Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1116930 | XP_013449693.1 | 88.921 | 343 | 11 | 1 | 1 | 316 | 1 | 343 | 0.0 | 601 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1116930 | sp|P93051|ERDL7_ARATH | 60.241 | 332 | 100 | 2 | 12 | 316 | 5 | 331 | 2.31e-136 | 398 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1116930 | A0A072U2V0 | 88.921 | 343 | 11 | 1 | 1 | 316 | 1 | 343 | 0.0 | 601 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011720 | Msa1116930 | 0.818242 | 2.171098e-52 | -8.615850e-47 |
Msa0012440 | Msa1116930 | 0.820724 | 5.897942e-53 | -8.615850e-47 |
Msa0044020 | Msa1116930 | 0.813841 | 2.087019e-51 | -8.615850e-47 |
Msa0053110 | Msa1116930 | 0.806498 | 7.987701e-50 | -8.615850e-47 |
Msa0057240 | Msa1116930 | 0.823167 | 1.602803e-53 | -8.615850e-47 |
Msa0109950 | Msa1116930 | 0.801236 | 9.905284e-49 | -8.615850e-47 |
Msa0120330 | Msa1116930 | 0.805486 | 1.304447e-49 | -8.615850e-47 |
Msa0619980 | Msa1116930 | 0.805585 | 1.243396e-49 | -8.615850e-47 |
Msa0620260 | Msa1116930 | 0.816184 | 6.302892e-52 | -8.615850e-47 |
Msa0625890 | Msa1116930 | 0.819088 | 1.395740e-52 | -8.615850e-47 |
Msa0634270 | Msa1116930 | 0.800296 | 1.540199e-48 | -8.615850e-47 |
Msa0642910 | Msa1116930 | 0.801862 | 7.369953e-49 | -8.615850e-47 |
Msa0663090 | Msa1116930 | 0.810149 | 1.330837e-50 | -8.615850e-47 |
Msa0663680 | Msa1116930 | 0.817219 | 3.694035e-52 | -8.615850e-47 |
Msa0678890 | Msa1116930 | 0.811316 | 7.442349e-51 | -8.615850e-47 |
Msa0706370 | Msa1116930 | 0.816030 | 6.821169e-52 | -8.615850e-47 |
Msa0722940 | Msa1116930 | 0.809278 | 2.047370e-50 | -8.615850e-47 |
Msa0723150 | Msa1116930 | 0.801962 | 7.028918e-49 | -8.615850e-47 |
Msa0740420 | Msa1116930 | 0.810354 | 1.201662e-50 | -8.615850e-47 |
Msa0741900 | Msa1116930 | 0.829646 | 4.582035e-55 | -8.615850e-47 |
Msa0747780 | Msa1116930 | 0.806562 | 7.746242e-50 | -8.615850e-47 |
Msa0761580 | Msa1116930 | 0.804255 | 2.358369e-49 | -8.615850e-47 |
Msa0772020 | Msa1116930 | 0.811586 | 6.502477e-51 | -8.615850e-47 |
Msa0778930 | Msa1116930 | 0.806410 | 8.336966e-50 | -8.615850e-47 |
Msa0810020 | Msa1116930 | 0.839316 | 1.704371e-57 | -8.615850e-47 |
Msa0820670 | Msa1116930 | 0.832099 | 1.146678e-55 | -8.615850e-47 |
Msa0822990 | Msa1116930 | 0.800455 | 1.429767e-48 | -8.615850e-47 |
Msa0840500 | Msa1116930 | 0.813458 | 2.534232e-51 | -8.615850e-47 |
Msa0134130 | Msa1116930 | 0.812302 | 4.540250e-51 | -8.615850e-47 |
Msa0149560 | Msa1116930 | 0.820773 | 5.745747e-53 | -8.615850e-47 |
Msa0203160 | Msa1116930 | 0.830658 | 2.594003e-55 | -8.615850e-47 |
Msa0207180 | Msa1116930 | 0.810953 | 8.917389e-51 | -8.615850e-47 |
Msa0219190 | Msa1116930 | 0.853652 | 2.074641e-61 | -8.615850e-47 |
Msa0227510 | Msa1116930 | 0.812456 | 4.200244e-51 | -8.615850e-47 |
Msa0235890 | Msa1116930 | 0.819260 | 1.275136e-52 | -8.615850e-47 |
Msa0366010 | Msa1116930 | 0.805257 | 1.456599e-49 | -8.615850e-47 |
Msa0370600 | Msa1116930 | 0.808654 | 2.785385e-50 | -8.615850e-47 |
Msa0371540 | Msa1116930 | 0.814979 | 1.169140e-51 | -8.615850e-47 |
Msa0378340 | Msa1116930 | 0.809263 | 2.063068e-50 | -8.615850e-47 |
Msa0380920 | Msa1116930 | 0.824137 | 9.498715e-54 | -8.615850e-47 |
Msa0408630 | Msa1116930 | 0.810296 | 1.236714e-50 | -8.615850e-47 |
Msa0413930 | Msa1116930 | 0.835024 | 2.134710e-56 | -8.615850e-47 |
Msa0418200 | Msa1116930 | 0.824375 | 8.350807e-54 | -8.615850e-47 |
Msa0420540 | Msa1116930 | 0.805061 | 1.600697e-49 | -8.615850e-47 |
Msa0427690 | Msa1116930 | 0.810256 | 1.261895e-50 | -8.615850e-47 |
Msa0430820 | Msa1116930 | 0.837676 | 4.515370e-57 | -8.615850e-47 |
Msa0436460 | Msa1116930 | 0.806533 | 7.853112e-50 | -8.615850e-47 |
Msa0436500 | Msa1116930 | 0.821034 | 5.002133e-53 | -8.615850e-47 |
Msa0458950 | Msa1116930 | 0.832648 | 8.386121e-56 | -8.615850e-47 |
Msa1007350 | Msa1116930 | 0.822366 | 2.461569e-53 | -8.615850e-47 |
Msa1014270 | Msa1116930 | 0.828580 | 8.306480e-55 | -8.615850e-47 |
Msa1018790 | Msa1116930 | 0.803984 | 2.685888e-49 | -8.615850e-47 |
Msa1020710 | Msa1116930 | 0.818672 | 1.734964e-52 | -8.615850e-47 |
Msa1032450 | Msa1116930 | 0.827564 | 1.459020e-54 | -8.615850e-47 |
Msa1033560 | Msa1116930 | 0.811418 | 7.071518e-51 | -8.615850e-47 |
Msa1037920 | Msa1116930 | 0.806370 | 8.502847e-50 | -8.615850e-47 |
Msa1041530 | Msa1116930 | 0.822344 | 2.490750e-53 | -8.615850e-47 |
Msa1042670 | Msa1116930 | 0.830602 | 2.677673e-55 | -8.615850e-47 |
Msa1055260 | Msa1116930 | 0.826767 | 2.264646e-54 | -8.615850e-47 |
Msa1055280 | Msa1116930 | 0.826086 | 3.289329e-54 | -8.615850e-47 |
Msa1073350 | Msa1116930 | 0.822464 | 2.336156e-53 | -8.615850e-47 |
Msa1081570 | Msa1116930 | 0.821367 | 4.191839e-53 | -8.615850e-47 |
Msa1098560 | Msa1116930 | 0.809823 | 1.563872e-50 | -8.615850e-47 |
Msa1106810 | Msa1116930 | 0.803146 | 4.006836e-49 | -8.615850e-47 |
Msa0298240 | Msa1116930 | 0.840476 | 8.496302e-58 | -8.615850e-47 |
Msa0308830 | Msa1116930 | 0.806758 | 7.042619e-50 | -8.615850e-47 |
Msa0315480 | Msa1116930 | 0.808947 | 2.410670e-50 | -8.615850e-47 |
Msa0323610 | Msa1116930 | 0.818056 | 2.391997e-52 | -8.615850e-47 |
Msa1113850 | Msa1116930 | 0.804155 | 2.473693e-49 | -8.615850e-47 |
Msa1116930 | Msa1123880 | 0.828072 | 1.101735e-54 | -8.615850e-47 |
Msa1116930 | Msa1127140 | 0.828634 | 8.062672e-55 | -8.615850e-47 |
Msa1116930 | Msa1136230 | 0.803968 | 2.705779e-49 | -8.615850e-47 |
Msa1116930 | Msa1160400 | 0.807343 | 5.294794e-50 | -8.615850e-47 |
Msa1116930 | Msa1166400 | 0.810990 | 8.757283e-51 | -8.615850e-47 |
