AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0840500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840500 MtrunA17_Chr5g0409771 85.714 497 33 3 4 462 59 555 0.0 834
Msa0840500 MtrunA17_Chr4g0039791 74.549 499 87 4 4 462 63 561 0.0 704
Msa0840500 MtrunA17_Chr5g0409791 74.460 509 80 4 4 462 60 568 0.0 704
Msa0840500 MtrunA17_Chr4g0028411 41.344 491 246 6 4 454 46 534 3.44e-125 374
Msa0840500 MtrunA17_Chr8g0353341 43.368 475 217 8 2 425 53 526 3.97e-124 372
Msa0840500 MtrunA17_Chr2g0327341 39.798 495 261 5 4 462 46 539 1.09e-122 368
Msa0840500 MtrunA17_Chr1g0197391 43.788 491 230 9 4 454 74 558 5.50e-122 367
Msa0840500 MtrunA17_Chr3g0116271 40.329 486 252 6 4 454 68 550 2.19e-121 365
Msa0840500 MtrunA17_Chr1g0157401 48.333 360 167 2 122 462 201 560 5.54e-119 359
Msa0840500 MtrunA17_Chr3g0116251 39.337 483 258 6 4 454 69 548 1.11e-116 353
Msa0840500 MtrunA17_Chr1g0180551 38.020 505 252 10 4 454 116 613 6.69e-110 338
Msa0840500 MtrunA17_Chr1g0180541 38.076 499 256 9 4 454 47 540 7.70e-107 327
Msa0840500 MtrunA17_Chr4g0072561 38.833 497 252 11 4 454 50 540 2.71e-102 316
Msa0840500 MtrunA17_Chr1g0186071 38.446 489 253 7 4 456 74 550 4.77e-102 315
Msa0840500 MtrunA17_Chr4g0000461 39.679 499 249 11 3 455 43 535 5.75e-95 296
Msa0840500 MtrunA17_Chr3g0102411 34.731 501 279 8 4 462 47 541 7.64e-95 296
Msa0840500 MtrunA17_Chr5g0395431 37.876 499 267 9 4 460 88 585 1.03e-93 295
Msa0840500 MtrunA17_Chr2g0334131 44.286 280 142 4 193 458 1 280 1.17e-68 220
Msa0840500 MtrunA17_Chr6g0471921 28.898 481 294 10 13 452 32 505 9.67e-49 174
Msa0840500 MtrunA17_Chr5g0433241 27.680 513 296 15 11 456 38 542 1.23e-42 158
Msa0840500 MtrunA17_Chr5g0433231 29.006 362 222 8 124 455 186 542 2.35e-38 146
Msa0840500 MtrunA17_Chr5g0396311 28.628 503 294 15 12 456 39 534 1.56e-35 138
Msa0840500 MtrunA17_Chr6g0471311 27.747 364 224 10 124 455 188 544 1.29e-34 136
Msa0840500 MtrunA17_Chr2g0301671 31.025 361 209 14 129 455 198 552 6.40e-34 134
Msa0840500 MtrunA17_Chr3g0109731 30.579 363 204 12 132 455 194 547 3.90e-33 132
Msa0840500 MtrunA17_Chr8g0370701 29.111 371 225 13 113 455 217 577 3.18e-32 129
Msa0840500 MtrunA17_Chr5g0433221 27.348 362 228 9 124 455 186 542 3.97e-32 129
Msa0840500 MtrunA17_Chr2g0292471 25.989 531 291 14 16 455 31 550 6.65e-32 128
Msa0840500 MtrunA17_Chr5g0396331 26.482 506 293 15 14 455 41 531 2.00e-31 126
Msa0840500 MtrunA17_Chr8g0370731 30.028 363 212 12 126 456 137 489 4.70e-31 125
Msa0840500 MtrunA17_Chr4g0068151 30.387 362 210 14 129 455 198 552 1.18e-30 124
Msa0840500 MtrunA17_Chr1g0157431 40.667 150 70 2 122 252 201 350 1.03e-29 121
Msa0840500 MtrunA17_Chr4g0028451 48.598 107 46 1 320 426 10 107 2.43e-28 108
Msa0840500 MtrunA17_Chr5g0406681 25.440 511 301 17 14 460 73 567 1.18e-23 103
Msa0840500 MtrunA17_Chr4g0004101 27.615 239 160 5 230 461 98 330 2.84e-22 97.4
Msa0840500 MtrunA17_Chr4g0004841 26.022 269 176 6 210 461 77 339 2.68e-20 91.7
Msa0840500 MtrunA17_Chr7g0252691 22.433 526 330 13 12 462 205 727 1.13e-19 92.0
Msa0840500 MtrunA17_Chr8g0377991 30.213 235 141 8 219 439 446 671 1.55e-15 79.3
Msa0840500 MtrunA17_Chr7g0270221 26.844 339 171 14 123 391 179 510 3.41e-14 75.1
Msa0840500 MtrunA17_Chr2g0329161 26.343 391 221 17 126 451 671 1059 9.09e-14 74.3
Msa0840500 MtrunA17_Chr1g0205711 31.515 165 106 4 219 379 407 568 2.55e-13 72.4
Msa0840500 MtrunA17_Chr4g0033141 25.255 392 225 17 125 451 674 1062 4.38e-13 72.0
Msa0840500 MtrunA17_Chr3g0121951 32.203 177 96 5 242 402 460 628 7.24e-13 70.9
Msa0840500 MtrunA17_Chr1g0160041 31.138 167 98 7 232 387 426 586 7.44e-13 70.9
Msa0840500 MtrunA17_Chr2g0334121 31.928 166 86 4 4 144 45 208 8.96e-13 67.4
Msa0840500 MtrunA17_Chr3g0121931 31.792 173 102 5 242 402 464 632 3.75e-12 68.6
Msa0840500 MtrunA17_Chr3g0124631 31.210 157 97 6 234 382 430 583 1.88e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840500 AT4G19010.1 55.758 495 179 5 4 458 64 558 0.0 535
Msa0840500 AT1G20510.1 44.196 491 231 6 4 454 49 536 1.86e-141 416
Msa0840500 AT1G20480.1 41.600 500 251 6 4 462 66 565 2.18e-129 386
Msa0840500 AT1G20500.1 41.483 499 249 6 4 462 55 550 9.48e-129 384
Msa0840500 AT4G05160.1 40.120 501 256 7 4 462 46 544 9.53e-127 379
Msa0840500 AT5G63380.1 40.369 488 248 6 4 454 69 550 6.98e-123 369
Msa0840500 AT5G38120.1 39.796 490 253 5 4 454 56 542 2.91e-118 357
Msa0840500 AT1G20510.2 42.723 426 201 6 4 389 49 471 4.70e-114 344
Msa0840500 AT3G21240.1 39.721 501 259 7 4 462 55 554 4.25e-105 323
Msa0840500 AT5G38120.3 38.528 462 242 5 4 426 56 514 3.16e-104 320
Msa0840500 AT1G20510.3 41.626 406 194 6 4 369 49 451 2.15e-103 316
Msa0840500 AT1G51680.1 41.107 506 250 9 4 462 57 561 2.13e-102 317
Msa0840500 AT1G65060.1 39.554 493 255 8 4 455 67 557 8.52e-102 315
Msa0840500 AT3G21230.1 37.177 503 269 8 4 460 65 566 2.45e-98 306
Msa0840500 AT1G62940.1 36.673 499 261 8 4 456 45 534 2.54e-92 290
Msa0840500 AT5G38120.4 37.647 425 223 5 4 389 56 477 1.26e-91 286
Msa0840500 AT5G38120.2 37.647 425 223 5 4 389 56 477 1.26e-91 286
Msa0840500 AT1G51680.3 40.552 471 232 9 3 426 56 525 1.65e-90 285
Msa0840500 AT3G21230.3 36.674 469 250 8 4 426 65 532 9.48e-87 276
Msa0840500 AT3G21240.2 37.907 430 224 7 4 391 55 483 2.39e-79 255
Msa0840500 AT3G21240.3 37.907 430 224 7 4 391 55 483 2.39e-79 255
Msa0840500 AT1G51680.2 38.851 435 218 9 4 391 57 490 5.37e-76 246
Msa0840500 AT3G21230.2 35.417 432 232 8 4 389 65 495 3.16e-74 242
Msa0840500 AT1G20490.2 36.870 377 193 7 4 338 55 428 1.44e-70 231
Msa0840500 AT1G20490.1 36.870 377 193 7 4 338 55 428 1.44e-70 231
Msa0840500 AT1G65060.2 36.919 409 215 8 4 371 67 473 3.32e-69 228
Msa0840500 AT3G48990.1 28.542 480 299 12 12 452 30 504 3.16e-43 159
Msa0840500 AT1G77240.1 32.533 375 204 14 123 459 182 545 4.14e-41 154
Msa0840500 AT1G21530.1 30.151 398 237 14 93 456 151 541 2.40e-39 149
Msa0840500 AT3G21230.4 30.028 363 207 8 4 320 65 426 1.58e-38 145
Msa0840500 AT1G21530.2 29.426 401 238 15 93 456 151 543 1.71e-38 147
Msa0840500 AT5G16370.1 30.495 364 214 12 124 456 184 539 4.05e-38 146
Msa0840500 AT1G65890.1 26.154 520 303 17 11 456 38 550 5.09e-38 146
Msa0840500 AT1G21540.1 30.833 360 214 11 132 459 194 550 3.52e-37 143
Msa0840500 AT1G65880.1 26.245 522 301 15 11 456 38 551 2.31e-36 141
Msa0840500 AT1G75960.1 30.084 359 221 11 124 455 183 538 4.13e-35 137
Msa0840500 AT5G16340.1 29.670 364 217 12 124 456 184 539 1.81e-34 135
Msa0840500 AT3G16910.1 29.288 379 234 11 109 456 181 556 3.91e-34 135
Msa0840500 AT1G30520.2 27.606 518 280 16 22 456 42 547 2.86e-33 132
Msa0840500 AT1G30520.1 27.606 518 280 16 22 456 42 547 2.86e-33 132
Msa0840500 AT1G66120.1 30.601 366 220 13 121 456 182 543 9.88e-33 131
Msa0840500 AT1G20560.2 30.495 364 209 13 126 456 110 462 2.64e-31 125
Msa0840500 AT1G20560.1 29.945 364 211 12 126 456 188 540 6.74e-31 125
Msa0840500 AT1G68270.1 27.596 366 206 11 121 455 182 519 1.04e-29 122
Msa0840500 AT2G17650.1 28.493 365 220 13 124 456 240 595 1.63e-28 119
Msa0840500 AT1G76290.1 27.721 487 289 19 25 455 52 531 3.86e-28 117
Msa0840500 AT3G16170.1 25.714 385 227 11 125 461 234 607 8.24e-28 117
Msa0840500 AT1G30520.3 27.126 435 237 15 22 389 42 463 1.59e-24 106
Msa0840500 AT1G30520.4 27.126 435 237 15 22 389 42 463 1.59e-24 106
Msa0840500 AT5G27600.1 30.255 314 157 11 123 377 259 569 5.61e-21 96.7
Msa0840500 AT5G36880.2 23.092 524 329 13 12 462 197 719 6.62e-21 96.3
Msa0840500 AT5G36880.6 23.092 524 329 13 12 462 147 669 7.03e-21 96.3
Msa0840500 AT5G36880.3 23.092 524 329 13 12 462 147 669 7.03e-21 96.3
Msa0840500 AT5G36880.5 23.092 524 329 13 12 462 147 669 7.03e-21 96.3
Msa0840500 AT5G36880.1 23.092 524 329 13 12 462 147 669 7.03e-21 96.3
Msa0840500 AT3G05970.1 31.288 163 105 4 219 377 410 569 3.63e-11 65.9
Msa0840500 AT1G77590.2 31.325 166 103 6 232 389 276 438 3.97e-11 65.5
Msa0840500 AT3G23790.1 28.723 188 113 6 226 400 452 631 4.75e-11 65.5
Msa0840500 AT1G77590.1 30.168 179 114 6 219 389 409 584 5.87e-11 65.1
Msa0840500 AT2G47240.4 30.682 176 116 5 219 391 318 490 9.30e-11 64.7

Find 230 sgRNAs with CRISPR-Local

Find 933 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCCTTATTGATTCCTCTTC+TGG 0.119793 5_4:+16240023 Msa0840500:intron
GGCTTCTGGTCTTCATAAAA+TGG 0.204210 5_4:+16240091 Msa0840500:CDS
ATGGGATAGTAAATTGAATT+TGG 0.204514 5_4:-16230831 None:intergenic
ATGGGATAGTAAATTGAATT+TGG 0.204514 5_4:-16240149 None:intergenic
TTGACATTGATGAGACTATT+AGG 0.209216 5_4:+16240684 Msa0840500:CDS
TATCAAATACAAGGGCTTTC+AGG 0.229499 5_4:+16232270 Msa0840500:five_prime_UTR
TATCAAATACAAGGGCTTTC+AGG 0.229499 5_4:+16241588 Msa0840500:CDS
TTGACATTGACGAGACTATT+AGG 0.230432 5_4:+16231366 Msa0840500:five_prime_UTR
GGCTTCTGGTCTTCACAAAA+TGG 0.235818 5_4:+16230773 Msa0840500:five_prime_UTR
TATTGCCATGGTTGAGCTTT+TGG 0.243376 5_4:+16240517 Msa0840500:CDS
TACTATCCCATTGTACTATT+AGG 0.254485 5_4:+16230843 Msa0840500:five_prime_UTR
TACTATCCCATTGTACTATT+AGG 0.254485 5_4:+16240161 Msa0840500:CDS
CTTAGGATACTTGAATAATA+AGG 0.261353 5_4:+16232141 Msa0840500:intron
CTTAGGATACTTGAATAATA+AGG 0.261353 5_4:+16241459 Msa0840500:intron
CCCTTATTGATTCCTCTTCT+GGG 0.272214 5_4:+16240024 Msa0840500:CDS
TTGCCGATGTTCCATTTATA+TGG 0.273927 5_4:+16231281 Msa0840500:five_prime_UTR
TTGCCGATGTTCCATTTATA+TGG 0.273927 5_4:+16240599 Msa0840500:CDS
ACCTGTATAAAATCAACATT+AGG 0.277352 5_4:-16231560 None:intergenic
ATAGTGGATGTCGCCGTTAC+AGG 0.280831 5_4:+16232418 Msa0840500:five_prime_UTR
ATAGTGGATGTCGCCGTTAC+AGG 0.280831 5_4:+16241774 Msa0840500:CDS
AGAGAGATAAACCATATAAA+TGG 0.302429 5_4:-16240610 None:intergenic
ACCTGTATAAAATCAACATT+AGG 0.307157 5_4:-16240878 None:intergenic
AGAGCGATAAACCATATAAA+TGG 0.308944 5_4:-16231292 None:intergenic
GCCCTTATTGATTCCTCATC+TGG 0.313200 5_4:+16230705 Msa0840500:five_prime_UTR
TGCTACGGGATTATTGTCAT+TGG 0.327188 5_4:+16231316 Msa0840500:five_prime_UTR
TGCTACGGGATTATTGTCAT+TGG 0.327188 5_4:+16240634 Msa0840500:CDS
GGGTTATCATAGCATGAAAT+TGG 0.334584 5_4:+16242233 Msa0840500:three_prime_UTR
TGGAGGCAAAAGTGGTATAT+TGG 0.338544 5_4:+16241117 Msa0840500:CDS
TTAGTCAAATCAATGGCTTC+TGG 0.343881 5_4:+16230759 Msa0840500:five_prime_UTR
TTAGTCAAATCAATGGCTTC+TGG 0.343881 5_4:+16240077 Msa0840500:CDS
GAAATGCCTTAGAGTTTAGA+AGG 0.348615 5_4:-16232848 None:intergenic
AGCAGTTTCTGAGTTGCTTT+CGG 0.356180 5_4:-16232823 None:intergenic
AGCAGTTTCTGAGTTGCTTT+CGG 0.356180 5_4:-16242180 None:intergenic
ACGGCGACATCCACTATTTC+AGG 0.369334 5_4:-16232412 None:intergenic
ACGGCGACATCCACTATTTC+AGG 0.369334 5_4:-16241768 None:intergenic
TGCATGCCTTAGAGTTTAGA+AGG 0.372200 5_4:-16242205 None:intergenic
ATGACTGAGTCGGGTGCATT+AGG 0.374967 5_4:+16231711 Msa0840500:five_prime_UTR
ATGACTGAGTCGGGTGCATT+AGG 0.374967 5_4:+16241029 Msa0840500:CDS
CTCCCCAGCTTCTTCATCCT+TGG 0.375919 5_4:-16241892 None:intergenic
CAGGCAGAAGTGGTGAGCTT+TGG 0.376467 5_4:+16231844 Msa0840500:five_prime_UTR
CAGGCAGAAGTGGTGAGCTT+TGG 0.376467 5_4:+16241162 Msa0840500:CDS
TGACATTGATGAGACTATTA+GGG 0.379738 5_4:+16240685 Msa0840500:CDS
TTCCAGATGAGGAATCAATA+AGG 0.379840 5_4:-16230707 None:intergenic
AACGATACAACGTCGAGAAA+AGG 0.386540 5_4:-16230651 None:intergenic
TGCTTGCCTTCTAAACTCTA+AGG 0.391570 5_4:+16232842 Msa0840500:five_prime_UTR
TGCTTGCCTTCTAAACTCTA+AGG 0.391570 5_4:+16242199 Msa0840500:CDS
GTGTCTTCTTGTTTAATAAC+CGG 0.393788 5_4:-16231107 None:intergenic
GGAGATTCCAGTGGCATTTG+TGG 0.394931 5_4:+16241911 Msa0840500:CDS
TCCCAGAAGAGGAATCAATA+AGG 0.395051 5_4:-16240025 None:intergenic
ACTTTGCGAACCTTCTTGAA+TGG 0.396762 5_4:-16232755 None:intergenic
ACTTTGCGAACCTTCTTGAA+TGG 0.396762 5_4:-16242112 None:intergenic
TGACATTGACGAGACTATTA+GGG 0.397999 5_4:+16231367 Msa0840500:five_prime_UTR
GGAGATTCCAGTGGGATTTG+TGG 0.412173 5_4:+16232555 Msa0840500:five_prime_UTR
GCTACGGGATTATTGTCATT+GGG 0.419178 5_4:+16231317 Msa0840500:five_prime_UTR
GCTACGGGATTATTGTCATT+GGG 0.419178 5_4:+16240635 Msa0840500:CDS
GTGTGTACTATTGTAAATTC+CGG 0.423833 5_4:-16230604 None:intergenic
TGGTTTATCTCTCTTTGCTA+CGG 0.427906 5_4:+16240619 Msa0840500:CDS
TTCAGAAAAGTGAATGGTAC+TGG 0.430727 5_4:-16230506 None:intergenic
AAACAAAGTTACCAGAAATC+AGG 0.431755 5_4:-16231073 None:intergenic
AAACAAAGTTACCAGAAATC+AGG 0.431755 5_4:-16240391 None:intergenic
AACTCTAAGGCATGCATAGT+GGG 0.435803 5_4:+16242212 Msa0840500:exon
GTTAAGAAATTAGAACCATT+AGG 0.435854 5_4:+16230981 Msa0840500:five_prime_UTR
GTTAAGAAATTAGAACCATT+AGG 0.435854 5_4:+16240299 Msa0840500:intron
TAACAACTTTGAGTAAGAAA+TGG 0.436153 5_4:-16230733 None:intergenic
TAACAACTTTGAGTAAGAAA+TGG 0.436153 5_4:-16240051 None:intergenic
TGGTTTATCGCTCTTTGCTA+CGG 0.436373 5_4:+16231301 Msa0840500:five_prime_UTR
TGGAGGCAAAAGTGGTAGAT+TGG 0.438591 5_4:+16231799 Msa0840500:five_prime_UTR
CCTGTATAAAATCAACATTA+GGG 0.441453 5_4:-16231559 None:intergenic
AAAGATGGTTGGCTACATAC+TGG 0.442873 5_4:+16232187 Msa0840500:five_prime_UTR
