTCTTCA+AGG + chr1_2:32587202-32587221 Msa0067580:CDS 45.0%
CTTGAGCTTCTTCAAGGACT+TGG + chr1_2:32587208-32587227 Msa0067580:CDS 45.0%
AGTGACTAAAGCTCCAGTGT+TGG - chr1_2:32587426-32587445 None:intergenic 45.0%
TGACAACACCTCTACTACCA+GGG - chr1_2:32587463-32587482 None:intergenic 45.0%
ATGACAACACCTCTACTACC+AGG - chr1_2:32587464-32587483 None:intergenic 45.0%
!! GGTAGTAGAGGTGTTGTCAT+AGG + chr1_2:32587464-32587483 Msa0067580:CDS 45.0%
! GTTGTCATAGGCCTTTTGAG+TGG + chr1_2:32587476-32587495 Msa0067580:CDS 45.0%
!! GGCCTTTTGAGTGGTTATCT+TGG + chr1_2:32587485-32587504 Msa0067580:CDS 45.0%
TTATCATGAGGAACCCTGCA+AGG - chr1_2:32587703-32587722 None:intergenic 45.0%
GAGTAGTCTCTCCTCTAGAT+TGG - chr1_2:32587904-32587923 None:intergenic 45.0%
GTAGCCACAATATGTGGACT+TGG + chr1_2:32588040-32588059 Msa0067580:CDS 45.0%
TCCACCAAGTCCACATATTG+TGG - chr1_2:32588047-32588066 None:intergenic 45.0%
! ACTTGGTGGAACTCTTACTG+TGG + chr1_2:32588057-32588076 Msa0067580:CDS 45.0%
TGCCATTAGGGACACAAATG+TGG - chr1_2:32588137-32588156 None:intergenic 45.0%
AGGATTGATGTGAGCATGAG+AGG - chr1_2:32588335-32588354 None:intergenic 45.0%
GGGTCAATAGCAAGTCCAAT+AGG + chr1_2:32588521-32588540 Msa0067580:CDS 45.0%
TGGCAGCATTAGGGTTAAAG+AGG + chr1_2:32588606-32588625 Msa0067580:CDS 45.0%
AGGGTTAAAGAGGAAGTCAG+GGG + chr1_2:32588616-32588635 Msa0067580:CDS 45.0%
! ATCACTGCTGTTAGCCTCTT+TGG + chr1_2:32588689-32588708 Msa0067580:CDS 45.0%
! TCACTGCTGTTAGCCTCTTT+GGG + chr1_2:32588690-32588709 Msa0067580:CDS 45.0%
GGCACTTGTGTCTCTAACTT+TGG + chr1_2:32588712-32588731 Msa0067580:CDS 45.0%
GTTGTGACTCAGAACAAGGT+TGG + chr1_2:32588815-32588834 Msa0067580:CDS 45.0%
CATGGTTGGGAAAACACCAA+AGG + chr1_2:32587038-32587057 Msa0067580:CDS 45.0%
TTCACCCTTCAAGTCCTAAC+AGG + chr1_2:32587062-32587081 Msa0067580:CDS 45.0%
CCTTCCTGTTAGGACTTGAA+GGG - chr1_2:32587069-32587088 None:intergenic 45.0%
ACCTTCCTGTTAGGACTTGA+AGG - chr1_2:32587070-32587089 None:intergenic 45.0%
TTCAAGTCCTAACAGGAAGG+TGG + chr1_2:32587069-32587088 Msa0067580:CDS 45.0%
CCATAAACCACCTTCCTGTT+AGG - chr1_2:32587079-32587098 None:intergenic 45.0%
CCTAACAGGAAGGTGGTTTA+TGG + chr1_2:32587076-32587095 Msa0067580:CDS 45.0%
! TCTGGAGCAAGCTACATGTT+TGG + chr1_2:32587128-32587147 Msa0067580:CDS 45.0%
