Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067580 | XP_003590250.1 | 86.387 | 595 | 17 | 4 | 1 | 531 | 1 | 595 | 0.0 | 966 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067580 | sp|F4I9E1|NFD4_ARATH | 24.638 | 552 | 325 | 16 | 18 | 500 | 34 | 563 | 5.28e-21 | 100 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067580 | G7I7D1 | 86.387 | 595 | 17 | 4 | 1 | 531 | 1 | 595 | 0.0 | 966 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004350 | Msa0067580 | 0.814184 | 1.753108e-51 | -8.615850e-47 |
Msa0006700 | Msa0067580 | 0.812515 | 4.077870e-51 | -8.615850e-47 |
Msa0007230 | Msa0067580 | 0.803506 | 3.375204e-49 | -8.615850e-47 |
Msa0008330 | Msa0067580 | 0.830751 | 2.462047e-55 | -8.615850e-47 |
Msa0012780 | Msa0067580 | -0.809056 | 2.284633e-50 | -8.615850e-47 |
Msa0014790 | Msa0067580 | 0.848537 | 5.754295e-60 | -8.615850e-47 |
Msa0021980 | Msa0067580 | 0.812376 | 4.372741e-51 | -8.615850e-47 |
Msa0026120 | Msa0067580 | 0.819371 | 1.202663e-52 | -8.615850e-47 |
Msa0026930 | Msa0067580 | 0.836993 | 6.757230e-57 | -8.615850e-47 |
Msa0036150 | Msa0067580 | 0.828376 | 9.305059e-55 | -8.615850e-47 |
Msa0050240 | Msa0067580 | 0.800292 | 1.543286e-48 | -8.615850e-47 |
Msa0051100 | Msa0067580 | 0.801722 | 7.875208e-49 | -8.615850e-47 |
Msa0053480 | Msa0067580 | 0.825268 | 5.141673e-54 | -8.615850e-47 |
Msa0055590 | Msa0067580 | 0.806812 | 6.857919e-50 | -8.615850e-47 |
Msa0055650 | Msa0067580 | 0.824749 | 6.818709e-54 | -8.615850e-47 |
Msa0056550 | Msa0067580 | 0.803902 | 2.792692e-49 | -8.615850e-47 |
Msa0059880 | Msa0067580 | -0.807005 | 6.242002e-50 | -8.615850e-47 |
Msa0062750 | Msa0067580 | 0.801321 | 9.512611e-49 | -8.615850e-47 |
Msa0063100 | Msa0067580 | 0.802537 | 5.353524e-49 | -8.615850e-47 |
Msa0067580 | Msa0070090 | 0.805502 | 1.294125e-49 | -8.615850e-47 |
Msa0067580 | Msa0074760 | 0.804528 | 2.068469e-49 | -8.615850e-47 |
Msa0067580 | Msa0074780 | 0.849388 | 3.338260e-60 | -8.615850e-47 |
Msa0067580 | Msa0078370 | 0.834352 | 3.150042e-56 | -8.615850e-47 |
Msa0067580 | Msa0101060 | 0.807812 | 4.209591e-50 | -8.615850e-47 |
Msa0067580 | Msa0101650 | 0.830504 | 2.829537e-55 | -8.615850e-47 |
Msa0067580 | Msa0106110 | -0.814635 | 1.393819e-51 | -8.615850e-47 |
Msa0067580 | Msa0112800 | 0.803895 | 2.802458e-49 | -8.615850e-47 |
Msa0067580 | Msa0117300 | 0.809713 | 1.651513e-50 | -8.615850e-47 |
Msa0067580 | Msa0126150 | 0.800830 | 1.199001e-48 | -8.615850e-47 |
Msa0067580 | Msa0127210 | 0.805075 | 1.590482e-49 | -8.615850e-47 |
Msa0067580 | Msa0151860 | 0.816845 | 4.481488e-52 | -8.615850e-47 |
Msa0067580 | Msa0151870 | 0.814568 | 1.441694e-51 | -8.615850e-47 |
Msa0067580 | Msa0152650 | -0.812259 | 4.639194e-51 | -8.615850e-47 |
Msa0067580 | Msa0153440 | 0.848536 | 5.759631e-60 | -8.615850e-47 |
Msa0067580 | Msa0164630 | 0.812141 | 4.921329e-51 | -8.615850e-47 |
Msa0067580 | Msa0166580 | 0.811984 | 5.326713e-51 | -8.615850e-47 |
Msa0067580 | Msa0169960 | 0.807731 | 4.379929e-50 | -8.615850e-47 |
Msa0067580 | Msa0180290 | 0.811521 | 6.717764e-51 | -8.615850e-47 |
Msa0067580 | Msa0213090 | 0.800277 | 1.554503e-48 | -8.615850e-47 |
Msa0067580 | Msa0216550 | 0.810525 | 1.103852e-50 | -8.615850e-47 |
Msa0067580 | Msa0218480 | 0.804062 | 2.587367e-49 | -8.615850e-47 |
Msa0067580 | Msa0218590 | 0.805851 | 1.093338e-49 | -8.615850e-47 |
Msa0067580 | Msa0227800 | 0.838723 | 2.426780e-57 | -8.615850e-47 |
Msa0067580 | Msa0232860 | 0.857736 | 1.331671e-62 | -8.615850e-47 |
Msa0067580 | Msa0241580 | 0.801035 | 1.088574e-48 | -8.615850e-47 |
Msa0067580 | Msa0251140 | 0.810254 | 1.263050e-50 | -8.615850e-47 |
Msa0067580 | Msa0254190 | 0.812144 | 4.914982e-51 | -8.615850e-47 |
Msa0067580 | Msa0260960 | 0.807457 | 5.007510e-50 | -8.615850e-47 |
Msa0067580 | Msa0260970 | 0.824641 | 7.231905e-54 | -8.615850e-47 |
Msa0067580 | Msa0264940 | -0.820473 | 6.735072e-53 | -8.615850e-47 |
Msa0067580 | Msa0266380 | 0.807352 | 5.271145e-50 | -8.615850e-47 |
Msa0067580 | Msa0272420 | 0.830593 | 2.691159e-55 | -8.615850e-47 |
Msa0067580 | Msa0279490 | 0.804447 | 2.151027e-49 | -8.615850e-47 |
Msa0067580 | Msa0290950 | 0.800739 | 1.251149e-48 | -8.615850e-47 |
Msa0067580 | Msa0295850 | 0.803866 | 2.840878e-49 | -8.615850e-47 |
Msa0067580 | Msa0296610 | 0.810672 | 1.026131e-50 | -8.615850e-47 |
Msa0067580 | Msa0301300 | 0.802008 | 6.879503e-49 | -8.615850e-47 |
Msa0067580 | Msa0302990 | -0.822661 | 2.102471e-53 | -8.615850e-47 |
Msa0067580 | Msa0304990 | 0.848863 | 4.672255e-60 | -8.615850e-47 |
Msa0067580 | Msa0312570 | 0.805292 | 1.432460e-49 | -8.615850e-47 |
Msa0067580 | Msa0323630 | 0.815618 | 8.429259e-52 | -8.615850e-47 |
Msa0067580 | Msa0330270 | 0.811093 | 8.318363e-51 | -8.615850e-47 |
Msa0067580 | Msa0330400 | 0.801993 | 6.928466e-49 | -8.615850e-47 |
Msa0067580 | Msa0350020 | 0.800444 | 1.436904e-48 | -8.615850e-47 |
Msa0067580 | Msa0351230 | 0.805532 | 1.275367e-49 | -8.615850e-47 |
Msa0067580 | Msa0358710 | 0.854967 | 8.649130e-62 | -8.615850e-47 |
Msa0067580 | Msa0359630 | 0.827032 | 1.957178e-54 | -8.615850e-47 |
Msa0067580 | Msa0360130 | 0.811487 | 6.830113e-51 | -8.615850e-47 |
Msa0067580 | Msa0363440 | 0.837181 | 6.049194e-57 | -8.615850e-47 |
Msa0067580 | Msa0365360 | 0.852507 | 4.412326e-61 | -8.615850e-47 |
Msa0067580 | Msa0371610 | 0.829361 | 5.375337e-55 | -8.615850e-47 |
Msa0067580 | Msa0389030 | 0.839813 | 1.265795e-57 | -8.615850e-47 |
Msa0067580 | Msa0389050 | 0.870403 | 1.498576e-66 | -8.615850e-47 |
Msa0067580 | Msa0389060 | 0.812775 | 3.578614e-51 | -8.615850e-47 |
Msa0067580 | Msa0404870 | 0.864632 | 1.057172e-64 | -8.615850e-47 |
Msa0067580 | Msa0406540 | 0.858476 | 8.023765e-63 | -8.615850e-47 |
Msa0067580 | Msa0409820 | 0.826673 | 2.384348e-54 | -8.615850e-47 |
Msa0067580 | Msa0410960 | 0.835830 | 1.335427e-56 | -8.615850e-47 |
Msa0067580 | Msa0411000 | 0.812403 | 4.314003e-51 | -8.615850e-47 |
Msa0067580 | Msa0411290 | 0.808756 | 2.649119e-50 | -8.615850e-47 |
Msa0067580 | Msa0413740 | 0.820392 | 7.026979e-53 | -8.615850e-47 |
Msa0067580 | Msa0420070 | 0.816028 | 6.829400e-52 | -8.615850e-47 |
Msa0067580 | Msa0423600 | 0.812903 | 3.354007e-51 | -8.615850e-47 |
Msa0067580 | Msa0439700 | 0.841002 | 6.187666e-58 | -8.615850e-47 |
Msa0067580 | Msa0440110 | 0.832724 | 8.027927e-56 | -8.615850e-47 |
Msa0067580 | Msa0451760 | 0.832138 | 1.121571e-55 | -8.615850e-47 |
Msa0067580 | Msa0452010 | 0.840566 | 8.051958e-58 | -8.615850e-47 |
Msa0067580 | Msa0452180 | 0.814107 | 1.823429e-51 | -8.615850e-47 |
Msa0067580 | Msa0452440 | 0.815965 | 7.052854e-52 | -8.615850e-47 |
Msa0067580 | Msa0452680 | 0.840502 | 8.367279e-58 | -8.615850e-47 |
Msa0067580 | Msa0455260 | 0.827745 | 1.320324e-54 | -8.615850e-47 |
Msa0067580 | Msa0457370 | 0.843892 | 1.059119e-58 | -8.615850e-47 |
Msa0067580 | Msa0470650 | 0.814669 | 1.369444e-51 | -8.615850e-47 |
Msa0067580 | Msa0481320 | 0.839763 | 1.304319e-57 | -8.615850e-47 |
Msa0067580 | Msa0482580 | 0.831390 | 1.715625e-55 | -8.615850e-47 |
Msa0067580 | Msa0499710 | 0.818391 | 2.009265e-52 | -8.615850e-47 |
Msa0067580 | Msa0503620 | 0.829042 | 6.422016e-55 | -8.615850e-47 |
Msa0067580 | Msa0505390 | 0.821371 | 4.184238e-53 | -8.615850e-47 |
Msa0067580 | Msa0509510 | 0.815090 | 1.104512e-51 | -8.615850e-47 |
Msa0067580 | Msa0530930 | 0.806231 | 9.094829e-50 | -8.615850e-47 |
Msa0067580 | Msa0535050 | 0.802547 | 5.326567e-49 | -8.615850e-47 |
Msa0067580 | Msa0543310 | 0.806005 | 1.014847e-49 | -8.615850e-47 |