AAAGATGGTTGGCTACATAC+TGG 0.442873 5_4:+16241505 Msa0840500:CDS
GCTGTCAATGCCGACAATAT+CGG 0.443469 5_4:-16240749 None:intergenic
GGTTTATCTCTCTTTGCTAC+GGG 0.445435 5_4:+16240620 Msa0840500:CDS
GAAGCCATTGATTTGACTAA+AGG 0.445775 5_4:-16230756 None:intergenic
GAAGCCATTGATTTGACTAA+AGG 0.445775 5_4:-16240074 None:intergenic
CAAAGCTCACCACTTCTGCC+TGG 0.447396 5_4:-16231843 None:intergenic
CAAAGCTCACCACTTCTGCC+TGG 0.447396 5_4:-16241161 None:intergenic
TATCGACTTCGTTGCTAAGC+AGG 0.451419 5_4:+16241971 Msa0840500:CDS
TATCGATTTCGTTGCTAAGC+AGG 0.452311 5_4:+16232615 Msa0840500:five_prime_UTR
TCTTGTTCCACCGATATTGT+CGG 0.455719 5_4:+16240739 Msa0840500:CDS
GTTACCTTTAGTCAAATCAA+TGG 0.458910 5_4:+16230752 Msa0840500:five_prime_UTR
GTTACCTTTAGTCAAATCAA+TGG 0.458910 5_4:+16240070 Msa0840500:CDS
AAAGCTCACCACTTCTGCCT+GGG 0.459009 5_4:-16231842 None:intergenic
AAAGCTCACCACTTCTGCCT+GGG 0.459009 5_4:-16241160 None:intergenic
ACGAAATCGATAACATCCTT+TGG 0.459388 5_4:-16232604 None:intergenic
ACGAAGTCGATAACATCCTT+TGG 0.459798 5_4:-16241960 None:intergenic
GGATTTGTGGTCAAGAAGGT+TGG 0.460966 5_4:+16232568 Msa0840500:five_prime_UTR
GCATTTGTGGTCAAGAAAGT+TGG 0.466162 5_4:+16241924 Msa0840500:CDS
ACGATACAACGTCGAGAAAA+GGG 0.466770 5_4:-16230650 None:intergenic
TTTCGCAACTATTCTTCACT+AGG 0.467126 5_4:+16231759 Msa0840500:five_prime_UTR
TTTCGCAACTATTCTTCACT+AGG 0.467126 5_4:+16241077 Msa0840500:CDS
CCTGTATAAAATCAACATTA+GGG 0.467794 5_4:-16240877 None:intergenic
TTCTGTGCCAGAAAATGAAA+AGG 0.468038 5_4:+16231016 Msa0840500:five_prime_UTR
TTCTGTGCCAGAAAATGAAA+AGG 0.468038 5_4:+16240334 Msa0840500:CDS
AATCAACATTAGGGAAAGCT+TGG 0.471169 5_4:-16231550 None:intergenic
TGTTGTTCCACCGATATTGT+CGG 0.473377 5_4:+16231421 Msa0840500:five_prime_UTR
GCTTCTGGTCTTCATAAAAT+GGG 0.474868 5_4:+16240092 Msa0840500:CDS
AATCAACATTAGGGAGAGCT+TGG 0.474883 5_4:-16240868 None:intergenic
GGTTTATCGCTCTTTGCTAC+GGG 0.477009 5_4:+16231302 Msa0840500:five_prime_UTR
ATAACACCTAATAGTACAAT+GGG 0.478275 5_4:-16230849 None:intergenic
ATAACACCTAATAGTACAAT+GGG 0.478275 5_4:-16240167 None:intergenic
GCGAAGGCAAAGGGTGCAAA+TGG 0.480895 5_4:+16231452 Msa0840500:five_prime_UTR
GCTTCTGGTCTTCACAAAAT+GGG 0.481029 5_4:+16230774 Msa0840500:five_prime_UTR
TCCAGATGAGGAATCAATAA+GGG 0.481082 5_4:-16230706 None:intergenic
TTCTTGACCACAAATGCCAC+TGG 0.484108 5_4:-16241918 None:intergenic
TCATAGAAATCTTATTGCTA+TGG 0.487900 5_4:+16231187 Msa0840500:five_prime_UTR
AAAGTGGTATATTGGAATAG+TGG 0.491834 5_4:+16241125 Msa0840500:CDS
ATATCATCACTCACCCTCCT+TGG 0.494964 5_4:+16230568 Msa0840500:five_prime_UTR
ATTTCATCAACACTACTAAG+AGG 0.496577 5_4:-16230903 None:intergenic
ATTTCATCAACACTACTAAG+AGG 0.496577 5_4:-16240221 None:intergenic
GAAAGAATTTATCAAATACA+AGG 0.497893 5_4:+16232261 Msa0840500:five_prime_UTR
GAAAGAATTTATCAAATACA+AGG 0.497893 5_4:+16241579 Msa0840500:CDS
GGGTCGGTCGGAAGGCTCCT+AGG 0.498932 5_4:-16230630 None:intergenic
CACAGACCTTGGAATCTTGT+CGG 0.500104 5_4:-16232786 None:intergenic
CACAGACCTTGGAATCTTGT+CGG 0.500104 5_4:-16242143 None:intergenic
TGTTGATGAAATTCGTAAGC+AGG 0.500410 5_4:+16230914 Msa0840500:five_prime_UTR
TGTTGATGAAATTCGTAAGC+AGG 0.500410 5_4:+16240232 Msa0840500:CDS
GTTCTTCAATCGTTGTAATG+AGG 0.501221 5_4:+16240657 Msa0840500:CDS
CCCAGAAGAGGAATCAATAA+GGG 0.505561 5_4:-16240024 None:intergenic
AAACTCTAAGGCATGCATAG+TGG 0.507873 5_4:+16242211 Msa0840500:exon
GAAATAATAGGAATGCCTAA+TGG 0.507899 5_4:-16230996 None:intergenic
GAAATAATAGGAATGCCTAA+TGG 0.507899 5_4:-16240314 None:intergenic
GCTGTCAACGCCGACAATAT+CGG 0.507999 5_4:-16231431 None:intergenic
ATCTTCCCAGTCACAGACCT+TGG 0.509926 5_4:-16232797 None:intergenic
ATCTTCCCAGTCACAGACCT+TGG 0.509926 5_4:-16242154 None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG 0.511530 5_4:+16231478 Msa0840500:five_prime_UTR
AGTGGGATTTGTGGTCAAGA+AGG 0.512122 5_4:+16232564 Msa0840500:five_prime_UTR
AACACAGCTTCTAAATCAGC+AGG 0.514041 5_4:-16232379 None:intergenic
AACACAGCTTCTAAATCAGC+AGG 0.514041 5_4:-16241735 None:intergenic
GTTTATGGAATGACTGAGTC+GGG 0.516171 5_4:+16231702 Msa0840500:five_prime_UTR
GTTTATGGAATGACTGAGTC+GGG 0.516171 5_4:+16241020 Msa0840500:CDS
AAAGTGGTAGATTGGAATAG+TGG 0.520566 5_4:+16231807 Msa0840500:five_prime_UTR
GGTTTATGGAATGACTGAGT+CGG 0.521041 5_4:+16231701 Msa0840500:intron
GGTTTATGGAATGACTGAGT+CGG 0.521041 5_4:+16241019 Msa0840500:intron
AGTGGTGAGCTTTGGTTGAG+AGG 0.521413 5_4:+16241170 Msa0840500:CDS
ACAATAGTACACACTCTCCT+AGG 0.522782 5_4:+16230613 Msa0840500:five_prime_UTR
GTGGTGAGCTTTGGTTGAGA+GGG 0.522929 5_4:+16231853 Msa0840500:five_prime_UTR
AGTGCGAAGGATGAAGAAGC+TGG 0.523191 5_4:+16232532 Msa0840500:intron
AGTGCCAAGGATGAAGAAGC+TGG 0.523191 5_4:+16241888 Msa0840500:intron
AAGATTCCAAGGTCTGTGAC+TGG 0.524838 5_4:+16232791 Msa0840500:five_prime_UTR
AAGATTCCAAGGTCTGTGAC+TGG 0.524838 5_4:+16242148 Msa0840500:CDS
ATGTCGACAATTGATAAAGA+TGG 0.526979 5_4:+16232172 Msa0840500:five_prime_UTR
ATGTCGACAATTGATAAAGA+TGG 0.526979 5_4:+16241490 Msa0840500:CDS
TCCAAACATGGAGGCAAAAG+TGG 0.536470 5_4:+16231791 Msa0840500:five_prime_UTR
TCCAAACATGGAGGCAAAAG+TGG 0.536470 5_4:+16241109 Msa0840500:CDS
TCATAGAAATCTTATTGCCA+TGG 0.541662 5_4:+16240505 Msa0840500:CDS
TTCGCAACTATTCTTCACTA+GGG 0.541708 5_4:+16231760 Msa0840500:five_prime_UTR
TTCGCAACTATTCTTCACTA+GGG 0.541708 5_4:+16241078 Msa0840500:CDS
GCAGGTTGCTCCATTCAAGA+AGG 0.544629 5_4:+16242102 Msa0840500:intron
GCAGGTTGCTCCATTCAAGA+AGG 0.547112 5_4:+16232745 Msa0840500:intron
CGAGAAAAGGGTCGGTCGGA+AGG 0.547817 5_4:-16230638 None:intergenic
GCGTTGACAGCGAAGGCAAA+GGG 0.548766 5_4:+16231443 Msa0840500:five_prime_UTR
AGTGGTGAGCTTTGGTTGAG+AGG 0.549036 5_4:+16231852 Msa0840500:five_prime_UTR
TAGTGGATGTCGCCGTTACA+GGG 0.551826 5_4:+16232419 Msa0840500:five_prime_UTR
TAGTGGATGTCGCCGTTACA+GGG 0.551826 5_4:+16241775 Msa0840500:CDS
GTGCGAAGGATGAAGAAGCT+GGG 0.553492 5_4:+16232533 Msa0840500:intron
GTGCCAAGGATGAAGAAGCT+GGG 0.553492 5_4:+16241889 Msa0840500:intron
TTCTTGACCACAAATCCCAC+TGG 0.554243 5_4:-16232562 None:intergenic
CACAAAATGGGAGTTTCACA+AGG 0.554728 5_4:+16230786 Msa0840500:five_prime_UTR
GGCGTTGACAGCGAAGGCAA+AGG 0.556421 5_4:+16231442 Msa0840500:five_prime_UTR
CATAACACCTAATAGTACAA+TGG 0.557647 5_4:-16230850 None:intergenic
CATAACACCTAATAGTACAA+TGG 0.557647 5_4:-16240168 None:intergenic
TGGAAGTGTACTTTCTCCAA+AGG 0.559244 5_4:+16241944 Msa0840500:CDS
GCATTGACAGCGAAGGCAAA+GGG 0.561700 5_4:+16240761 Msa0840500:CDS
ACACTACTAAGAGGATTCAA+TGG 0.565007 5_4:-16230894 None:intergenic
ACACTACTAAGAGGATTCAA+TGG 0.565007 5_4:-16240212 None:intergenic
GGCATTGACAGCGAAGGCAA+AGG 0.570107 5_4:+16240760 Msa0840500:CDS
ATTTGATAAATTCTTTCAAG+CGG 0.572308 5_4:-16232255 None:intergenic
ATTTGATAAATTCTTTCAAG+CGG 0.572308 5_4:-16241573 None:intergenic
AGAGGGCCTTCAATTATGAA+AGG 0.572900 5_4:+16231870 Msa0840500:five_prime_UTR
AGAGGTCCTTCAATTATGAA+AGG 0.572900 5_4:+16241188 Msa0840500:CDS
AAGCTCACCACTTCTGCCTG+GGG 0.573330 5_4:-16231841 None:intergenic
AAGCTCACCACTTCTGCCTG+GGG 0.573330 5_4:-16241159 None:intergenic
CGACAATTGATAAAGATGGT+TGG 0.573781 5_4:+16232176 Msa0840500:five_prime_UTR
CGACAATTGATAAAGATGGT+TGG 0.573781 5_4:+16241494 Msa0840500:CDS
AGATTCCAAGGTCTGTGACT+GGG 0.575854 5_4:+16232792 Msa0840500:five_prime_UTR
AGATTCCAAGGTCTGTGACT+GGG 0.575854 5_4:+16242149 Msa0840500:CDS
AAAGAATTTATCAAATACAA+GGG 0.580755 5_4:+16232262 Msa0840500:five_prime_UTR
AAAGAATTTATCAAATACAA+GGG 0.580755 5_4:+16241580 Msa0840500:CDS
CATAAAATGGGAGTTTCACA+AGG 0.583635 5_4:+16240104 Msa0840500:CDS
CTATTAGGTGTTATGTACCT+AGG 0.587403 5_4:+16230858 Msa0840500:five_prime_UTR
CTATTAGGTGTTATGTACCT+AGG 0.587403 5_4:+16240176 Msa0840500:CDS
AAACCATATAAATGGAACAT+CGG 0.588130 5_4:-16231284 None:intergenic
TTGCAGAGTTTGAGACAGGT+CGG 0.589428 5_4:+16231482 Msa0840500:five_prime_UTR
GGTACTACTGGTGTGAGCAA+AGG 0.591807 5_4:+16231152 Msa0840500:five_prime_UTR
GGTACTACTGGTGTGAGCAA+AGG 0.591807 5_4:+16240470 Msa0840500:CDS
ATTCAAGAAGGTTCGCAAAG+TGG 0.594840 5_4:+16232757 Msa0840500:five_prime_UTR
ATTCAAGAAGGTTCGCAAAG+TGG 0.594840 5_4:+16242114 Msa0840500:CDS
AAACCATATAAATGGAACAT+CGG 0.598356 5_4:-16240602 None:intergenic
AGAAATGGAAGTCCCAGAAG+AGG 0.600253 5_4:-16240036 None:intergenic
AGGGCTAAAACCCCATCATG+AGG 0.601023 5_4:-16230687 None:intergenic
TTCATATACTTACCCTGTAA+CGG 0.602675 5_4:-16232431 None:intergenic
TTCATATACTTACCCTGTAA+CGG 0.602675 5_4:-16241787 None:intergenic
GGTTCGCGCGAACCAATTCG+CGG 0.609920 5_4:-16230485 None:intergenic
AGTTTCTGAGTTGCTTTCGG+AGG 0.613327 5_4:-16232820 None:intergenic
AGTTTCTGAGTTGCTTTCGG+AGG 0.613327 5_4:-16242177 None:intergenic
AGGGTTGTTAGCTCCAAACA+TGG 0.614345 5_4:+16231779 Msa0840500:five_prime_UTR
AGGGTTGTTAGCTCCAAACA+TGG 0.614345 5_4:+16241097 Msa0840500:CDS
TGGAAGTGTACTATCTCCAA+AGG 0.615514 5_4:+16232588 Msa0840500:five_prime_UTR
TGCGAAGGATGAAGAAGCTG+GGG 0.623968 5_4:+16232534 Msa0840500:five_prime_UTR
TGCCAAGGATGAAGAAGCTG+GGG 0.626607 5_4:+16241890 Msa0840500:CDS
TCGGGTGCATTAGGAGCATG+CGG 0.630001 5_4:+16231720 Msa0840500:five_prime_UTR
TCGGGTGCATTAGGAGCATG+CGG 0.630001 5_4:+16241038 Msa0840500:CDS
ATTGTCGGCGTTGACAGCGA+AGG 0.633730 5_4:+16231436 Msa0840500:five_prime_UTR
AGAAATGGAAGTTCCAGATG+AGG 0.636066 5_4:-16230718 None:intergenic
GTCAATGCCGACAATATCGG+TGG 0.636107 5_4:-16240746 None:intergenic
AGCTCACCACTTCTGCCTGG+GGG 0.642781 5_4:-16231840 None:intergenic
AGCTCACCACTTCTGCCTGG+GGG 0.642781 5_4:-16241158 None:intergenic
TCTTCACCGACAAGATTCCA+AGG 0.652098 5_4:+16232780 Msa0840500:five_prime_UTR
TCTTCACCGACAAGATTCCA+AGG 0.652098 5_4:+16242137 Msa0840500:CDS
GGGCTAAAACCCCATCATGA+GGG 0.653343 5_4:-16230686 None:intergenic
CGTAAGCAGGTTAATGACTG+TGG 0.656452 5_4:+16230927 Msa0840500:five_prime_UTR
ACGTCGAGAAAAGGGTCGGT+CGG 0.657613 5_4:-16230642 None:intergenic
ATTGTCGGCATTGACAGCGA+AGG 0.665271 5_4:+16240754 Msa0840500:CDS
GTCAACGCCGACAATATCGG+TGG 0.668897 5_4:-16231428 None:intergenic
GTTCTACAATCGTTGTAATG+CGG 0.673134 5_4:+16231339 Msa0840500:five_prime_UTR
ACAGCTTCTAAATCAGCAGG+AGG 0.675381 5_4:-16232376 None:intergenic
ACAGCTTCTAAATCAGCAGG+AGG 0.675381 5_4:-16241732 None:intergenic
CCTCGCCAAAAGCTCAACCA+TGG 0.675519 5_4:-16240522 None:intergenic
GAAGCTGGGGAGATTCCAGT+GGG 0.676967 5_4:+16232547 Msa0840500:five_prime_UTR
TTGGAAGTAGAAGCAAAACA+AGG 0.677547 5_4:-16230812 None:intergenic
AGAAGCTGGGGAGATTCCAG+TGG 0.677976 5_4:+16232546 Msa0840500:five_prime_UTR
ACTCTAAGGCATGCATAGTG+GGG 0.681056 5_4:+16242213 Msa0840500:exon
TTGGAAGTAGAAGCAAAACA+AGG 0.686472 5_4:-16240130 None:intergenic
TACAACGTCGAGAAAAGGGT+CGG 0.686772 5_4:-16230646 None:intergenic
ATGGTGTAACAACAGCACCT+AGG 0.700872 5_4:-16230875 None:intergenic
ATGGTGTAACAACAGCACCT+AGG 0.700872 5_4:-16240193 None:intergenic
AGAAGCTGGGGAGATTCCAG+TGG 0.713242 5_4:+16241902 Msa0840500:CDS
AAAATGGGAGTTTCACAAGG+TGG 0.715872 5_4:+16240107 Msa0840500:CDS
GTTGTTAGCTCCAAACATGG+AGG 0.741487 5_4:+16231782 Msa0840500:five_prime_UTR
GTTGTTAGCTCCAAACATGG+AGG 0.741487 5_4:+16241100 Msa0840500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATTTATGAATAACA+TGG + chr5_4:16233048-16233067 Msa0840500:intron 10.0%
!!! ATATTAAGTTTAATTTTTGT+TGG + chr5_4:16233486-16233505 Msa0840500:intron 10.0%
!! TTAATTTAAACAAACTAATA+TGG + chr5_4:16233598-16233617 Msa0840500:intron 10.0%
!!! TTTTAGTAATAATAATGATA+AGG - chr5_4:16233664-16233683 None:intergenic 10.0%
!! AATAATACAACTTAAAAAAA+GGG - chr5_4:16239268-16239287 None:intergenic 10.0%
!! TAATAATACAACTTAAAAAA+AGG - chr5_4:16239269-16239288 None:intergenic 10.0%
!!! ATGTAAAATTGTTTCTTTTT+AGG + chr5_4:16231680-16231699 Msa0840500:intron 15.0%
!! GTTTGATTAATAATTTCAAT+TGG - chr5_4:16232107-16232126 None:intergenic 15.0%
!! AAAGAATTTATCAAATACAA+GGG + chr5_4:16232262-16232281 Msa0840500:five_prime_UTR 15.0%
!! TTATATTTAAATGTCTAAAG+AGG - chr5_4:16232482-16232501 None:intergenic 15.0%
!!! TTATTTTTTTACAACTATTG+AGG - chr5_4:16232986-16233005 None:intergenic 15.0%
!!! TAAGGATTTAATTTATCTTT+TGG - chr5_4:16233646-16233665 None:intergenic 15.0%
!!! AATTCAAAAGTATATGTTTA+AGG + chr5_4:16233900-16233919 Msa0840500:intron 15.0%
!!! ATTTAAAATAGATTCAATAG+AGG + chr5_4:16233935-16233954 Msa0840500:intron 15.0%
!! AAATCTAAACATTTATCTTT+CGG - chr5_4:16234047-16234066 None:intergenic 15.0%
!! ATAAAATATATCACAACATA+AGG + chr5_4:16237019-16237038 Msa0840500:intron 15.0%
!!! TTTTATTCATTTTGATTTTC+TGG + chr5_4:16238094-16238113 Msa0840500:intron 15.0%
!! AATGAAAAAGAAATTAAAGT+GGG - chr5_4:16238887-16238906 None:intergenic 15.0%
!! AAATGAAAAAGAAATTAAAG+TGG - chr5_4:16238888-16238907 None:intergenic 15.0%
!! ACAAATAGATTATGAATTAA+CGG + chr5_4:16239308-16239327 Msa0840500:intron 15.0%
!!! ATGTAAAATTGTTTCTTTTT+AGG + chr5_4:16231680-16231699 Msa0840500:intron 15.0%
!!! AAAAAAATCTGCATTTTTTA+TGG + chr5_4:16231895-16231914 Msa0840500:intron 15.0%
!! GTTTGATTAATAATTTCAAT+TGG - chr5_4:16232107-16232126 None:intergenic 15.0%