Msa1116930 | Msa1169990 | 0.813472 | 2.515835e-51 | -8.615850e-47 |
Msa1116930 | Msa1221260 | 0.800026 | 1.747689e-48 | -8.615850e-47 |
Msa1116930 | Msa1228610 | 0.818794 | 1.627531e-52 | -8.615850e-47 |
Msa1116930 | Msa1254190 | 0.803146 | 4.006520e-49 | -8.615850e-47 |
Msa1116930 | Msa1320740 | 0.807985 | 3.867975e-50 | -8.615850e-47 |
Msa1116930 | Msa1355400 | 0.816183 | 6.306503e-52 | -8.615850e-47 |
Msa1116930 | Msa1379990 | 0.813895 | 2.030179e-51 | -8.615850e-47 |
Msa1116930 | Msa1414930 | 0.800478 | 1.414679e-48 | -8.615850e-47 |
Msa1116930 | Msa1420060 | 0.864193 | 1.449673e-64 | -8.615850e-47 |
Msa1116930 | Msa1429420 | 0.818825 | 1.600936e-52 | -8.615850e-47 |
Msa1116930 | Msa1445790 | 0.830664 | 2.584966e-55 | -8.615850e-47 |
Msa0497420 | Msa1116930 | 0.805409 | 1.353654e-49 | -8.615850e-47 |
Msa0517340 | Msa1116930 | 0.815972 | 7.030630e-52 | -8.615850e-47 |
Msa0518520 | Msa1116930 | 0.805316 | 1.415653e-49 | -8.615850e-47 |
Msa0537920 | Msa1116930 | 0.803176 | 3.950180e-49 | -8.615850e-47 |
Msa0543850 | Msa1116930 | 0.802608 | 5.174491e-49 | -8.615850e-47 |
Msa0557630 | Msa1116930 | 0.805747 | 1.149614e-49 | -8.615850e-47 |
Msa0585730 | Msa1116930 | 0.810715 | 1.004131e-50 | -8.615850e-47 |
Msa0594390 | Msa1116930 | 0.802337 | 5.886208e-49 | -8.615850e-47 |
Msa0850500 | Msa1116930 | 0.818293 | 2.114338e-52 | -8.615850e-47 |
Msa0862100 | Msa1116930 | 0.838696 | 2.466264e-57 | -8.615850e-47 |
Msa0867350 | Msa1116930 | 0.803212 | 3.883410e-49 | -8.615850e-47 |
Msa0870690 | Msa1116930 | 0.804108 | 2.530931e-49 | -8.615850e-47 |
Msa0872310 | Msa1116930 | 0.831442 | 1.665205e-55 | -8.615850e-47 |
Msa0873190 | Msa1116930 | 0.839838 | 1.246743e-57 | -8.615850e-47 |
Msa0885060 | Msa1116930 | 0.801399 | 9.172744e-49 | -8.615850e-47 |
Msa0898730 | Msa1116930 | 0.800408 | 1.461396e-48 | -8.615850e-47 |
Msa0905550 | Msa1116930 | 0.837114 | 6.293035e-57 | -8.615850e-47 |
Msa0937550 | Msa1116930 | 0.818114 | 2.320795e-52 | -8.615850e-47 |
Msa0938430 | Msa1116930 | 0.831619 | 1.506226e-55 | -8.615850e-47 |
Msa0951460 | Msa1116930 | 0.806162 | 9.403323e-50 | -8.615850e-47 |
Msa0951960 | Msa1116930 | 0.808568 | 2.904888e-50 | -8.615850e-47 |
Msa0974750 | Msa1116930 | 0.803628 | 3.183641e-49 | -8.615850e-47 |
Msa0975580 | Msa1116930 | 0.856301 | 3.529052e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1116930 | MtrunA17_Chr7g0259471 | 88.921 | 343 | 11 | 1 | 1 | 316 | 1 | 343 | 0.0 | 601 |
Msa1116930 | MtrunA17_Chr7g0259221 | 81.050 | 343 | 38 | 1 | 1 | 316 | 3 | 345 | 0.0 | 526 |
Msa1116930 | MtrunA17_Chr4g0066581 | 51.613 | 341 | 130 | 4 | 8 | 313 | 13 | 353 | 6.56e-111 | 331 |
Msa1116930 | MtrunA17_Chr2g0286721 | 49.003 | 351 | 144 | 4 | 1 | 316 | 3 | 353 | 3.85e-108 | 324 |
Msa1116930 | MtrunA17_Chr7g0273281 | 46.440 | 323 | 145 | 2 | 22 | 316 | 43 | 365 | 1.54e-89 | 276 |
Msa1116930 | MtrunA17_Chr8g0373181 | 44.444 | 306 | 142 | 2 | 42 | 319 | 49 | 354 | 1.69e-81 | 255 |
Msa1116930 | MtrunA17_Chr1g0155221 | 37.875 | 367 | 188 | 5 | 2 | 330 | 3 | 367 | 2.08e-75 | 240 |
Msa1116930 | MtrunA17_Chr8g0373191 | 39.667 | 300 | 133 | 3 | 45 | 316 | 44 | 323 | 1.05e-65 | 214 |
Msa1116930 | MtrunA17_Chr5g0404191 | 42.798 | 243 | 135 | 2 | 14 | 256 | 28 | 266 | 6.26e-64 | 204 |
Msa1116930 | MtrunA17_Chr7g0273271 | 57.459 | 181 | 77 | 0 | 39 | 219 | 26 | 206 | 2.38e-63 | 200 |
Msa1116930 | MtrunA17_Chr6g0457781 | 29.969 | 327 | 187 | 7 | 46 | 331 | 111 | 436 | 1.48e-34 | 132 |
Msa1116930 | MtrunA17_Chr7g0250881 | 29.870 | 308 | 179 | 8 | 46 | 318 | 71 | 376 | 2.45e-33 | 129 |
Msa1116930 | MtrunA17_Chr2g0303731 | 28.693 | 352 | 196 | 7 | 9 | 317 | 7 | 346 | 6.18e-30 | 119 |
Msa1116930 | MtrunA17_Chr4g0039651 | 27.824 | 363 | 200 | 11 | 11 | 314 | 14 | 373 | 4.89e-29 | 116 |
Msa1116930 | MtrunA17_Chr6g0486021 | 28.319 | 339 | 208 | 7 | 11 | 314 | 18 | 356 | 2.97e-28 | 114 |
Msa1116930 | MtrunA17_Chr4g0021771 | 24.225 | 355 | 221 | 5 | 9 | 316 | 21 | 374 | 4.40e-28 | 114 |
Msa1116930 | MtrunA17_Chr3g0144261 | 36.364 | 198 | 112 | 4 | 68 | 255 | 32 | 225 | 4.92e-28 | 114 |
Msa1116930 | MtrunA17_Chr2g0282031 | 24.731 | 372 | 224 | 4 | 1 | 316 | 1 | 372 | 5.22e-28 | 114 |
Msa1116930 | MtrunA17_Chr8g0376611 | 28.625 | 269 | 152 | 5 | 89 | 317 | 11 | 279 | 6.84e-28 | 113 |
Msa1116930 | MtrunA17_Chr1g0213631 | 32.549 | 255 | 135 | 6 | 100 | 317 | 48 | 302 | 7.21e-28 | 112 |
Msa1116930 | MtrunA17_Chr8g0376601 | 29.644 | 253 | 138 | 4 | 105 | 317 | 94 | 346 | 4.56e-26 | 108 |
Msa1116930 | MtrunA17_Chr4g0034681 | 25.387 | 323 | 176 | 6 | 52 | 317 | 46 | 360 | 1.63e-25 | 106 |
Msa1116930 | MtrunA17_Chr3g0144361 | 26.398 | 322 | 170 | 6 | 52 | 314 | 44 | 357 | 2.15e-25 | 106 |
Msa1116930 | MtrunA17_Chr2g0303701 | 28.627 | 255 | 145 | 5 | 100 | 317 | 89 | 343 | 9.86e-25 | 104 |
Msa1116930 | MtrunA17_Chr6g0485661 | 26.765 | 340 | 193 | 10 | 23 | 315 | 47 | 377 | 1.79e-24 | 103 |
Msa1116930 | MtrunA17_Chr7g0214451 | 29.502 | 261 | 139 | 4 | 98 | 317 | 94 | 350 | 1.96e-24 | 103 |
Msa1116930 | MtrunA17_Chr1g0213611 | 28.657 | 335 | 195 | 8 | 23 | 317 | 65 | 395 | 1.98e-24 | 103 |
Msa1116930 | MtrunA17_Chr3g0115721 | 27.397 | 292 | 169 | 5 | 66 | 314 | 60 | 351 | 9.13e-24 | 101 |
Msa1116930 | MtrunA17_Chr3g0085971 | 27.737 | 274 | 161 | 5 | 77 | 314 | 79 | 351 | 1.17e-23 | 101 |
Msa1116930 | MtrunA17_Chr4g0004821 | 29.236 | 301 | 181 | 4 | 46 | 314 | 42 | 342 | 4.51e-23 | 99.4 |
Msa1116930 | MtrunA17_Chr3g0119401 | 26.647 | 334 | 206 | 8 | 38 | 332 | 90 | 423 | 5.08e-23 | 99.8 |
Msa1116930 | MtrunA17_Chr1g0164871 | 27.378 | 347 | 192 | 9 | 27 | 314 | 6 | 351 | 8.48e-23 | 99.0 |