Msa0067580 | Msa0544930 | 0.845756 | 3.330877e-59 | -8.615850e-47 |
Msa0067580 | Msa0563140 | 0.818171 | 2.252953e-52 | -8.615850e-47 |
Msa0067580 | Msa0575540 | 0.823228 | 1.551059e-53 | -8.615850e-47 |
Msa0067580 | Msa0581340 | 0.802917 | 4.467958e-49 | -8.615850e-47 |
Msa0067580 | Msa0589610 | 0.815378 | 9.535348e-52 | -8.615850e-47 |
Msa0067580 | Msa0591780 | 0.819863 | 9.286646e-53 | -8.615850e-47 |
Msa0067580 | Msa0598250 | 0.801025 | 1.094039e-48 | -8.615850e-47 |
Msa0067580 | Msa0599250 | 0.845944 | 2.960661e-59 | -8.615850e-47 |
Msa0067580 | Msa0607440 | 0.816080 | 6.649416e-52 | -8.615850e-47 |
Msa0067580 | Msa0617370 | 0.812339 | 4.456042e-51 | -8.615850e-47 |
Msa0067580 | Msa0618260 | 0.812517 | 4.073413e-51 | -8.615850e-47 |
Msa0067580 | Msa0620640 | 0.815606 | 8.481216e-52 | -8.615850e-47 |
Msa0067580 | Msa0629960 | 0.820608 | 6.269322e-53 | -8.615850e-47 |
Msa0067580 | Msa0630000 | 0.812611 | 3.885441e-51 | -8.615850e-47 |
Msa0067580 | Msa0632540 | 0.800332 | 1.514381e-48 | -8.615850e-47 |
Msa0067580 | Msa0632560 | 0.812567 | 3.973347e-51 | -8.615850e-47 |
Msa0067580 | Msa0635470 | 0.815797 | 7.689728e-52 | -8.615850e-47 |
Msa0067580 | Msa0639880 | 0.825944 | 3.555724e-54 | -8.615850e-47 |
Msa0067580 | Msa0641020 | 0.862647 | 4.368970e-64 | -8.615850e-47 |
Msa0067580 | Msa0641030 | 0.853408 | 2.437498e-61 | -8.615850e-47 |
Msa0067580 | Msa0645460 | 0.809555 | 1.785974e-50 | -8.615850e-47 |
Msa0067580 | Msa0646390 | 0.802796 | 4.731791e-49 | -8.615850e-47 |
Msa0067580 | Msa0648200 | 0.804324 | 2.281522e-49 | -8.615850e-47 |
Msa0067580 | Msa0648300 | 0.833229 | 6.012001e-56 | -8.615850e-47 |
Msa0067580 | Msa0657860 | 0.817236 | 3.661133e-52 | -8.615850e-47 |
Msa0067580 | Msa0678240 | 0.889527 | 2.236079e-73 | -8.615850e-47 |
Msa0067580 | Msa0679560 | 0.830772 | 2.432790e-55 | -8.615850e-47 |
Msa0067580 | Msa0685880 | 0.814324 | 1.632429e-51 | -8.615850e-47 |
Msa0067580 | Msa0691140 | 0.829020 | 6.503316e-55 | -8.615850e-47 |
Msa0067580 | Msa0691190 | 0.804926 | 1.708266e-49 | -8.615850e-47 |
Msa0067580 | Msa0692000 | 0.855355 | 6.671600e-62 | -8.615850e-47 |
Msa0067580 | Msa0708090 | 0.805700 | 1.176012e-49 | -8.615850e-47 |
Msa0067580 | Msa0714020 | 0.820210 | 7.737391e-53 | -8.615850e-47 |
Msa0067580 | Msa0714160 | 0.813519 | 2.456838e-51 | -8.615850e-47 |
Msa0067580 | Msa0733400 | 0.814017 | 1.908194e-51 | -8.615850e-47 |
Msa0067580 | Msa0739390 | 0.839114 | 1.922930e-57 | -8.615850e-47 |
Msa0067580 | Msa0739410 | 0.859739 | 3.358057e-63 | -8.615850e-47 |
Msa0067580 | Msa0752580 | 0.872858 | 2.302711e-67 | -8.615850e-47 |
Msa0067580 | Msa0754500 | 0.860922 | 1.472849e-63 | -8.615850e-47 |
Msa0067580 | Msa0756410 | 0.832307 | 1.018485e-55 | -8.615850e-47 |
Msa0067580 | Msa0756480 | 0.835162 | 1.970112e-56 | -8.615850e-47 |
Msa0067580 | Msa0763280 | 0.810665 | 1.029683e-50 | -8.615850e-47 |
Msa0067580 | Msa0772150 | 0.813119 | 3.006864e-51 | -8.615850e-47 |
Msa0067580 | Msa0775580 | 0.812078 | 5.079055e-51 | -8.615850e-47 |
Msa0067580 | Msa0778580 | 0.809811 | 1.573324e-50 | -8.615850e-47 |
Msa0067580 | Msa0782090 | 0.817515 | 3.168890e-52 | -8.615850e-47 |
Msa0067580 | Msa0784710 | 0.818733 | 1.680406e-52 | -8.615850e-47 |
Msa0067580 | Msa0792510 | 0.810821 | 9.527521e-51 | -8.615850e-47 |
Msa0067580 | Msa0811000 | 0.806935 | 6.459003e-50 | -8.615850e-47 |
Msa0067580 | Msa0811940 | 0.814360 | 1.602879e-51 | -8.615850e-47 |
Msa0067580 | Msa0813030 | 0.803123 | 4.049920e-49 | -8.615850e-47 |
Msa0067580 | Msa0819740 | 0.867308 | 1.506217e-65 | -8.615850e-47 |
Msa0067580 | Msa0830120 | 0.807496 | 4.913401e-50 | -8.615850e-47 |
Msa0067580 | Msa0830450 | 0.805103 | 1.569277e-49 | -8.615850e-47 |
Msa0067580 | Msa0830900 | 0.855675 | 5.380421e-62 | -8.615850e-47 |
Msa0067580 | Msa0835510 | 0.828516 | 8.608214e-55 | -8.615850e-47 |
Msa0067580 | Msa0839480 | 0.806633 | 7.483804e-50 | -8.615850e-47 |
Msa0067580 | Msa0853500 | 0.819502 | 1.123139e-52 | -8.615850e-47 |
Msa0067580 | Msa0853570 | 0.803532 | 3.333315e-49 | -8.615850e-47 |
Msa0067580 | Msa0857080 | 0.803411 | 3.531999e-49 | -8.615850e-47 |
Msa0067580 | Msa0860060 | 0.807747 | 4.346667e-50 | -8.615850e-47 |
Msa0067580 | Msa0862020 | 0.812475 | 4.161598e-51 | -8.615850e-47 |
Msa0067580 | Msa0867810 | 0.817984 | 2.483848e-52 | -8.615850e-47 |
Msa0067580 | Msa0883350 | 0.801174 | 1.019611e-48 | -8.615850e-47 |
Msa0067580 | Msa0883390 | 0.829583 | 4.746397e-55 | -8.615850e-47 |
Msa0067580 | Msa0883410 | 0.824835 | 6.506782e-54 | -8.615850e-47 |
Msa0067580 | Msa0883450 | 0.803715 | 3.054362e-49 | -8.615850e-47 |
Msa0067580 | Msa0883660 | 0.831162 | 1.952141e-55 | -8.615850e-47 |
Msa0067580 | Msa0883670 | 0.813751 | 2.184644e-51 | -8.615850e-47 |
Msa0067580 | Msa0885020 | 0.806751 | 7.064163e-50 | -8.615850e-47 |
Msa0067580 | Msa0885200 | 0.805881 | 1.077646e-49 | -8.615850e-47 |
Msa0067580 | Msa0885220 | 0.826569 | 2.524731e-54 | -8.615850e-47 |
Msa0067580 | Msa0885320 | 0.809242 | 2.084632e-50 | -8.615850e-47 |
Msa0067580 | Msa0886660 | 0.813176 | 2.922757e-51 | -8.615850e-47 |
Msa0067580 | Msa0887000 | 0.833075 | 6.567788e-56 | -8.615850e-47 |
Msa0067580 | Msa0903730 | 0.801593 | 8.367607e-49 | -8.615850e-47 |
Msa0067580 | Msa0911910 | 0.802807 | 4.708357e-49 | -8.615850e-47 |
Msa0067580 | Msa0912160 | 0.808754 | 2.651849e-50 | -8.615850e-47 |
Msa0067580 | Msa0912200 | 0.800178 | 1.627611e-48 | -8.615850e-47 |
Msa0067580 | Msa0912220 | 0.810176 | 1.313016e-50 | -8.615850e-47 |
Msa0067580 | Msa0912230 | 0.810552 | 1.089235e-50 | -8.615850e-47 |
Msa0067580 | Msa0912410 | 0.804935 | 1.701125e-49 | -8.615850e-47 |
Msa0067580 | Msa0912470 | 0.808919 | 2.444798e-50 | -8.615850e-47 |
Msa0067580 | Msa0919490 | 0.821695 | 3.522330e-53 | -8.615850e-47 |
Msa0067580 | Msa0951720 | 0.827822 | 1.265131e-54 | -8.615850e-47 |
Msa0067580 | Msa0957800 | 0.829536 | 4.873210e-55 | -8.615850e-47 |
Msa0067580 | Msa0973130 | 0.804843 | 1.778317e-49 | -8.615850e-47 |
Msa0067580 | Msa0973230 | 0.814140 | 1.792986e-51 | -8.615850e-47 |
Msa0067580 | Msa0981730 | 0.800590 | 1.341855e-48 | -8.615850e-47 |
Msa0067580 | Msa0984830 | 0.842780 | 2.097558e-58 | -8.615850e-47 |
Msa0067580 | Msa0984840 | 0.827081 | 1.904831e-54 | -8.615850e-47 |
Msa0067580 | Msa0985430 | 0.815193 | 1.047726e-51 | -8.615850e-47 |
Msa0067580 | Msa0986870 | 0.847203 | 1.341222e-59 | -8.615850e-47 |
Msa0067580 | Msa0987860 | 0.818940 | 1.508184e-52 | -8.615850e-47 |
Msa0067580 | Msa0988500 | 0.803943 | 2.738209e-49 | -8.615850e-47 |
Msa0067580 | Msa1006290 | 0.808750 | 2.656842e-50 | -8.615850e-47 |
Msa0067580 | Msa1008340 | 0.829970 | 3.819599e-55 | -8.615850e-47 |
Msa0067580 | Msa1008960 | 0.807082 | 6.012519e-50 | -8.615850e-47 |
Msa0067580 | Msa1009150 | 0.822571 | 2.206374e-53 | -8.615850e-47 |
Msa0067580 | Msa1009170 | 0.848715 | 5.135465e-60 | -8.615850e-47 |
Msa0067580 | Msa1009220 | 0.800834 | 1.196543e-48 | -8.615850e-47 |
Msa0067580 | Msa1018720 | 0.803730 | 3.032229e-49 | -8.615850e-47 |
Msa0067580 | Msa1026720 | 0.802582 | 5.238270e-49 | -8.615850e-47 |
Msa0067580 | Msa1032350 | 0.820203 | 7.763051e-53 | -8.615850e-47 |
Msa0067580 | Msa1033670 | 0.835662 | 1.472523e-56 | -8.615850e-47 |
Msa0067580 | Msa1036360 | 0.807463 | 4.993680e-50 | -8.615850e-47 |
Msa0067580 | Msa1041550 | 0.806654 | 7.406803e-50 | -8.615850e-47 |
Msa0067580 | Msa1044040 | 0.812306 | 4.531135e-51 | -8.615850e-47 |
Msa0067580 | Msa1049950 | 0.833716 | 4.544461e-56 | -8.615850e-47 |