!! AAAGAATTTATCAAATACAA+GGG + chr5_4:16232262-16232281 Msa0840500:five_prime_UTR 15.0%
!! TTATATTTAAATGTCTAAAG+AGG - chr5_4:16232482-16232501 None:intergenic 15.0%
!!! TCTAATTTCTTAACATTTTC+AGG - chr5_4:16230975-16230994 None:intergenic 20.0%
!! AAACAACATTATTTGAATGA+TGG - chr5_4:16231634-16231653 None:intergenic 20.0%
!!! TGTTTTCCTAGATTTTTTTA+AGG + chr5_4:16231649-16231668 Msa0840500:intron 20.0%
!!! ATTGTTTCTTTTTAGGTTTA+TGG + chr5_4:16231687-16231706 Msa0840500:intron 20.0%
!!! TTTTTACCTTTCATAATTGA+AGG - chr5_4:16231879-16231898 None:intergenic 20.0%
!! TAAATACTAAAAGGATAACA+TGG + chr5_4:16231932-16231951 Msa0840500:intron 20.0%
!!! AACTTTTTCCTTAATTTCTT+AGG + chr5_4:16232124-16232143 Msa0840500:intron 20.0%
!!! ATTGTTTATTTTGATCAAGA+TGG + chr5_4:16232214-16232233 Msa0840500:five_prime_UTR 20.0%
!! ATTTGATAAATTCTTTCAAG+CGG - chr5_4:16232258-16232277 None:intergenic 20.0%
!! GAAAGAATTTATCAAATACA+AGG + chr5_4:16232261-16232280 Msa0840500:five_prime_UTR 20.0%
!!! AAATTTTAACCCTTTTTTGT+TGG + chr5_4:16232723-16232742 Msa0840500:intron 20.0%
!!! ATATATTTTTTGTGCTTCAA+AGG + chr5_4:16233194-16233213 Msa0840500:intron 20.0%
!! ATTAACTTAAAAGATTTCAG+TGG - chr5_4:16233292-16233311 None:intergenic 20.0%
!! GTTAATTATTCGTAACAAAT+TGG + chr5_4:16233306-16233325 Msa0840500:intron 20.0%
!!! TTAGTTTTTTCATACCAATA+AGG + chr5_4:16233334-16233353 Msa0840500:intron 20.0%
!! ATGATATAACATTGAATGAT+TGG - chr5_4:16233763-16233782 None:intergenic 20.0%
!! AATAATAGCTGATAAATCTT+GGG - chr5_4:16234324-16234343 None:intergenic 20.0%
!! TAATAATAGCTGATAAATCT+TGG - chr5_4:16234325-16234344 None:intergenic 20.0%
!! ATAGACTTCGTTATATTATT+GGG - chr5_4:16234808-16234827 None:intergenic 20.0%
!! AATAGACTTCGTTATATTAT+TGG - chr5_4:16234809-16234828 None:intergenic 20.0%
!!! TTAAATTAGCTTTGAAAGAT+TGG - chr5_4:16235555-16235574 None:intergenic 20.0%
!! ATGGAAAACATATTTATTTG+TGG + chr5_4:16235978-16235997 Msa0840500:intron 20.0%
!! AAAACATATTTATTTGTGGT+CGG + chr5_4:16235982-16236001 Msa0840500:intron 20.0%
!! AATAAATGATTAACAGTTTC+CGG - chr5_4:16236476-16236495 None:intergenic 20.0%
!! GAAAGAAATAACAAATTATC+CGG - chr5_4:16236840-16236859 None:intergenic 20.0%
!!! GGATAATTTGTTATTTCTTT+CGG + chr5_4:16236839-16236858 Msa0840500:intron 20.0%
!!! GAAATTTGAAAAGTATTTTG+AGG - chr5_4:16237176-16237195 None:intergenic 20.0%
!!! AACATAATTTTCAGCTTATT+TGG + chr5_4:16237275-16237294 Msa0840500:intron 20.0%
!!! ATTTCAAACAATTTTTGAGT+TGG + chr5_4:16237336-16237355 Msa0840500:intron 20.0%
!!! TTTTTTAAACCTCTCAAAAA+AGG - chr5_4:16237540-16237559 None:intergenic 20.0%
!!! TTTTTTAAACCTCTCAAAAA+AGG - chr5_4:16237540-16237559 None:intergenic 20.0%
!! ATACCATTAATAAGTTATCA+TGG - chr5_4:16238035-16238054 None:intergenic 20.0%
!! ACTGTATATTTGAAAATTCA+AGG - chr5_4:16238188-16238207 None:intergenic 20.0%
!! TGATTTAGTCCTAAAAAATA+GGG + chr5_4:16238261-16238280 Msa0840500:intron 20.0%
!!! TATTTTCAAGGATTTATGAA+AGG - chr5_4:16238419-16238438 None:intergenic 20.0%
!! TTCAATGATTTATGAGATTA+TGG - chr5_4:16238652-16238671 None:intergenic 20.0%
!! TCTCATAAATCATTGAAAAT+AGG + chr5_4:16238655-16238674 Msa0840500:intron 20.0%
!! ATGAAAAAGAAATTAAAGTG+GGG - chr5_4:16238886-16238905 None:intergenic 20.0%
!!! CATAGATAAAGTAACATTTT+TGG - chr5_4:16238912-16238931 None:intergenic 20.0%
!! ATGGAACAATGAAAAAAAAA+TGG - chr5_4:16238963-16238982 None:intergenic 20.0%
!! ACTGACATTAAATATATTGT+CGG - chr5_4:16239096-16239115 None:intergenic 20.0%
!! TTGTAAACAACATTGTATTT+AGG - chr5_4:16239211-16239230 None:intergenic 20.0%
!!! TAAATACAATGTTGTTTACA+AGG + chr5_4:16239210-16239229 Msa0840500:intron 20.0%
!! ATAATCTGTTTGGAAATATT+TGG - chr5_4:16239588-16239607 None:intergenic 20.0%
!! AAATATTTCCAAACAGATTA+TGG + chr5_4:16239587-16239606 Msa0840500:intron 20.0%
!! AAATAAGAATGCTCTTATAA+AGG - chr5_4:16239765-16239784 None:intergenic 20.0%
!!! TCTAATTTCTTAACATTTTC+AGG - chr5_4:16230975-16230994 None:intergenic 20.0%
!!! AATAAGACTATTTTATTCTG+AGG - chr5_4:16231591-16231610 None:intergenic 20.0%
!! AAACAACATTATTTGAATGA+TGG - chr5_4:16231634-16231653 None:intergenic 20.0%
!!! TGTTTTCCTAGATTTTTTTA+AGG + chr5_4:16231649-16231668 Msa0840500:intron 20.0%
!!! ATTGTTTCTTTTTAGGTTTA+TGG + chr5_4:16231687-16231706 Msa0840500:intron 20.0%
!!! TTTTTACCTTTCATAATTGA+AGG - chr5_4:16231879-16231898 None:intergenic 20.0%
!! TAAATACTAAAAGGATAACA+TGG + chr5_4:16231932-16231951 Msa0840500:intron 20.0%
!!! AACTTTTTCCTTAATTTCTT+AGG + chr5_4:16232124-16232143 Msa0840500:intron 20.0%
!!! ATTGTTTATTTTGATCAAGA+TGG + chr5_4:16232214-16232233 Msa0840500:five_prime_UTR 20.0%
!! ATTTGATAAATTCTTTCAAG+CGG - chr5_4:16232258-16232277 None:intergenic 20.0%
!! GAAAGAATTTATCAAATACA+AGG + chr5_4:16232261-16232280 Msa0840500:five_prime_UTR 20.0%
!!! AATTTTAACCCTTTTTTTCT+TGG + chr5_4:16242080-16242099 Msa0840500:intron 20.0%
!! TTGATTTTCAGAAAAGTGAA+TGG - chr5_4:16230515-16230534 None:intergenic 25.0%
!!! TTCACTTTTCTGAAAATCAA+TGG + chr5_4:16230515-16230534 Msa0840500:five_prime_UTR 25.0%
! TAACAACTTTGAGTAAGAAA+TGG - chr5_4:16230736-16230755 None:intergenic 25.0%
! ATGGGATAGTAAATTGAATT+TGG - chr5_4:16230834-16230853 None:intergenic 25.0%
! ATAACACCTAATAGTACAAT+GGG - chr5_4:16230852-16230871 None:intergenic 25.0%
! GTTAAGAAATTAGAACCATT+AGG + chr5_4:16230981-16231000 Msa0840500:five_prime_UTR 25.0%
!!! TGTTTTTTTAACCTGATTTC+TGG + chr5_4:16231062-16231081 Msa0840500:five_prime_UTR 25.0%
! TCATAGAAATCTTATTGCTA+TGG + chr5_4:16231187-16231206 Msa0840500:five_prime_UTR 25.0%
! AAACCATATAAATGGAACAT+CGG - chr5_4:16231287-16231306 None:intergenic 25.0%
!! TTTATAGCTTTTGTGCTTAA+AGG - chr5_4:16231521-16231540 None:intergenic 25.0%
! CCTGTATAAAATCAACATTA+GGG - chr5_4:16231562-16231581 None:intergenic 25.0%
! ACCTGTATAAAATCAACATT+AGG - chr5_4:16231563-16231582 None:intergenic 25.0%
! AGGATAACATGGTTATATAA+AGG + chr5_4:16231943-16231962 Msa0840500:intron 25.0%
! TCAAGTATCCTAAGAAATTA+AGG - chr5_4:16232135-16232154 None:intergenic 25.0%
! CTTAGGATACTTGAATAATA+AGG + chr5_4:16232141-16232160 Msa0840500:intron 25.0%
! ACTTGAATCAATGTTAGTAT+TGG + chr5_4:16232690-16232709 Msa0840500:intron 25.0%
!! AATCAATGTTAGTATTGGAA+TGG + chr5_4:16232695-16232714 Msa0840500:intron 25.0%
!!! ACATATTTTCTTCTGGTTTT+GGG - chr5_4:16233082-16233101 None:intergenic 25.0%
!! ATACATGACATATTTTCTTC+TGG - chr5_4:16233089-16233108 None:intergenic 25.0%
! AGAAGAAAATATGTCATGTA+TGG + chr5_4:16233088-16233107 Msa0840500:intron 25.0%
! AGTTCAAAAGTAATTTCTCT+AGG - chr5_4:16233122-16233141 None:intergenic 25.0%
! AGTGGTACAAATAAACTTAA+AGG - chr5_4:16233274-16233293 None:intergenic 25.0%
! GTTTAGATCATAAAATCTGA+GGG - chr5_4:16233416-16233435 None:intergenic 25.0%
! AGTTTAGATCATAAAATCTG+AGG - chr5_4:16233417-16233436 None:intergenic 25.0%
!!! TTATGCTCTTTCTTTTTTCA+AGG - chr5_4:16233979-16233998 None:intergenic 25.0%
!! AAAAAAGAAAGAGCATAAAC+AGG + chr5_4:16233981-16234000 Msa0840500:intron 25.0%
!!! TTCAAAGTGGATTTTGAAAA+AGG - chr5_4:16234668-16234687 None:intergenic 25.0%
! TCAAATATTAGATGGTATTC+TGG - chr5_4:16234744-16234763 None:intergenic 25.0%
! TATGTATAAAATTCTTGCGA+AGG - chr5_4:16234840-16234859 None:intergenic 25.0%
!!! GAAAGTACTATTTATTCCTT+TGG + chr5_4:16234931-16234950 Msa0840500:intron 25.0%
!! TGGTTTCATTAAAGACTTTT+GGG - chr5_4:16235017-16235036 None:intergenic 25.0%
!! TTGGTTTCATTAAAGACTTT+TGG - chr5_4:16235018-16235037 None:intergenic 25.0%
!!! TTTTTCTACTCATTTTCAAG+CGG - chr5_4:16235197-16235216 None:intergenic 25.0%
! AATGTGTAAAAATAGCTCTT+CGG + chr5_4:16235215-16235234 Msa0840500:intron 25.0%
!!! GCTAACTCTAAATTTTTTCA+TGG - chr5_4:16235322-16235341 None:intergenic 25.0%
!!! TGCAAAAATTTTGTTGTTGA+AGG - chr5_4:16235506-16235525 None:intergenic 25.0%
!! TTCAACAACAAAATTTTTGC+AGG + chr5_4:16235505-16235524 Msa0840500:intron 25.0%
! AACAAGCGTAAAAATATCTT+AGG + chr5_4:16235685-16235704 Msa0840500:intron 25.0%
!!! TAAAAATATCTTAGGTTGAC+TGG + chr5_4:16235693-16235712 Msa0840500:intron 25.0%
! GAATTCTGTTTGTCTAAATA+AGG + chr5_4:16235715-16235734 Msa0840500:intron 25.0%
!! CATTTTACTCAATTCTGTTT+TGG + chr5_4:16236584-16236603 Msa0840500:intron 25.0%
!!! TTTTTTTGAAGAGGCTAAAA+TGG - chr5_4:16236976-16236995 None:intergenic 25.0%
! TTAGCCTCTTCAAAAAAAAA+AGG + chr5_4:16236978-16236997 Msa0840500:intron 25.0%
!!! TTCGTTGGTTTTTGTTATAT+TGG - chr5_4:16237128-16237147 None:intergenic 25.0%
! CTACATATAAAGTTCAACTT+TGG + chr5_4:16237246-16237265 Msa0840500:intron 25.0%
!!! AAACAATTTTTGAGTTGGAT+CGG + chr5_4:16237341-16237360 Msa0840500:intron 25.0%
! TTATATATTAAGATGTTGCG+TGG - chr5_4:16237418-16237437 None:intergenic 25.0%
! TGAGATTTGAATTAGGTTTA+GGG - chr5_4:16237475-16237494 None:intergenic 25.0%
! GTAATTGTGAGATTTGAATT+AGG - chr5_4:16237482-16237501 None:intergenic 25.0%
! TTATATATTAAGATGTTGCG+TGG - chr5_4:16237418-16237437 None:intergenic 25.0%
! TGAGATTTGAATTAGGTTTA+GGG - chr5_4:16237475-16237494 None:intergenic 25.0%
! GTAATTGTGAGATTTGAATT+AGG - chr5_4:16237482-16237501 None:intergenic 25.0%
! TATAACACTAAAACAACTAC+TGG - chr5_4:16237794-16237813 None:intergenic 25.0%
! TTAAAATGTCTGTTTGGTAT+AGG - chr5_4:16237840-16237859 None:intergenic 25.0%
!! TACCAAACAGACATTTTAAA+AGG + chr5_4:16237841-16237860 Msa0840500:intron 25.0%
! TGATTAGGGTTTCAAAATTT+GGG + chr5_4:16238121-16238140 Msa0840500:intron 25.0%
! GTGATTTAGTCCTAAAAAAT+AGG + chr5_4:16238260-16238279 Msa0840500:intron 25.0%
! ACAATAACAAAAATACGTTG+AGG - chr5_4:16238297-16238316 None:intergenic 25.0%
! TCAGATGAGTGAATTATAAA+GGG - chr5_4:16238735-16238754 None:intergenic 25.0%
! ATCAGATGAGTGAATTATAA+AGG - chr5_4:16238736-16238755 None:intergenic 25.0%
! TACATATCAGTTATTATGCT+TGG - chr5_4:16238783-16238802 None:intergenic 25.0%
! TGAGATTTGAATTAGGTTTA+GGG - chr5_4:16237475-16237494 None:intergenic 25.0%
! GTAATTGTGAGATTTGAATT+AGG - chr5_4:16237482-16237501 None:intergenic 25.0%
! TGAAAAAGAAATTAAAGTGG+GGG - chr5_4:16238885-16238904 None:intergenic 25.0%
! ACATTAAATATATTGTCGGT+TGG - chr5_4:16239092-16239111 None:intergenic 25.0%
!! GATGATTAAAGTCTAAAACT+CGG + chr5_4:16239395-16239414 Msa0840500:intron 25.0%
! GTTAAACAAAACTAAGGAAA+GGG - chr5_4:16239535-16239554 None:intergenic 25.0%
! ACAAAGGTTAAACAAAACTA+AGG - chr5_4:16239541-16239560 None:intergenic 25.0%
! ACTTAAAAGGAAACAAACAA+AGG - chr5_4:16239557-16239576 None:intergenic 25.0%
! TGAACATTGGAATTTGAATT+AGG - chr5_4:16239636-16239655 None:intergenic 25.0%
! GTGTATACTATTGTAAATTC+CGG - chr5_4:16239925-16239944 None:intergenic 25.0%
! TAACAACTTTGAGTAAGAAA+TGG - chr5_4:16230736-16230755 None:intergenic 25.0%
! ATGGGATAGTAAATTGAATT+TGG - chr5_4:16230834-16230853 None:intergenic 25.0%
! ATAACACCTAATAGTACAAT+GGG - chr5_4:16230852-16230871 None:intergenic 25.0%
! GTTAAGAAATTAGAACCATT+AGG + chr5_4:16230981-16231000 Msa0840500:five_prime_UTR 25.0%
!!! TGTTTTTTTAACCTGATTTC+TGG + chr5_4:16231062-16231081 Msa0840500:five_prime_UTR 25.0%
!! TGTTTAATAACCAGATTTTG+AGG - chr5_4:16240419-16240438 None:intergenic 25.0%
! AAACCATATAAATGGAACAT+CGG - chr5_4:16231287-16231306 None:intergenic 25.0%
! AGAGAGATAAACCATATAAA+TGG - chr5_4:16240613-16240632 None:intergenic 25.0%
!! TTTATAGCTTTTGTGCTTAA+AGG - chr5_4:16231521-16231540 None:intergenic 25.0%
! CCTGTATAAAATCAACATTA+GGG - chr5_4:16231562-16231581 None:intergenic 25.0%
! ACCTGTATAAAATCAACATT+AGG - chr5_4:16231563-16231582 None:intergenic 25.0%
! AGGATAACATGGTTATATAA+AGG + chr5_4:16231943-16231962 Msa0840500:intron 25.0%
! TCAAGTATCCTAAGAAATTA+AGG - chr5_4:16232135-16232154 None:intergenic 25.0%
! CTTAGGATACTTGAATAATA+AGG + chr5_4:16232141-16232160 Msa0840500:intron 25.0%
! ACTTGAATCAATGTTAGTAT+TGG + chr5_4:16232690-16232709 Msa0840500:intron 25.0%
!! AATCAATGTTAGTATTGGAA+TGG + chr5_4:16232695-16232714 Msa0840500:intron 25.0%
! CTATTGTAAATTCCGGTTTT+TGG - chr5_4:16230600-16230619 None:intergenic 30.0%
GTGTGTACTATTGTAAATTC+CGG - chr5_4:16230607-16230626 None:intergenic 30.0%
GTTACCTTTAGTCAAATCAA+TGG + chr5_4:16230752-16230771 Msa0840500:five_prime_UTR 30.0%
TACTATCCCATTGTACTATT+AGG + chr5_4:16230843-16230862 Msa0840500:five_prime_UTR 30.0%
CATAACACCTAATAGTACAA+TGG - chr5_4:16230853-16230872 None:intergenic 30.0%
ATTTCATCAACACTACTAAG+AGG - chr5_4:16230906-16230925 None:intergenic 30.0%
GAAATAATAGGAATGCCTAA+TGG - chr5_4:16230999-16231018 None:intergenic 30.0%
!! TTTTCTGGCACAGAAATAAT+AGG - chr5_4:16231011-16231030 None:intergenic 30.0%
! ATCGAATCCTTTTCATTTTC+TGG - chr5_4:16231026-16231045 None:intergenic 30.0%
AAACAAAGTTACCAGAAATC+AGG - chr5_4:16231076-16231095 None:intergenic 30.0%
! GTGTCTTCTTGTTTAATAAC+CGG - chr5_4:16231110-16231129 None:intergenic 30.0%
! AACAGCTAGATACACATTTT+TGG - chr5_4:16231261-16231280 None:intergenic 30.0%
AGAGCGATAAACCATATAAA+TGG - chr5_4:16231295-16231314 None:intergenic 30.0%
!!! CCCTAATGTTGATTTTATAC+AGG + chr5_4:16231559-16231578 Msa0840500:five_prime_UTR 30.0%