TCAAGAGAGTGAGAGTGGAT+TGG - chr1_2:32587193-32587212 None:intergenic 45.0%
CACTCTCTTGAGCTTCTTCA+AGG + chr1_2:32587202-32587221 Msa0067580:CDS 45.0%
CTTGAGCTTCTTCAAGGACT+TGG + chr1_2:32587208-32587227 Msa0067580:CDS 45.0%
AGTGACTAAAGCTCCAGTGT+TGG - chr1_2:32587426-32587445 None:intergenic 45.0%
TGACAACACCTCTACTACCA+GGG - chr1_2:32587463-32587482 None:intergenic 45.0%
ATGACAACACCTCTACTACC+AGG - chr1_2:32587464-32587483 None:intergenic 45.0%
!! GGTAGTAGAGGTGTTGTCAT+AGG + chr1_2:32587464-32587483 Msa0067580:CDS 45.0%
! GTTGTCATAGGCCTTTTGAG+TGG + chr1_2:32587476-32587495 Msa0067580:CDS 45.0%
!! GGCCTTTTGAGTGGTTATCT+TGG + chr1_2:32587485-32587504 Msa0067580:CDS 45.0%
TTATCATGAGGAACCCTGCA+AGG - chr1_2:32587703-32587722 None:intergenic 45.0%
GAGTAGTCTCTCCTCTAGAT+TGG - chr1_2:32587904-32587923 None:intergenic 45.0%
GTAGCCACAATATGTGGACT+TGG + chr1_2:32588040-32588059 Msa0067580:CDS 45.0%
TCCACCAAGTCCACATATTG+TGG - chr1_2:32588047-32588066 None:intergenic 45.0%
! ACTTGGTGGAACTCTTACTG+TGG + chr1_2:32588057-32588076 Msa0067580:CDS 45.0%
TGCCATTAGGGACACAAATG+TGG - chr1_2:32588137-32588156 None:intergenic 45.0%
AGGATTGATGTGAGCATGAG+AGG - chr1_2:32588335-32588354 None:intergenic 45.0%
GGGTCAATAGCAAGTCCAAT+AGG + chr1_2:32588521-32588540 Msa0067580:CDS 45.0%
TGGCAGCATTAGGGTTAAAG+AGG + chr1_2:32588606-32588625 Msa0067580:CDS 45.0%
AGGGTTAAAGAGGAAGTCAG+GGG + chr1_2:32588616-32588635 Msa0067580:CDS 45.0%
! ATCACTGCTGTTAGCCTCTT+TGG + chr1_2:32588689-32588708 Msa0067580:CDS 45.0%
! TCACTGCTGTTAGCCTCTTT+GGG + chr1_2:32588690-32588709 Msa0067580:CDS 45.0%
GGCACTTGTGTCTCTAACTT+TGG + chr1_2:32588712-32588731 Msa0067580:CDS 45.0%
GTTGTGACTCAGAACAAGGT+TGG + chr1_2:32588815-32588834 Msa0067580:CDS 45.0%
GACTTGAAGGGTGAAGCCTT+TGG - chr1_2:32587057-32587076 None:intergenic 50.0%
CCCTTCAAGTCCTAACAGGA+AGG + chr1_2:32587066-32587085 Msa0067580:CDS 50.0%
GAAGCTCAAGAGAGTGAGAG+TGG - chr1_2:32587198-32587217 None:intergenic 50.0%
TGAGTCTGTGGCTTAGAAGG+AGG - chr1_2:32587881-32587900 None:intergenic 50.0%
TGGTGAGTCTGTGGCTTAGA+AGG - chr1_2:32587884-32587903 None:intergenic 50.0%
CCTCTAGATTGGTGAGTCTG+TGG - chr1_2:32587893-32587912 None:intergenic 50.0%
CCACAGACTCACCAATCTAG+AGG + chr1_2:32587890-32587909 Msa0067580:CDS 50.0%