Msa0067580 | Msa1052070 | 0.804658 | 1.943402e-49 | -8.615850e-47 |
Msa0067580 | Msa1052080 | 0.820887 | 5.408072e-53 | -8.615850e-47 |
Msa0067580 | Msa1056530 | 0.807497 | 4.912179e-50 | -8.615850e-47 |
Msa0067580 | Msa1072350 | 0.818940 | 1.507664e-52 | -8.615850e-47 |
Msa0067580 | Msa1073500 | 0.841391 | 4.890093e-58 | -8.615850e-47 |
Msa0067580 | Msa1076640 | 0.807560 | 4.761333e-50 | -8.615850e-47 |
Msa0067580 | Msa1080470 | 0.802070 | 6.677618e-49 | -8.615850e-47 |
Msa0067580 | Msa1081530 | 0.836953 | 6.916914e-57 | -8.615850e-47 |
Msa0067580 | Msa1081600 | 0.815505 | 8.934514e-52 | -8.615850e-47 |
Msa0067580 | Msa1081700 | 0.830484 | 2.861235e-55 | -8.615850e-47 |
Msa0067580 | Msa1092660 | 0.808553 | 2.926651e-50 | -8.615850e-47 |
Msa0067580 | Msa1098350 | 0.819213 | 1.306589e-52 | -8.615850e-47 |
Msa0067580 | Msa1105850 | 0.815452 | 9.176423e-52 | -8.615850e-47 |
Msa0067580 | Msa1109890 | -0.801609 | 8.307382e-49 | -8.615850e-47 |
Msa0067580 | Msa1113210 | 0.809269 | 2.056976e-50 | -8.615850e-47 |
Msa0067580 | Msa1118140 | 0.800815 | 1.207113e-48 | -8.615850e-47 |
Msa0067580 | Msa1135660 | 0.841372 | 4.946951e-58 | -8.615850e-47 |
Msa0067580 | Msa1138450 | 0.853054 | 3.079520e-61 | -8.615850e-47 |
Msa0067580 | Msa1138480 | 0.863074 | 3.225751e-64 | -8.615850e-47 |
Msa0067580 | Msa1138490 | 0.838714 | 2.440531e-57 | -8.615850e-47 |
Msa0067580 | Msa1139240 | 0.844794 | 6.061628e-59 | -8.615850e-47 |
Msa0067580 | Msa1140460 | 0.840008 | 1.125751e-57 | -8.615850e-47 |
Msa0067580 | Msa1166370 | 0.827529 | 1.487899e-54 | -8.615850e-47 |
Msa0067580 | Msa1182780 | 0.877598 | 5.526672e-69 | -8.615850e-47 |
Msa0067580 | Msa1182830 | 0.810147 | 1.331669e-50 | -8.615850e-47 |
Msa0067580 | Msa1191390 | 0.802359 | 5.825465e-49 | -8.615850e-47 |
Msa0067580 | Msa1199750 | 0.826857 | 2.154954e-54 | -8.615850e-47 |
Msa0067580 | Msa1201990 | 0.809363 | 1.963401e-50 | -8.615850e-47 |
Msa0067580 | Msa1204430 | 0.820467 | 6.754223e-53 | -8.615850e-47 |
Msa0067580 | Msa1204660 | 0.804365 | 2.237455e-49 | -8.615850e-47 |
Msa0067580 | Msa1207480 | -0.809135 | 2.198006e-50 | -8.615850e-47 |
Msa0067580 | Msa1208250 | 0.831869 | 1.307167e-55 | -8.615850e-47 |
Msa0067580 | Msa1211280 | 0.803189 | 3.926240e-49 | -8.615850e-47 |
Msa0067580 | Msa1211370 | 0.823752 | 1.169238e-53 | -8.615850e-47 |
Msa0067580 | Msa1212740 | 0.827133 | 1.851495e-54 | -8.615850e-47 |
Msa0067580 | Msa1221260 | 0.803346 | 3.642196e-49 | -8.615850e-47 |
Msa0067580 | Msa1230190 | 0.803508 | 3.371125e-49 | -8.615850e-47 |
Msa0067580 | Msa1232330 | 0.861471 | 1.002684e-63 | -8.615850e-47 |
Msa0067580 | Msa1233650 | -0.804119 | 2.517199e-49 | -8.615850e-47 |
Msa0067580 | Msa1238130 | 0.847900 | 8.630800e-60 | -8.615850e-47 |
Msa0067580 | Msa1243130 | 0.802310 | 5.959920e-49 | -8.615850e-47 |
Msa0067580 | Msa1258280 | 0.802934 | 4.432608e-49 | -8.615850e-47 |
Msa0067580 | Msa1272130 | 0.813652 | 2.296857e-51 | -8.615850e-47 |
Msa0067580 | Msa1275340 | 0.866414 | 2.901409e-65 | -8.615850e-47 |
Msa0067580 | Msa1279310 | 0.823488 | 1.348434e-53 | -8.615850e-47 |
Msa0067580 | Msa1279850 | 0.800758 | 1.240390e-48 | -8.615850e-47 |
Msa0067580 | Msa1279860 | 0.867030 | 1.847124e-65 | -8.615850e-47 |
Msa0067580 | Msa1279870 | 0.854211 | 1.431455e-61 | -8.615850e-47 |
Msa0067580 | Msa1285830 | 0.818309 | 2.096647e-52 | -8.615850e-47 |
Msa0067580 | Msa1287160 | 0.865177 | 7.136136e-65 | -8.615850e-47 |
Msa0067580 | Msa1287340 | 0.848064 | 7.776043e-60 | -8.615850e-47 |
Msa0067580 | Msa1287690 | 0.810410 | 1.168743e-50 | -8.615850e-47 |
Msa0067580 | Msa1287700 | 0.807150 | 5.816594e-50 | -8.615850e-47 |
Msa0067580 | Msa1289500 | 0.821721 | 3.472246e-53 | -8.615850e-47 |
Msa0067580 | Msa1295010 | 0.807397 | 5.155568e-50 | -8.615850e-47 |
Msa0067580 | Msa1296650 | 0.806191 | 9.272697e-50 | -8.615850e-47 |
Msa0067580 | Msa1298290 | 0.819464 | 1.145669e-52 | -8.615850e-47 |
Msa0067580 | Msa1302160 | 0.802106 | 6.567240e-49 | -8.615850e-47 |
Msa0067580 | Msa1304850 | 0.810537 | 1.097378e-50 | -8.615850e-47 |
Msa0067580 | Msa1311150 | 0.804534 | 2.063340e-49 | -8.615850e-47 |
Msa0067580 | Msa1311550 | 0.853467 | 2.344297e-61 | -8.615850e-47 |
Msa0067580 | Msa1317710 | 0.814432 | 1.545612e-51 | -8.615850e-47 |
Msa0067580 | Msa1328600 | 0.839791 | 1.282625e-57 | -8.615850e-47 |
Msa0067580 | Msa1329990 | 0.820142 | 8.016853e-53 | -8.615850e-47 |
Msa0067580 | Msa1331730 | 0.802661 | 5.046527e-49 | -8.615850e-47 |
Msa0067580 | Msa1333430 | 0.800798 | 1.216853e-48 | -8.615850e-47 |
Msa0067580 | Msa1340880 | 0.823977 | 1.035876e-53 | -8.615850e-47 |
Msa0067580 | Msa1343340 | 0.823316 | 1.479345e-53 | -8.615850e-47 |
Msa0067580 | Msa1355260 | 0.826984 | 2.009622e-54 | -8.615850e-47 |
Msa0067580 | Msa1357380 | 0.834858 | 2.350851e-56 | -8.615850e-47 |
Msa0067580 | Msa1357720 | 0.827633 | 1.404759e-54 | -8.615850e-47 |
Msa0067580 | Msa1366700 | 0.806078 | 9.795370e-50 | -8.615850e-47 |
Msa0067580 | Msa1373950 | 0.820895 | 5.387200e-53 | -8.615850e-47 |
Msa0067580 | Msa1379070 | 0.800263 | 1.564323e-48 | -8.615850e-47 |
Msa0067580 | Msa1379090 | 0.806370 | 8.502022e-50 | -8.615850e-47 |
Msa0067580 | Msa1386020 | 0.832767 | 7.831456e-56 | -8.615850e-47 |
Msa0067580 | Msa1388230 | 0.816591 | 5.111233e-52 | -8.615850e-47 |
Msa0067580 | Msa1397540 | 0.811491 | 6.817230e-51 | -8.615850e-47 |
Msa0067580 | Msa1405400 | 0.821589 | 3.725069e-53 | -8.615850e-47 |
Msa0067580 | Msa1405470 | 0.813275 | 2.780199e-51 | -8.615850e-47 |
Msa0067580 | Msa1405650 | 0.809741 | 1.628950e-50 | -8.615850e-47 |
Msa0067580 | Msa1426750 | 0.805541 | 1.269989e-49 | -8.615850e-47 |
Msa0067580 | Msa1432250 | 0.803216 | 3.875901e-49 | -8.615850e-47 |
Msa0067580 | Msa1437650 | 0.800431 | 1.445837e-48 | -8.615850e-47 |
Msa0067580 | Msa1445250 | 0.864436 | 1.217904e-64 | -8.615850e-47 |
Msa0067580 | Msa1445970 | 0.802829 | 4.659410e-49 | -8.615850e-47 |
Msa0067580 | Msa1450420 | 0.810286 | 1.243016e-50 | -8.615850e-47 |
Msa0067580 | Msa1457020 | 0.821476 | 3.957560e-53 | -8.615850e-47 |
Msa0067580 | Msa1457070 | 0.872582 | 2.846779e-67 | -8.615850e-47 |
Msa0067580 | Msa1459170 | 0.807660 | 4.534444e-50 | -8.615850e-47 |
Msa0067580 | Msa1460310 | -0.822528 | 2.257622e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067580 | MtrunA17_Chr1g0171591 | 86.387 | 595 | 17 | 4 | 1 | 531 | 1 | 595 | 0.0 | 966 |
Msa0067580 | MtrunA17_Chr1g0174101 | 78.535 | 587 | 71 | 2 | 1 | 532 | 1 | 587 | 0.0 | 893 |
Msa0067580 | MtrunA17_Chr1g0210274 | 53.596 | 584 | 211 | 4 | 8 | 532 | 10 | 592 | 0.0 | 626 |
Msa0067580 | MtrunA17_Chr1g0210284 | 53.448 | 580 | 207 | 5 | 8 | 531 | 10 | 582 | 0.0 | 620 |
Msa0067580 | MtrunA17_Chr1g0210291 | 53.859 | 583 | 202 | 6 | 12 | 532 | 13 | 590 | 0.0 | 607 |
Msa0067580 | MtrunA17_Chr7g0264861 | 51.520 | 592 | 223 | 5 | 4 | 531 | 9 | 600 | 0.0 | 582 |
Msa0067580 | MtrunA17_Chr2g0330551 | 31.664 | 559 | 294 | 6 | 21 | 512 | 4 | 541 | 1.98e-90 | 287 |
Msa0067580 | MtrunA17_Chr5g0442481 | 32.657 | 542 | 290 | 6 | 24 | 509 | 11 | 533 | 2.99e-87 | 279 |
Msa0067580 | MtrunA17_Chr7g0225191 | 31.724 | 580 | 300 | 11 | 24 | 512 | 15 | 589 | 4.33e-82 | 267 |
Msa0067580 | MtrunA17_Chr3g0132161 | 31.193 | 545 | 302 | 9 | 24 | 500 | 15 | 554 | 1.49e-80 | 262 |
Msa0067580 | MtrunA17_Chr4g0037301 | 31.835 | 534 | 293 | 7 | 24 | 500 | 15 | 534 | 1.07e-71 | 238 |
Msa0067580 | MtrunA17_Chr2g0304561 | 28.832 | 548 | 311 | 9 | 25 | 500 | 13 | 553 | 4.98e-67 | 226 |