GCACATCCTTAAAAAAATCT+AGG - chr5_4:16231658-16231677 None:intergenic 30.0%
!! TAAAGGTTTTGTCTATTGTG+TGG + chr5_4:16231960-16231979 Msa0840500:intron 30.0%
AATCAATCTCATGCTAATGT+AGG - chr5_4:16231994-16232013 None:intergenic 30.0%
ATGTCGACAATTGATAAAGA+TGG + chr5_4:16232172-16232191 Msa0840500:five_prime_UTR 30.0%
! AATTTTGCATCCTGAAATAG+TGG + chr5_4:16232402-16232421 Msa0840500:five_prime_UTR 30.0%
TTCATATACTTACCCTGTAA+CGG - chr5_4:16232434-16232453 None:intergenic 30.0%
GGAAAATGATGAAACACTTA+AGG - chr5_4:16232505-16232524 None:intergenic 30.0%
! TTGGTTGAATGTGATTGTTT+TGG + chr5_4:16232918-16232937 Msa0840500:intron 30.0%
!!! GACATATTTTCTTCTGGTTT+TGG - chr5_4:16233083-16233102 None:intergenic 30.0%
GTAGAATCAGAATGTTAAGA+TGG - chr5_4:16233465-16233484 None:intergenic 30.0%
! CTTTTGGATGATTGAATGTT+GGG - chr5_4:16233522-16233541 None:intergenic 30.0%
TGGTATCTATGAAGTTTAGT+TGG + chr5_4:16233722-16233741 Msa0840500:intron 30.0%
GGTATCTATGAAGTTTAGTT+GGG + chr5_4:16233723-16233742 Msa0840500:intron 30.0%
! CGAAACAAATTTTGTCTATG+CGG + chr5_4:16233820-16233839 Msa0840500:intron 30.0%
TCTAAACATTTATCTTTCGG+TGG - chr5_4:16234044-16234063 None:intergenic 30.0%
! GATTTTATGCGAGTAATCAA+AGG + chr5_4:16234083-16234102 Msa0840500:intron 30.0%
! AATCTCCCTTTTGTGTATTT+GGG - chr5_4:16234152-16234171 None:intergenic 30.0%
! AAATCTCCCTTTTGTGTATT+TGG - chr5_4:16234153-16234172 None:intergenic 30.0%
TTCACAAAGAGTCAATTGTT+TGG - chr5_4:16234236-16234255 None:intergenic 30.0%
ATATCGCTTCAAACAAAGTA+AGG + chr5_4:16234273-16234292 Msa0840500:intron 30.0%
!!! CAACATCAGTTTTGGTTAAT+GGG - chr5_4:16234544-16234563 None:intergenic 30.0%
!!! ACAACATCAGTTTTGGTTAA+TGG - chr5_4:16234545-16234564 None:intergenic 30.0%
GATAAAAGAATGCATAGGTA+CGG - chr5_4:16234570-16234589 None:intergenic 30.0%
AAGTGGATAAAAGAATGCAT+AGG - chr5_4:16234575-16234594 None:intergenic 30.0%
! AATCCACTTTGAAAAGAAGA+AGG + chr5_4:16234675-16234694 Msa0840500:intron 30.0%
AATATTAGATGGTATTCTGG+TGG - chr5_4:16234741-16234760 None:intergenic 30.0%
ACTTCGTTATATTATTGGGT+CGG - chr5_4:16234804-16234823 None:intergenic 30.0%
TTTCATTGCTCTTATTCCTA+AGG - chr5_4:16234915-16234934 None:intergenic 30.0%
AAACCAAAAGTAATACCATC+AGG + chr5_4:16235031-16235050 Msa0840500:intron 30.0%
AACCAAAAGTAATACCATCA+GGG + chr5_4:16235032-16235051 Msa0840500:intron 30.0%
!! TTTTCTACTCATTTTCAAGC+GGG - chr5_4:16235196-16235215 None:intergenic 30.0%
! AAATGTTGGGAAAATTTTCC+AGG - chr5_4:16235664-16235683 None:intergenic 30.0%
! TTTACGCTTGTTGAAATGTT+GGG - chr5_4:16235677-16235696 None:intergenic 30.0%
!! TTTTACGCTTGTTGAAATGT+TGG - chr5_4:16235678-16235697 None:intergenic 30.0%
TTCTGTTTGTCTAAATAAGG+AGG + chr5_4:16235718-16235737 Msa0840500:intron 30.0%
TTTGGAAGTAAGGAGAATTA+GGG + chr5_4:16235748-16235767 Msa0840500:intron 30.0%
GAGAATTAGGGAGTTTAATA+TGG + chr5_4:16235760-16235779 Msa0840500:intron 30.0%
!! GAGTTTAATATGGCCTTATT+AGG + chr5_4:16235770-16235789 Msa0840500:intron 30.0%
!! TAGCAGATTGTTTGAGTTTT+CGG + chr5_4:16236042-16236061 Msa0840500:intron 30.0%
ACATTGCTCTTACTTTAGTA+CGG + chr5_4:16236499-16236518 Msa0840500:intron 30.0%
!! TTTACTCAATTCTGTTTTGG+TGG + chr5_4:16236587-16236606 Msa0840500:intron 30.0%
!!! TCACTATTTTAATCGCCATT+TGG + chr5_4:16236630-16236649 Msa0840500:intron 30.0%
!!! AGCACCTTTTTTTTTTGAAG+AGG - chr5_4:16236985-16237004 None:intergenic 30.0%
! TTCTAGTTGTAGAATTTCGT+TGG - chr5_4:16237143-16237162 None:intergenic 30.0%
!! AGGTTTAGGGTTTTCATATT+AGG - chr5_4:16237462-16237481 None:intergenic 30.0%
GTGAGATTTGAATTAGGTTT+AGG - chr5_4:16237476-16237495 None:intergenic 30.0%
ATTAGGGTTAATTAAAGTGG+GGG - chr5_4:16237513-16237532 None:intergenic 30.0%
GATTAGGGTTAATTAAAGTG+GGG - chr5_4:16237514-16237533 None:intergenic 30.0%
GGATTAGGGTTAATTAAAGT+GGG - chr5_4:16237515-16237534 None:intergenic 30.0%
AGGATTAGGGTTAATTAAAG+TGG - chr5_4:16237516-16237535 None:intergenic 30.0%
!! AGGTTTAGGGTTTTCATATT+AGG - chr5_4:16237462-16237481 None:intergenic 30.0%
GTGAGATTTGAATTAGGTTT+AGG - chr5_4:16237476-16237495 None:intergenic 30.0%
ATTAGGGTTAATTAAAGTGG+GGG - chr5_4:16237513-16237532 None:intergenic 30.0%
GATTAGGGTTAATTAAAGTG+GGG - chr5_4:16237514-16237533 None:intergenic 30.0%
GGATTAGGGTTAATTAAAGT+GGG - chr5_4:16237515-16237534 None:intergenic 30.0%
AGGATTAGGGTTAATTAAAG+TGG - chr5_4:16237516-16237535 None:intergenic 30.0%
!!! TGCCTTTTAAAATGTCTGTT+TGG - chr5_4:16237846-16237865 None:intergenic 30.0%
AATCGTATAACGTTAAAGTC+AGG - chr5_4:16237891-16237910 None:intergenic 30.0%
!! GCATCAGAATCATATTTTTG+CGG - chr5_4:16238003-16238022 None:intergenic 30.0%
CGTCCATGATAACTTATTAA+TGG + chr5_4:16238029-16238048 Msa0840500:intron 30.0%
! TGATTTTCTGGATAGTGATT+AGG + chr5_4:16238106-16238125 Msa0840500:intron 30.0%
! GATTTTCTGGATAGTGATTA+GGG + chr5_4:16238107-16238126 Msa0840500:intron 30.0%
GTGATTAGGGTTTCAAAATT+TGG + chr5_4:16238120-16238139 Msa0840500:intron 30.0%
GATTAGGGTTTCAAAATTTG+GGG + chr5_4:16238122-16238141 Msa0840500:intron 30.0%
! GTCTTCATGTTTTCTGATAT+AGG + chr5_4:16238206-16238225 Msa0840500:intron 30.0%
! CATGTTTTCTGATATAGGTT+AGG + chr5_4:16238211-16238230 Msa0840500:intron 30.0%
TTTCTGATATAGGTTAGGAT+TGG + chr5_4:16238216-16238235 Msa0840500:intron 30.0%
!!! GGCAATTTTCCCTATTTTTT+AGG - chr5_4:16238273-16238292 None:intergenic 30.0%
ATAACAAAAATACGTTGAGG+TGG - chr5_4:16238294-16238313 None:intergenic 30.0%
CTCACTCTCTTCTTATAAAT+AGG + chr5_4:16238594-16238613 Msa0840500:intron 30.0%
TATGGAAAACAGAACATGAA+GGG - chr5_4:16238634-16238653 None:intergenic 30.0%
TTATGGAAAACAGAACATGA+AGG - chr5_4:16238635-16238654 None:intergenic 30.0%
ACTACACATTAGTTATGCTT+TGG - chr5_4:16238688-16238707 None:intergenic 30.0%
AAAGCATAACTAATGTGTAG+TGG + chr5_4:16238687-16238706 Msa0840500:intron 30.0%
AAGCATAACTAATGTGTAGT+GGG + chr5_4:16238688-16238707 Msa0840500:intron 30.0%
AGATGAGTGAATTATAAAGG+GGG - chr5_4:16238733-16238752 None:intergenic 30.0%
CAGATGAGTGAATTATAAAG+GGG - chr5_4:16238734-16238753 None:intergenic 30.0%
GTGAGATTTGAATTAGGTTT+AGG - chr5_4:16237476-16237495 None:intergenic 30.0%
CACTTGTATCTGTTAGTATA+TGG + chr5_4:16239130-16239149 Msa0840500:intron 30.0%
TTGTATCTGTTAGTATATGG+TGG + chr5_4:16239133-16239152 Msa0840500:intron 30.0%
!! GGTTCTCATATTTTAGATTG+CGG + chr5_4:16239160-16239179 Msa0840500:intron 30.0%
!!! TTTGGTTTTTGACTGTTTTG+TGG - chr5_4:16239476-16239495 None:intergenic 30.0%
GGTTAAACAAAACTAAGGAA+AGG - chr5_4:16239536-16239555 None:intergenic 30.0%
!! TTTGGTGAGAAGTACTTAAA+AGG - chr5_4:16239570-16239589 None:intergenic 30.0%
ATTGAGAAAACAAGGTTTAG+TGG - chr5_4:16239695-16239714 None:intergenic 30.0%
! GGTTTTCAATTGAATTTGTG+TGG - chr5_4:16239722-16239741 None:intergenic 30.0%
AATGCTCTTATAAAGGACTA+GGG - chr5_4:16239758-16239777 None:intergenic 30.0%
!! TTGATTTTCAGGAAAGTGAA+TGG - chr5_4:16239833-16239852 None:intergenic 30.0%
TTCACTTTCCTGAAAATCAA+TGG + chr5_4:16239833-16239852 Msa0840500:intron 30.0%
!! TTTTTGGTGAATACCAAGAA+GGG - chr5_4:16239902-16239921 None:intergenic 30.0%
! CTATTGTAAATTCCGGTTTT+TGG - chr5_4:16230600-16230619 None:intergenic 30.0%
GTTACCTTTAGTCAAATCAA+TGG + chr5_4:16230752-16230771 Msa0840500:five_prime_UTR 30.0%
TACTATCCCATTGTACTATT+AGG + chr5_4:16230843-16230862 Msa0840500:five_prime_UTR 30.0%
CATAACACCTAATAGTACAA+TGG - chr5_4:16230853-16230872 None:intergenic 30.0%
ATTTCATCAACACTACTAAG+AGG - chr5_4:16230906-16230925 None:intergenic 30.0%
GAAATAATAGGAATGCCTAA+TGG - chr5_4:16230999-16231018 None:intergenic 30.0%
!! TTTTCTGGCACAGAAATAAT+AGG - chr5_4:16231011-16231030 None:intergenic 30.0%
! ATCGAATCCTTTTCATTTTC+TGG - chr5_4:16231026-16231045 None:intergenic 30.0%
AAACAAAGTTACCAGAAATC+AGG - chr5_4:16231076-16231095 None:intergenic 30.0%
TCATAGAAATCTTATTGCCA+TGG + chr5_4:16240505-16240524 Msa0840500:CDS 30.0%
!!! TAGATACACATTTTTGGAAC+TGG - chr5_4:16231255-16231274 None:intergenic 30.0%
! AACAGCTAGATACACATTTT+TGG - chr5_4:16231261-16231280 None:intergenic 30.0%
TTGACATTGATGAGACTATT+AGG + chr5_4:16240684-16240703 Msa0840500:CDS 30.0%
TGACATTGATGAGACTATTA+GGG + chr5_4:16240685-16240704 Msa0840500:CDS 30.0%
!!! CCCTAATGTTGATTTTATAC+AGG + chr5_4:16231559-16231578 Msa0840500:five_prime_UTR 30.0%
GCACATCCTTAAAAAAATCT+AGG - chr5_4:16231658-16231677 None:intergenic 30.0%
AAAGTGGTATATTGGAATAG+TGG + chr5_4:16241125-16241144 Msa0840500:CDS 30.0%
!! TAAAGGTTTTGTCTATTGTG+TGG + chr5_4:16231960-16231979 Msa0840500:intron 30.0%
AATCAATCTCATGCTAATGT+AGG - chr5_4:16231994-16232013 None:intergenic 30.0%
ATGTCGACAATTGATAAAGA+TGG + chr5_4:16232172-16232191 Msa0840500:five_prime_UTR 30.0%
! AATTTTGCATCCTGAAATAG+TGG + chr5_4:16232402-16232421 Msa0840500:five_prime_UTR 30.0%
TTCATATACTTACCCTGTAA+CGG - chr5_4:16232434-16232453 None:intergenic 30.0%
GGAAAATGATGAAACACTTA+AGG - chr5_4:16232505-16232524 None:intergenic 30.0%
TTCAGAAAAGTGAATGGTAC+TGG - chr5_4:16230509-16230528 None:intergenic 35.0%
!! TTTTTGGTGAATACCAAGGA+GGG - chr5_4:16230584-16230603 None:intergenic 35.0%
!!! ATTTTTTCTCACCCTCATGA+TGG + chr5_4:16230675-16230694 Msa0840500:five_prime_UTR 35.0%
!!! TTTTTTCTCACCCTCATGAT+GGG + chr5_4:16230676-16230695 Msa0840500:five_prime_UTR 35.0%
TCCAGATGAGGAATCAATAA+GGG - chr5_4:16230709-16230728 None:intergenic 35.0%
TTCCAGATGAGGAATCAATA+AGG - chr5_4:16230710-16230729 None:intergenic 35.0%
!! GAAGCCATTGATTTGACTAA+AGG - chr5_4:16230759-16230778 None:intergenic 35.0%
TTAGTCAAATCAATGGCTTC+TGG + chr5_4:16230759-16230778 Msa0840500:five_prime_UTR 35.0%
TTGGAAGTAGAAGCAAAACA+AGG - chr5_4:16230815-16230834 None:intergenic 35.0%
! CTATTAGGTGTTATGTACCT+AGG + chr5_4:16230858-16230877 Msa0840500:five_prime_UTR 35.0%
ACACTACTAAGAGGATTCAA+TGG - chr5_4:16230897-16230916 None:intergenic 35.0%
! TGTTGATGAAATTCGTAAGC+AGG + chr5_4:16230914-16230933 Msa0840500:five_prime_UTR 35.0%
TTCTGTGCCAGAAAATGAAA+AGG + chr5_4:16231016-16231035 Msa0840500:five_prime_UTR 35.0%
!! TGTTTAATAACCGGCTTTTG+AGG - chr5_4:16231101-16231120 None:intergenic 35.0%
! GCTGCTATATTGTTTTCTTC+TGG + chr5_4:16231131-16231150 Msa0840500:five_prime_UTR 35.0%
! TTGTTTTCTTCTGGTACTAC+TGG + chr5_4:16231140-16231159 Msa0840500:five_prime_UTR 35.0%
TTGCCGATGTTCCATTTATA+TGG + chr5_4:16231281-16231300 Msa0840500:five_prime_UTR 35.0%
GTTCTACAATCGTTGTAATG+CGG + chr5_4:16231339-16231358 Msa0840500:five_prime_UTR 35.0%
TTGACATTGACGAGACTATT+AGG + chr5_4:16231366-16231385 Msa0840500:five_prime_UTR 35.0%
TGACATTGACGAGACTATTA+GGG + chr5_4:16231367-16231386 Msa0840500:five_prime_UTR 35.0%
AATCAACATTAGGGAAAGCT+TGG - chr5_4:16231553-16231572 None:intergenic 35.0%
TTTCGCAACTATTCTTCACT+AGG + chr5_4:16231759-16231778 Msa0840500:five_prime_UTR 35.0%
TTCGCAACTATTCTTCACTA+GGG + chr5_4:16231760-16231779 Msa0840500:five_prime_UTR 35.0%
AAAGTGGTAGATTGGAATAG+TGG + chr5_4:16231807-16231826 Msa0840500:five_prime_UTR 35.0%
AATTGGAATAGCAACAAGAC+AGG - chr5_4:16232090-16232109 None:intergenic 35.0%
CGACAATTGATAAAGATGGT+TGG + chr5_4:16232176-16232195 Msa0840500:five_prime_UTR 35.0%
TATCAAATACAAGGGCTTTC+AGG + chr5_4:16232270-16232289 Msa0840500:five_prime_UTR 35.0%
! TTTTCCATATATCAGTGCGA+AGG + chr5_4:16232519-16232538 Msa0840500:intron 35.0%
ACGAAATCGATAACATCCTT+TGG - chr5_4:16232607-16232626 None:intergenic 35.0%
!!! TTTAACCCTTTTTTGTTGGC+AGG + chr5_4:16232727-16232746 Msa0840500:intron 35.0%
GAAATGCCTTAGAGTTTAGA+AGG - chr5_4:16232851-16232870 None:intergenic 35.0%
GGGTTATCATAGCATGAAAT+TGG + chr5_4:16232899-16232918 Msa0840500:intron 35.0%
ATGCAGCATGAGTGATATTA+AGG + chr5_4:16232944-16232963 Msa0840500:intron 35.0%
GAATACTACAAGTGTCTAAG+TGG - chr5_4:16233361-16233380 None:intergenic 35.0%
AGAATGTTAAGATGGATGAG+TGG - chr5_4:16233457-16233476 None:intergenic 35.0%
! CCTTTTGGATGATTGAATGT+TGG - chr5_4:16233523-16233542 None:intergenic 35.0%
CCAACATTCAATCATCCAAA+AGG + chr5_4:16233520-16233539 Msa0840500:intron 35.0%
AAAATAATGCTGCAGCTAGA+TGG - chr5_4:16233551-16233570 None:intergenic 35.0%
GCATAAAATCTAGACTGTCA+GGG - chr5_4:16234073-16234092 None:intergenic 35.0%
! ATCTCCCTTTTGTGTATTTG+GGG - chr5_4:16234151-16234170 None:intergenic 35.0%
!! TTAGTTCTGAAGTGTAAGGT+TGG - chr5_4:16234176-16234195 None:intergenic 35.0%
GTGTAAATGTTCATCAGTCT+TGG - chr5_4:16234214-16234233 None:intergenic 35.0%
TTCTTTCACGGTTATAAGGT+GGG - chr5_4:16234398-16234417 None:intergenic 35.0%
TCAGTTCTTTCACGGTTATA+AGG - chr5_4:16234402-16234421 None:intergenic 35.0%
!! AGACGAGTTTTCTTTGAAGA+GGG - chr5_4:16234513-16234532 None:intergenic 35.0%
TTCAAAGAAAACTCGTCTGT+TGG + chr5_4:16234515-16234534 Msa0840500:intron 35.0%
TCAAAGAAAACTCGTCTGTT+GGG + chr5_4:16234516-16234535 Msa0840500:intron 35.0%
GATGAGGTTATGCATAAGAT+GGG - chr5_4:16234617-16234636 None:intergenic 35.0%
AGATGAGGTTATGCATAAGA+TGG - chr5_4:16234618-16234637 None:intergenic 35.0%
AGACTGGAGATATTTAGATG+AGG - chr5_4:16234633-16234652 None:intergenic 35.0%