Msa1116930 | MtrunA17_Chr1g0164851 | 27.378 | 347 | 192 | 9 | 27 | 314 | 6 | 351 | 9.69e-23 | 99.0 |
Msa1116930 | MtrunA17_Chr8g0376631 | 26.648 | 349 | 201 | 7 | 9 | 314 | 7 | 343 | 1.86e-22 | 98.2 |
Msa1116930 | MtrunA17_Chr3g0115741 | 26.389 | 288 | 172 | 5 | 77 | 329 | 82 | 364 | 3.12e-22 | 97.4 |
Msa1116930 | MtrunA17_Chr3g0115711 | 28.044 | 271 | 159 | 5 | 80 | 315 | 82 | 351 | 3.94e-22 | 97.1 |
Msa1116930 | MtrunA17_Chr5g0432581 | 25.070 | 355 | 197 | 9 | 21 | 316 | 6 | 350 | 6.28e-22 | 96.3 |
Msa1116930 | MtrunA17_Chr4g0032021 | 29.245 | 318 | 168 | 10 | 52 | 314 | 112 | 427 | 6.51e-22 | 96.7 |
Msa1116930 | MtrunA17_Chr5g0437021 | 28.671 | 286 | 168 | 6 | 65 | 314 | 66 | 351 | 9.33e-22 | 95.9 |
Msa1116930 | MtrunA17_Chr3g0115751 | 26.027 | 292 | 173 | 5 | 66 | 314 | 65 | 356 | 1.64e-21 | 95.1 |
Msa1116930 | MtrunA17_Chr1g0205691 | 26.950 | 282 | 168 | 5 | 80 | 323 | 83 | 364 | 7.70e-21 | 93.2 |
Msa1116930 | MtrunA17_Chr5g0420841 | 27.143 | 350 | 191 | 10 | 28 | 314 | 3 | 351 | 9.35e-21 | 92.8 |
Msa1116930 | MtrunA17_Chr1g0205681 | 26.740 | 273 | 165 | 3 | 77 | 314 | 81 | 353 | 1.10e-20 | 92.8 |
Msa1116930 | MtrunA17_Chr3g0115781 | 23.677 | 359 | 215 | 6 | 25 | 329 | 10 | 363 | 1.77e-20 | 92.0 |
Msa1116930 | MtrunA17_Chr5g0394341 | 27.305 | 282 | 167 | 5 | 80 | 323 | 83 | 364 | 2.05e-20 | 92.0 |
Msa1116930 | MtrunA17_Chr8g0373531 | 27.160 | 243 | 161 | 4 | 25 | 255 | 4 | 242 | 3.04e-20 | 91.3 |
Msa1116930 | MtrunA17_Chr5g0419321 | 31.156 | 199 | 127 | 4 | 54 | 245 | 50 | 245 | 3.23e-20 | 91.7 |
Msa1116930 | MtrunA17_Chr2g0290181 | 27.899 | 276 | 149 | 7 | 98 | 330 | 88 | 356 | 3.65e-20 | 91.3 |
Msa1116930 | MtrunA17_Chr5g0417611 | 25.939 | 293 | 178 | 6 | 77 | 330 | 81 | 373 | 3.74e-20 | 91.3 |
Msa1116930 | MtrunA17_Chr1g0205671 | 26.766 | 269 | 162 | 3 | 81 | 314 | 84 | 352 | 1.19e-19 | 89.7 |
Msa1116930 | MtrunA17_Chr5g0403831 | 28.205 | 234 | 155 | 4 | 29 | 255 | 26 | 253 | 1.38e-19 | 89.4 |
Msa1116930 | MtrunA17_Chr3g0146061 | 34.000 | 200 | 116 | 6 | 68 | 255 | 32 | 227 | 2.21e-19 | 89.4 |
Msa1116930 | MtrunA17_Chr5g0407441 | 31.915 | 188 | 116 | 5 | 68 | 245 | 32 | 217 | 3.25e-19 | 88.6 |
Msa1116930 | MtrunA17_Chr8g0390521 | 22.287 | 341 | 213 | 6 | 21 | 315 | 5 | 339 | 3.61e-19 | 88.2 |
Msa1116930 | MtrunA17_Chr6g0486681 | 27.273 | 275 | 155 | 8 | 80 | 314 | 86 | 355 | 8.85e-19 | 87.0 |
Msa1116930 | MtrunA17_Chr6g0486671 | 27.273 | 275 | 155 | 8 | 80 | 314 | 86 | 355 | 8.85e-19 | 87.0 |
Msa1116930 | MtrunA17_Chr3g0128171 | 25.818 | 275 | 165 | 5 | 77 | 314 | 33 | 305 | 1.49e-18 | 86.3 |
Msa1116930 | MtrunA17_Chr3g0128081 | 26.007 | 273 | 167 | 5 | 77 | 314 | 80 | 352 | 2.79e-18 | 85.5 |
Msa1116930 | MtrunA17_Chr4g0036021 | 22.981 | 322 | 184 | 6 | 52 | 317 | 43 | 356 | 3.14e-18 | 85.5 |
Msa1116930 | MtrunA17_Chr8g0390261 | 27.037 | 270 | 162 | 6 | 80 | 314 | 86 | 355 | 6.50e-18 | 84.3 |
Msa1116930 | MtrunA17_Chr3g0078791 | 24.815 | 270 | 154 | 5 | 77 | 314 | 25 | 277 | 9.76e-17 | 80.9 |
Msa1116930 | MtrunA17_Chr8g0390141 | 27.778 | 270 | 160 | 6 | 80 | 314 | 86 | 355 | 1.06e-16 | 80.9 |
Msa1116930 | MtrunA17_Chr4g0065324 | 26.022 | 269 | 165 | 5 | 80 | 314 | 88 | 356 | 2.54e-16 | 79.7 |
Msa1116930 | MtrunA17_Chr2g0290161 | 27.273 | 275 | 136 | 8 | 98 | 334 | 21 | 269 | 1.53e-15 | 77.4 |
Msa1116930 | MtrunA17_Chr4g0065311 | 26.966 | 267 | 161 | 7 | 82 | 314 | 82 | 348 | 2.10e-15 | 77.0 |
Msa1116930 | MtrunA17_Chr8g0370141 | 29.843 | 191 | 116 | 6 | 68 | 245 | 32 | 217 | 2.93e-15 | 75.9 |
Msa1116930 | MtrunA17_Chr4g0048411 | 25.098 | 255 | 146 | 6 | 100 | 314 | 103 | 352 | 1.12e-14 | 74.7 |
Msa1116930 | MtrunA17_Chr7g0273261 | 43.836 | 73 | 41 | 0 | 244 | 316 | 37 | 109 | 2.21e-14 | 72.0 |
Msa1116930 | MtrunA17_Chr4g0048051 | 26.016 | 246 | 145 | 5 | 105 | 314 | 108 | 352 | 5.28e-14 | 72.8 |
Msa1116930 | MtrunA17_Chr5g0434231 | 28.659 | 164 | 97 | 3 | 84 | 246 | 9 | 153 | 3.92e-13 | 66.2 |
Msa1116930 | MtrunA17_Chr1g0173341 | 86.486 | 37 | 5 | 0 | 280 | 316 | 67 | 103 | 2.15e-12 | 63.5 |
Msa1116930 | MtrunA17_Chr7g0257631 | 23.616 | 271 | 165 | 5 | 82 | 314 | 122 | 388 | 2.70e-12 | 67.4 |
Msa1116930 | MtrunA17_Chr3g0078971 | 23.549 | 293 | 185 | 7 | 60 | 314 | 62 | 353 | 2.67e-11 | 64.3 |
Msa1116930 | MtrunA17_Chr5g0445601 | 23.616 | 271 | 165 | 5 | 82 | 314 | 88 | 354 | 4.32e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1116930 | AT2G48020.3 | 60.542 | 332 | 99 | 2 | 12 | 316 | 5 | 331 | 8.71e-140 | 400 |
Msa1116930 | AT2G48020.4 | 60.241 | 332 | 100 | 2 | 12 | 316 | 5 | 331 | 4.05e-139 | 399 |
Msa1116930 | AT2G48020.2 | 60.241 | 332 | 100 | 2 | 12 | 316 | 5 | 331 | 2.35e-137 | 398 |
Msa1116930 | AT2G48020.1 | 60.241 | 332 | 100 | 2 | 12 | 316 | 5 | 331 | 2.35e-137 | 398 |
Msa1116930 | AT5G18840.1 | 51.156 | 346 | 136 | 5 | 2 | 316 | 5 | 348 | 2.97e-112 | 335 |
Msa1116930 | AT3G05150.1 | 50.147 | 341 | 136 | 4 | 4 | 316 | 5 | 339 | 7.45e-107 | 320 |
Msa1116930 | AT3G05150.3 | 50.147 | 341 | 136 | 4 | 4 | 316 | 5 | 339 | 7.45e-107 | 320 |
Msa1116930 | AT3G05150.2 | 50.147 | 341 | 136 | 4 | 4 | 316 | 5 | 339 | 1.22e-106 | 320 |
Msa1116930 | AT1G54730.11 | 50.167 | 299 | 122 | 1 | 45 | 316 | 37 | 335 | 5.85e-97 | 291 |
Msa1116930 | AT1G54730.9 | 49.833 | 299 | 123 | 1 | 45 | 316 | 37 | 335 | 4.70e-96 | 291 |
Msa1116930 | AT1G54730.7 | 49.833 | 299 | 123 | 1 | 45 | 316 | 37 | 335 | 4.70e-96 | 291 |
Msa1116930 | AT1G54730.3 | 49.833 | 299 | 123 | 1 | 45 | 316 | 37 | 335 | 3.13e-95 | 290 |
Msa1116930 | AT1G54730.2 | 49.833 | 299 | 123 | 1 | 45 | 316 | 37 | 335 | 6.32e-95 | 290 |