Msa0067580 | MtrunA17_Chr5g0405621 | 28.237 | 556 | 306 | 11 | 24 | 519 | 13 | 535 | 4.11e-66 | 223 |
Msa0067580 | MtrunA17_Chr4g0064981 | 28.440 | 545 | 296 | 13 | 39 | 500 | 26 | 559 | 4.50e-63 | 216 |
Msa0067580 | MtrunA17_Chr3g0106801 | 25.564 | 532 | 326 | 11 | 21 | 502 | 4 | 515 | 3.54e-31 | 126 |
Msa0067580 | MtrunA17_Chr7g0251871 | 25.000 | 572 | 331 | 15 | 24 | 514 | 7 | 561 | 4.76e-26 | 112 |
Msa0067580 | MtrunA17_Chr2g0333371 | 29.185 | 233 | 123 | 5 | 286 | 500 | 81 | 289 | 3.41e-25 | 105 |
Msa0067580 | MtrunA17_Chr3g0106821 | 25.138 | 362 | 244 | 6 | 22 | 371 | 5 | 351 | 3.08e-24 | 104 |
Msa0067580 | MtrunA17_Chr5g0408921 | 23.993 | 571 | 336 | 17 | 24 | 508 | 7 | 565 | 8.66e-20 | 92.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067580 | AT2G39210.1 | 55.018 | 558 | 188 | 4 | 14 | 510 | 11 | 566 | 0.0 | 625 |
Msa0067580 | AT2G28120.1 | 52.281 | 570 | 217 | 3 | 9 | 524 | 2 | 570 | 0.0 | 588 |
Msa0067580 | AT1G74780.1 | 34.291 | 557 | 278 | 8 | 18 | 510 | 1 | 533 | 1.95e-100 | 313 |
Msa0067580 | AT2G34350.1 | 32.413 | 543 | 280 | 8 | 24 | 506 | 7 | 522 | 4.07e-88 | 281 |
Msa0067580 | AT2G34350.2 | 32.413 | 543 | 280 | 8 | 24 | 506 | 7 | 522 | 4.07e-88 | 281 |
Msa0067580 | AT1G18940.1 | 32.909 | 550 | 275 | 8 | 19 | 506 | 4 | 521 | 1.19e-86 | 277 |
Msa0067580 | AT5G50630.1 | 31.818 | 528 | 295 | 9 | 24 | 499 | 16 | 530 | 1.39e-85 | 275 |
Msa0067580 | AT5G50520.1 | 31.818 | 528 | 295 | 9 | 24 | 499 | 16 | 530 | 1.39e-85 | 275 |
Msa0067580 | AT2G34355.1 | 31.444 | 547 | 290 | 8 | 18 | 506 | 1 | 520 | 3.28e-83 | 268 |
Msa0067580 | AT5G14120.1 | 31.579 | 570 | 298 | 12 | 24 | 508 | 16 | 578 | 4.75e-81 | 264 |
Msa0067580 | AT3G01930.2 | 29.542 | 589 | 312 | 10 | 11 | 508 | 7 | 583 | 1.01e-76 | 253 |
Msa0067580 | AT2G16660.1 | 31.144 | 533 | 295 | 7 | 24 | 500 | 14 | 530 | 1.69e-71 | 238 |
Msa0067580 | AT4G34950.1 | 31.359 | 574 | 286 | 14 | 24 | 513 | 16 | 565 | 3.09e-71 | 238 |
Msa0067580 | AT1G80530.1 | 28.037 | 535 | 298 | 12 | 38 | 501 | 27 | 545 | 4.35e-60 | 208 |
Msa0067580 | AT3G01930.3 | 30.824 | 425 | 242 | 7 | 11 | 392 | 7 | 422 | 2.58e-57 | 197 |
Msa0067580 | AT2G16660.2 | 33.245 | 376 | 236 | 5 | 24 | 391 | 14 | 382 | 2.91e-52 | 182 |
Msa0067580 | AT3G01930.1 | 27.197 | 478 | 249 | 9 | 122 | 508 | 1 | 470 | 6.24e-48 | 173 |
Msa0067580 | AT2G34355.2 | 29.040 | 396 | 204 | 7 | 161 | 506 | 2 | 370 | 1.40e-47 | 170 |
Msa0067580 | AT3G01630.1 | 23.303 | 545 | 327 | 13 | 24 | 500 | 23 | 544 | 1.69e-25 | 110 |
Msa0067580 | AT3G01630.2 | 23.346 | 544 | 326 | 13 | 24 | 499 | 41 | 561 | 1.73e-25 | 110 |
Msa0067580 | AT4G19450.1 | 23.966 | 580 | 336 | 16 | 24 | 516 | 7 | 568 | 7.12e-25 | 108 |
Msa0067580 | AT1G31470.1 | 24.638 | 552 | 325 | 16 | 18 | 500 | 34 | 563 | 5.36e-22 | 100 |
Msa0067580 | AT4G19450.2 | 23.457 | 405 | 265 | 10 | 24 | 389 | 7 | 405 | 5.45e-21 | 95.9 |
Msa0067580 | AT5G45275.1 | 30.570 | 193 | 132 | 2 | 24 | 215 | 7 | 198 | 3.21e-18 | 88.2 |
Msa0067580 | AT2G30300.1 | 25.547 | 274 | 166 | 6 | 25 | 287 | 8 | 254 | 2.82e-14 | 75.9 |
Find 121 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACTGCTGTTAGCCTCTT+TGG | 0.157307 | 1_2:+32588689 | Msa0067580:CDS |
CTAATGCTGCCATTTGCTTT+AGG | 0.212154 | 1_2:-32588595 | None:intergenic |
AAGAGAAATCAAATCAGTTT+TGG | 0.212226 | 1_2:+32587160 | Msa0067580:CDS |
TAATGCTGCCATTTGCTTTA+GGG | 0.225798 | 1_2:-32588594 | None:intergenic |
GTAAATAACTTGAGTCAAAT+TGG | 0.246330 | 1_2:+32588079 | Msa0067580:CDS |
CCTAACAGGAAGGTGGTTTA+TGG | 0.247342 | 1_2:+32587076 | Msa0067580:CDS |
TACATGTCTTTAATCCTTGC+AGG | 0.247805 | 1_2:+32587686 | Msa0067580:CDS |
ATATTCCATACTGGAGGTTT+AGG | 0.248049 | 1_2:-32587359 | None:intergenic |
CTTGAGCTTCTTCAAGGACT+TGG | 0.257995 | 1_2:+32587208 | Msa0067580:CDS |
AGTCAAATTGGATTATCTTT+AGG | 0.269385 | 1_2:+32588091 | Msa0067580:CDS |
GGTCATACTTGTTAAGTGTT+AGG | 0.272102 | 1_2:+32588543 | Msa0067580:CDS |
TTGTGTCCCTAATGGCAATT+TGG | 0.273307 | 1_2:+32588140 | Msa0067580:CDS |
TTGTTAAGTGTTAGGGTTGC+TGG | 0.279418 | 1_2:+32588551 | Msa0067580:CDS |
TCACTGCTGTTAGCCTCTTT+GGG | 0.282953 | 1_2:+32588690 | Msa0067580:CDS |
TTGGTTGTTCAGCTCTCTTA+TGG | 0.310124 | 1_2:-32587634 | None:intergenic |
CACTCTCTTGAGCTTCTTCA+AGG | 0.315653 | 1_2:+32587202 | Msa0067580:CDS |
TCAATCATATCTGAACTCTT+TGG | 0.323733 | 1_2:+32588467 | Msa0067580:CDS |
GTTTCTGCTTTGGTGCAAAT+TGG | 0.326521 | 1_2:+32588432 | Msa0067580:CDS |
CATAAGCAAAATTAAAGATT+TGG | 0.327529 | 1_2:-32587561 | None:intergenic |
TTTGGAGTCATTTCCGTAGA+AGG | 0.334766 | 1_2:-32587543 | None:intergenic |
ATTATTGTTGGTTTCTGCTT+TGG | 0.335466 | 1_2:+32588422 | Msa0067580:CDS |
CTAAAGCAAATGGCAGCATT+AGG | 0.335582 | 1_2:+32588596 | Msa0067580:CDS |
CATCATGTCAAGGCTGAAAA+TGG | 0.337307 | 1_2:-32588008 | None:intergenic |
TATTCCATACTGGAGGTTTA+GGG | 0.337312 | 1_2:-32587358 | None:intergenic |
GTCATACTTGTTAAGTGTTA+GGG | 0.342527 | 1_2:+32588544 | Msa0067580:CDS |
CCTTGGGTTGTCTTAACAAT+TGG | 0.343987 | 1_2:+32587278 | Msa0067580:CDS |
TAGAAATAATGAAAATGAAT+TGG | 0.345482 | 1_2:+32588793 | Msa0067580:CDS |
TTTATGATCATGTCAGTATC+TGG | 0.347170 | 1_2:+32587110 | Msa0067580:CDS |
GATAGATCCAAATTGCCATT+AGG | 0.350724 | 1_2:-32588147 | None:intergenic |
CTCTTATGGTGCTTAATAAC+TGG | 0.351299 | 1_2:-32587620 | None:intergenic |
TTATGGAAGAACAAAGGATT+TGG | 0.359352 | 1_2:+32587822 | Msa0067580:CDS |
TGGAAGTGAATGCTACAAAT+TGG | 0.367640 | 1_2:+32588655 | Msa0067580:CDS |
TGGTGAGTCTGTGGCTTAGA+AGG | 0.373922 | 1_2:-32587881 | None:intergenic |
TCCATAATAACAACAACAAA+AGG | 0.377086 | 1_2:-32587806 | None:intergenic |
TTCAGGAAAGCAACATGGTT+GGG | 0.379726 | 1_2:+32587025 | Msa0067580:CDS |
GGCACTTGTGTCTCTAACTT+TGG | 0.384215 | 1_2:+32588712 | Msa0067580:CDS |
GGGTCAATAGCAAGTCCAAT+AGG | 0.385410 | 1_2:+32588521 | Msa0067580:CDS |
GAGCAAGAGAAGCATCAAAA+TGG | 0.387481 | 1_2:-32587777 | None:intergenic |
TGTCTCTAACTTTGGTGATA+AGG | 0.389302 | 1_2:+32588720 | Msa0067580:CDS |
ATAGATCCAAATTGCCATTA+GGG | 0.390342 | 1_2:-32588146 | None:intergenic |
CCATAAACCACCTTCCTGTT+AGG | 0.391547 | 1_2:-32587076 | None:intergenic |
TTAGGGTTAAAGAGGAAGTC+AGG | 0.397274 | 1_2:+32588614 | Msa0067580:CDS |
TGGGTTGTCTTAACAATTGG+TGG | 0.401882 | 1_2:+32587281 | Msa0067580:CDS |
TTCACCCTTCAAGTCCTAAC+AGG | 0.407883 | 1_2:+32587062 | Msa0067580:CDS |
ATTTGATTTCTCTTGAGTAT+AGG | 0.408543 | 1_2:-32587151 | None:intergenic |
CTTAACAAGTATGACCCTAT+TGG | 0.415970 | 1_2:-32588536 | None:intergenic |
TATGTAGCATCAATTATTGT+TGG | 0.419267 | 1_2:+32588410 | Msa0067580:intron |
ACCTTCCTGTTAGGACTTGA+AGG | 0.420046 | 1_2:-32587067 | None:intergenic |
AAATCCCTAAACCTCCAGTA+TGG | 0.420351 | 1_2:+32587354 | Msa0067580:CDS |
GTATGATCTTCACCTCTACT+TGG | 0.422261 | 1_2:-32587974 | None:intergenic |
CAATGAAATCACACCTCCTT+GGG | 0.429265 | 1_2:+32587262 | Msa0067580:CDS |
ATGGCAATTTGGATCTATCT+AGG | 0.429608 | 1_2:+32588151 | Msa0067580:CDS |
ATGTGCTTATACATATTCAT+TGG | 0.430843 | 1_2:+32587380 | Msa0067580:CDS |
TACTCAACATTGTACAATGT+TGG | 0.432900 | 1_2:+32588500 | Msa0067580:CDS |
GAGTAGTCTCTCCTCTAGAT+TGG | 0.434002 | 1_2:-32587901 | None:intergenic |
TTGAGCTTCTTCAAGGACTT+GGG | 0.443522 | 1_2:+32587209 | Msa0067580:CDS |
ACTCAACATTGTACAATGTT+GGG | 0.445413 | 1_2:+32588501 | Msa0067580:CDS |
TCAATGAAATCACACCTCCT+TGG | 0.458468 | 1_2:+32587261 | Msa0067580:CDS |
GGTAGTAGAGGTGTTGTCAT+AGG | 0.459692 | 1_2:+32587464 | Msa0067580:CDS |
TATAAGCACATATTCCATAC+TGG | 0.466541 | 1_2:-32587368 | None:intergenic |
TAAAGCAAATGGCAGCATTA+GGG | 0.468002 | 1_2:+32588597 | Msa0067580:CDS |