AAGGGTCGTCAAATATTAGA+TGG - chr5_4:16234752-16234771 None:intergenic 35.0%
TATTATTGGGTCGGTTATCT+CGG - chr5_4:16234795-16234814 None:intergenic 35.0%
ATACTTCCCACCAAAGATAT+CGG + chr5_4:16234857-16234876 Msa0840500:intron 35.0%
TGTGATAACTATAAATGCCC+TGG - chr5_4:16235058-16235077 None:intergenic 35.0%
AGGAATTGTTCTCTTTGTCT+CGG - chr5_4:16235402-16235421 None:intergenic 35.0%
CGAACAAAGCTATTATAACC+TGG + chr5_4:16235643-16235662 Msa0840500:intron 35.0%
GTTTGTCTAAATAAGGAGGT+TGG + chr5_4:16235722-16235741 Msa0840500:intron 35.0%
GTTTGGAAGTAAGGAGAATT+AGG + chr5_4:16235747-16235766 Msa0840500:intron 35.0%
!! ATATGGCCTTATTAGGTAAG+TGG + chr5_4:16235777-16235796 Msa0840500:intron 35.0%
! TTGAGTTTTCGGTGGTTAAA+TGG + chr5_4:16236053-16236072 Msa0840500:intron 35.0%
! TGAGTTTTCGGTGGTTAAAT+GGG + chr5_4:16236054-16236073 Msa0840500:intron 35.0%
!! GTGTTTGATTTGTTTCAGCT+GGG + chr5_4:16236082-16236101 Msa0840500:intron 35.0%
ACTTCAAAATGTGACTTTGC+AGG + chr5_4:16236190-16236209 Msa0840500:intron 35.0%
GGACATATGGATATGGAATT+TGG + chr5_4:16236223-16236242 Msa0840500:intron 35.0%
GCAAAAACTACAACCTTCAA+AGG - chr5_4:16236353-16236372 None:intergenic 35.0%
! TGAAGGTTGTAGTTTTTGCT+TGG + chr5_4:16236354-16236373 Msa0840500:intron 35.0%
! ATTCTTGTCTGTGTGTTACT+GGG + chr5_4:16236441-16236460 Msa0840500:intron 35.0%
! TTTGGAACTATATTCTCCGT+TGG + chr5_4:16236522-16236541 Msa0840500:intron 35.0%
AACTATATTCTCCGTTGGAT+TGG + chr5_4:16236527-16236546 Msa0840500:intron 35.0%
ATGATCTGATACATCTAACG+AGG - chr5_4:16236567-16236586 None:intergenic 35.0%
TAAACTCACTTTCTTTCTCG+TGG + chr5_4:16236741-16236760 Msa0840500:intron 35.0%
TCTCTCTCAATTACCATAGT+TGG + chr5_4:16236786-16236805 Msa0840500:intron 35.0%
!!! CAGACTCTTTTGTTTTTCCT+TGG + chr5_4:16236907-16236926 Msa0840500:intron 35.0%
AGGTGCTTAAAAGATAGACA+CGG + chr5_4:16237039-16237058 Msa0840500:intron 35.0%
!! TTTGGTTCTTGAACCAAGTA+CGG + chr5_4:16237293-16237312 Msa0840500:intron 35.0%
AAATTAGACCCAATAGTCGT+TGG - chr5_4:16237383-16237402 None:intergenic 35.0%
TCTCAAAAAAGGCAGGATTA+GGG - chr5_4:16237529-16237548 None:intergenic 35.0%
TTAAACCTCTCAAAAAAGGC+AGG - chr5_4:16237536-16237555 None:intergenic 35.0%
TCTCAAAAAAGGCAGGATTA+GGG - chr5_4:16237529-16237548 None:intergenic 35.0%
TTAAACCTCTCAAAAAAGGC+AGG - chr5_4:16237536-16237555 None:intergenic 35.0%
! TTCTGAAAAATGTCTCTGCA+TGG + chr5_4:16237719-16237738 Msa0840500:intron 35.0%
TAAAACAACTACTGGTCAAG+TGG - chr5_4:16237786-16237805 None:intergenic 35.0%
TGGTATAGGATATGCATTAG+TGG - chr5_4:16237826-16237845 None:intergenic 35.0%
GTATAACGTTAAAGTCAGGA+AGG - chr5_4:16237887-16237906 None:intergenic 35.0%
GTTGAGATCACATGAATAAG+GGG - chr5_4:16237929-16237948 None:intergenic 35.0%
GGTTGAGATCACATGAATAA+GGG - chr5_4:16237930-16237949 None:intergenic 35.0%
AGGTTGAGATCACATGAATA+AGG - chr5_4:16237931-16237950 None:intergenic 35.0%
!! TATTTTTGCGGAGAAATCGA+AGG - chr5_4:16237991-16238010 None:intergenic 35.0%
! ATATAGGTTAGGATTGGCAA+TGG + chr5_4:16238222-16238241 Msa0840500:intron 35.0%
TGTATCCTTAAACACTGCTT+AGG + chr5_4:16238314-16238333 Msa0840500:intron 35.0%
AACTACCTAAGCAGTGTTTA+AGG - chr5_4:16238322-16238341 None:intergenic 35.0%
! GGGTCAAGACTATATTTTCA+AGG - chr5_4:16238431-16238450 None:intergenic 35.0%
AACAACATTGTACGTGTTCA+GGG - chr5_4:16238451-16238470 None:intergenic 35.0%
ATCAGTTATTATGCTTGGAG+TGG - chr5_4:16238778-16238797 None:intergenic 35.0%
! CTGATGGTGTGAATAATGAA+TGG - chr5_4:16239018-16239037 None:intergenic 35.0%
CGGCATGAAAACTTATTGTT+TGG - chr5_4:16239049-16239068 None:intergenic 35.0%
TTAGTGATGACAGATGGATA+CGG - chr5_4:16239069-16239088 None:intergenic 35.0%
AAAAAGGGAACAAATCATGC+TGG - chr5_4:16239253-16239272 None:intergenic 35.0%
!! TTTTGACTGTTTTGTGGAAG+AGG - chr5_4:16239470-16239489 None:intergenic 35.0%
!! GGTTTTGTGTTTGTGAACAT+TGG - chr5_4:16239649-16239668 None:intergenic 35.0%
AAACAAGGTTTAGTGGAGTT+TGG - chr5_4:16239688-16239707 None:intergenic 35.0%
GTGGTTGAATTGAGAAAACA+AGG - chr5_4:16239703-16239722 None:intergenic 35.0%
TATAAAGGACTAGGGTTTAG+TGG - chr5_4:16239750-16239769 None:intergenic 35.0%
GAATGCTCTTATAAAGGACT+AGG - chr5_4:16239759-16239778 None:intergenic 35.0%
!!! ATTTGCAGCCATTGATTTTC+AGG - chr5_4:16230526-16230545 None:intergenic 35.0%
!!! GTTTTTGGTGAATACCAAGA+AGG - chr5_4:16239903-16239922 None:intergenic 35.0%
TCTTGGTATTCACCAAAAAC+CGG + chr5_4:16239903-16239922 Msa0840500:intron 35.0%
ACAATAGTATACACTCTCCT+AGG + chr5_4:16239931-16239950 Msa0840500:intron 35.0%
!!! ATTTTTTCTCACCCTCATGA+TGG + chr5_4:16230675-16230694 Msa0840500:five_prime_UTR 35.0%
!!! TTTTTTCTCACCCTCATGAT+GGG + chr5_4:16230676-16230695 Msa0840500:five_prime_UTR 35.0%
!! GAAGCCATTGATTTGACTAA+AGG - chr5_4:16230759-16230778 None:intergenic 35.0%
TTAGTCAAATCAATGGCTTC+TGG + chr5_4:16230759-16230778 Msa0840500:five_prime_UTR 35.0%
! GCTTCTGGTCTTCATAAAAT+GGG + chr5_4:16240092-16240111 Msa0840500:CDS 35.0%
CATAAAATGGGAGTTTCACA+AGG + chr5_4:16240104-16240123 Msa0840500:CDS 35.0%
TTGGAAGTAGAAGCAAAACA+AGG - chr5_4:16230815-16230834 None:intergenic 35.0%
! CTATTAGGTGTTATGTACCT+AGG + chr5_4:16230858-16230877 Msa0840500:five_prime_UTR 35.0%
ACACTACTAAGAGGATTCAA+TGG - chr5_4:16230897-16230916 None:intergenic 35.0%
! TGTTGATGAAATTCGTAAGC+AGG + chr5_4:16230914-16230933 Msa0840500:five_prime_UTR 35.0%
TTCTGTGCCAGAAAATGAAA+AGG + chr5_4:16231016-16231035 Msa0840500:five_prime_UTR 35.0%
!!! CTTTGTTTTGCCTCAAAATC+TGG + chr5_4:16240406-16240425 Msa0840500:CDS 35.0%
! GCTGCTATATTGTTTTCTTC+TGG + chr5_4:16231131-16231150 Msa0840500:five_prime_UTR 35.0%
TTGCCGATGTTCCATTTATA+TGG + chr5_4:16231281-16231300 Msa0840500:five_prime_UTR 35.0%
TGGTTTATCTCTCTTTGCTA+CGG + chr5_4:16240619-16240638 Msa0840500:CDS 35.0%
GTTCTTCAATCGTTGTAATG+AGG + chr5_4:16240657-16240676 Msa0840500:CDS 35.0%
TTTCGCAACTATTCTTCACT+AGG + chr5_4:16231759-16231778 Msa0840500:five_prime_UTR 35.0%
TTCGCAACTATTCTTCACTA+GGG + chr5_4:16231760-16231779 Msa0840500:five_prime_UTR 35.0%
AGAGGTCCTTCAATTATGAA+AGG + chr5_4:16241188-16241207 Msa0840500:CDS 35.0%
AATTGGAATAGCAACAAGAC+AGG - chr5_4:16232090-16232109 None:intergenic 35.0%
CGACAATTGATAAAGATGGT+TGG + chr5_4:16232176-16232195 Msa0840500:five_prime_UTR 35.0%
TATCAAATACAAGGGCTTTC+AGG + chr5_4:16232270-16232289 Msa0840500:five_prime_UTR 35.0%
! TTTTCCATATATCAGTGCCA+AGG + chr5_4:16241875-16241894 Msa0840500:intron 35.0%
!!! TTAACCCTTTTTTTCTTGGC+AGG + chr5_4:16242084-16242103 Msa0840500:intron 35.0%
! GGGTGAGTGATGATATTTTG+TGG - chr5_4:16230564-16230583 None:intergenic 40.0%
!!! GTTTTTGGTGAATACCAAGG+AGG - chr5_4:16230585-16230604 None:intergenic 40.0%
CCTTGGTATTCACCAAAAAC+CGG + chr5_4:16230585-16230604 Msa0840500:five_prime_UTR 40.0%
ACAATAGTACACACTCTCCT+AGG + chr5_4:16230613-16230632 Msa0840500:five_prime_UTR 40.0%
ACGATACAACGTCGAGAAAA+GGG - chr5_4:16230653-16230672 None:intergenic 40.0%
AACGATACAACGTCGAGAAA+AGG - chr5_4:16230654-16230673 None:intergenic 40.0%
! TTTTTCTCACCCTCATGATG+GGG + chr5_4:16230677-16230696 Msa0840500:five_prime_UTR 40.0%
AGAAATGGAAGTTCCAGATG+AGG - chr5_4:16230721-16230740 None:intergenic 40.0%
! GCTTCTGGTCTTCACAAAAT+GGG + chr5_4:16230774-16230793 Msa0840500:five_prime_UTR 40.0%
CACAAAATGGGAGTTTCACA+AGG + chr5_4:16230786-16230805 Msa0840500:five_prime_UTR 40.0%
!!! CTTTGTTTTGCCTCAAAAGC+CGG + chr5_4:16231088-16231107 Msa0840500:five_prime_UTR 40.0%
! CTATGGTTGAGCTTTTTGTG+AGG + chr5_4:16231204-16231223 Msa0840500:five_prime_UTR 40.0%
TGGTTTATCGCTCTTTGCTA+CGG + chr5_4:16231301-16231320 Msa0840500:five_prime_UTR 40.0%
TGCTACGGGATTATTGTCAT+TGG + chr5_4:16231316-16231335 Msa0840500:five_prime_UTR 40.0%
GCTACGGGATTATTGTCATT+GGG + chr5_4:16231317-16231336 Msa0840500:five_prime_UTR 40.0%
TGTTGTTCCACCGATATTGT+CGG + chr5_4:16231421-16231440 Msa0840500:five_prime_UTR 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG + chr5_4:16231478-16231497 Msa0840500:five_prime_UTR 40.0%
GGTTTATGGAATGACTGAGT+CGG + chr5_4:16231701-16231720 Msa0840500:intron 40.0%
GTTTATGGAATGACTGAGTC+GGG + chr5_4:16231702-16231721 Msa0840500:five_prime_UTR 40.0%
AGAGGGCCTTCAATTATGAA+AGG + chr5_4:16231870-16231889 Msa0840500:five_prime_UTR 40.0%
! AAAGATGGTTGGCTACATAC+TGG + chr5_4:16232187-16232206 Msa0840500:five_prime_UTR 40.0%
AACACAGCTTCTAAATCAGC+AGG - chr5_4:16232382-16232401 None:intergenic 40.0%
! TCATCCTTCGCACTGATATA+TGG - chr5_4:16232526-16232545 None:intergenic 40.0%
! TGGAAGTGTACTATCTCCAA+AGG + chr5_4:16232588-16232607 Msa0840500:five_prime_UTR 40.0%
!! TATCGATTTCGTTGCTAAGC+AGG + chr5_4:16232615-16232634 Msa0840500:five_prime_UTR 40.0%
AGCAACCTGCCAACAAAAAA+GGG - chr5_4:16232735-16232754 None:intergenic 40.0%
ACTTTGCGAACCTTCTTGAA+TGG - chr5_4:16232758-16232777 None:intergenic 40.0%
ATTCAAGAAGGTTCGCAAAG+TGG + chr5_4:16232757-16232776 Msa0840500:five_prime_UTR 40.0%
! AGCAGTTTCTGAGTTGCTTT+CGG - chr5_4:16232826-16232845 None:intergenic 40.0%
TGCTTGCCTTCTAAACTCTA+AGG + chr5_4:16232842-16232861 Msa0840500:five_prime_UTR 40.0%
TGTGATGTAGACATGCATAG+TGG + chr5_4:16232877-16232896 Msa0840500:intron 40.0%
GTGATGTAGACATGCATAGT+GGG + chr5_4:16232878-16232897 Msa0840500:intron 40.0%
TGATGTAGACATGCATAGTG+GGG + chr5_4:16232879-16232898 Msa0840500:intron 40.0%
AGTGTCTAAGTGGACCTTAT+TGG - chr5_4:16233351-16233370 None:intergenic 40.0%
ATAGAGGAGATGATACCTGA+AGG + chr5_4:16233951-16233970 Msa0840500:intron 40.0%
!!! TCTTTTTTCAAGGCTCCTTC+AGG - chr5_4:16233969-16233988 None:intergenic 40.0%
TAAAATCTAGACTGTCAGGG+TGG - chr5_4:16234070-16234089 None:intergenic 40.0%
CGCATAAAATCTAGACTGTC+AGG - chr5_4:16234074-16234093 None:intergenic 40.0%
! TGAAGCGATATCTGAGTTGA+AGG - chr5_4:16234264-16234283 None:intergenic 40.0%
GTTCTTTCACGGTTATAAGG+TGG - chr5_4:16234399-16234418 None:intergenic 40.0%
! TCGACTAGTCAGTTCTTTCA+CGG - chr5_4:16234410-16234429 None:intergenic 40.0%
CAAAACATTGAAACCCTCTG+CGG + chr5_4:16234442-16234461 Msa0840500:intron 40.0%
! TTCCCCTTTTCTCTTTCTCT+TGG - chr5_4:16234468-16234487 None:intergenic 40.0%
AGAAAGAGAAAAGGGGAAAG+CGG + chr5_4:16234470-16234489 Msa0840500:intron 40.0%
! TTTCTTTGAAGAGGGGTTTG+AGG - chr5_4:16234505-16234524 None:intergenic 40.0%
!! GACGAGTTTTCTTTGAAGAG+GGG - chr5_4:16234512-16234531 None:intergenic 40.0%
!! CAGACGAGTTTTCTTTGAAG+AGG - chr5_4:16234514-16234533 None:intergenic 40.0%
! TACGGCTACAACATCAGTTT+TGG - chr5_4:16234552-16234571 None:intergenic 40.0%
! TATGCATAAGATGGGTTTCC+CGG - chr5_4:16234609-16234628 None:intergenic 40.0%
AAGGTTATGACTCTGTAGAC+TGG - chr5_4:16234649-16234668 None:intergenic 40.0%
! GGACCTTCTTCTTTTCAAAG+TGG - chr5_4:16234681-16234700 None:intergenic 40.0%
! AAGGTCCTTTTTACACTTCC+TGG + chr5_4:16234694-16234713 Msa0840500:intron 40.0%
!! ACTCAGTCGGCTTTTGTTAA+GGG - chr5_4:16234770-16234789 None:intergenic 40.0%
!! TACTCAGTCGGCTTTTGTTA+AGG - chr5_4:16234771-16234790 None:intergenic 40.0%
TACTTCCCACCAAAGATATC+GGG + chr5_4:16234858-16234877 Msa0840500:intron 40.0%
! TGATTTTCGCCCGATATCTT+TGG - chr5_4:16234870-16234889 None:intergenic 40.0%
CGAAAATCATTCAACCGTTG+CGG + chr5_4:16234881-16234900 Msa0840500:intron 40.0%
GAAAATCATTCAACCGTTGC+GGG + chr5_4:16234882-16234901 Msa0840500:intron 40.0%
!!! AAGACTTTTGGGACATTCTG+CGG - chr5_4:16235006-16235025 None:intergenic 40.0%
TTGACCTCCTCTACAGAAAA+CGG + chr5_4:16235094-16235113 Msa0840500:intron 40.0%
! TAAACCGTTTTCTGTAGAGG+AGG - chr5_4:16235101-16235120 None:intergenic 40.0%
! GGTTAAACCGTTTTCTGTAG+AGG - chr5_4:16235104-16235123 None:intergenic 40.0%
GGTCACATTCTAGTATCTGT+TGG - chr5_4:16235381-16235400 None:intergenic 40.0%
ATTGGCATCTTAGACACTCT+CGG - chr5_4:16235537-16235556 None:intergenic 40.0%
!! ATAGCTTTGTTCGAGATCAG+TGG - chr5_4:16235636-16235655 None:intergenic 40.0%
TGTCTAAATAAGGAGGTTGG+TGG + chr5_4:16235725-16235744 Msa0840500:intron 40.0%
!! AAATAAGGAGGTTGGTGGTT+TGG + chr5_4:16235730-16235749 Msa0840500:intron 40.0%
CCAACACCACTTACCTAATA+AGG - chr5_4:16235786-16235805 None:intergenic 40.0%
CCTTATTAGGTAAGTGGTGT+TGG + chr5_4:16235783-16235802 Msa0840500:intron 40.0%
! TATTAGGTAAGTGGTGTTGG+AGG + chr5_4:16235786-16235805 Msa0840500:intron 40.0%
AGAAGGAGAGTTTGTGGTAT+AGG + chr5_4:16235819-16235838 Msa0840500:intron 40.0%
GAAGGAGAGTTTGTGGTATA+GGG + chr5_4:16235820-16235839 Msa0840500:intron 40.0%
TACTCATGTCAGTAGATCAG+TGG + chr5_4:16235952-16235971 Msa0840500:intron 40.0%
ACTCATGTCAGTAGATCAGT+GGG + chr5_4:16235953-16235972 Msa0840500:intron 40.0%
TTTATTTGTGGTCGGATGTG+TGG + chr5_4:16235990-16236009 Msa0840500:intron 40.0%
TTATTTGTGGTCGGATGTGT+GGG + chr5_4:16235991-16236010 Msa0840500:intron 40.0%
TCTGCTAAACCTTTCCCTAA+AGG - chr5_4:16236029-16236048 None:intergenic 40.0%
!! CAGATTGTTTGAGTTTTCGG+TGG + chr5_4:16236045-16236064 Msa0840500:intron 40.0%
!! GGTGTTTGATTTGTTTCAGC+TGG + chr5_4:16236081-16236100 Msa0840500:intron 40.0%
!! TGATTTGTTTCAGCTGGGTT+AGG + chr5_4:16236087-16236106 Msa0840500:intron 40.0%