Msa1116930 | AT1G54730.8 | 50.534 | 281 | 112 | 1 | 45 | 298 | 37 | 317 | 8.18e-90 | 274 |
Msa1116930 | AT1G54730.10 | 50.181 | 277 | 111 | 1 | 45 | 294 | 37 | 313 | 4.86e-89 | 270 |
Msa1116930 | AT1G54730.6 | 50.181 | 277 | 111 | 1 | 45 | 294 | 37 | 313 | 4.86e-89 | 270 |
Msa1116930 | AT1G54730.4 | 50.534 | 281 | 112 | 1 | 45 | 298 | 37 | 317 | 5.54e-89 | 273 |
Msa1116930 | AT1G54730.5 | 50.534 | 281 | 112 | 1 | 45 | 298 | 37 | 317 | 1.10e-88 | 273 |
Msa1116930 | AT1G08920.2 | 43.027 | 337 | 161 | 2 | 7 | 316 | 3 | 335 | 1.91e-86 | 268 |
Msa1116930 | AT1G08920.3 | 42.730 | 337 | 162 | 2 | 7 | 316 | 3 | 335 | 7.35e-86 | 266 |
Msa1116930 | AT1G08920.1 | 42.730 | 337 | 162 | 2 | 7 | 316 | 3 | 335 | 2.13e-85 | 265 |
Msa1116930 | AT3G05155.2 | 39.577 | 331 | 170 | 2 | 9 | 315 | 2 | 326 | 1.33e-81 | 251 |
Msa1116930 | AT1G19450.1 | 39.031 | 351 | 174 | 5 | 4 | 316 | 5 | 353 | 2.53e-80 | 253 |
Msa1116930 | AT1G08930.1 | 43.750 | 304 | 144 | 1 | 40 | 316 | 58 | 361 | 7.65e-80 | 252 |
Msa1116930 | AT1G08930.2 | 43.750 | 304 | 144 | 1 | 40 | 316 | 58 | 361 | 7.65e-80 | 252 |
Msa1116930 | AT3G05400.1 | 41.791 | 335 | 161 | 3 | 9 | 316 | 2 | 329 | 1.01e-79 | 250 |
Msa1116930 | AT3G05155.1 | 39.157 | 332 | 172 | 2 | 9 | 316 | 2 | 327 | 4.63e-79 | 249 |
Msa1116930 | AT3G05165.4 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 8.07e-79 | 248 |
Msa1116930 | AT3G05165.5 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 8.07e-79 | 248 |
Msa1116930 | AT3G05165.3 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 1.84e-78 | 247 |
Msa1116930 | AT3G05165.2 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 1.84e-78 | 247 |
Msa1116930 | AT3G05165.1 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 1.84e-78 | 247 |
Msa1116930 | AT3G05165.6 | 39.701 | 335 | 170 | 3 | 9 | 316 | 4 | 333 | 2.35e-78 | 248 |
Msa1116930 | AT3G20460.1 | 40.058 | 342 | 167 | 3 | 1 | 315 | 25 | 355 | 8.01e-78 | 246 |
Msa1116930 | AT1G75220.1 | 38.028 | 355 | 178 | 6 | 1 | 316 | 1 | 352 | 1.36e-77 | 246 |
Msa1116930 | AT5G27350.1 | 39.823 | 339 | 168 | 3 | 7 | 316 | 3 | 334 | 3.64e-77 | 244 |
Msa1116930 | AT3G05160.1 | 40.122 | 329 | 165 | 3 | 15 | 316 | 1 | 324 | 3.68e-77 | 244 |
Msa1116930 | AT5G27360.4 | 38.671 | 331 | 174 | 2 | 16 | 317 | 9 | 339 | 1.98e-72 | 231 |
Msa1116930 | AT5G27360.1 | 38.554 | 332 | 175 | 2 | 16 | 318 | 9 | 340 | 6.71e-72 | 231 |
Msa1116930 | AT5G27360.3 | 38.554 | 332 | 175 | 2 | 16 | 318 | 57 | 388 | 1.68e-71 | 231 |
Msa1116930 | AT3G05400.2 | 39.701 | 335 | 148 | 4 | 9 | 316 | 2 | 309 | 4.80e-70 | 225 |
Msa1116930 | AT4G04750.1 | 39.130 | 322 | 165 | 2 | 22 | 314 | 20 | 339 | 1.37e-68 | 222 |
Msa1116930 | AT4G04750.2 | 39.130 | 322 | 165 | 2 | 22 | 314 | 20 | 339 | 1.37e-68 | 222 |
Msa1116930 | AT4G04750.3 | 40.717 | 307 | 151 | 2 | 37 | 314 | 79 | 383 | 4.05e-68 | 222 |
Msa1116930 | AT4G04760.1 | 40.000 | 310 | 154 | 2 | 37 | 316 | 30 | 337 | 7.38e-67 | 218 |
Msa1116930 | AT3G05160.3 | 41.241 | 274 | 134 | 1 | 70 | 316 | 2 | 275 | 3.33e-65 | 211 |
Msa1116930 | AT3G05160.2 | 41.241 | 274 | 134 | 1 | 70 | 316 | 2 | 275 | 3.33e-65 | 211 |
Msa1116930 | AT1G08900.4 | 38.487 | 304 | 160 | 1 | 40 | 316 | 25 | 328 | 1.08e-64 | 211 |
Msa1116930 | AT4G04760.2 | 39.735 | 302 | 150 | 2 | 37 | 308 | 30 | 329 | 1.50e-64 | 211 |
Msa1116930 | AT1G08900.1 | 38.487 | 304 | 160 | 1 | 40 | 316 | 25 | 328 | 2.75e-64 | 211 |
Msa1116930 | AT1G08900.2 | 38.487 | 304 | 160 | 1 | 40 | 316 | 25 | 328 | 2.75e-64 | 211 |
Msa1116930 | AT1G08890.1 | 36.716 | 335 | 178 | 4 | 7 | 314 | 1 | 328 | 2.21e-62 | 206 |
Msa1116930 | AT1G08900.5 | 39.085 | 284 | 146 | 1 | 60 | 316 | 3 | 286 | 1.41e-60 | 200 |
Msa1116930 | AT4G04760.3 | 40.072 | 277 | 136 | 1 | 70 | 316 | 2 | 278 | 8.05e-58 | 192 |
Msa1116930 | AT1G08900.3 | 36.513 | 304 | 158 | 2 | 40 | 316 | 25 | 320 | 4.88e-57 | 191 |
Msa1116930 | AT5G27360.2 | 37.288 | 236 | 121 | 1 | 110 | 318 | 1 | 236 | 1.36e-46 | 162 |
Msa1116930 | AT5G27360.5 | 37.288 | 236 | 121 | 1 | 110 | 318 | 1 | 236 | 1.36e-46 | 162 |
Msa1116930 | AT5G16150.2 | 31.046 | 306 | 176 | 6 | 46 | 317 | 111 | 415 | 4.46e-35 | 134 |
Msa1116930 | AT5G16150.1 | 31.046 | 306 | 176 | 6 | 46 | 317 | 111 | 415 | 4.46e-35 | 134 |
Msa1116930 | AT5G16150.3 | 31.046 | 306 | 176 | 6 | 46 | 317 | 111 | 415 | 4.46e-35 | 134 |
Msa1116930 | AT5G17010.1 | 30.025 | 393 | 198 | 15 | 8 | 332 | 17 | 400 | 1.49e-28 | 115 |
Msa1116930 | AT5G17010.3 | 30.025 | 393 | 198 | 15 | 8 | 332 | 17 | 400 | 1.49e-28 | 115 |
Msa1116930 | AT5G17010.4 | 30.025 | 393 | 198 | 15 | 8 | 332 | 17 | 400 | 1.49e-28 | 115 |
Msa1116930 | AT1G79820.2 | 30.795 | 302 | 177 | 4 | 45 | 314 | 59 | 360 | 2.80e-28 | 114 |
Msa1116930 | AT1G79820.1 | 30.795 | 302 | 177 | 4 | 45 | 314 | 59 | 360 | 2.80e-28 | 114 |
Msa1116930 | AT1G79820.4 | 30.795 | 302 | 177 | 4 | 45 | 314 | 59 | 360 | 2.84e-28 | 114 |
Msa1116930 | AT1G67300.6 | 29.276 | 304 | 181 | 5 | 45 | 314 | 56 | 359 | 4.57e-28 | 114 |
Msa1116930 | AT1G67300.7 | 29.276 | 304 | 181 | 5 | 45 | 314 | 56 | 359 | 4.57e-28 | 114 |
Msa1116930 | AT1G67300.4 | 29.276 | 304 | 181 | 5 | 45 | 314 | 56 | 359 | 4.88e-28 | 113 |
Msa1116930 | AT1G67300.5 | 29.276 | 304 | 181 | 5 | 45 | 314 | 56 | 359 | 4.88e-28 | 113 |
Msa1116930 | AT1G67300.2 | 29.373 | 303 | 180 | 5 | 46 | 314 | 57 | 359 | 6.33e-28 | 114 |
Msa1116930 | AT1G67300.1 | 29.373 | 303 | 180 | 5 | 46 | 314 | 57 | 359 | 7.06e-28 | 113 |
Msa1116930 | AT1G67300.3 | 29.373 | 303 | 180 | 5 | 46 | 314 | 57 | 359 | 7.06e-28 | 113 |
Msa1116930 | AT1G20840.2 | 35.106 | 188 | 108 | 4 | 68 | 245 | 32 | 215 | 1.04e-25 | 108 |