GTTGGTTGAACAATGAGAAT+TGG | 0.470515 | 1_2:-32587405 | None:intergenic |
TCTGGAGCAAGCTACATGTT+TGG | 0.475218 | 1_2:+32587128 | Msa0067580:CDS |
TATGATCTTCACCTCTACTT+GGG | 0.477700 | 1_2:-32587973 | None:intergenic |
GACTTGAAGGGTGAAGCCTT+TGG | 0.479566 | 1_2:-32587054 | None:intergenic |
AACCACATTTGTGTCCCTAA+TGG | 0.479854 | 1_2:+32588132 | Msa0067580:CDS |
TTCACCTCTACTTGGGGAAG+AGG | 0.481674 | 1_2:-32587966 | None:intergenic |
CAAAGAAGCCCTAAAGCAAA+TGG | 0.484783 | 1_2:+32588586 | Msa0067580:CDS |
CAACTATACTATGCCTTCTA+CGG | 0.492798 | 1_2:+32587530 | Msa0067580:CDS |
ATCTGTCTATGCATCATTTG+AGG | 0.496384 | 1_2:-32588843 | None:intergenic |
ACATGTCTTTAATCCTTGCA+GGG | 0.496948 | 1_2:+32587687 | Msa0067580:CDS |
CACTGCTGTTAGCCTCTTTG+GGG | 0.499507 | 1_2:+32588691 | Msa0067580:CDS |
CAAGGATTAAAGACATGTAA+AGG | 0.512316 | 1_2:-32587682 | None:intergenic |
TGGCAGCATTAGGGTTAAAG+AGG | 0.518733 | 1_2:+32588606 | Msa0067580:CDS |
GTCTATGCATCATTTGAGGC+AGG | 0.522205 | 1_2:-32588839 | None:intergenic |
AGTGGTTATCTTGGTTTGAG+TGG | 0.525713 | 1_2:+32587494 | Msa0067580:CDS |
GATATGATTGAAAACAGTAC+TGG | 0.531783 | 1_2:-32588455 | None:intergenic |
AACCAAGATAACCACTCAAA+AGG | 0.532585 | 1_2:-32587487 | None:intergenic |
TTTCAGGAAAGCAACATGGT+TGG | 0.541179 | 1_2:+32587024 | Msa0067580:CDS |
CCTCTAGATTGGTGAGTCTG+TGG | 0.548972 | 1_2:-32587890 | None:intergenic |
TAGGGTTAAAGAGGAAGTCA+GGG | 0.549788 | 1_2:+32588615 | Msa0067580:CDS |
GTAGCCACAATATGTGGACT+TGG | 0.551117 | 1_2:+32588040 | Msa0067580:CDS |
AAAACAAACGTTACAGCAGT+TGG | 0.553851 | 1_2:-32587593 | None:intergenic |
GGTCAATAGCAAGTCCAATA+GGG | 0.554065 | 1_2:+32588522 | Msa0067580:CDS |
GTTGTGACTCAGAACAAGGT+TGG | 0.560023 | 1_2:+32588815 | Msa0067580:CDS |
AAGAATTTCCCTGGTAGTAG+AGG | 0.560197 | 1_2:+32587452 | Msa0067580:CDS |
TCTAACATAGGCATTCTCTC+AGG | 0.560326 | 1_2:+32587233 | Msa0067580:CDS |
CCATAATAACAACAACAAAA+GGG | 0.560980 | 1_2:-32587805 | None:intergenic |
GAAGCTCAAGAGAGTGAGAG+TGG | 0.562224 | 1_2:-32587195 | None:intergenic |
GGGGAGGAGTTGAATTGCAA+TGG | 0.565523 | 1_2:+32588635 | Msa0067580:CDS |
TCCACCAAGTCCACATATTG+TGG | 0.566013 | 1_2:-32588044 | None:intergenic |
ATGACAACACCTCTACTACC+AGG | 0.567626 | 1_2:-32587461 | None:intergenic |
TCAAGAGAGTGAGAGTGGAT+TGG | 0.568198 | 1_2:-32587190 | None:intergenic |
TCTCATTGTTCAACCAACAC+TGG | 0.569882 | 1_2:+32587410 | Msa0067580:CDS |
AATGTGGTTATACTATGTGC+AGG | 0.572229 | 1_2:-32588118 | None:intergenic |
AAGGACTTGGGATCTAACAT+AGG | 0.575857 | 1_2:+32587221 | Msa0067580:CDS |
TGCCATTAGGGACACAAATG+TGG | 0.577289 | 1_2:-32588134 | None:intergenic |
GTTAAAGAGGAAGTCAGGGG+AGG | 0.578014 | 1_2:+32588619 | Msa0067580:CDS |
TTGTTATTATGGAAGAACAA+AGG | 0.585080 | 1_2:+32587816 | Msa0067580:CDS |
GCACTATGATCATTATCATG+AGG | 0.591440 | 1_2:-32587712 | None:intergenic |
GTTTCCTCTTCCCCAAGTAG+AGG | 0.594548 | 1_2:+32587962 | Msa0067580:CDS |
ACTAGTGTAAAGAATTTCCC+TGG | 0.597323 | 1_2:+32587443 | Msa0067580:CDS |
GCCACAATATGTGGACTTGG+TGG | 0.598104 | 1_2:+32588043 | Msa0067580:CDS |
ATGATCTTCACCTCTACTTG+GGG | 0.609933 | 1_2:-32587972 | None:intergenic |
CCCTTCAAGTCCTAACAGGA+AGG | 0.612591 | 1_2:+32587066 | Msa0067580:CDS |
TTATCATGAGGAACCCTGCA+AGG | 0.614007 | 1_2:-32587700 | None:intergenic |
CCAATTGTTAAGACAACCCA+AGG | 0.620677 | 1_2:-32587278 | None:intergenic |
CCTTCCTGTTAGGACTTGAA+GGG | 0.626337 | 1_2:-32587066 | None:intergenic |
GAGACACAAGTGCCCCAAAG+AGG | 0.631794 | 1_2:-32588703 | None:intergenic |
TGACAACACCTCTACTACCA+GGG | 0.633964 | 1_2:-32587460 | None:intergenic |
AGTGACTAAAGCTCCAGTGT+TGG | 0.645448 | 1_2:-32587423 | None:intergenic |
AAGCACATATTCCATACTGG+AGG | 0.647458 | 1_2:-32587365 | None:intergenic |
TTCAAGTCCTAACAGGAAGG+TGG | 0.648884 | 1_2:+32587069 | Msa0067580:CDS |
AGGGTTAAAGAGGAAGTCAG+GGG | 0.655064 | 1_2:+32588616 | Msa0067580:CDS |
ACTTGGTGGAACTCTTACTG+TGG | 0.667152 | 1_2:+32588057 | Msa0067580:CDS |
TGAGTCTGTGGCTTAGAAGG+AGG | 0.667868 | 1_2:-32587878 | None:intergenic |
ATTGGTTGTGACTCAGAACA+AGG | 0.669577 | 1_2:+32588811 | Msa0067580:CDS |
CATGGTTGGGAAAACACCAA+AGG | 0.678908 | 1_2:+32587038 | Msa0067580:CDS |
CCACAGACTCACCAATCTAG+AGG | 0.680979 | 1_2:+32587890 | Msa0067580:CDS |
TAATAACAACAACAAAAGGG+AGG | 0.691455 | 1_2:-32587802 | None:intergenic |
ATTGTTAAGACAACCCAAGG+AGG | 0.744267 | 1_2:-32587275 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAATAATGAAAATGAAT+TGG | + | chr1_2:32588793-32588812 | Msa0067580:CDS | 15.0% |
!! | TAGAAATAATGAAAATGAAT+TGG | + | chr1_2:32588793-32588812 | Msa0067580:CDS | 15.0% |
!! | CATAAGCAAAATTAAAGATT+TGG | - | chr1_2:32587564-32587583 | None:intergenic | 20.0% |
!!! | CAAATCTTTAATTTTGCTTA+TGG | + | chr1_2:32587562-32587581 | Msa0067580:CDS | 20.0% |
!! | AAGGAAATTATAAAAAGCTT+TGG | - | chr1_2:32587666-32587685 | None:intergenic | 20.0% |
!! | CATAAGCAAAATTAAAGATT+TGG | - | chr1_2:32587564-32587583 | None:intergenic | 20.0% |
!!! | CAAATCTTTAATTTTGCTTA+TGG | + | chr1_2:32587562-32587581 | Msa0067580:CDS | 20.0% |
!! | AAGGAAATTATAAAAAGCTT+TGG | - | chr1_2:32587666-32587685 | None:intergenic | 20.0% |
!! | ATTTGATTTCTCTTGAGTAT+AGG | - | chr1_2:32587154-32587173 | None:intergenic | 25.0% |
!! | AAGAGAAATCAAATCAGTTT+TGG | + | chr1_2:32587160-32587179 | Msa0067580:CDS | 25.0% |
!! | AGAGAAATCAAATCAGTTTT+GGG | + | chr1_2:32587161-32587180 | Msa0067580:CDS | 25.0% |
!!! | TTTTTGGCTATTTCATGATT+TGG | + | chr1_2:32587315-32587334 | Msa0067580:CDS | 25.0% |
! | ATGTGCTTATACATATTCAT+TGG | + | chr1_2:32587380-32587399 | Msa0067580:CDS | 25.0% |
!!! | TAAAAAGCTTTGGAATCATT+TGG | - | chr1_2:32587656-32587675 | None:intergenic | 25.0% |
! | CCATAATAACAACAACAAAA+GGG | - | chr1_2:32587808-32587827 | None:intergenic | 25.0% |
! | TCCATAATAACAACAACAAA+AGG | - | chr1_2:32587809-32587828 | None:intergenic | 25.0% |
!! | TTGTTATTATGGAAGAACAA+AGG | + | chr1_2:32587816-32587835 | Msa0067580:CDS | 25.0% |
! | GTAAATAACTTGAGTCAAAT+TGG | + | chr1_2:32588079-32588098 | Msa0067580:CDS | 25.0% |
! | AGTCAAATTGGATTATCTTT+AGG | + | chr1_2:32588091-32588110 | Msa0067580:CDS | 25.0% |
!!! | ATCCTTATATTGTCTTGTTT+TGG | + | chr1_2:32588350-32588369 | Msa0067580:intron | 25.0% |
! | TATGTAGCATCAATTATTGT+TGG | + | chr1_2:32588410-32588429 | Msa0067580:intron | 25.0% |
!! | ATTTGATTTCTCTTGAGTAT+AGG | - | chr1_2:32587154-32587173 | None:intergenic | 25.0% |
!! | AAGAGAAATCAAATCAGTTT+TGG | + | chr1_2:32587160-32587179 | Msa0067580:CDS | 25.0% |
!! | AGAGAAATCAAATCAGTTTT+GGG | + | chr1_2:32587161-32587180 | Msa0067580:CDS | 25.0% |
!!! | TTTTTGGCTATTTCATGATT+TGG | + | chr1_2:32587315-32587334 | Msa0067580:CDS | 25.0% |
! | ATGTGCTTATACATATTCAT+TGG | + | chr1_2:32587380-32587399 | Msa0067580:CDS | 25.0% |
!!! | TAAAAAGCTTTGGAATCATT+TGG | - | chr1_2:32587656-32587675 | None:intergenic | 25.0% |
! | CCATAATAACAACAACAAAA+GGG | - | chr1_2:32587808-32587827 | None:intergenic | 25.0% |
! | TCCATAATAACAACAACAAA+AGG | - | chr1_2:32587809-32587828 | None:intergenic | 25.0% |
!! | TTGTTATTATGGAAGAACAA+AGG | + | chr1_2:32587816-32587835 | Msa0067580:CDS | 25.0% |
! | GTAAATAACTTGAGTCAAAT+TGG | + | chr1_2:32588079-32588098 | Msa0067580:CDS | 25.0% |
! | AGTCAAATTGGATTATCTTT+AGG | + | chr1_2:32588091-32588110 | Msa0067580:CDS | 25.0% |
!!! | ATCCTTATATTGTCTTGTTT+TGG | + | chr1_2:32588350-32588369 | Msa0067580:intron | 25.0% |
! | TATGTAGCATCAATTATTGT+TGG | + | chr1_2:32588410-32588429 | Msa0067580:intron | 25.0% |
TTTATGATCATGTCAGTATC+TGG | + | chr1_2:32587110-32587129 | Msa0067580:CDS | 30.0% | |