! GATTTGTTTCAGCTGGGTTA+GGG + chr5_4:16236088-16236107 Msa0840500:intron 40.0%
ACAAGGAGGACATATGGATA+TGG + chr5_4:16236216-16236235 Msa0840500:intron 40.0%
ACAGTTGTAAGCACTACGAA+CGG - chr5_4:16236267-16236286 None:intergenic 40.0%
GCAAAAGAATGTGCCTTTGA+AGG + chr5_4:16236337-16236356 Msa0840500:intron 40.0%
! TTTTTGCTTGGCGTCTGTTT+CGG + chr5_4:16236366-16236385 Msa0840500:intron 40.0%
GATTCTTGTCTGTGTGTTAC+TGG + chr5_4:16236440-16236459 Msa0840500:intron 40.0%
GCTCTTACTTTAGTACGGTT+TGG + chr5_4:16236504-16236523 Msa0840500:intron 40.0%
ATCTGATACATCTAACGAGG+CGG - chr5_4:16236564-16236583 None:intergenic 40.0%
!!! ACTCAATTCTGTTTTGGTGG+TGG + chr5_4:16236590-16236609 Msa0840500:intron 40.0%
!! CATTTGGTTTGCTACTGTGT+GGG + chr5_4:16236646-16236665 Msa0840500:intron 40.0%
TTGCTACTGTGTGGGAAATA+TGG + chr5_4:16236654-16236673 Msa0840500:intron 40.0%
ACTTTCTTTCTCGTGGTTGA+AGG + chr5_4:16236748-16236767 Msa0840500:intron 40.0%
! GGTTGAAGGAGAAATTTGCT+CGG + chr5_4:16236762-16236781 Msa0840500:intron 40.0%
CTCTCAATTACCATAGTTGG+TGG + chr5_4:16236789-16236808 Msa0840500:intron 40.0%
CTTAGTCCCCTCATAATGTT+GGG + chr5_4:16236812-16236831 Msa0840500:intron 40.0%
AAATTGTCCTTCCTAGCACA+AGG - chr5_4:16236937-16236956 None:intergenic 40.0%
ATGTAGTAGTTCGAGTCGTT+TGG - chr5_4:16237232-16237251 None:intergenic 40.0%
GACAATTAACTCACCGTACT+TGG - chr5_4:16237309-16237328 None:intergenic 40.0%
AATTAAAGTGGGGGACACAA+AGG - chr5_4:16237504-16237523 None:intergenic 40.0%
CTCTCAAAAAAGGCAGGATT+AGG - chr5_4:16237530-16237549 None:intergenic 40.0%
!!! CTAATCCTGCCTTTTTTGAG+AGG + chr5_4:16237528-16237547 Msa0840500:intron 40.0%
AATTAAAGTGGGGGACACAA+AGG - chr5_4:16237504-16237523 None:intergenic 40.0%
CTCTCAAAAAAGGCAGGATT+AGG - chr5_4:16237530-16237549 None:intergenic 40.0%
!!! CTAATCCTGCCTTTTTTGAG+AGG + chr5_4:16237528-16237547 Msa0840500:intron 40.0%
! GATGGAAATGGCTGATTTCT+AGG - chr5_4:16237951-16237970 None:intergenic 40.0%
CAACAACATTGTACGTGTTC+AGG - chr5_4:16238452-16238471 None:intergenic 40.0%
!! GTTGGAGTGGCTATTTTCAA+GGG - chr5_4:16238483-16238502 None:intergenic 40.0%
AACCATGACTGATGTGTAGT+GGG + chr5_4:16238500-16238519 Msa0840500:intron 40.0%
! CATAACTAATGTGTAGTGGG+TGG + chr5_4:16238691-16238710 Msa0840500:intron 40.0%
! TGGAGTGGTGACAATTTTCA+AGG - chr5_4:16238763-16238782 None:intergenic 40.0%
AATTAAAGTGGGGGACACAA+TGG - chr5_4:16237504-16237523 None:intergenic 40.0%
GAATAGAGAAGTGAGAGAGA+GGG - chr5_4:16238988-16239007 None:intergenic 40.0%
TGAATAGAGAAGTGAGAGAG+AGG - chr5_4:16238989-16239008 None:intergenic 40.0%
TTGTTTGGTTACTGCACTGA+TGG - chr5_4:16239034-16239053 None:intergenic 40.0%
! CTGTTAGTATATGGTGGAGA+TGG + chr5_4:16239139-16239158 Msa0840500:intron 40.0%
ACAAAACTAAGGAAAGGGAC+AGG - chr5_4:16239530-16239549 None:intergenic 40.0%
TCTTGGGACCATAATCTGTT+TGG - chr5_4:16239598-16239617 None:intergenic 40.0%
AAACAGATTATGGTCCCAAG+AGG + chr5_4:16239597-16239616 Msa0840500:intron 40.0%
GAACATAACAGCTACCTCTT+GGG - chr5_4:16239614-16239633 None:intergenic 40.0%
TTCAGGAAAGTGAATGGTAC+TGG - chr5_4:16239827-16239846 None:intergenic 40.0%
! GGGTGAGTGATGATATTTTG+TGG - chr5_4:16230564-16230583 None:intergenic 40.0%
ATATCATCACTCACCCTTCT+TGG + chr5_4:16239886-16239905 Msa0840500:intron 40.0%
ACGATACAACGTCGAGAAAA+GGG - chr5_4:16230653-16230672 None:intergenic 40.0%
AACGATACAACGTCGAGAAA+AGG - chr5_4:16230654-16230673 None:intergenic 40.0%
! TTTTTCTCACCCTCATGATG+GGG + chr5_4:16230677-16230696 Msa0840500:five_prime_UTR 40.0%
CCCAGAAGAGGAATCAATAA+GGG - chr5_4:16240027-16240046 None:intergenic 40.0%
!! CCCTTATTGATTCCTCTTCT+GGG + chr5_4:16240024-16240043 Msa0840500:CDS 40.0%
TCCCAGAAGAGGAATCAATA+AGG - chr5_4:16240028-16240047 None:intergenic 40.0%
! GGCTTCTGGTCTTCATAAAA+TGG + chr5_4:16240091-16240110 Msa0840500:CDS 40.0%
AAAATGGGAGTTTCACAAGG+TGG + chr5_4:16230789-16230808 Msa0840500:five_prime_UTR 40.0%
! TATTGCCATGGTTGAGCTTT+TGG + chr5_4:16240517-16240536 Msa0840500:CDS 40.0%
GGTTTATCTCTCTTTGCTAC+GGG + chr5_4:16240620-16240639 Msa0840500:CDS 40.0%
TGCTACGGGATTATTGTCAT+TGG + chr5_4:16231316-16231335 Msa0840500:five_prime_UTR 40.0%
GCTACGGGATTATTGTCATT+GGG + chr5_4:16231317-16231336 Msa0840500:five_prime_UTR 40.0%
TCTTGTTCCACCGATATTGT+CGG + chr5_4:16240739-16240758 Msa0840500:CDS 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG + chr5_4:16231478-16231497 Msa0840500:five_prime_UTR 40.0%
AATCAACATTAGGGAGAGCT+TGG - chr5_4:16240871-16240890 None:intergenic 40.0%
GGTTTATGGAATGACTGAGT+CGG + chr5_4:16231701-16231720 Msa0840500:intron 40.0%
GTTTATGGAATGACTGAGTC+GGG + chr5_4:16231702-16231721 Msa0840500:five_prime_UTR 40.0%
TGGAGGCAAAAGTGGTATAT+TGG + chr5_4:16241117-16241136 Msa0840500:CDS 40.0%
! AAAGATGGTTGGCTACATAC+TGG + chr5_4:16232187-16232206 Msa0840500:five_prime_UTR 40.0%
AACACAGCTTCTAAATCAGC+AGG - chr5_4:16232382-16232401 None:intergenic 40.0%
!! TCATCCTTGGCACTGATATA+TGG - chr5_4:16241882-16241901 None:intergenic 40.0%
GCATTTGTGGTCAAGAAAGT+TGG + chr5_4:16241924-16241943 Msa0840500:CDS 40.0%
! TGGAAGTGTACTTTCTCCAA+AGG + chr5_4:16241944-16241963 Msa0840500:CDS 40.0%
ACGAAGTCGATAACATCCTT+TGG - chr5_4:16241963-16241982 None:intergenic 40.0%
GCAACCTGCCAAGAAAAAAA+GGG - chr5_4:16242091-16242110 None:intergenic 40.0%
AGCAACCTGCCAAGAAAAAA+AGG - chr5_4:16242092-16242111 None:intergenic 40.0%
ACTTTGCGAACCTTCTTGAA+TGG - chr5_4:16232758-16232777 None:intergenic 40.0%
ATTCAAGAAGGTTCGCAAAG+TGG + chr5_4:16232757-16232776 Msa0840500:five_prime_UTR 40.0%
! AGCAGTTTCTGAGTTGCTTT+CGG - chr5_4:16232826-16232845 None:intergenic 40.0%
TGCTTGCCTTCTAAACTCTA+AGG + chr5_4:16232842-16232861 Msa0840500:five_prime_UTR 40.0%
TGCATGCCTTAGAGTTTAGA+AGG - chr5_4:16242208-16242227 None:intergenic 40.0%
!! AAACTCTAAGGCATGCATAG+TGG + chr5_4:16242211-16242230 Msa0840500:exon 40.0%
!! AACTCTAAGGCATGCATAGT+GGG + chr5_4:16242212-16242231 Msa0840500:exon 40.0%
ATATCATCACTCACCCTCCT+TGG + chr5_4:16230568-16230587 Msa0840500:five_prime_UTR 45.0%
!!! CCGGTTTTTGGTGAATACCA+AGG - chr5_4:16230588-16230607 None:intergenic 45.0%
TACAACGTCGAGAAAAGGGT+CGG - chr5_4:16230649-16230668 None:intergenic 45.0%
!! GCCCTTATTGATTCCTCATC+TGG + chr5_4:16230705-16230724 Msa0840500:five_prime_UTR 45.0%
! GGCTTCTGGTCTTCACAAAA+TGG + chr5_4:16230773-16230792 Msa0840500:five_prime_UTR 45.0%
ATGGTGTAACAACAGCACCT+AGG - chr5_4:16230878-16230897 None:intergenic 45.0%
CGTAAGCAGGTTAATGACTG+TGG + chr5_4:16230927-16230946 Msa0840500:five_prime_UTR 45.0%
GGTTTATCGCTCTTTGCTAC+GGG + chr5_4:16231302-16231321 Msa0840500:five_prime_UTR 45.0%
! TTGCAGAGTTTGAGACAGGT+CGG + chr5_4:16231482-16231501 Msa0840500:five_prime_UTR 45.0%
AGGGTTGTTAGCTCCAAACA+TGG + chr5_4:16231779-16231798 Msa0840500:five_prime_UTR 45.0%
GTTGTTAGCTCCAAACATGG+AGG + chr5_4:16231782-16231801 Msa0840500:five_prime_UTR 45.0%
TCCAAACATGGAGGCAAAAG+TGG + chr5_4:16231791-16231810 Msa0840500:five_prime_UTR 45.0%
!! ACCACTTTTGCCTCCATGTT+TGG - chr5_4:16231795-16231814 None:intergenic 45.0%
TGGAGGCAAAAGTGGTAGAT+TGG + chr5_4:16231799-16231818 Msa0840500:five_prime_UTR 45.0%
GAAAAGGTTCAAGTGGCTTG+AGG - chr5_4:16232065-16232084 None:intergenic 45.0%
ACAGGCAGAAAAGGTTCAAG+TGG - chr5_4:16232072-16232091 None:intergenic 45.0%
AGCAACAAGACAGGCAGAAA+AGG - chr5_4:16232081-16232100 None:intergenic 45.0%
ACAGCTTCTAAATCAGCAGG+AGG - chr5_4:16232379-16232398 None:intergenic 45.0%
TTCTTGACCACAAATCCCAC+TGG - chr5_4:16232565-16232584 None:intergenic 45.0%
AGTGGGATTTGTGGTCAAGA+AGG + chr5_4:16232564-16232583 Msa0840500:five_prime_UTR 45.0%
GGATTTGTGGTCAAGAAGGT+TGG + chr5_4:16232568-16232587 Msa0840500:five_prime_UTR 45.0%
GAGCAACCTGCCAACAAAAA+AGG - chr5_4:16232736-16232755 None:intergenic 45.0%
TCTTCACCGACAAGATTCCA+AGG + chr5_4:16232780-16232799 Msa0840500:five_prime_UTR 45.0%
CACAGACCTTGGAATCTTGT+CGG - chr5_4:16232789-16232808 None:intergenic 45.0%
AAGATTCCAAGGTCTGTGAC+TGG + chr5_4:16232791-16232810 Msa0840500:five_prime_UTR 45.0%
AGATTCCAAGGTCTGTGACT+GGG + chr5_4:16232792-16232811 Msa0840500:five_prime_UTR 45.0%
! AGTTTCTGAGTTGCTTTCGG+AGG - chr5_4:16232823-16232842 None:intergenic 45.0%
! AGCTAGATGGCTAGACCTTT+TGG - chr5_4:16233538-16233557 None:intergenic 45.0%
!! TGCGGTATTGATACCCAACT+CGG + chr5_4:16233838-16233857 Msa0840500:intron 45.0%
CTAATGTACTGAGCCGAGTT+GGG - chr5_4:16233854-16233873 None:intergenic 45.0%
GCAGCCCCAAATACACAAAA+GGG + chr5_4:16234144-16234163 Msa0840500:intron 45.0%
!! GGCGTTAGTTCTGAAGTGTA+AGG - chr5_4:16234180-16234199 None:intergenic 45.0%
TCATCAGTCTTGGTTGACTG+AGG - chr5_4:16234204-16234223 None:intergenic 45.0%
! GGTGGGTTCAAATGCTACTA+CGG - chr5_4:16234381-16234400 None:intergenic 45.0%
CGGCCAAGAGAAAGAGAAAA+GGG + chr5_4:16234462-16234481 Msa0840500:intron 45.0%
GGCCAAGAGAAAGAGAAAAG+GGG + chr5_4:16234463-16234482 Msa0840500:intron 45.0%
GAAAGAGAAAAGGGGAAAGC+GGG + chr5_4:16234471-16234490 Msa0840500:intron 45.0%
! TGACGCCAGGAAGTGTAAAA+AGG - chr5_4:16234702-16234721 None:intergenic 45.0%
TGGTATTCTGGTGGCAAATG+AGG - chr5_4:16234732-16234751 None:intergenic 45.0%
GGTTATCTCGGATACTCAGT+CGG - chr5_4:16234783-16234802 None:intergenic 45.0%
TTTCGCCCGATATCTTTGGT+GGG - chr5_4:16234866-16234885 None:intergenic 45.0%
! TTTTCGCCCGATATCTTTGG+TGG - chr5_4:16234867-16234886 None:intergenic 45.0%
TGGTGGAGTTTCATAGGAAC+GGG - chr5_4:16234964-16234983 None:intergenic 45.0%
CTGGTGGAGTTTCATAGGAA+CGG - chr5_4:16234965-16234984 None:intergenic 45.0%
!! GGTTTCTGGTGGAGTTTCAT+AGG - chr5_4:16234970-16234989 None:intergenic 45.0%
GTATGATGTGATGCGGTTTC+TGG - chr5_4:16234984-16235003 None:intergenic 45.0%
TTCTGCGGTATGATGTGATG+CGG - chr5_4:16234991-16235010 None:intergenic 45.0%
! GGCCCTGATGGTATTACTTT+TGG - chr5_4:16235037-16235056 None:intergenic 45.0%
AAAGTAATACCATCAGGGCC+AGG + chr5_4:16235037-16235056 Msa0840500:intron 45.0%
AAGTAATACCATCAGGGCCA+GGG + chr5_4:16235038-16235057 Msa0840500:intron 45.0%
! GTTTTCTGTAGAGGAGGTCA+AGG - chr5_4:16235095-16235114 None:intergenic 45.0%
! TCATAGAGAGGGTGCAAGTT+TGG - chr5_4:16235125-16235144 None:intergenic 45.0%
CCATCGTTGTCTCATAGAGA+GGG - chr5_4:16235136-16235155 None:intergenic 45.0%
CCTCTCTATGAGACAACGAT+GGG + chr5_4:16235134-16235153 Msa0840500:intron 45.0%
AGACAACGATGGGAACTGAA+GGG + chr5_4:16235144-16235163 Msa0840500:intron 45.0%
!!! TCGACAGTGTTTTGACTGAG+GGG - chr5_4:16235252-16235271 None:intergenic 45.0%
!!! GTCGACAGTGTTTTGACTGA+GGG - chr5_4:16235253-16235272 None:intergenic 45.0%
!!! TGTCGACAGTGTTTTGACTG+AGG - chr5_4:16235254-16235273 None:intergenic 45.0%
ATCATGTCAAGCAGACGTAG+AGG - chr5_4:16235298-16235317 None:intergenic 45.0%
TATCTGTTGGCAGCAATCTC+GGG - chr5_4:16235368-16235387 None:intergenic 45.0%
GTATCTGTTGGCAGCAATCT+CGG - chr5_4:16235369-16235388 None:intergenic 45.0%
! GGAGTATCACGGTTTATCTG+AGG - chr5_4:16235422-16235441 None:intergenic 45.0%
!! AGTGAGCTAGAGGAGTATCA+CGG - chr5_4:16235433-16235452 None:intergenic 45.0%
AGATCAGTGGCATTCCTTTC+AGG - chr5_4:16235623-16235642 None:intergenic 45.0%
!! AGGTTGGTGGTTTGGAAGTA+AGG + chr5_4:16235738-16235757 Msa0840500:intron 45.0%
! TAAGTGGTGTTGGAGGTTGT+TGG + chr5_4:16235793-16235812 Msa0840500:intron 45.0%
! TTGGAGGTTGTTGGTTGAGA+AGG + chr5_4:16235802-16235821 Msa0840500:intron 45.0%
TGGTTGAGAAGGAGAGTTTG+TGG + chr5_4:16235813-16235832 Msa0840500:intron 45.0%
!! TTTGTGGTATAGGGTGCTGT+CGG + chr5_4:16235829-16235848 Msa0840500:intron 45.0%
CTCATGTCAGTAGATCAGTG+GGG + chr5_4:16235954-16235973 Msa0840500:intron 45.0%
TTCGGTGGTTAAATGGGTGT+CGG + chr5_4:16236060-16236079 Msa0840500:intron 45.0%
! TGTGACTTTGCAGGTTGACA+AGG + chr5_4:16236199-16236218 Msa0840500:intron 45.0%
AGGTTGACAAGGAGGACATA+TGG + chr5_4:16236210-16236229 Msa0840500:intron 45.0%
! TGGTGGATGTGAAGATGCTA+TGG + chr5_4:16236315-16236334 Msa0840500:intron 45.0%
!! CAACCAGAGATAACTTGCTG+CGG + chr5_4:16236399-16236418 Msa0840500:intron 45.0%
!!! CAATTCTGTTTTGGTGGTGG+TGG + chr5_4:16236593-16236612 Msa0840500:intron 45.0%
CCACACAGTAGCAAACCAAA+TGG - chr5_4:16236648-16236667 None:intergenic 45.0%
!! CCATTTGGTTTGCTACTGTG+TGG + chr5_4:16236645-16236664 Msa0840500:intron 45.0%
GCTTAGTCCCCTCATAATGT+TGG + chr5_4:16236811-16236830 Msa0840500:intron 45.0%
TCCGGTACCCAACATTATGA+GGG - chr5_4:16236822-16236841 None:intergenic 45.0%
ATCCGGTACCCAACATTATG+AGG - chr5_4:16236823-16236842 None:intergenic 45.0%
GTGCTAGGAAGGACAATTTG+TGG + chr5_4:16236938-16236957 Msa0840500:intron 45.0%
TAGACCCAATAGTCGTTGGT+GGG - chr5_4:16237379-16237398 None:intergenic 45.0%
TTAGACCCAATAGTCGTTGG+TGG - chr5_4:16237380-16237399 None:intergenic 45.0%
! AAGTGGTCAAAGTGCTTGGA+TGG - chr5_4:16237769-16237788 None:intergenic 45.0%
ACGTTAAAGTCAGGAAGGAG+AGG - chr5_4:16237882-16237901 None:intergenic 45.0%
GAAGGAAAAGGGGGAAGAAA+GGG - chr5_4:16237973-16237992 None:intergenic 45.0%
GGAGAAATCGAAGGAAAAGG+GGG - chr5_4:16237982-16238001 None:intergenic 45.0%
CGGAGAAATCGAAGGAAAAG+GGG - chr5_4:16237983-16238002 None:intergenic 45.0%