Msa1116930 | AT1G20840.1 | 35.106 | 188 | 108 | 4 | 68 | 245 | 32 | 215 | 1.04e-25 | 108 |
Msa1116930 | AT1G05030.1 | 30.065 | 306 | 174 | 6 | 46 | 314 | 85 | 387 | 3.52e-25 | 106 |
Msa1116930 | AT1G05030.2 | 30.682 | 264 | 149 | 4 | 84 | 314 | 73 | 335 | 4.40e-25 | 105 |
Msa1116930 | AT5G59250.1 | 29.874 | 318 | 166 | 10 | 52 | 314 | 114 | 429 | 8.64e-25 | 105 |
Msa1116930 | AT3G05960.1 | 31.095 | 283 | 154 | 7 | 80 | 323 | 80 | 360 | 1.46e-24 | 104 |
Msa1116930 | AT3G03090.1 | 26.902 | 368 | 215 | 10 | 2 | 318 | 15 | 379 | 2.73e-24 | 103 |
Msa1116930 | AT1G30220.1 | 28.627 | 255 | 140 | 5 | 104 | 317 | 95 | 348 | 3.40e-24 | 103 |
Msa1116930 | AT2G16120.1 | 24.375 | 320 | 184 | 5 | 52 | 317 | 42 | 357 | 3.81e-24 | 103 |
Msa1116930 | AT2G20780.1 | 23.810 | 336 | 215 | 3 | 22 | 316 | 37 | 372 | 5.26e-24 | 102 |
Msa1116930 | AT3G51490.2 | 35.000 | 200 | 114 | 6 | 68 | 255 | 32 | 227 | 1.04e-23 | 102 |
Msa1116930 | AT3G51490.1 | 35.000 | 200 | 114 | 6 | 68 | 255 | 32 | 227 | 1.08e-23 | 102 |
Msa1116930 | AT3G51490.3 | 37.288 | 177 | 97 | 5 | 89 | 255 | 5 | 177 | 1.16e-23 | 102 |
Msa1116930 | AT5G26250.1 | 29.932 | 294 | 165 | 7 | 80 | 334 | 81 | 372 | 3.15e-23 | 100 |
Msa1116930 | AT2G20780.2 | 24.567 | 289 | 177 | 3 | 69 | 316 | 26 | 314 | 9.88e-23 | 99.0 |
Msa1116930 | AT2G16130.1 | 24.688 | 320 | 183 | 6 | 52 | 317 | 42 | 357 | 1.02e-22 | 99.0 |
Msa1116930 | AT3G18830.1 | 22.812 | 320 | 189 | 4 | 52 | 317 | 52 | 367 | 1.45e-22 | 98.6 |
Msa1116930 | AT2G35740.1 | 25.271 | 277 | 164 | 4 | 84 | 317 | 73 | 349 | 1.65e-22 | 98.6 |
Msa1116930 | AT2G43330.1 | 31.390 | 223 | 108 | 5 | 136 | 317 | 130 | 348 | 2.77e-22 | 97.8 |
Msa1116930 | AT4G35300.9 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.10e-22 | 97.4 |
Msa1116930 | AT4G35300.2 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.10e-22 | 97.4 |
Msa1116930 | AT4G35300.3 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.10e-22 | 97.4 |
Msa1116930 | AT4G35300.4 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.8 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.6 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.11 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.1 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.10 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT4G35300.7 | 35.437 | 206 | 105 | 7 | 68 | 255 | 32 | 227 | 6.49e-22 | 97.1 |
Msa1116930 | AT2G18480.1 | 29.208 | 202 | 132 | 3 | 54 | 248 | 36 | 233 | 7.68e-22 | 96.7 |
Msa1116930 | AT3G19930.1 | 27.037 | 270 | 162 | 5 | 80 | 314 | 82 | 351 | 9.03e-22 | 96.3 |
Msa1116930 | AT3G19930.2 | 27.037 | 270 | 162 | 5 | 80 | 314 | 82 | 351 | 9.03e-22 | 96.3 |
Msa1116930 | AT5G23270.1 | 27.737 | 274 | 161 | 5 | 77 | 314 | 82 | 354 | 4.61e-20 | 91.3 |
Msa1116930 | AT4G36670.1 | 28.230 | 209 | 143 | 1 | 54 | 255 | 31 | 239 | 2.65e-19 | 89.0 |
Msa1116930 | AT3G19940.1 | 27.037 | 270 | 161 | 5 | 80 | 314 | 85 | 353 | 2.91e-19 | 89.0 |
Msa1116930 | AT1G07340.1 | 27.037 | 270 | 161 | 5 | 80 | 314 | 82 | 350 | 3.55e-19 | 88.6 |
Msa1116930 | AT1G50310.1 | 27.037 | 270 | 162 | 5 | 80 | 314 | 85 | 354 | 3.63e-19 | 88.6 |
Msa1116930 | AT4G16480.2 | 26.054 | 261 | 150 | 5 | 100 | 317 | 90 | 350 | 5.24e-19 | 88.2 |
Msa1116930 | AT4G16480.3 | 26.054 | 261 | 150 | 5 | 100 | 317 | 90 | 350 | 5.24e-19 | 88.2 |
Msa1116930 | AT4G16480.1 | 26.054 | 261 | 150 | 5 | 100 | 317 | 90 | 350 | 5.24e-19 | 88.2 |
Msa1116930 | AT5G17010.2 | 27.811 | 338 | 197 | 13 | 8 | 314 | 18 | 339 | 1.28e-18 | 86.7 |
Msa1116930 | AT1G11260.1 | 25.461 | 271 | 165 | 4 | 80 | 314 | 83 | 352 | 1.51e-18 | 86.7 |
Msa1116930 | AT5G26340.1 | 27.509 | 269 | 160 | 5 | 81 | 314 | 85 | 353 | 2.82e-17 | 83.2 |
Msa1116930 | AT1G79820.3 | 29.956 | 227 | 135 | 3 | 45 | 247 | 59 | 285 | 2.72e-16 | 79.7 |
Msa1116930 | AT1G54730.1 | 58.065 | 62 | 26 | 0 | 91 | 152 | 1 | 62 | 4.25e-16 | 72.4 |
Msa1116930 | AT4G21480.1 | 26.236 | 263 | 154 | 5 | 80 | 308 | 83 | 339 | 1.22e-15 | 78.2 |
Msa1116930 | AT1G77210.2 | 24.603 | 252 | 150 | 5 | 69 | 280 | 67 | 318 | 1.66e-14 | 74.7 |
Msa1116930 | AT1G77210.1 | 24.603 | 252 | 150 | 5 | 69 | 280 | 67 | 318 | 1.66e-14 | 74.7 |
Msa1116930 | AT5G61520.2 | 25.939 | 293 | 175 | 6 | 65 | 315 | 18 | 310 | 4.99e-14 | 73.2 |
Msa1116930 | AT5G61520.1 | 25.939 | 293 | 175 | 6 | 65 | 315 | 66 | 358 | 6.07e-14 | 72.8 |
Msa1116930 | AT4G02050.2 | 24.345 | 267 | 168 | 5 | 82 | 314 | 88 | 354 | 2.13e-13 | 71.2 |
Msa1116930 | AT4G02050.1 | 24.345 | 267 | 168 | 5 | 82 | 314 | 88 | 354 | 2.13e-13 | 71.2 |
Msa1116930 | AT1G50310.2 | 26.263 | 198 | 111 | 5 | 152 | 314 | 14 | 211 | 9.95e-12 | 65.9 |
Msa1116930 | AT1G34580.2 | 25.092 | 271 | 165 | 4 | 82 | 314 | 35 | 305 | 2.16e-11 | 65.1 |
Msa1116930 | AT1G34580.1 | 25.092 | 271 | 165 | 4 | 82 | 314 | 85 | 355 | 2.42e-11 | 65.1 |
Find 95 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCACTGCTGTGTTGCTTT+TGG | 0.193309 | 7_3:-64987436 | Msa1116930:CDS |
GTTTGTGGCTCTTATGAATT+TGG | 0.220847 | 7_3:-64988961 | Msa1116930:CDS |
CTTATGGTCTGCCAGCAATT+AGG | 0.223058 | 7_3:-64986490 | Msa1116930:CDS |
GGTATAGTTCCTTTGGATAT+TGG | 0.232181 | 7_3:-64988020 | Msa1116930:CDS |
ATACTCTTATTGTTATTTCT+TGG | 0.242689 | 7_3:-64985977 | Msa1116930:three_prime_UTR |
TTATGGTCTGCCAGCAATTA+GGG | 0.248496 | 7_3:-64986489 | Msa1116930:CDS |
ATGATTGTTAGTGGGGCATC+TGG | 0.271485 | 7_3:-64987641 | Msa1116930:CDS |
AAGGCTCCTCTGCGTTCTTT+TGG | 0.284007 | 7_3:+64987821 | None:intergenic |
CCCCTTTCGTCCAACGAATT+CGG | 0.288600 | 7_3:+64988318 | None:intergenic |