TATAAGCACATATTCCATAC+TGG | - | chr1_2:32587371-32587390 | None:intergenic | 30.0% | |
!! | CTTTAATTTTGCTTATGGCT+TGG | + | chr1_2:32587567-32587586 | Msa0067580:CDS | 30.0% |
CAAGGATTAAAGACATGTAA+AGG | - | chr1_2:32587685-32587704 | None:intergenic | 30.0% | |
TAATAACAACAACAAAAGGG+AGG | - | chr1_2:32587805-32587824 | None:intergenic | 30.0% | |
!!! | CCCTTTTGTTGTTGTTATTA+TGG | + | chr1_2:32587805-32587824 | Msa0067580:CDS | 30.0% |
TTATGGAAGAACAAAGGATT+TGG | + | chr1_2:32587822-32587841 | Msa0067580:CDS | 30.0% | |
ATAGATCCAAATTGCCATTA+GGG | - | chr1_2:32588149-32588168 | None:intergenic | 30.0% | |
TATCTAGGTAAAGTTACACA+AGG | + | chr1_2:32588166-32588185 | Msa0067580:intron | 30.0% | |
ATCTAGGTAAAGTTACACAA+GGG | + | chr1_2:32588167-32588186 | Msa0067580:intron | 30.0% | |
GACCAAAACAAGACAATATA+AGG | - | chr1_2:32588355-32588374 | None:intergenic | 30.0% | |
!! | ATTATTGTTGGTTTCTGCTT+TGG | + | chr1_2:32588422-32588441 | Msa0067580:CDS | 30.0% |
GATATGATTGAAAACAGTAC+TGG | - | chr1_2:32588458-32588477 | None:intergenic | 30.0% | |
TCAATCATATCTGAACTCTT+TGG | + | chr1_2:32588467-32588486 | Msa0067580:CDS | 30.0% | |
TACTCAACATTGTACAATGT+TGG | + | chr1_2:32588500-32588519 | Msa0067580:CDS | 30.0% | |
ACTCAACATTGTACAATGTT+GGG | + | chr1_2:32588501-32588520 | Msa0067580:CDS | 30.0% | |
! | GTCATACTTGTTAAGTGTTA+GGG | + | chr1_2:32588544-32588563 | Msa0067580:CDS | 30.0% |
CATATACAAAAAGTTCAGAG+AGG | + | chr1_2:32588766-32588785 | Msa0067580:CDS | 30.0% | |
TTTATGATCATGTCAGTATC+TGG | + | chr1_2:32587110-32587129 | Msa0067580:CDS | 30.0% | |
TATAAGCACATATTCCATAC+TGG | - | chr1_2:32587371-32587390 | None:intergenic | 30.0% | |
!! | CTTTAATTTTGCTTATGGCT+TGG | + | chr1_2:32587567-32587586 | Msa0067580:CDS | 30.0% |
CAAGGATTAAAGACATGTAA+AGG | - | chr1_2:32587685-32587704 | None:intergenic | 30.0% | |
TAATAACAACAACAAAAGGG+AGG | - | chr1_2:32587805-32587824 | None:intergenic | 30.0% | |
!!! | CCCTTTTGTTGTTGTTATTA+TGG | + | chr1_2:32587805-32587824 | Msa0067580:CDS | 30.0% |
TTATGGAAGAACAAAGGATT+TGG | + | chr1_2:32587822-32587841 | Msa0067580:CDS | 30.0% | |
ATAGATCCAAATTGCCATTA+GGG | - | chr1_2:32588149-32588168 | None:intergenic | 30.0% | |
TATCTAGGTAAAGTTACACA+AGG | + | chr1_2:32588166-32588185 | Msa0067580:intron | 30.0% | |
ATCTAGGTAAAGTTACACAA+GGG | + | chr1_2:32588167-32588186 | Msa0067580:intron | 30.0% | |
GACCAAAACAAGACAATATA+AGG | - | chr1_2:32588355-32588374 | None:intergenic | 30.0% | |
!! | ATTATTGTTGGTTTCTGCTT+TGG | + | chr1_2:32588422-32588441 | Msa0067580:CDS | 30.0% |
GATATGATTGAAAACAGTAC+TGG | - | chr1_2:32588458-32588477 | None:intergenic | 30.0% | |
TCAATCATATCTGAACTCTT+TGG | + | chr1_2:32588467-32588486 | Msa0067580:CDS | 30.0% | |
TACTCAACATTGTACAATGT+TGG | + | chr1_2:32588500-32588519 | Msa0067580:CDS | 30.0% | |
ACTCAACATTGTACAATGTT+GGG | + | chr1_2:32588501-32588520 | Msa0067580:CDS | 30.0% | |
! | GTCATACTTGTTAAGTGTTA+GGG | + | chr1_2:32588544-32588563 | Msa0067580:CDS | 30.0% |
CATATACAAAAAGTTCAGAG+AGG | + | chr1_2:32588766-32588785 | Msa0067580:CDS | 30.0% | |
!! | GTATTTTCAGGAAAGCAACA+TGG | + | chr1_2:32587020-32587039 | Msa0067580:CDS | 35.0% |
TATTCCATACTGGAGGTTTA+GGG | - | chr1_2:32587361-32587380 | None:intergenic | 35.0% | |
ATATTCCATACTGGAGGTTT+AGG | - | chr1_2:32587362-32587381 | None:intergenic | 35.0% | |
GTTGGTTGAACAATGAGAAT+TGG | - | chr1_2:32587408-32587427 | None:intergenic | 35.0% | |
ACTAGTGTAAAGAATTTCCC+TGG | + | chr1_2:32587443-32587462 | Msa0067580:CDS | 35.0% | |
AACCAAGATAACCACTCAAA+AGG | - | chr1_2:32587490-32587509 | None:intergenic | 35.0% | |
CAACTATACTATGCCTTCTA+CGG | + | chr1_2:32587530-32587549 | Msa0067580:CDS | 35.0% | |
AAAACAAACGTTACAGCAGT+TGG | - | chr1_2:32587596-32587615 | None:intergenic | 35.0% | |
CTCTTATGGTGCTTAATAAC+TGG | - | chr1_2:32587623-32587642 | None:intergenic | 35.0% | |
TACATGTCTTTAATCCTTGC+AGG | + | chr1_2:32587686-32587705 | Msa0067580:CDS | 35.0% | |
ACATGTCTTTAATCCTTGCA+GGG | + | chr1_2:32587687-32587706 | Msa0067580:CDS | 35.0% | |
GCACTATGATCATTATCATG+AGG | - | chr1_2:32587715-32587734 | None:intergenic | 35.0% | |
TATGATCTTCACCTCTACTT+GGG | - | chr1_2:32587976-32587995 | None:intergenic | 35.0% | |
CAAAAAGAGTCATCATGTCA+AGG | - | chr1_2:32588021-32588040 | None:intergenic | 35.0% | |
! | CTTTTTGTAGCCACAATATG+TGG | + | chr1_2:32588034-32588053 | Msa0067580:CDS | 35.0% |
AATGTGGTTATACTATGTGC+AGG | - | chr1_2:32588121-32588140 | None:intergenic | 35.0% | |
GATAGATCCAAATTGCCATT+AGG | - | chr1_2:32588150-32588169 | None:intergenic | 35.0% | |
ATGGCAATTTGGATCTATCT+AGG | + | chr1_2:32588151-32588170 | Msa0067580:CDS | 35.0% | |
TCTAGGTAAAGTTACACAAG+GGG | + | chr1_2:32588168-32588187 | Msa0067580:intron | 35.0% | |
GGACATCAAATGCAATTAGA+AGG | - | chr1_2:32588379-32588398 | None:intergenic | 35.0% | |
ATGCTACATAAAGACCATGT+GGG | - | chr1_2:32588400-32588419 | None:intergenic | 35.0% | |
CTTAACAAGTATGACCCTAT+TGG | - | chr1_2:32588539-32588558 | None:intergenic | 35.0% | |
! | GGTCATACTTGTTAAGTGTT+AGG | + | chr1_2:32588543-32588562 | Msa0067580:CDS | 35.0% |
! | TAATGCTGCCATTTGCTTTA+GGG | - | chr1_2:32588597-32588616 | None:intergenic | 35.0% |
TAAAGCAAATGGCAGCATTA+GGG | + | chr1_2:32588597-32588616 | Msa0067580:CDS | 35.0% | |
TGGAAGTGAATGCTACAAAT+TGG | + | chr1_2:32588655-32588674 | Msa0067580:CDS | 35.0% | |
! | TGTCTCTAACTTTGGTGATA+AGG | + | chr1_2:32588720-32588739 | Msa0067580:CDS | 35.0% |
!! | GTATTTTCAGGAAAGCAACA+TGG | + | chr1_2:32587020-32587039 | Msa0067580:CDS | 35.0% |
TATTCCATACTGGAGGTTTA+GGG | - | chr1_2:32587361-32587380 | None:intergenic | 35.0% | |
ATATTCCATACTGGAGGTTT+AGG | - | chr1_2:32587362-32587381 | None:intergenic | 35.0% | |
GTTGGTTGAACAATGAGAAT+TGG | - | chr1_2:32587408-32587427 | None:intergenic | 35.0% | |
ACTAGTGTAAAGAATTTCCC+TGG | + | chr1_2:32587443-32587462 | Msa0067580:CDS | 35.0% | |
AACCAAGATAACCACTCAAA+AGG | - | chr1_2:32587490-32587509 | None:intergenic | 35.0% | |
CAACTATACTATGCCTTCTA+CGG | + | chr1_2:32587530-32587549 | Msa0067580:CDS | 35.0% | |
AAAACAAACGTTACAGCAGT+TGG | - | chr1_2:32587596-32587615 | None:intergenic | 35.0% | |
CTCTTATGGTGCTTAATAAC+TGG | - | chr1_2:32587623-32587642 | None:intergenic | 35.0% | |
TACATGTCTTTAATCCTTGC+AGG | + | chr1_2:32587686-32587705 | Msa0067580:CDS | 35.0% | |
ACATGTCTTTAATCCTTGCA+GGG | + | chr1_2:32587687-32587706 | Msa0067580:CDS | 35.0% | |
GCACTATGATCATTATCATG+AGG | - | chr1_2:32587715-32587734 | None:intergenic | 35.0% | |
TATGATCTTCACCTCTACTT+GGG | - | chr1_2:32587976-32587995 | None:intergenic | 35.0% | |
CAAAAAGAGTCATCATGTCA+AGG | - | chr1_2:32588021-32588040 | None:intergenic | 35.0% | |
! | CTTTTTGTAGCCACAATATG+TGG | + | chr1_2:32588034-32588053 | Msa0067580:CDS | 35.0% |
AATGTGGTTATACTATGTGC+AGG | - | chr1_2:32588121-32588140 | None:intergenic | 35.0% | |
GATAGATCCAAATTGCCATT+AGG | - | chr1_2:32588150-32588169 | None:intergenic | 35.0% | |
ATGGCAATTTGGATCTATCT+AGG | + | chr1_2:32588151-32588170 | Msa0067580:CDS | 35.0% | |
TCTAGGTAAAGTTACACAAG+GGG | + | chr1_2:32588168-32588187 | Msa0067580:intron | 35.0% | |
GGACATCAAATGCAATTAGA+AGG | - | chr1_2:32588379-32588398 | None:intergenic | 35.0% | |
ATGCTACATAAAGACCATGT+GGG | - | chr1_2:32588400-32588419 | None:intergenic | 35.0% | |
CTTAACAAGTATGACCCTAT+TGG | - | chr1_2:32588539-32588558 | None:intergenic | 35.0% | |
! | GGTCATACTTGTTAAGTGTT+AGG | + | chr1_2:32588543-32588562 | Msa0067580:CDS | 35.0% |
! | TAATGCTGCCATTTGCTTTA+GGG | - | chr1_2:32588597-32588616 | None:intergenic | 35.0% |