GCGGAGAAATCGAAGGAAAA+GGG - chr5_4:16237984-16238003 None:intergenic 45.0%
TGCGGAGAAATCGAAGGAAA+AGG - chr5_4:16237985-16238004 None:intergenic 45.0%
CAACATTTGCACGTGTGTTC+AGG - chr5_4:16238353-16238372 None:intergenic 45.0%
CACTACACATCAGTCATGCT+TGG - chr5_4:16238395-16238414 None:intergenic 45.0%
CAAGCATGACTGATGTGTAG+TGG + chr5_4:16238393-16238412 Msa0840500:intron 45.0%
!! GGTTGGAGTGGCTATTTTCA+AGG - chr5_4:16238484-16238503 None:intergenic 45.0%
CACTACACATCAGTCATGGT+TGG - chr5_4:16238501-16238520 None:intergenic 45.0%
CAACCATGACTGATGTGTAG+TGG + chr5_4:16238499-16238518 Msa0840500:intron 45.0%
AACCCACTACACATCAGTCA+TGG - chr5_4:16238505-16238524 None:intergenic 45.0%
!! TGGAGTCGTGGCTATTTTCA+AGG - chr5_4:16238537-16238556 None:intergenic 45.0%
! GGTTGGTTAGTGATGACAGA+TGG - chr5_4:16239075-16239094 None:intergenic 45.0%
GTTTGTCGAGCACTAAACGT+GGG - chr5_4:16239433-16239452 None:intergenic 45.0%
GGAACATAACAGCTACCTCT+TGG - chr5_4:16239615-16239634 None:intergenic 45.0%
!! TTTGGCTTGCTTGAGAGTGA+AGG - chr5_4:16239670-16239689 None:intergenic 45.0%
GACTAGGGTTTAGTGGAGTT+TGG - chr5_4:16239743-16239762 None:intergenic 45.0%
TACAACGTCGAGAAAAGGGT+CGG - chr5_4:16230649-16230668 None:intergenic 45.0%
!! GCCCTTATTGATTCCTCTTC+TGG + chr5_4:16240023-16240042 Msa0840500:intron 45.0%
AGAAATGGAAGTCCCAGAAG+AGG - chr5_4:16240039-16240058 None:intergenic 45.0%
ATGGTGTAACAACAGCACCT+AGG - chr5_4:16230878-16230897 None:intergenic 45.0%
CGTAAGCAGGTTAATGACTG+TGG + chr5_4:16230927-16230946 Msa0840500:five_prime_UTR 45.0%
GCTGTCAATGCCGACAATAT+CGG - chr5_4:16240752-16240771 None:intergenic 45.0%
! TTGCAGAGTTTGAGACAGGT+CGG + chr5_4:16231482-16231501 Msa0840500:five_prime_UTR 45.0%
AGGGTTGTTAGCTCCAAACA+TGG + chr5_4:16231779-16231798 Msa0840500:five_prime_UTR 45.0%
GTTGTTAGCTCCAAACATGG+AGG + chr5_4:16231782-16231801 Msa0840500:five_prime_UTR 45.0%
TCCAAACATGGAGGCAAAAG+TGG + chr5_4:16231791-16231810 Msa0840500:five_prime_UTR 45.0%
!! ACCACTTTTGCCTCCATGTT+TGG - chr5_4:16231795-16231814 None:intergenic 45.0%
GAAAAGGTTCAAGTGGCTTG+AGG - chr5_4:16232065-16232084 None:intergenic 45.0%
ACAGGCAGAAAAGGTTCAAG+TGG - chr5_4:16232072-16232091 None:intergenic 45.0%
AGCAACAAGACAGGCAGAAA+AGG - chr5_4:16232081-16232100 None:intergenic 45.0%
ACAGCTTCTAAATCAGCAGG+AGG - chr5_4:16232379-16232398 None:intergenic 45.0%
TTCTTGACCACAAATGCCAC+TGG - chr5_4:16241921-16241940 None:intergenic 45.0%
!! TATCGACTTCGTTGCTAAGC+AGG + chr5_4:16241971-16241990 Msa0840500:CDS 45.0%
TCTTCACCGACAAGATTCCA+AGG + chr5_4:16232780-16232799 Msa0840500:five_prime_UTR 45.0%
CACAGACCTTGGAATCTTGT+CGG - chr5_4:16232789-16232808 None:intergenic 45.0%
AAGATTCCAAGGTCTGTGAC+TGG + chr5_4:16232791-16232810 Msa0840500:five_prime_UTR 45.0%
AGATTCCAAGGTCTGTGACT+GGG + chr5_4:16232792-16232811 Msa0840500:five_prime_UTR 45.0%
! AGTTTCTGAGTTGCTTTCGG+AGG - chr5_4:16232823-16232842 None:intergenic 45.0%
!! ACTCTAAGGCATGCATAGTG+GGG + chr5_4:16242213-16242232 Msa0840500:exon 45.0%
!! TAATAAATATAAATACTAAA+AGG + chr5_4:16231923-16231942 Msa0840500:intron 5.0%
!! AAAAAATATATATAACAAAA+TGG + chr5_4:16233702-16233721 Msa0840500:intron 5.0%
!!! ATACATTTTTATTATTTTTT+TGG - chr5_4:16239494-16239513 None:intergenic 5.0%
!! TAATAAATATAAATACTAAA+AGG + chr5_4:16231923-16231942 Msa0840500:intron 5.0%
GGGCTAAAACCCCATCATGA+GGG - chr5_4:16230689-16230708 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG - chr5_4:16230690-16230709 None:intergenic 50.0%
GGTACTACTGGTGTGAGCAA+AGG + chr5_4:16231152-16231171 Msa0840500:five_prime_UTR 50.0%
GCTGTCAACGCCGACAATAT+CGG - chr5_4:16231434-16231453 None:intergenic 50.0%
ATGACTGAGTCGGGTGCATT+AGG + chr5_4:16231711-16231730 Msa0840500:five_prime_UTR 50.0%
AAAGCTCACCACTTCTGCCT+GGG - chr5_4:16231845-16231864 None:intergenic 50.0%
! AGTGGTGAGCTTTGGTTGAG+AGG + chr5_4:16231852-16231871 Msa0840500:five_prime_UTR 50.0%
! GTGGTGAGCTTTGGTTGAGA+GGG + chr5_4:16231853-16231872 Msa0840500:five_prime_UTR 50.0%
ACGGCGACATCCACTATTTC+AGG - chr5_4:16232415-16232434 None:intergenic 50.0%
!! ATAGTGGATGTCGCCGTTAC+AGG + chr5_4:16232418-16232437 Msa0840500:five_prime_UTR 50.0%
! TAGTGGATGTCGCCGTTACA+GGG + chr5_4:16232419-16232438 Msa0840500:five_prime_UTR 50.0%
AGTGCGAAGGATGAAGAAGC+TGG + chr5_4:16232532-16232551 Msa0840500:intron 50.0%
GTGCGAAGGATGAAGAAGCT+GGG + chr5_4:16232533-16232552 Msa0840500:intron 50.0%
TGCGAAGGATGAAGAAGCTG+GGG + chr5_4:16232534-16232553 Msa0840500:five_prime_UTR 50.0%
GGAGATTCCAGTGGGATTTG+TGG + chr5_4:16232555-16232574 Msa0840500:five_prime_UTR 50.0%
GCAGGTTGCTCCATTCAAGA+AGG + chr5_4:16232745-16232764 Msa0840500:intron 50.0%
ATCTTCCCAGTCACAGACCT+TGG - chr5_4:16232800-16232819 None:intergenic 50.0%
TGCATGCAGATGCACGAGAT+AGG + chr5_4:16233147-16233166 Msa0840500:intron 50.0%
CCTAATGTACTGAGCCGAGT+TGG - chr5_4:16233855-16233874 None:intergenic 50.0%
CCAACTCGGCTCAGTACATT+AGG + chr5_4:16233852-16233871 Msa0840500:intron 50.0%
! TATTTGGGGCTGCCTATAGG+TGG - chr5_4:16234137-16234156 None:intergenic 50.0%
! GTGTATTTGGGGCTGCCTAT+AGG - chr5_4:16234140-16234159 None:intergenic 50.0%
GGCAGCCCCAAATACACAAA+AGG + chr5_4:16234143-16234162 Msa0840500:intron 50.0%
TCAGTCTTGGTTGACTGAGG+CGG - chr5_4:16234201-16234220 None:intergenic 50.0%
GCGGCCAAGAGAAAGAGAAA+AGG + chr5_4:16234461-16234480 Msa0840500:intron 50.0%
! TTGAAGAGGGGTTTGAGGCA+AGG - chr5_4:16234500-16234519 None:intergenic 50.0%
ATCCACTTCCGCCATAGAAC+CGG + chr5_4:16234587-16234606 Msa0840500:intron 50.0%
! AGATGGGTTTCCCGGTTCTA+TGG - chr5_4:16234601-16234620 None:intergenic 50.0%
TCTGGTGGCAAATGAGGTTG+TGG - chr5_4:16234726-16234745 None:intergenic 50.0%
TGGAGTTTCATAGGAACGGG+AGG - chr5_4:16234961-16234980 None:intergenic 50.0%
! TGATGTGATGCGGTTTCTGG+TGG - chr5_4:16234981-16235000 None:intergenic 50.0%
TATAAATGCCCTGGCCCTGA+TGG - chr5_4:16235049-16235068 None:intergenic 50.0%
GTTATCACAATCCCACACCG+CGG + chr5_4:16235069-16235088 Msa0840500:intron 50.0%
CCCTCTCTATGAGACAACGA+TGG + chr5_4:16235133-16235152 Msa0840500:intron 50.0%
CCCATCGTTGTCTCATAGAG+AGG - chr5_4:16235137-16235156 None:intergenic 50.0%
GAGACAACGATGGGAACTGA+AGG + chr5_4:16235143-16235162 Msa0840500:intron 50.0%
AACTGAAGGGCTGCCATAGT+AGG + chr5_4:16235157-16235176 Msa0840500:intron 50.0%
TGATGTCGAGCGTCCTACTA+TGG - chr5_4:16235173-16235192 None:intergenic 50.0%
!!! CGACAGTGTTTTGACTGAGG+GGG - chr5_4:16235251-16235270 None:intergenic 50.0%
!! CCTTTTGGAGAGTGAGCTAG+AGG - chr5_4:16235443-16235462 None:intergenic 50.0%
! CCTCTAGCTCACTCTCCAAA+AGG + chr5_4:16235440-16235459 Msa0840500:intron 50.0%
! TGGCATTCCTTTCAGGTGGA+GGG - chr5_4:16235616-16235635 None:intergenic 50.0%
TCAGTGGCATTCCTTTCAGG+TGG - chr5_4:16235620-16235639 None:intergenic 50.0%
TACCATTGCTGCCTTGCGTA+GGG + chr5_4:16235916-16235935 Msa0840500:intron 50.0%
GTCAGTAGATCAGTGGGGAA+TGG + chr5_4:16235959-16235978 Msa0840500:intron 50.0%
AGAATGGTGAGGCTTGGAAG+TGG + chr5_4:16236113-16236132 Msa0840500:intron 50.0%
GTTTGCATGGGAAGAGGAAC+AGG + chr5_4:16236147-16236166 Msa0840500:intron 50.0%
! GACTTTGCAGGTTGACAAGG+AGG + chr5_4:16236202-16236221 Msa0840500:intron 50.0%
TCAACTTCCTGTTGTCGCAC+TGG + chr5_4:16236295-16236314 Msa0840500:intron 50.0%
CGCAGCAAGTTATCTCTGGT+TGG - chr5_4:16236401-16236420 None:intergenic 50.0%
! TGTCTGTGTGTTACTGGGTG+CGG + chr5_4:16236446-16236465 Msa0840500:intron 50.0%
TGATACATCTAACGAGGCGG+CGG - chr5_4:16236561-16236580 None:intergenic 50.0%
!!! TTTTGGTGGTGGTGGTTCTC+AGG + chr5_4:16236601-16236620 Msa0840500:intron 50.0%
CTGCTCGATTACGCGAATTG+TGG + chr5_4:16236712-16236731 Msa0840500:intron 50.0%
CCGGTACCCAACATTATGAG+GGG - chr5_4:16236821-16236840 None:intergenic 50.0%
CCCCTCATAATGTTGGGTAC+CGG + chr5_4:16236818-16236837 Msa0840500:intron 50.0%
AGACCCAATAGTCGTTGGTG+GGG - chr5_4:16237378-16237397 None:intergenic 50.0%
AGTGCTTGGATGGAGGCAAT+GGG - chr5_4:16237759-16237778 None:intergenic 50.0%
AAGTGCTTGGATGGAGGCAA+TGG - chr5_4:16237760-16237779 None:intergenic 50.0%
! TGGTCAAAGTGCTTGGATGG+AGG - chr5_4:16237766-16237785 None:intergenic 50.0%
! GGTCAAGTGGTCAAAGTGCT+TGG - chr5_4:16237773-16237792 None:intergenic 50.0%
GGGGAAGAAAGGGATGGAAA+TGG - chr5_4:16237963-16237982 None:intergenic 50.0%
GAAAAGGGGGAAGAAAGGGA+TGG - chr5_4:16237969-16237988 None:intergenic 50.0%
CGAAGGAAAAGGGGGAAGAA+AGG - chr5_4:16237974-16237993 None:intergenic 50.0%
!! GCTTGGCGTGGCTATTTTCT+AGG - chr5_4:16238378-16238397 None:intergenic 50.0%
CACATCAGTCATGGTTGGAG+TGG - chr5_4:16238496-16238515 None:intergenic 50.0%
GAAAAACCACCCACGATGCT+TGG - chr5_4:16238557-16238576 None:intergenic 50.0%
AGAAGTGAGAGAGAGGGAGA+TGG - chr5_4:16238982-16239001 None:intergenic 50.0%
TGCCATCAATATGACCCGTG+CGG + chr5_4:16239350-16239369 Msa0840500:intron 50.0%
CGTTTGTCGAGCACTAAACG+TGG - chr5_4:16239434-16239453 None:intergenic 50.0%
GGGCTAAAACCCCATCATGA+GGG - chr5_4:16230689-16230708 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG - chr5_4:16230690-16230709 None:intergenic 50.0%
GTCAATGCCGACAATATCGG+TGG - chr5_4:16240749-16240768 None:intergenic 50.0%
!! ATTGTCGGCATTGACAGCGA+AGG + chr5_4:16240754-16240773 Msa0840500:CDS 50.0%
! GCATTGACAGCGAAGGCAAA+GGG + chr5_4:16240761-16240780 Msa0840500:CDS 50.0%
! GCGAAGGCAAAGGGTGTAAA+TGG + chr5_4:16240770-16240789 Msa0840500:intron 50.0%
ATGACTGAGTCGGGTGCATT+AGG + chr5_4:16231711-16231730 Msa0840500:five_prime_UTR 50.0%
AAAGCTCACCACTTCTGCCT+GGG - chr5_4:16231845-16231864 None:intergenic 50.0%
! AGTGGTGAGCTTTGGTTGAG+AGG + chr5_4:16231852-16231871 Msa0840500:five_prime_UTR 50.0%
ACGGCGACATCCACTATTTC+AGG - chr5_4:16232415-16232434 None:intergenic 50.0%
!! ATAGTGGATGTCGCCGTTAC+AGG + chr5_4:16232418-16232437 Msa0840500:five_prime_UTR 50.0%
! TAGTGGATGTCGCCGTTACA+GGG + chr5_4:16232419-16232438 Msa0840500:five_prime_UTR 50.0%
AGTGCCAAGGATGAAGAAGC+TGG + chr5_4:16241888-16241907 Msa0840500:intron 50.0%
GTGCCAAGGATGAAGAAGCT+GGG + chr5_4:16241889-16241908 Msa0840500:intron 50.0%
TGCCAAGGATGAAGAAGCTG+GGG + chr5_4:16241890-16241909 Msa0840500:CDS 50.0%
GGAGATTCCAGTGGCATTTG+TGG + chr5_4:16241911-16241930 Msa0840500:CDS 50.0%
GCAGGTTGCTCCATTCAAGA+AGG + chr5_4:16232745-16232764 Msa0840500:intron 50.0%
ATCTTCCCAGTCACAGACCT+TGG - chr5_4:16232800-16232819 None:intergenic 50.0%
ACGTCGAGAAAAGGGTCGGT+CGG - chr5_4:16230645-16230664 None:intergenic 55.0%
GTCAACGCCGACAATATCGG+TGG - chr5_4:16231431-16231450 None:intergenic 55.0%
!! ATTGTCGGCGTTGACAGCGA+AGG + chr5_4:16231436-16231455 Msa0840500:five_prime_UTR 55.0%
! GCGTTGACAGCGAAGGCAAA+GGG + chr5_4:16231443-16231462 Msa0840500:five_prime_UTR 55.0%
! GCGAAGGCAAAGGGTGCAAA+TGG + chr5_4:16231452-16231471 Msa0840500:five_prime_UTR 55.0%
! TCGGGTGCATTAGGAGCATG+CGG + chr5_4:16231720-16231739 Msa0840500:five_prime_UTR 55.0%
! TTTTTGCCCCCAGGCAGAAG+TGG + chr5_4:16231834-16231853 Msa0840500:five_prime_UTR 55.0%
AAGCTCACCACTTCTGCCTG+GGG - chr5_4:16231844-16231863 None:intergenic 55.0%
CAAAGCTCACCACTTCTGCC+TGG - chr5_4:16231846-16231865 None:intergenic 55.0%
CAGGCAGAAGTGGTGAGCTT+TGG + chr5_4:16231844-16231863 Msa0840500:five_prime_UTR 55.0%
AGAAGCTGGGGAGATTCCAG+TGG + chr5_4:16232546-16232565 Msa0840500:five_prime_UTR 55.0%
GAAGCTGGGGAGATTCCAGT+GGG + chr5_4:16232547-16232566 Msa0840500:five_prime_UTR 55.0%
!!! GGCGCGTCGGTTGTCTTTTT+GGG - chr5_4:16234111-16234130 None:intergenic 55.0%
!!! AGGCGCGTCGGTTGTCTTTT+TGG - chr5_4:16234112-16234131 None:intergenic 55.0%
AGCACGCATCGCTCGAACAT+TGG + chr5_4:16234298-16234317 Msa0840500:intron 55.0%
CTCTTTCTCTTGGCCGCAGA+GGG - chr5_4:16234458-16234477 None:intergenic 55.0%
TCTCTTTCTCTTGGCCGCAG+AGG - chr5_4:16234459-16234478 None:intergenic 55.0%
TCCACTTCCGCCATAGAACC+GGG + chr5_4:16234588-16234607 Msa0840500:intron 55.0%
TGGGTTTCCCGGTTCTATGG+CGG - chr5_4:16234598-16234617 None:intergenic 55.0%
ATGAGGTTGTGGATGACGCC+AGG - chr5_4:16234715-16234734 None:intergenic 55.0%
CTAAGGTTGAGAGCCCGCAA+CGG - chr5_4:16234898-16234917 None:intergenic 55.0%
AGGAACGGGAGGCTTACCAA+AGG - chr5_4:16234950-16234969 None:intergenic 55.0%
! AATCTCGGGCTCGTTGGTTG+CGG - chr5_4:16235354-16235373 None:intergenic 55.0%
! AGGTGAGACGGAGGACCTTT+TGG - chr5_4:16235458-16235477 None:intergenic 55.0%
! TTCCTTTCAGGTGGAGGGGT+GGG - chr5_4:16235611-16235630 None:intergenic 55.0%
! ATTCCTTTCAGGTGGAGGGG+TGG - chr5_4:16235612-16235631 None:intergenic 55.0%
! GGCATTCCTTTCAGGTGGAG+GGG - chr5_4:16235615-16235634 None:intergenic 55.0%
! GTGGCATTCCTTTCAGGTGG+AGG - chr5_4:16235617-16235636 None:intergenic 55.0%
GAGGGTGGTAGGTTGTTGGA+GGG + chr5_4:16235866-16235885 Msa0840500:intron 55.0%
GTGGTAGGTTGTTGGAGGGT+GGG + chr5_4:16235870-16235889 Msa0840500:intron 55.0%
GTACCATTGCTGCCTTGCGT+AGG + chr5_4:16235915-16235934 Msa0840500:intron 55.0%
TTTGTGGTCGGATGTGTGGG+TGG + chr5_4:16235994-16236013 Msa0840500:intron 55.0%
TTGTGGTCGGATGTGTGGGT+GGG + chr5_4:16235995-16236014 Msa0840500:intron 55.0%