GTTTCCTCTTCCCCAAGTAG+AGG + chr1_2:32587962-32587981 Msa0067580:CDS 50.0%
TTCACCTCTACTTGGGGAAG+AGG - chr1_2:32587969-32587988 None:intergenic 50.0%
GCCACAATATGTGGACTTGG+TGG + chr1_2:32588043-32588062 Msa0067580:CDS 50.0%
GTTAAAGAGGAAGTCAGGGG+AGG + chr1_2:32588619-32588638 Msa0067580:CDS 50.0%
GGGGAGGAGTTGAATTGCAA+TGG + chr1_2:32588635-32588654 Msa0067580:CDS 50.0%
! CACTGCTGTTAGCCTCTTTG+GGG + chr1_2:32588691-32588710 Msa0067580:CDS 50.0%
GACTTGAAGGGTGAAGCCTT+TGG - chr1_2:32587057-32587076 None:intergenic 50.0%
CCCTTCAAGTCCTAACAGGA+AGG + chr1_2:32587066-32587085 Msa0067580:CDS 50.0%
GAAGCTCAAGAGAGTGAGAG+TGG - chr1_2:32587198-32587217 None:intergenic 50.0%
TGAGTCTGTGGCTTAGAAGG+AGG - chr1_2:32587881-32587900 None:intergenic 50.0%
TGGTGAGTCTGTGGCTTAGA+AGG - chr1_2:32587884-32587903 None:intergenic 50.0%
CCTCTAGATTGGTGAGTCTG+TGG - chr1_2:32587893-32587912 None:intergenic 50.0%
CCACAGACTCACCAATCTAG+AGG + chr1_2:32587890-32587909 Msa0067580:CDS 50.0%
GTTTCCTCTTCCCCAAGTAG+AGG + chr1_2:32587962-32587981 Msa0067580:CDS 50.0%
TTCACCTCTACTTGGGGAAG+AGG - chr1_2:32587969-32587988 None:intergenic 50.0%
GCCACAATATGTGGACTTGG+TGG + chr1_2:32588043-32588062 Msa0067580:CDS 50.0%
GTTAAAGAGGAAGTCAGGGG+AGG + chr1_2:32588619-32588638 Msa0067580:CDS 50.0%
GGGGAGGAGTTGAATTGCAA+TGG + chr1_2:32588635-32588654 Msa0067580:CDS 50.0%
! CACTGCTGTTAGCCTCTTTG+GGG + chr1_2:32588691-32588710 Msa0067580:CDS 50.0%
GAGACACAAGTGCCCCAAAG+AGG - chr1_2:32588706-32588725 None:intergenic 55.0%
GAGACACAAGTGCCCCAAAG+AGG - chr1_2:32588706-32588725 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 32587017 32588859 32587017 ID=Msa0067580;Name=Msa0067580
chr1_2 mRNA 32587017 32588859 32587017 ID=Msa0067580-mRNA-1;Parent=Msa0067580;Name=Msa0067580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|532
chr1_2 exon 32587017 32588172 32587017 ID=Msa0067580-mRNA-1:exon:10662;Parent=Msa0067580-mRNA-1
chr1_2 exon 32588417 32588859 32588417 ID=Msa0067580-mRNA-1:exon:10663;Parent=Msa0067580-mRNA-1
chr1_2 CDS 32587017 32588172 32587017 ID=Msa0067580-mRNA-1:cds;Parent=Msa0067580-mRNA-1
chr1_2 CDS 32588417 32588859 32588417 ID=Msa0067580-mRNA-1:cds;Parent=Msa0067580-mRNA-1
Gene Sequence

>Msa0067580