TAAAGCAAATGGCAGCATTA+GGG | + | chr1_2:32588597-32588616 | Msa0067580:CDS | 35.0% | |
TGGAAGTGAATGCTACAAAT+TGG | + | chr1_2:32588655-32588674 | Msa0067580:CDS | 35.0% | |
! | TGTCTCTAACTTTGGTGATA+AGG | + | chr1_2:32588720-32588739 | Msa0067580:CDS | 35.0% |
TTTCAGGAAAGCAACATGGT+TGG | + | chr1_2:32587024-32587043 | Msa0067580:CDS | 40.0% | |
TTCAGGAAAGCAACATGGTT+GGG | + | chr1_2:32587025-32587044 | Msa0067580:CDS | 40.0% | |
TTGAGCTTCTTCAAGGACTT+GGG | + | chr1_2:32587209-32587228 | Msa0067580:CDS | 40.0% | |
AAGGACTTGGGATCTAACAT+AGG | + | chr1_2:32587221-32587240 | Msa0067580:CDS | 40.0% | |
TCTAACATAGGCATTCTCTC+AGG | + | chr1_2:32587233-32587252 | Msa0067580:CDS | 40.0% | |
TCAATGAAATCACACCTCCT+TGG | + | chr1_2:32587261-32587280 | Msa0067580:CDS | 40.0% | |
CAATGAAATCACACCTCCTT+GGG | + | chr1_2:32587262-32587281 | Msa0067580:CDS | 40.0% | |
ATTGTTAAGACAACCCAAGG+AGG | - | chr1_2:32587278-32587297 | None:intergenic | 40.0% | |
CCAATTGTTAAGACAACCCA+AGG | - | chr1_2:32587281-32587300 | None:intergenic | 40.0% | |
! | CCTTGGGTTGTCTTAACAAT+TGG | + | chr1_2:32587278-32587297 | Msa0067580:CDS | 40.0% |
TGGGTTGTCTTAACAATTGG+TGG | + | chr1_2:32587281-32587300 | Msa0067580:CDS | 40.0% | |
!!! | GGTGGTCTTCTCAACTTTTT+TGG | + | chr1_2:32587299-32587318 | Msa0067580:CDS | 40.0% |
AAATCCCTAAACCTCCAGTA+TGG | + | chr1_2:32587354-32587373 | Msa0067580:CDS | 40.0% | |
AAGCACATATTCCATACTGG+AGG | - | chr1_2:32587368-32587387 | None:intergenic | 40.0% | |
TCTCATTGTTCAACCAACAC+TGG | + | chr1_2:32587410-32587429 | Msa0067580:CDS | 40.0% | |
AAGAATTTCCCTGGTAGTAG+AGG | + | chr1_2:32587452-32587471 | Msa0067580:CDS | 40.0% | |
! | AGTGGTTATCTTGGTTTGAG+TGG | + | chr1_2:32587494-32587513 | Msa0067580:CDS | 40.0% |
! | TTTGGAGTCATTTCCGTAGA+AGG | - | chr1_2:32587546-32587565 | None:intergenic | 40.0% |
TTGGTTGTTCAGCTCTCTTA+TGG | - | chr1_2:32587637-32587656 | None:intergenic | 40.0% | |
!! | GAGCAAGAGAAGCATCAAAA+TGG | - | chr1_2:32587780-32587799 | None:intergenic | 40.0% |
ATGATCTTCACCTCTACTTG+GGG | - | chr1_2:32587975-32587994 | None:intergenic | 40.0% | |
GTATGATCTTCACCTCTACT+TGG | - | chr1_2:32587977-32587996 | None:intergenic | 40.0% | |
CATCATGTCAAGGCTGAAAA+TGG | - | chr1_2:32588011-32588030 | None:intergenic | 40.0% | |
AACCACATTTGTGTCCCTAA+TGG | + | chr1_2:32588132-32588151 | Msa0067580:CDS | 40.0% | |
TTGTGTCCCTAATGGCAATT+TGG | + | chr1_2:32588140-32588159 | Msa0067580:CDS | 40.0% | |
ATTGCATTTGATGTCCCACA+TGG | + | chr1_2:32588383-32588402 | Msa0067580:intron | 40.0% | |
GATGCTACATAAAGACCATG+TGG | - | chr1_2:32588401-32588420 | None:intergenic | 40.0% | |
! | GTTTCTGCTTTGGTGCAAAT+TGG | + | chr1_2:32588432-32588451 | Msa0067580:CDS | 40.0% |
GGTCAATAGCAAGTCCAATA+GGG | + | chr1_2:32588522-32588541 | Msa0067580:CDS | 40.0% | |
TTGTTAAGTGTTAGGGTTGC+TGG | + | chr1_2:32588551-32588570 | Msa0067580:CDS | 40.0% | |
CAAAGAAGCCCTAAAGCAAA+TGG | + | chr1_2:32588586-32588605 | Msa0067580:CDS | 40.0% | |
! | CTAATGCTGCCATTTGCTTT+AGG | - | chr1_2:32588598-32588617 | None:intergenic | 40.0% |
CTAAAGCAAATGGCAGCATT+AGG | + | chr1_2:32588596-32588615 | Msa0067580:CDS | 40.0% | |
TTAGGGTTAAAGAGGAAGTC+AGG | + | chr1_2:32588614-32588633 | Msa0067580:CDS | 40.0% | |
TAGGGTTAAAGAGGAAGTCA+GGG | + | chr1_2:32588615-32588634 | Msa0067580:CDS | 40.0% | |
ATTGGTTGTGACTCAGAACA+AGG | + | chr1_2:32588811-32588830 | Msa0067580:CDS | 40.0% | |
TTTCAGGAAAGCAACATGGT+TGG | + | chr1_2:32587024-32587043 | Msa0067580:CDS | 40.0% | |
TTCAGGAAAGCAACATGGTT+GGG | + | chr1_2:32587025-32587044 | Msa0067580:CDS | 40.0% | |
TTGAGCTTCTTCAAGGACTT+GGG | + | chr1_2:32587209-32587228 | Msa0067580:CDS | 40.0% | |
AAGGACTTGGGATCTAACAT+AGG | + | chr1_2:32587221-32587240 | Msa0067580:CDS | 40.0% | |
TCTAACATAGGCATTCTCTC+AGG | + | chr1_2:32587233-32587252 | Msa0067580:CDS | 40.0% | |
TCAATGAAATCACACCTCCT+TGG | + | chr1_2:32587261-32587280 | Msa0067580:CDS | 40.0% | |
CAATGAAATCACACCTCCTT+GGG | + | chr1_2:32587262-32587281 | Msa0067580:CDS | 40.0% | |
ATTGTTAAGACAACCCAAGG+AGG | - | chr1_2:32587278-32587297 | None:intergenic | 40.0% | |
CCAATTGTTAAGACAACCCA+AGG | - | chr1_2:32587281-32587300 | None:intergenic | 40.0% | |
! | CCTTGGGTTGTCTTAACAAT+TGG | + | chr1_2:32587278-32587297 | Msa0067580:CDS | 40.0% |
TGGGTTGTCTTAACAATTGG+TGG | + | chr1_2:32587281-32587300 | Msa0067580:CDS | 40.0% | |
!!! | GGTGGTCTTCTCAACTTTTT+TGG | + | chr1_2:32587299-32587318 | Msa0067580:CDS | 40.0% |
AAATCCCTAAACCTCCAGTA+TGG | + | chr1_2:32587354-32587373 | Msa0067580:CDS | 40.0% | |
AAGCACATATTCCATACTGG+AGG | - | chr1_2:32587368-32587387 | None:intergenic | 40.0% | |
TCTCATTGTTCAACCAACAC+TGG | + | chr1_2:32587410-32587429 | Msa0067580:CDS | 40.0% | |
AAGAATTTCCCTGGTAGTAG+AGG | + | chr1_2:32587452-32587471 | Msa0067580:CDS | 40.0% | |
! | AGTGGTTATCTTGGTTTGAG+TGG | + | chr1_2:32587494-32587513 | Msa0067580:CDS | 40.0% |
! | TTTGGAGTCATTTCCGTAGA+AGG | - | chr1_2:32587546-32587565 | None:intergenic | 40.0% |
TTGGTTGTTCAGCTCTCTTA+TGG | - | chr1_2:32587637-32587656 | None:intergenic | 40.0% | |
!! | GAGCAAGAGAAGCATCAAAA+TGG | - | chr1_2:32587780-32587799 | None:intergenic | 40.0% |
ATGATCTTCACCTCTACTTG+GGG | - | chr1_2:32587975-32587994 | None:intergenic | 40.0% | |
GTATGATCTTCACCTCTACT+TGG | - | chr1_2:32587977-32587996 | None:intergenic | 40.0% | |
CATCATGTCAAGGCTGAAAA+TGG | - | chr1_2:32588011-32588030 | None:intergenic | 40.0% | |
AACCACATTTGTGTCCCTAA+TGG | + | chr1_2:32588132-32588151 | Msa0067580:CDS | 40.0% | |
TTGTGTCCCTAATGGCAATT+TGG | + | chr1_2:32588140-32588159 | Msa0067580:CDS | 40.0% | |
ATTGCATTTGATGTCCCACA+TGG | + | chr1_2:32588383-32588402 | Msa0067580:intron | 40.0% | |
GATGCTACATAAAGACCATG+TGG | - | chr1_2:32588401-32588420 | None:intergenic | 40.0% | |
! | GTTTCTGCTTTGGTGCAAAT+TGG | + | chr1_2:32588432-32588451 | Msa0067580:CDS | 40.0% |
GGTCAATAGCAAGTCCAATA+GGG | + | chr1_2:32588522-32588541 | Msa0067580:CDS | 40.0% | |
TTGTTAAGTGTTAGGGTTGC+TGG | + | chr1_2:32588551-32588570 | Msa0067580:CDS | 40.0% | |
CAAAGAAGCCCTAAAGCAAA+TGG | + | chr1_2:32588586-32588605 | Msa0067580:CDS | 40.0% | |
! | CTAATGCTGCCATTTGCTTT+AGG | - | chr1_2:32588598-32588617 | None:intergenic | 40.0% |
CTAAAGCAAATGGCAGCATT+AGG | + | chr1_2:32588596-32588615 | Msa0067580:CDS | 40.0% | |
TTAGGGTTAAAGAGGAAGTC+AGG | + | chr1_2:32588614-32588633 | Msa0067580:CDS | 40.0% | |
TAGGGTTAAAGAGGAAGTCA+GGG | + | chr1_2:32588615-32588634 | Msa0067580:CDS | 40.0% | |
ATTGGTTGTGACTCAGAACA+AGG | + | chr1_2:32588811-32588830 | Msa0067580:CDS | 40.0% | |
CATGGTTGGGAAAACACCAA+AGG | + | chr1_2:32587038-32587057 | Msa0067580:CDS | 45.0% | |
TTCACCCTTCAAGTCCTAAC+AGG | + | chr1_2:32587062-32587081 | Msa0067580:CDS | 45.0% | |
CCTTCCTGTTAGGACTTGAA+GGG | - | chr1_2:32587069-32587088 | None:intergenic | 45.0% | |
ACCTTCCTGTTAGGACTTGA+AGG | - | chr1_2:32587070-32587089 | None:intergenic | 45.0% | |
TTCAAGTCCTAACAGGAAGG+TGG | + | chr1_2:32587069-32587088 | Msa0067580:CDS | 45.0% | |
CCATAAACCACCTTCCTGTT+AGG | - | chr1_2:32587079-32587098 | None:intergenic | 45.0% | |
CCTAACAGGAAGGTGGTTTA+TGG | + | chr1_2:32587076-32587095 | Msa0067580:CDS | 45.0% | |
! | TCTGGAGCAAGCTACATGTT+TGG | + | chr1_2:32587128-32587147 | Msa0067580:CDS | 45.0% |
TCAAGAGAGTGAGAGTGGAT+TGG | - | chr1_2:32587193-32587212 | None:intergenic | 45.0% | |
CACTCTCTTGAGCTTCTTCA+AGG | + | chr1_2:32587202-32587221 | Msa0067580:CDS | 45.0% | |
CTTGAGCTTCTTCAAGGACT+TGG | + | chr1_2:32587208-32587227 | Msa0067580:CDS | 45.0% | |
AGTGACTAAAGCTCCAGTGT+TGG | - | chr1_2:32587426-32587445 | None:intergenic | 45.0% | |