GCAACACAGCAGTGGGAATA+AGG | 0.294518 | 7_3:+64987442 | None:intergenic |
GTATAGTTCCTTTGGATATT+GGG | 0.294997 | 7_3:-64988019 | Msa1116930:CDS |
GCATCTGGGTCATTCATAAT+TGG | 0.302073 | 7_3:-64987626 | Msa1116930:CDS |
GAGGGATCTTAATCTGTCTT+TGG | 0.321513 | 7_3:-64988807 | Msa1116930:CDS |
TTTGGCTCCATCTTGACTTT+CGG | 0.336465 | 7_3:-64988376 | Msa1116930:CDS |
CTCCAGCTCAAGATGCTATC+AGG | 0.340944 | 7_3:-64988829 | Msa1116930:CDS |
ACCACATTCATTGCAGTTTG+TGG | 0.341420 | 7_3:-64988976 | Msa1116930:CDS |
AGGCTGGAAGCCCCTACTTT+TGG | 0.349288 | 7_3:-64986061 | Msa1116930:CDS |
GTTATTTCTTGGTTTCGATT+AGG | 0.361408 | 7_3:-64985966 | Msa1116930:three_prime_UTR |
TAATTGGAACAGTACTTTCA+TGG | 0.363139 | 7_3:-64987610 | Msa1116930:CDS |
TATATAGGGTATAGTTCCTT+TGG | 0.363412 | 7_3:-64988027 | Msa1116930:intron |
TAAGATTGGGGTAGGGCTTA+TGG | 0.365737 | 7_3:-64986506 | Msa1116930:intron |
CGTCCAACGAATTCGGCAAT+AGG | 0.365935 | 7_3:+64988325 | None:intergenic |
TCAAGAAGCAGAAGAAATTC+AGG | 0.367241 | 7_3:-64987218 | Msa1116930:intron |
GCCGAATTCGTTGGACGAAA+GGG | 0.368904 | 7_3:-64988319 | Msa1116930:CDS |
GGAATGAGAGAAACATTGAT+AGG | 0.384626 | 7_3:-64989063 | Msa1116930:CDS |
GCAATTTCTGCTACGAAGAT+AGG | 0.388745 | 7_3:+64987845 | None:intergenic |
TATAATATACGCTATCCTTC+AGG | 0.395137 | 7_3:-64986214 | Msa1116930:intron |
TTGACTTTCGGTGCGATGAT+TGG | 0.401877 | 7_3:-64988364 | Msa1116930:CDS |
GGGAGACTACTAACAGGATA+TGG | 0.407463 | 7_3:-64987999 | Msa1116930:CDS |
TTGTAGTTCATGATTGTTAG+TGG | 0.407861 | 7_3:-64987650 | Msa1116930:intron |
TTATTACTTACCAGCCATCT+AGG | 0.415487 | 7_3:+64987390 | None:intergenic |
AATGGAAATCAAAGACGAAA+TGG | 0.419428 | 7_3:-64989103 | Msa1116930:CDS |
ATGGAGGAAGGTAAGCATAA+TGG | 0.421437 | 7_3:-64989084 | Msa1116930:CDS |
TGGAGGGCTTTAGCTATAAT+CGG | 0.425528 | 7_3:-64987590 | Msa1116930:intron |
TCATTCCCGAGTCTCCTAGA+TGG | 0.426054 | 7_3:-64987404 | Msa1116930:CDS |
ACAATGCAGTACTCCTTGTT+TGG | 0.430431 | 7_3:-64988394 | Msa1116930:intron |
CTTTAAATTTACCAAAAGTA+GGG | 0.436278 | 7_3:+64986050 | None:intergenic |
TGTAGTTCATGATTGTTAGT+GGG | 0.443961 | 7_3:-64987649 | Msa1116930:intron |
TCAAGCGCTTTCAGTATTGC+AGG | 0.456013 | 7_3:-64988169 | Msa1116930:CDS |
CCGAATTCGTTGGACGAAAG+GGG | 0.457884 | 7_3:-64988318 | Msa1116930:CDS |
GCTTTAAATTTACCAAAAGT+AGG | 0.457971 | 7_3:+64986049 | None:intergenic |
TGCCGAATTCGTTGGACGAA+AGG | 0.459597 | 7_3:-64988320 | Msa1116930:CDS |
TCCAGCCTGCTCTATCTATG+AGG | 0.461507 | 7_3:+64986076 | None:intergenic |
GATATTGGGAGACTACTAAC+AGG | 0.466512 | 7_3:-64988005 | Msa1116930:CDS |
GTAGGATTTCCTTCTGCGAT+GGG | 0.477559 | 7_3:-64986240 | Msa1116930:intron |
GGACCTATTGCCGAATTCGT+TGG | 0.478055 | 7_3:-64988328 | Msa1116930:CDS |
TCTTAATCTGTCTTTGGAAG+AGG | 0.482614 | 7_3:-64988801 | Msa1116930:intron |
GAATGAGAGAAACATTGATA+GGG | 0.483468 | 7_3:-64989062 | Msa1116930:CDS |
TAAGAGTATCATACATGAAG+TGG | 0.510384 | 7_3:+64985991 | None:intergenic |
TCCCGAGTCTCCTAGATGGC+TGG | 0.521040 | 7_3:-64987400 | Msa1116930:intron |
CTACTAACAGGATATGGAAT+GGG | 0.523406 | 7_3:-64987993 | Msa1116930:CDS |
CAGATTGTGATCACAGGTGT+TGG | 0.523824 | 7_3:-64986105 | Msa1116930:CDS |
GGTAGGATTTCCTTCTGCGA+TGG | 0.524769 | 7_3:-64986241 | Msa1116930:intron |
GTAGTTCATGATTGTTAGTG+GGG | 0.526444 | 7_3:-64987648 | Msa1116930:intron |
ACAAAGATCATCATTATCCA+TGG | 0.531059 | 7_3:-64989011 | Msa1116930:CDS |
ATTCATGATAAGATTGGGGT+AGG | 0.531448 | 7_3:-64986514 | Msa1116930:intron |
TGGAACAGTACTTTCATGGA+GGG | 0.532101 | 7_3:-64987606 | Msa1116930:CDS |
GTGGTGAAATAAAGCATCCA+TGG | 0.532679 | 7_3:+64988994 | None:intergenic |
TGATTGTTAGTGGGGCATCT+GGG | 0.534637 | 7_3:-64987640 | Msa1116930:CDS |
CTTTGTTTGCATGAACAAGT+TGG | 0.543321 | 7_3:+64989028 | None:intergenic |
TTTAAATTTACCAAAAGTAG+GGG | 0.548748 | 7_3:+64986051 | None:intergenic |
CATCGCACCGAAAGTCAAGA+TGG | 0.552889 | 7_3:+64988369 | None:intergenic |
CCAGCCTGCTCTATCTATGA+GGG | 0.553786 | 7_3:+64986077 | None:intergenic |
TACCAGCCATCTAGGAGACT+CGG | 0.554524 | 7_3:+64987398 | None:intergenic |
CGAATTCGTTGGACGAAAGG+GGG | 0.558292 | 7_3:-64988317 | Msa1116930:intron |
TTCATGATAAGATTGGGGTA+GGG | 0.562152 | 7_3:-64986513 | Msa1116930:intron |
GAAGCATTGCAAATACTTCG+TGG | 0.564471 | 7_3:-64987259 | Msa1116930:CDS |
CTCCTGATAGCATCTTGAGC+TGG | 0.565448 | 7_3:+64988827 | None:intergenic |
ACCCAAAAGCAACACAGCAG+TGG | 0.569549 | 7_3:+64987434 | None:intergenic |
ATTATACTCCCCATCGCAGA+AGG | 0.571080 | 7_3:+64986231 | None:intergenic |
CCCAAAAGCAACACAGCAGT+GGG | 0.571533 | 7_3:+64987435 | None:intergenic |
CCCTCATAGATAGAGCAGGC+TGG | 0.575051 | 7_3:-64986077 | Msa1116930:CDS |
ACCAGCCATCTAGGAGACTC+GGG | 0.581675 | 7_3:+64987399 | None:intergenic |
ACTACTAACAGGATATGGAA+TGG | 0.582100 | 7_3:-64987994 | Msa1116930:CDS |
ATCAAAGACGAAATGGAGGA+AGG | 0.591811 | 7_3:-64989096 | Msa1116930:CDS |
GCAGCCCTCATAGATAGAGC+AGG | 0.591826 | 7_3:-64986081 | Msa1116930:CDS |
TACCTGGTTTAAGGTAGTCA+AGG | 0.596293 | 7_3:+64987802 | None:intergenic |
TAATGACTGCAGGCAAAGAG+AGG | 0.605948 | 7_3:-64987301 | Msa1116930:intron |
CAAGCGCTTTCAGTATTGCA+GGG | 0.609346 | 7_3:-64988168 | Msa1116930:CDS |
AGGACGCGCAAAAGATTCTG+TGG | 0.617669 | 7_3:-64987281 | Msa1116930:CDS |
AGTCAAGATGGAGCCAAACA+AGG | 0.620309 | 7_3:+64988381 | None:intergenic |
GGAAATCAAAGACGAAATGG+AGG | 0.629598 | 7_3:-64989100 | Msa1116930:CDS |
TATGGTCTGCCAGCAATTAG+GGG | 0.632288 | 7_3:-64986488 | Msa1116930:CDS |
AATGAGAGAAACATTGATAG+GGG | 0.634911 | 7_3:-64989061 | Msa1116930:CDS |
AGCTCAAGATGCTATCAGGA+GGG | 0.635588 | 7_3:-64988825 | Msa1116930:CDS |
AGTAGTCTCCCAATATCCAA+AGG | 0.640639 | 7_3:+64988011 | None:intergenic |