! GTGGGGTGTCCTTTAGGGAA+AGG + chr5_4:16236017-16236036 Msa0840500:intron 55.0%
! CAGCTGGGTTAGGGTGAGAA+TGG + chr5_4:16236097-16236116 Msa0840500:intron 55.0%
GGGTTAGGGTGAGAATGGTG+AGG + chr5_4:16236102-16236121 Msa0840500:intron 55.0%
AGGGTGAGAATGGTGAGGCT+TGG + chr5_4:16236107-16236126 Msa0840500:intron 55.0%
ATGGTGAGGCTTGGAAGTGG+AGG + chr5_4:16236116-16236135 Msa0840500:intron 55.0%
GAGGCTGTTTGCATGGGAAG+AGG + chr5_4:16236141-16236160 Msa0840500:intron 55.0%
TGCATGGGAAGAGGAACAGG+TGG + chr5_4:16236150-16236169 Msa0840500:intron 55.0%
GCATGGGAAGAGGAACAGGT+GGG + chr5_4:16236151-16236170 Msa0840500:intron 55.0%
CATGGGAAGAGGAACAGGTG+GGG + chr5_4:16236152-16236171 Msa0840500:intron 55.0%
ATGGGAAGAGGAACAGGTGG+GGG + chr5_4:16236153-16236172 Msa0840500:intron 55.0%
ACTTCCTGTTGTCGCACTGG+TGG + chr5_4:16236298-16236317 Msa0840500:intron 55.0%
ACATCCACCAGTGCGACAAC+AGG - chr5_4:16236305-16236324 None:intergenic 55.0%
ACGCCGCAGCAAGTTATCTC+TGG - chr5_4:16236405-16236424 None:intergenic 55.0%
GGGGACTAAGCCACCAACTA+TGG - chr5_4:16236802-16236821 None:intergenic 55.0%
TCCTTGGCACACCTTGTGCT+AGG + chr5_4:16236923-16236942 Msa0840500:intron 55.0%
TCCTAGCACAAGGTGTGCCA+AGG - chr5_4:16236927-16236946 None:intergenic 55.0%
TGGCACACCTTGTGCTAGGA+AGG + chr5_4:16236927-16236946 Msa0840500:intron 55.0%
TCAGCCCCACCAACGACTAT+TGG + chr5_4:16237371-16237390 Msa0840500:intron 55.0%
CAGCCCCACCAACGACTATT+GGG + chr5_4:16237372-16237391 Msa0840500:intron 55.0%
CACATCAGTCATGCTTGGCG+TGG - chr5_4:16238390-16238409 None:intergenic 55.0%
TGCCGCACGGGTCATATTGA+TGG - chr5_4:16239355-16239374 None:intergenic 55.0%
ACGTCGAGAAAAGGGTCGGT+CGG - chr5_4:16230645-16230664 None:intergenic 55.0%
CCTCGCCAAAAGCTCAACCA+TGG - chr5_4:16240525-16240544 None:intergenic 55.0%
! CCATGGTTGAGCTTTTGGCG+AGG + chr5_4:16240522-16240541 Msa0840500:CDS 55.0%
!! GGCATTGACAGCGAAGGCAA+AGG + chr5_4:16240760-16240779 Msa0840500:CDS 55.0%
! TCGGGTGCATTAGGAGCATG+CGG + chr5_4:16231720-16231739 Msa0840500:five_prime_UTR 55.0%
! TTTTTGCCCCCAGGCAGAAG+TGG + chr5_4:16231834-16231853 Msa0840500:five_prime_UTR 55.0%
AAGCTCACCACTTCTGCCTG+GGG - chr5_4:16231844-16231863 None:intergenic 55.0%
CAAAGCTCACCACTTCTGCC+TGG - chr5_4:16231846-16231865 None:intergenic 55.0%
CAGGCAGAAGTGGTGAGCTT+TGG + chr5_4:16231844-16231863 Msa0840500:five_prime_UTR 55.0%
CTCCCCAGCTTCTTCATCCT+TGG - chr5_4:16232539-16232558 None:intergenic 55.0%
AGAAGCTGGGGAGATTCCAG+TGG + chr5_4:16232546-16232565 Msa0840500:five_prime_UTR 55.0%
GGTTCGCGCGAACCAATTCG+CGG - chr5_4:16230488-16230507 None:intergenic 60.0%
CGAGAAAAGGGTCGGTCGGA+AGG - chr5_4:16230641-16230660 None:intergenic 60.0%
!! GGCGTTGACAGCGAAGGCAA+AGG + chr5_4:16231442-16231461 Msa0840500:five_prime_UTR 60.0%
! AGTGGTGCGTTTTTGCCCCC+AGG + chr5_4:16231825-16231844 Msa0840500:five_prime_UTR 60.0%
AGCTCACCACTTCTGCCTGG+GGG - chr5_4:16231843-16231862 None:intergenic 60.0%
CTATAGGTGGTGAGGCGCGT+CGG - chr5_4:16234124-16234143 None:intergenic 60.0%
! TCCCGGTTCTATGGCGGAAG+TGG - chr5_4:16234592-16234611 None:intergenic 60.0%
CGTTGCGGGCTCTCAACCTT+AGG + chr5_4:16234896-16234915 Msa0840500:intron 60.0%
TGTAGAGGAGGTCAAGGCCG+CGG - chr5_4:16235089-16235108 None:intergenic 60.0%
! ATCTCGGGCTCGTTGGTTGC+GGG - chr5_4:16235353-16235372 None:intergenic 60.0%
! TCCTTTCAGGTGGAGGGGTG+GGG - chr5_4:16235610-16235629 None:intergenic 60.0%
CGAGGAGGGTGGTAGGTTGT+TGG + chr5_4:16235862-16235881 Msa0840500:intron 60.0%
GGAGGGTGGTAGGTTGTTGG+AGG + chr5_4:16235865-16235884 Msa0840500:intron 60.0%
GGTGGTAGGTTGTTGGAGGG+TGG + chr5_4:16235869-16235888 Msa0840500:intron 60.0%
GTAGGTTGTTGGAGGGTGGG+AGG + chr5_4:16235873-16235892 Msa0840500:intron 60.0%
AATGGTACGCCACCAAGCCG+AGG - chr5_4:16235903-16235922 None:intergenic 60.0%
CTCCCTACGCAAGGCAGCAA+TGG - chr5_4:16235921-16235940 None:intergenic 60.0%
CATTGCTGCCTTGCGTAGGG+AGG + chr5_4:16235919-16235938 Msa0840500:intron 60.0%
AAACCACGCCTCCCTACGCA+AGG - chr5_4:16235930-16235949 None:intergenic 60.0%
! GGTGGGTGGGGTGTCCTTTA+GGG + chr5_4:16236012-16236031 Msa0840500:intron 60.0%
GTGAGGCTTGGAAGTGGAGG+CGG + chr5_4:16236119-16236138 Msa0840500:intron 60.0%
GAGGCGGAGGCTGTTTGCAT+GGG + chr5_4:16236135-16236154 Msa0840500:intron 60.0%
TGGGAAGAGGAACAGGTGGG+GGG + chr5_4:16236154-16236173 Msa0840500:intron 60.0%
TGTTACTGGGTGCGGCTCTC+CGG + chr5_4:16236454-16236473 Msa0840500:intron 60.0%
CGGTGGAGACGCCAATCCAA+CGG - chr5_4:16236541-16236560 None:intergenic 60.0%
TACATCTAACGAGGCGGCGG+TGG - chr5_4:16236558-16236577 None:intergenic 60.0%
!! GTGGTGGTGGTTCTCAGGTG+CGG + chr5_4:16236606-16236625 Msa0840500:intron 60.0%
! AGCCACGACTCCAAGCATCG+TGG + chr5_4:16238544-16238563 Msa0840500:intron 60.0%
! GCCACGACTCCAAGCATCGT+GGG + chr5_4:16238545-16238564 Msa0840500:intron 60.0%
ACCCACGATGCTTGGAGTCG+TGG - chr5_4:16238549-16238568 None:intergenic 60.0%
! ACGACTCCAAGCATCGTGGG+TGG + chr5_4:16238548-16238567 Msa0840500:intron 60.0%
CGAGAAAAGGGTCGGTCGGA+AGG - chr5_4:16230641-16230660 None:intergenic 60.0%
! AGTGGTGCGTTTTTGCCCCC+AGG + chr5_4:16231825-16231844 Msa0840500:five_prime_UTR 60.0%
AGCTCACCACTTCTGCCTGG+GGG - chr5_4:16231843-16231862 None:intergenic 60.0%
CGACGCGCCTCACCACCTAT+AGG + chr5_4:16234122-16234141 Msa0840500:intron 65.0%
GGGGCTGCCTATAGGTGGTG+AGG - chr5_4:16234132-16234151 None:intergenic 65.0%
GGCAGCAATCTCGGGCTCGT+TGG - chr5_4:16235360-16235379 None:intergenic 65.0%
! TTTCAGGTGGAGGGGTGGGG+CGG - chr5_4:16235607-16235626 None:intergenic 65.0%
!! GGTATAGGGTGCTGTCGGCG+AGG + chr5_4:16235834-16235853 Msa0840500:intron 65.0%
!! AGGGTGCTGTCGGCGAGGTA+TGG + chr5_4:16235839-16235858 Msa0840500:intron 65.0%
TCGGCGAGGTATGGCGAGGA+GGG + chr5_4:16235848-16235867 Msa0840500:intron 65.0%
GGTATGGCGAGGAGGGTGGT+AGG + chr5_4:16235855-16235874 Msa0840500:intron 65.0%
GGAGGGTGGGAGGACAACCT+CGG + chr5_4:16235883-16235902 Msa0840500:intron 65.0%
GTGGGAGGACAACCTCGGCT+TGG + chr5_4:16235888-16235907 Msa0840500:intron 65.0%
!! GGAGGACAACCTCGGCTTGG+TGG + chr5_4:16235891-16235910 Msa0840500:intron 65.0%
TGGTCGGATGTGTGGGTGGG+TGG + chr5_4:16235998-16236017 Msa0840500:intron 65.0%
GGTCGGATGTGTGGGTGGGT+GGG + chr5_4:16235999-16236018 Msa0840500:intron 65.0%
GTCGGATGTGTGGGTGGGTG+GGG + chr5_4:16236000-16236019 Msa0840500:intron 65.0%
! GGGTGGGTGGGGTGTCCTTT+AGG + chr5_4:16236011-16236030 Msa0840500:intron 65.0%
AGGCTTGGAAGTGGAGGCGG+AGG + chr5_4:16236122-16236141 Msa0840500:intron 65.0%
GGAGGCGGAGGCTGTTTGCA+TGG + chr5_4:16236134-16236153 Msa0840500:intron 65.0%
TATGACCCGTGCGGCAGCAC+AGG + chr5_4:16239359-16239378 Msa0840500:intron 65.0%
TTGCACCTGTGCTGCCGCAC+GGG - chr5_4:16239367-16239386 None:intergenic 65.0%
CTTGCACCTGTGCTGCCGCA+CGG - chr5_4:16239368-16239387 None:intergenic 65.0%
GGGTCGGTCGGAAGGCTCCT+AGG - chr5_4:16230633-16230652 None:intergenic 70.0%
GGAGGTCAAGGCCGCGGTGT+GGG - chr5_4:16235083-16235102 None:intergenic 70.0%
AGGAGGTCAAGGCCGCGGTG+TGG - chr5_4:16235084-16235103 None:intergenic 70.0%
! CGGGCTCGTTGGTTGCGGGA+AGG - chr5_4:16235349-16235368 None:intergenic 70.0%
GCCCCACCCCTCCACCTGAA+AGG + chr5_4:16235606-16235625 Msa0840500:intron 70.0%
GCTGTCGGCGAGGTATGGCG+AGG + chr5_4:16235844-16235863 Msa0840500:intron 70.0%
GTCGGCGAGGTATGGCGAGG+AGG + chr5_4:16235847-16235866 Msa0840500:intron 70.0%
GCGAGGTATGGCGAGGAGGG+TGG + chr5_4:16235851-16235870 Msa0840500:intron 70.0%
CTGCCTTGCGTAGGGAGGCG+TGG + chr5_4:16235924-16235943 Msa0840500:intron 70.0%
CGTGCGGCAGCACAGGTGCA+AGG + chr5_4:16239366-16239385 Msa0840500:intron 70.0%
GGGTCGGTCGGAAGGCTCCT+AGG - chr5_4:16230633-16230652 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 16230478 16242253 16230478 ID=Msa0840500;Name=Msa0840500
chr5_4 mRNA 16230478 16242253 16230478 ID=Msa0840500-mRNA-1;Parent=Msa0840500;Name=Msa0840500-mRNA-1;_AED=0.16;_eAED=0.16;_QI=1750|0.71|0.73|1|0.71|0.66|15|34|462
chr5_4 exon 16230478 16231580 16230478 ID=Msa0840500-mRNA-1:exon:6983;Parent=Msa0840500-mRNA-1
chr5_4 exon 16231702 16231891 16231702 ID=Msa0840500-mRNA-1:exon:6984;Parent=Msa0840500-mRNA-1
chr5_4 exon 16232146 16232291 16232146 ID=Msa0840500-mRNA-1:exon:6985;Parent=Msa0840500-mRNA-1
chr5_4 exon 16232373 16232440 16232373 ID=Msa0840500-mRNA-1:exon:6986;Parent=Msa0840500-mRNA-1
chr5_4 exon 16232534 16232636 16232534 ID=Msa0840500-mRNA-1:exon:6987;Parent=Msa0840500-mRNA-1
chr5_4 exon 16232749 16232895 16232749 ID=Msa0840500-mRNA-1:exon:6988;Parent=Msa0840500-mRNA-1
chr5_4 exon 16240024 16240253 16240024 ID=Msa0840500-mRNA-1:exon:6989;Parent=Msa0840500-mRNA-1
chr5_4 exon 16240305 16240543 16240305 ID=Msa0840500-mRNA-1:exon:6990;Parent=Msa0840500-mRNA-1
chr5_4 exon 16240574 16240784 16240574 ID=Msa0840500-mRNA-1:exon:6991;Parent=Msa0840500-mRNA-1
chr5_4 exon 16240818 16240898 16240818 ID=Msa0840500-mRNA-1:exon:6992;Parent=Msa0840500-mRNA-1
chr5_4 exon 16241020 16241209 16241020 ID=Msa0840500-mRNA-1:exon:6993;Parent=Msa0840500-mRNA-1
chr5_4 exon 16241464 16241609 16241464 ID=Msa0840500-mRNA-1:exon:6994;Parent=Msa0840500-mRNA-1
chr5_4 exon 16241729 16241796 16241729 ID=Msa0840500-mRNA-1:exon:6995;Parent=Msa0840500-mRNA-1
chr5_4 exon 16241890 16241992 16241890 ID=Msa0840500-mRNA-1:exon:6996;Parent=Msa0840500-mRNA-1
chr5_4 exon 16242106 16242253 16242106 ID=Msa0840500-mRNA-1:exon:6997;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16230478 16231580 16230478 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16231702 16231891 16231702 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16232146 16232291 16232146 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16232373 16232440 16232373 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16232534 16232636 16232534 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 five_prime_UTR 16232749 16232888 16232749 ID=Msa0840500-mRNA-1:five_prime_utr;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16232889 16232895 16232889 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16240024 16240253 16240024 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16240305 16240543 16240305 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16240574 16240784 16240574 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16240818 16240898 16240818 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16241020 16241209 16241020 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16241464 16241609 16241464 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16241729 16241796 16241729 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16241890 16241992 16241890 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 CDS 16242106 16242219 16242106 ID=Msa0840500-mRNA-1:cds;Parent=Msa0840500-mRNA-1
chr5_4 three_prime_UTR 16242220 16242253 16242220 ID=Msa0840500-mRNA-1:three_prime_utr;Parent=Msa0840500-mRNA-1
Gene Sequence

>Msa0840500

ATGCATACCCTTATTGATTCCTCTTCTGGGACTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCAATGGCTTCTGGTCTTCATAAAATGGGAGTTTCACAAGGTGGCCTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATTGTACTATTAGGTGTTATGTACCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTTGATGAAATTCGTAAGCAGAAATTAGAACCATTAGGCATTCCTATTATTTCTGTGCCAGAAAATGAAAAGGATTCGATGAATGATTGTTTCTCATGTTTTTTTAACCTGATTTCTGGTAACTTTGTTTTGCCTCAAAATCTGGTTATTAAACAAGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACTGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCCATGGTTGAGCTTTTGGCGAGTTCCAAAAATGTGTATCTAGCTGTTTTGCCGATGTTCCATTTATATGGTTTATCTCTCTTTGCTACGGGATTATTGTCATTGGGTTCTTCAATCGTTGTAATGAGGAAATTTGACATTGATGAGACTATTAGGGTGATCGATAAATATAAAGTTACACACTTTCATCTTGTTCCACCGATATTGTCGGCATTGACAGCGAAGGCAAAGGGTGTCGGCTCTAGTGCAGCGCCTTTAAGCACAAAAGCTATAAATGATTTTGTCCAAGCTCTCCCTAATGTTGATTTTATACAGGTTTATGGAATGACTGAGTCGGGTGCATTAGGAGCATGCGGTTTCAATACAGAAAAATTTCGCAACTATTCTTCACTAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTATATTGGAATAGTGGTGCGTTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGTCCTTCAATTATGAAAGGATACTTGAATAATAAGGAAGCTACAATGTCGACAATTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTATTTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGATTCCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTGGATGTCGCCGTTACAGGTGCCAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTCAAGAAAGTTGGAAGTGTACTTTCTCCAAAGGATGTTATCGACTTCGTTGCTAAGCAGGTTGCTCCATTCAAGAAGGTTCGCAAAGTGGTCTTCACCGACAAGATTCCAAGGTCTGTGACTGGGAAGATCCTCCGAAAGCAACTCAGAAACTGCTTGCCTTCTAAACTCTAA
Protein sequence

>Msa0840500

MHTLIDSSSGTSISYSKLLPLVKSMASGLHKMGVSQGGLVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSVDEIRKQKLEPLGIPIISVPENEKDSMNDCFSCFFNLISGNFVLPQNLVIKQEDTAAILFSSGTTGVSKGVVLTHRNLIAMVELLASSKNVYLAVLPMFHLYGLSLFATGLLSLGSSIVVMRKFDIDETIRVIDKYKVTHFHLVPPILSALTAKAKGVGSSAAPLSTKAINDFVQALPNVDFIQVYGMTESGALGACGFNTEKFRNYSSLGLLAPNMEAKVVYWNSGAFLPPGRSGELWLRGPSIMKGYLNNKEATMSTIDKDGWLHTGDIVYFDQDGYLYLFDRLKEFIKYKGFQIPPADLEAVLILHPEIVDVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTDKIPRSVTGKILRKQLRNCLPSKL*