TGACAACACCTCTACTACCA+GGG | - | chr1_2:32587463-32587482 | None:intergenic | 45.0% | |
ATGACAACACCTCTACTACC+AGG | - | chr1_2:32587464-32587483 | None:intergenic | 45.0% | |
!! | GGTAGTAGAGGTGTTGTCAT+AGG | + | chr1_2:32587464-32587483 | Msa0067580:CDS | 45.0% |
! | GTTGTCATAGGCCTTTTGAG+TGG | + | chr1_2:32587476-32587495 | Msa0067580:CDS | 45.0% |
!! | GGCCTTTTGAGTGGTTATCT+TGG | + | chr1_2:32587485-32587504 | Msa0067580:CDS | 45.0% |
TTATCATGAGGAACCCTGCA+AGG | - | chr1_2:32587703-32587722 | None:intergenic | 45.0% | |
GAGTAGTCTCTCCTCTAGAT+TGG | - | chr1_2:32587904-32587923 | None:intergenic | 45.0% | |
GTAGCCACAATATGTGGACT+TGG | + | chr1_2:32588040-32588059 | Msa0067580:CDS | 45.0% | |
TCCACCAAGTCCACATATTG+TGG | - | chr1_2:32588047-32588066 | None:intergenic | 45.0% | |
! | ACTTGGTGGAACTCTTACTG+TGG | + | chr1_2:32588057-32588076 | Msa0067580:CDS | 45.0% |
TGCCATTAGGGACACAAATG+TGG | - | chr1_2:32588137-32588156 | None:intergenic | 45.0% | |
AGGATTGATGTGAGCATGAG+AGG | - | chr1_2:32588335-32588354 | None:intergenic | 45.0% | |
GGGTCAATAGCAAGTCCAAT+AGG | + | chr1_2:32588521-32588540 | Msa0067580:CDS | 45.0% | |
TGGCAGCATTAGGGTTAAAG+AGG | + | chr1_2:32588606-32588625 | Msa0067580:CDS | 45.0% | |
AGGGTTAAAGAGGAAGTCAG+GGG | + | chr1_2:32588616-32588635 | Msa0067580:CDS | 45.0% | |
! | ATCACTGCTGTTAGCCTCTT+TGG | + | chr1_2:32588689-32588708 | Msa0067580:CDS | 45.0% |
! | TCACTGCTGTTAGCCTCTTT+GGG | + | chr1_2:32588690-32588709 | Msa0067580:CDS | 45.0% |
GGCACTTGTGTCTCTAACTT+TGG | + | chr1_2:32588712-32588731 | Msa0067580:CDS | 45.0% | |
GTTGTGACTCAGAACAAGGT+TGG | + | chr1_2:32588815-32588834 | Msa0067580:CDS | 45.0% | |
CATGGTTGGGAAAACACCAA+AGG | + | chr1_2:32587038-32587057 | Msa0067580:CDS | 45.0% | |
TTCACCCTTCAAGTCCTAAC+AGG | + | chr1_2:32587062-32587081 | Msa0067580:CDS | 45.0% | |
CCTTCCTGTTAGGACTTGAA+GGG | - | chr1_2:32587069-32587088 | None:intergenic | 45.0% | |
ACCTTCCTGTTAGGACTTGA+AGG | - | chr1_2:32587070-32587089 | None:intergenic | 45.0% | |
TTCAAGTCCTAACAGGAAGG+TGG | + | chr1_2:32587069-32587088 | Msa0067580:CDS | 45.0% | |
CCATAAACCACCTTCCTGTT+AGG | - | chr1_2:32587079-32587098 | None:intergenic | 45.0% | |
CCTAACAGGAAGGTGGTTTA+TGG | + | chr1_2:32587076-32587095 | Msa0067580:CDS | 45.0% | |
! | TCTGGAGCAAGCTACATGTT+TGG | + | chr1_2:32587128-32587147 | Msa0067580:CDS | 45.0% |
TCAAGAGAGTGAGAGTGGAT+TGG | - | chr1_2:32587193-32587212 | None:intergenic | 45.0% | |
CACTCTCTTGAGCTTCTTCA+AGG | + | chr1_2:32587202-32587221 | Msa0067580:CDS | 45.0% | |
CTTGAGCTTCTTCAAGGACT+TGG | + | chr1_2:32587208-32587227 | Msa0067580:CDS | 45.0% | |
AGTGACTAAAGCTCCAGTGT+TGG | - | chr1_2:32587426-32587445 | None:intergenic | 45.0% | |
TGACAACACCTCTACTACCA+GGG | - | chr1_2:32587463-32587482 | None:intergenic | 45.0% | |
ATGACAACACCTCTACTACC+AGG | - | chr1_2:32587464-32587483 | None:intergenic | 45.0% | |
!! | GGTAGTAGAGGTGTTGTCAT+AGG | + | chr1_2:32587464-32587483 | Msa0067580:CDS | 45.0% |
! | GTTGTCATAGGCCTTTTGAG+TGG | + | chr1_2:32587476-32587495 | Msa0067580:CDS | 45.0% |
!! | GGCCTTTTGAGTGGTTATCT+TGG | + | chr1_2:32587485-32587504 | Msa0067580:CDS | 45.0% |
TTATCATGAGGAACCCTGCA+AGG | - | chr1_2:32587703-32587722 | None:intergenic | 45.0% | |
GAGTAGTCTCTCCTCTAGAT+TGG | - | chr1_2:32587904-32587923 | None:intergenic | 45.0% | |
GTAGCCACAATATGTGGACT+TGG | + | chr1_2:32588040-32588059 | Msa0067580:CDS | 45.0% | |
TCCACCAAGTCCACATATTG+TGG | - | chr1_2:32588047-32588066 | None:intergenic | 45.0% | |
! | ACTTGGTGGAACTCTTACTG+TGG | + | chr1_2:32588057-32588076 | Msa0067580:CDS | 45.0% |
TGCCATTAGGGACACAAATG+TGG | - | chr1_2:32588137-32588156 | None:intergenic | 45.0% | |
AGGATTGATGTGAGCATGAG+AGG | - | chr1_2:32588335-32588354 | None:intergenic | 45.0% | |
GGGTCAATAGCAAGTCCAAT+AGG | + | chr1_2:32588521-32588540 | Msa0067580:CDS | 45.0% | |
TGGCAGCATTAGGGTTAAAG+AGG | + | chr1_2:32588606-32588625 | Msa0067580:CDS | 45.0% | |
AGGGTTAAAGAGGAAGTCAG+GGG | + | chr1_2:32588616-32588635 | Msa0067580:CDS | 45.0% | |
! | ATCACTGCTGTTAGCCTCTT+TGG | + | chr1_2:32588689-32588708 | Msa0067580:CDS | 45.0% |
! | TCACTGCTGTTAGCCTCTTT+GGG | + | chr1_2:32588690-32588709 | Msa0067580:CDS | 45.0% |
GGCACTTGTGTCTCTAACTT+TGG | + | chr1_2:32588712-32588731 | Msa0067580:CDS | 45.0% | |
GTTGTGACTCAGAACAAGGT+TGG | + | chr1_2:32588815-32588834 | Msa0067580:CDS | 45.0% | |
GACTTGAAGGGTGAAGCCTT+TGG | - | chr1_2:32587057-32587076 | None:intergenic | 50.0% | |
CCCTTCAAGTCCTAACAGGA+AGG | + | chr1_2:32587066-32587085 | Msa0067580:CDS | 50.0% | |
GAAGCTCAAGAGAGTGAGAG+TGG | - | chr1_2:32587198-32587217 | None:intergenic | 50.0% | |
TGAGTCTGTGGCTTAGAAGG+AGG | - | chr1_2:32587881-32587900 | None:intergenic | 50.0% | |
TGGTGAGTCTGTGGCTTAGA+AGG | - | chr1_2:32587884-32587903 | None:intergenic | 50.0% | |
CCTCTAGATTGGTGAGTCTG+TGG | - | chr1_2:32587893-32587912 | None:intergenic | 50.0% | |
CCACAGACTCACCAATCTAG+AGG | + | chr1_2:32587890-32587909 | Msa0067580:CDS | 50.0% | |
GTTTCCTCTTCCCCAAGTAG+AGG | + | chr1_2:32587962-32587981 | Msa0067580:CDS | 50.0% | |
TTCACCTCTACTTGGGGAAG+AGG | - | chr1_2:32587969-32587988 | None:intergenic | 50.0% | |
GCCACAATATGTGGACTTGG+TGG | + | chr1_2:32588043-32588062 | Msa0067580:CDS | 50.0% | |
GTTAAAGAGGAAGTCAGGGG+AGG | + | chr1_2:32588619-32588638 | Msa0067580:CDS | 50.0% | |
GGGGAGGAGTTGAATTGCAA+TGG | + | chr1_2:32588635-32588654 | Msa0067580:CDS | 50.0% | |
! | CACTGCTGTTAGCCTCTTTG+GGG | + | chr1_2:32588691-32588710 | Msa0067580:CDS | 50.0% |
GACTTGAAGGGTGAAGCCTT+TGG | - | chr1_2:32587057-32587076 | None:intergenic | 50.0% | |
CCCTTCAAGTCCTAACAGGA+AGG | + | chr1_2:32587066-32587085 | Msa0067580:CDS | 50.0% | |
GAAGCTCAAGAGAGTGAGAG+TGG | - | chr1_2:32587198-32587217 | None:intergenic | 50.0% | |
TGAGTCTGTGGCTTAGAAGG+AGG | - | chr1_2:32587881-32587900 | None:intergenic | 50.0% | |
TGGTGAGTCTGTGGCTTAGA+AGG | - | chr1_2:32587884-32587903 | None:intergenic | 50.0% | |
CCTCTAGATTGGTGAGTCTG+TGG | - | chr1_2:32587893-32587912 | None:intergenic | 50.0% | |
CCACAGACTCACCAATCTAG+AGG | + | chr1_2:32587890-32587909 | Msa0067580:CDS | 50.0% | |
GTTTCCTCTTCCCCAAGTAG+AGG | + | chr1_2:32587962-32587981 | Msa0067580:CDS | 50.0% | |
TTCACCTCTACTTGGGGAAG+AGG | - | chr1_2:32587969-32587988 | None:intergenic | 50.0% | |
GCCACAATATGTGGACTTGG+TGG | + | chr1_2:32588043-32588062 | Msa0067580:CDS | 50.0% | |
GTTAAAGAGGAAGTCAGGGG+AGG | + | chr1_2:32588619-32588638 | Msa0067580:CDS | 50.0% | |
GGGGAGGAGTTGAATTGCAA+TGG | + | chr1_2:32588635-32588654 | Msa0067580:CDS | 50.0% | |
! | CACTGCTGTTAGCCTCTTTG+GGG | + | chr1_2:32588691-32588710 | Msa0067580:CDS | 50.0% |
GAGACACAAGTGCCCCAAAG+AGG | - | chr1_2:32588706-32588725 | None:intergenic | 55.0% | |
GAGACACAAGTGCCCCAAAG+AGG | - | chr1_2:32588706-32588725 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 32587017 | 32588859 | 32587017 | ID=Msa0067580;Name=Msa0067580 |
chr1_2 | mRNA | 32587017 | 32588859 | 32587017 | ID=Msa0067580-mRNA-1;Parent=Msa0067580;Name=Msa0067580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|532 |
chr1_2 | exon | 32587017 | 32588172 | 32587017 | ID=Msa0067580-mRNA-1:exon:10662;Parent=Msa0067580-mRNA-1 |
chr1_2 | exon | 32588417 | 32588859 | 32588417 | ID=Msa0067580-mRNA-1:exon:10663;Parent=Msa0067580-mRNA-1 |
chr1_2 | CDS | 32587017 | 32588172 | 32587017 | ID=Msa0067580-mRNA-1:cds;Parent=Msa0067580-mRNA-1 |
chr1_2 | CDS | 32588417 | 32588859 | 32588417 | ID=Msa0067580-mRNA-1:cds;Parent=Msa0067580-mRNA-1 |
Gene Sequence |
Protein sequence |