AGCCTTGACTACCTTAAACC+AGG | 0.641981 | 7_3:-64987804 | Msa1116930:intron |
ATGGTCTGCCAGCAATTAGG+GGG | 0.646014 | 7_3:-64986487 | Msa1116930:CDS |
CAGCTCAAGATGCTATCAGG+AGG | 0.648596 | 7_3:-64988826 | Msa1116930:CDS |
TAGGATTTCCTTCTGCGATG+GGG | 0.649900 | 7_3:-64986239 | Msa1116930:CDS |
TTGGAACAGTACTTTCATGG+AGG | 0.660408 | 7_3:-64987607 | Msa1116930:CDS |
GCCACAAACTGCAATGAATG+TGG | 0.669272 | 7_3:+64988975 | None:intergenic |
ATGATTGGTGCAATAACAAG+TGG | 0.674569 | 7_3:-64988349 | Msa1116930:CDS |
GCGCTTTCAGTATTGCAGGG+TGG | 0.686186 | 7_3:-64988165 | Msa1116930:CDS |
ATTGCGCCAAAAGAACGCAG+AGG | 0.739667 | 7_3:-64987827 | Msa1116930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGAAATAATTAAACATT+TGG | + | chr7_3:64986798-64986817 | None:intergenic | 10.0% |
!!! | AATGTTTAATTATTTCTTTT+TGG | - | chr7_3:64986798-64986817 | Msa1116930:intron | 10.0% |
!!! | TTTTAAAACATGATTTAATT+TGG | + | chr7_3:64988723-64988742 | None:intergenic | 10.0% |
!! | TGATGAATTAAAAATTGTTT+AGG | + | chr7_3:64986357-64986376 | None:intergenic | 15.0% |
!! | AAGAAAATTACATTAAATCA+AGG | + | chr7_3:64986609-64986628 | None:intergenic | 15.0% |
!! | TATAAGAGGTAAAAAAAAAA+AGG | + | chr7_3:64986999-64987018 | None:intergenic | 15.0% |
!! | TTTACCTCTTATATATATAT+AGG | - | chr7_3:64987006-64987025 | Msa1116930:intron | 15.0% |
!! | TTACCTCTTATATATATATA+GGG | - | chr7_3:64987007-64987026 | Msa1116930:intron | 15.0% |
!! | ACCTTACATTTATATATATA+AGG | - | chr7_3:64987178-64987197 | Msa1116930:intron | 15.0% |
!! | ACCTTATATATATAAATGTA+AGG | + | chr7_3:64987182-64987201 | None:intergenic | 15.0% |
!!! | AAATTATCCTTATTTACTAT+TGG | + | chr7_3:64988151-64988170 | None:intergenic | 15.0% |
!! | AATAGTAAATAAGGATAATT+TGG | - | chr7_3:64988150-64988169 | Msa1116930:CDS | 15.0% |
!!! | ACAAATATGAAAATTTTGAT+TGG | + | chr7_3:64988455-64988474 | None:intergenic | 15.0% |
!!! | TTTATTTTGTTTTGGTTTAT+TGG | - | chr7_3:64988773-64988792 | Msa1116930:intron | 15.0% |
!! | TTAAATTAACCAATAATTCT+TGG | - | chr7_3:64988866-64988885 | Msa1116930:intron | 15.0% |
!!! | ATTAAATTTTCAATAGCTAC+TGG | + | chr7_3:64986277-64986296 | None:intergenic | 20.0% |
!! | AATTTAATTACATAACCCTT+TGG | - | chr7_3:64986294-64986313 | Msa1116930:intron | 20.0% |
!! | TAATTTCAGGAAAATTATGA+TGG | - | chr7_3:64986754-64986773 | Msa1116930:intron | 20.0% |
!!! | GTTTAATTATTTCTTTTTGG+AGG | - | chr7_3:64986801-64986820 | Msa1116930:intron | 20.0% |
!! | ATTCAAGGTAAATAAAAAGT+TGG | - | chr7_3:64986825-64986844 | Msa1116930:intron | 20.0% |
!! | ATACCCTATATATATATAAG+AGG | + | chr7_3:64987013-64987032 | None:intergenic | 20.0% |
!! | AATCATTTCATTGAAAAACT+AGG | + | chr7_3:64987109-64987128 | None:intergenic | 20.0% |
!! | AAGTTATCAACTTATTATCA+TGG | + | chr7_3:64987301-64987320 | None:intergenic | 20.0% |
!! | ATCTAAATCAATATGCAATA+AGG | - | chr7_3:64987331-64987350 | Msa1116930:intron | 20.0% |
!!! | AAATTTATATTTTCTCCGTA+TGG | + | chr7_3:64987528-64987547 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_3:64988064-64988083 | None:intergenic | 20.0% |
!!! | TGGTTTTAAAAGTAATACAT+TGG | + | chr7_3:64988127-64988146 | None:intergenic | 20.0% |
!!! | ATATTAGTTCGTTTTCTTTA+AGG | - | chr7_3:64988357-64988376 | Msa1116930:CDS | 20.0% |
!!! | CTCAGATTTTTATTTTGTTT+TGG | - | chr7_3:64988765-64988784 | Msa1116930:intron | 20.0% |
!! | ATTTAAAAATAAGAACCTGA+AGG | + | chr7_3:64988852-64988871 | None:intergenic | 20.0% |
!! | ATCTGTGAAAATAAAAATCA+TGG | + | chr7_3:64988928-64988947 | None:intergenic | 20.0% |
!! | TTTAAATTTACCAAAAGTAG+GGG | + | chr7_3:64989000-64989019 | None:intergenic | 20.0% |
!! | CTTTAAATTTACCAAAAGTA+GGG | + | chr7_3:64989001-64989020 | None:intergenic | 20.0% |
!!! | ATACTCTTATTGTTATTTCT+TGG | - | chr7_3:64989071-64989090 | Msa1116930:CDS | 20.0% |
!!! | TTATTTTTGTTTTTCCAGAC+TGG | - | chr7_3:64986188-64986207 | Msa1116930:intron | 25.0% |
!! | AAAATTGTTTAGGACCAAAT+TGG | + | chr7_3:64986347-64986366 | None:intergenic | 25.0% |
! | TGCAAATTGCTTAATAAACT+AGG | + | chr7_3:64986387-64986406 | None:intergenic | 25.0% |
! | GAAAATTATGATGGTTGATT+TGG | - | chr7_3:64986763-64986782 | Msa1116930:intron | 25.0% |
! | GAGGTAAAAAAAAAAAGGTT+CGG | + | chr7_3:64986994-64987013 | None:intergenic | 25.0% |
! | ACTTAAAACGGCATTATATT+TGG | + | chr7_3:64987931-64987950 | None:intergenic | 25.0% |
!!! | AATATAATGCCGTTTTAAGT+TGG | - | chr7_3:64987931-64987950 | Msa1116930:intron | 25.0% |
! | AAAGATACACCAACTTAAAA+CGG | + | chr7_3:64987943-64987962 | None:intergenic | 25.0% |
! | AAACCAACCAATAGTAAATA+AGG | - | chr7_3:64988141-64988160 | Msa1116930:intron | 25.0% |
!! | TATCCTTATTTACTATTGGT+TGG | + | chr7_3:64988147-64988166 | None:intergenic | 25.0% |
! | AATGATTAAGAAAAAGAGAG+TGG | + | chr7_3:64988184-64988203 | None:intergenic | 25.0% |
! | AAACGAACTAATATCAAAAG+TGG | + | chr7_3:64988351-64988370 | None:intergenic | 25.0% |
! | CTTAATACAACAATATGAGA+AGG | + | chr7_3:64988415-64988434 | None:intergenic | 25.0% |
! | TGATCTATTCATGATAAGAT+TGG | - | chr7_3:64988528-64988547 | Msa1116930:intron | 25.0% |
! | GATCTATTCATGATAAGATT+GGG | - | chr7_3:64988529-64988548 | Msa1116930:intron | 25.0% |
! | ATCTATTCATGATAAGATTG+GGG | - | chr7_3:64988530-64988549 | Msa1116930:intron | 25.0% |
!! | TGATATTCAAGAAAGTATGA+TGG | + | chr7_3:64988677-64988696 | None:intergenic | 25.0% |
!! | TCAGATTTTCCAAGAATTAT+TGG | + | chr7_3:64988878-64988897 | None:intergenic | 25.0% |
! | AATAAAAATCATGGTTGAGT+TGG | + | chr7_3:64988919-64988938 | None:intergenic | 25.0% |
!! | GCTTTAAATTTACCAAAAGT+AGG | + | chr7_3:64989002-64989021 | None:intergenic | 25.0% |