ATGGTATTTTCAGGAAAGCAACATGGTTGGGAAAACACCAAAGGCTTCACCCTTCAAGTCCTAACAGGAAGGTGGTTTATGGTGTTTTCATCATTTATGATCATGTCAGTATCTGGAGCAAGCTACATGTTTGGCCTATACTCAAGAGAAATCAAATCAGTTTTGGGTTATGACCAATCCACTCTCACTCTCTTGAGCTTCTTCAAGGACTTGGGATCTAACATAGGCATTCTCTCAGGCTTACTCAATGAAATCACACCTCCTTGGGTTGTCTTAACAATTGGTGGTCTTCTCAACTTTTTTGGCTATTTCATGATTTGGCTTGCAGTAACAAGAAAAATCCCTAAACCTCCAGTATGGAATATGTGCTTATACATATTCATTGGAGCCAATTCTCATTGTTCAACCAACACTGGAGCTTTAGTCACTAGTGTAAAGAATTTCCCTGGTAGTAGAGGTGTTGTCATAGGCCTTTTGAGTGGTTATCTTGGTTTGAGTGGAGCTATCATCACTCAACTATACTATGCCTTCTACGGAAATGACTCCAAATCTTTAATTTTGCTTATGGCTTGGTTACCAACTGCTGTAACGTTTGTTTTTATGCCAGTTATTAAGCACCATAAGAGAGCTGAACAACCAAATGATTCCAAAGCTTTTTATAATTTCCTTTACATGTCTTTAATCCTTGCAGGGTTCCTCATGATAATGATCATAGTGCAAAACTGTTTCAACTTTACTAAGAGTGAGTATTATGTCACTTCCATTTTGATGCTTCTCTTGCTCATCCTCCCTTTTGTTGTTGTTATTATGGAAGAACAAAGGATTTGGAAGAACAAAAAAGAGCAAATCAATGTTGAAGATCCTCCTTCTAAGCCACAGACTCACCAATCTAGAGGAGAGACTACTCAAAATCAAAATCAAAATCAAAATCAGAATCAAAAGCAAGTTTCCTCTTCCCCAAGTAGAGGTGAAGATCATACAATATTTCAAGCCATTTTCAGCCTTGACATGATGACTCTTTTTGTAGCCACAATATGTGGACTTGGTGGAACTCTTACTGTGGTAAATAACTTGAGTCAAATTGGATTATCTTTAGGATATCCTGCACATAGTATAACCACATTTGTGTCCCTAATGGCAATTTGGATCTATCTAGCATCAATTATTGTTGGTTTCTGCTTTGGTGCAAATTGGCCAGTACTGTTTTCAATCATATCTGAACTCTTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATAGGGTCATACTTGTTAAGTGTTAGGGTTGCTGGTCATCTCTATGACAAAGAAGCCCTAAAGCAAATGGCAGCATTAGGGTTAAAGAGGAAGTCAGGGGAGGAGTTGAATTGCAATGGAAGTGAATGCTACAAATTGGCTTTCATTATAATCACTGCTGTTAGCCTCTTTGGGGCACTTGTGTCTCTAACTTTGGTGATAAGGACTAGAGAGTTTTATAAAAGTGACATATACAAAAAGTTCAGAGAGGAAGTTAGAAATAATGAAAATGAATTGGTTGTGACTCAGAACAAGGTTGGACCTGCCTCAAATGATGCATAG

Protein sequence

>Msa0067580

MVFSGKQHGWENTKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGSNIGILSGLLNEITPPWVVLTIGGLLNFFGYFMIWLAVTRKIPKPPVWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIITQLYYAFYGNDSKSLILLMAWLPTAVTFVFMPVIKHHKRAEQPNDSKAFYNFLYMSLILAGFLMIMIIVQNCFNFTKSEYYVTSILMLLLLILPFVVVIMEEQRIWKNKKEQINVEDPPSKPQTHQSRGETTQNQNQNQNQNQKQVSSSPSRGEDHTIFQAIFSLDMMTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFVSLMAIWIYLASIIVGFCFGANWPVLFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGHLYDKEALKQMAALGLKRKSGEELNCNGSECYKLAFIIITAVSLFGALVSLTLVIRTREFYKSDIYKKFREEVRNNENELVVTQNKVGPASNDA*