GAATGAGAGAAACATTGATA+GGG | - | chr7_3:64985986-64986005 | Msa1116930:exon | 30.0% | |
AATGAGAGAAACATTGATAG+GGG | - | chr7_3:64985987-64986006 | Msa1116930:exon | 30.0% | |
ACAAAGATCATCATTATCCA+TGG | - | chr7_3:64986037-64986056 | Msa1116930:CDS | 30.0% | |
TTATTCTCTGTGGTTACATT+AGG | + | chr7_3:64986320-64986339 | None:intergenic | 30.0% | |
! | AATTGGTAGTTTATTCTCTG+TGG | + | chr7_3:64986330-64986349 | None:intergenic | 30.0% |
CAGAGAATAAACTACCAATT+TGG | - | chr7_3:64986330-64986349 | Msa1116930:intron | 30.0% | |
!!! | TTTCTTTTTGGAGGTATTCA+AGG | - | chr7_3:64986810-64986829 | Msa1116930:intron | 30.0% |
!!! | GCTTGTTATTTACTTTTCTG+AGG | - | chr7_3:64986905-64986924 | Msa1116930:intron | 30.0% |
TATATAGGGTATAGTTCCTT+TGG | - | chr7_3:64987021-64987040 | Msa1116930:intron | 30.0% | |
GTATAGTTCCTTTGGATATT+GGG | - | chr7_3:64987029-64987048 | Msa1116930:intron | 30.0% | |
!!! | AATGGGAGTTTTTTCATTTG+TGG | - | chr7_3:64987072-64987091 | Msa1116930:intron | 30.0% |
CATATGCAAGTGTCTTAAAA+TGG | + | chr7_3:64987141-64987160 | None:intergenic | 30.0% | |
TTGTAGTTCATGATTGTTAG+TGG | - | chr7_3:64987398-64987417 | Msa1116930:intron | 30.0% | |
TGTAGTTCATGATTGTTAGT+GGG | - | chr7_3:64987399-64987418 | Msa1116930:intron | 30.0% | |
TAATTGGAACAGTACTTTCA+TGG | - | chr7_3:64987438-64987457 | Msa1116930:CDS | 30.0% | |
AGTAGTTATATAATCCTGTG+TGG | + | chr7_3:64987971-64987990 | None:intergenic | 30.0% | |
!!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr7_3:64988232-64988251 | None:intergenic | 30.0% |
!! | AAACGACACTCATTTTGAAA+CGG | - | chr7_3:64988233-64988252 | Msa1116930:intron | 30.0% |
AATACAACAATATGAGAAGG+TGG | + | chr7_3:64988412-64988431 | None:intergenic | 30.0% | |
! | GGTTTATTGGTGCATTTTTA+TGG | - | chr7_3:64988786-64988805 | Msa1116930:intron | 30.0% |
! | TATTGGTGCATTTTTATGGT+AGG | - | chr7_3:64988790-64988809 | Msa1116930:intron | 30.0% |
TATAATATACGCTATCCTTC+AGG | - | chr7_3:64988834-64988853 | Msa1116930:CDS | 30.0% | |
!! | TAAGAGTATCATACATGAAG+TGG | + | chr7_3:64989060-64989079 | None:intergenic | 30.0% |
!! | GTTATTTCTTGGTTTCGATT+AGG | - | chr7_3:64989082-64989101 | Msa1116930:CDS | 30.0% |
GGAATGAGAGAAACATTGAT+AGG | - | chr7_3:64985985-64986004 | Msa1116930:exon | 35.0% | |
! | CTTTGTTTGCATGAACAAGT+TGG | + | chr7_3:64986023-64986042 | None:intergenic | 35.0% |
GTTTGTGGCTCTTATGAATT+TGG | - | chr7_3:64986087-64986106 | Msa1116930:CDS | 35.0% | |
AGAGAAGTAAAGACTTACAC+AGG | + | chr7_3:64986115-64986134 | None:intergenic | 35.0% | |
! | TCTTAATCTGTCTTTGGAAG+AGG | - | chr7_3:64986247-64986266 | Msa1116930:intron | 35.0% |
! | ATTGACAGCACAACTTTTAG+TGG | - | chr7_3:64986498-64986517 | Msa1116930:CDS | 35.0% |
ATAACGTATTTGATCAGTGC+TGG | - | chr7_3:64986574-64986593 | Msa1116930:intron | 35.0% | |
ATGATTGGTGCAATAACAAG+TGG | - | chr7_3:64986699-64986718 | Msa1116930:intron | 35.0% | |
!! | TGGTTTTGCAACATATATGC+AGG | - | chr7_3:64986845-64986864 | Msa1116930:intron | 35.0% |
! | AAAAAGGTTCGGTTAATCCT+TGG | + | chr7_3:64986983-64987002 | None:intergenic | 35.0% |
GGTATAGTTCCTTTGGATAT+TGG | - | chr7_3:64987028-64987047 | Msa1116930:intron | 35.0% | |
ACTACTAACAGGATATGGAA+TGG | - | chr7_3:64987054-64987073 | Msa1116930:intron | 35.0% | |
CTACTAACAGGATATGGAAT+GGG | - | chr7_3:64987055-64987074 | Msa1116930:intron | 35.0% | |
!!! | GGAGTTTTTTCATTTGTGGT+TGG | - | chr7_3:64987076-64987095 | Msa1116930:intron | 35.0% |
GCAAAAACATACCTGGTTTA+AGG | + | chr7_3:64987258-64987277 | None:intergenic | 35.0% | |
GTAGTTCATGATTGTTAGTG+GGG | - | chr7_3:64987400-64987419 | Msa1116930:intron | 35.0% | |
TTATTACTTACCAGCCATCT+AGG | + | chr7_3:64987661-64987680 | None:intergenic | 35.0% | |
TCAAGAAGCAGAAGAAATTC+AGG | - | chr7_3:64987830-64987849 | Msa1116930:CDS | 35.0% | |
! | AGGTTAACATGTGTTATTGC+TGG | - | chr7_3:64987850-64987869 | Msa1116930:CDS | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr7_3:64987998-64988017 | None:intergenic | 35.0% |
! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_3:64988098-64988117 | None:intergenic | 35.0% |
! | GTTGTGTGCAGAGTATTAAT+TGG | + | chr7_3:64988102-64988121 | None:intergenic | 35.0% |
TGAAATAAATCCAGCCCATT+TGG | + | chr7_3:64988287-64988306 | None:intergenic | 35.0% | |
!!! | TTTTCTTTAAGGCTTGTGTG+TGG | - | chr7_3:64988368-64988387 | Msa1116930:CDS | 35.0% |
ATTCATGATAAGATTGGGGT+AGG | - | chr7_3:64988534-64988553 | Msa1116930:intron | 35.0% | |
TTCATGATAAGATTGGGGTA+GGG | - | chr7_3:64988535-64988554 | Msa1116930:intron | 35.0% | |
!! | AGCAGTATTTTTGATCTAGC+AGG | - | chr7_3:64988609-64988628 | Msa1116930:intron | 35.0% |
AAAATCTGAGTGCTTCATGA+AGG | + | chr7_3:64988755-64988774 | None:intergenic | 35.0% | |
!! | AATCATGGTTGAGTTGGATT+CGG | + | chr7_3:64988913-64988932 | None:intergenic | 35.0% |
! | TTTTCACAGATTGTGATCAC+AGG | - | chr7_3:64988937-64988956 | Msa1116930:intron | 35.0% |
GGAAATCAAAGACGAAATGG+AGG | - | chr7_3:64985948-64985967 | Msa1116930:three_prime_UTR | 40.0% | |
ATCAAAGACGAAATGGAGGA+AGG | - | chr7_3:64985952-64985971 | Msa1116930:three_prime_UTR | 40.0% | |
ATGGAGGAAGGTAAGCATAA+TGG | - | chr7_3:64985964-64985983 | Msa1116930:three_prime_UTR | 40.0% | |
! | GTGGTGAAATAAAGCATCCA+TGG | + | chr7_3:64986057-64986076 | None:intergenic | 40.0% |
ACCACATTCATTGCAGTTTG+TGG | - | chr7_3:64986072-64986091 | Msa1116930:CDS | 40.0% | |
GAGGGATCTTAATCTGTCTT+TGG | - | chr7_3:64986241-64986260 | Msa1116930:intron | 40.0% | |
TGTGGTTACATTAGGCCAAA+GGG | + | chr7_3:64986312-64986331 | None:intergenic | 40.0% | |
ACAATGCAGTACTCCTTGTT+TGG | - | chr7_3:64986654-64986673 | Msa1116930:intron | 40.0% | |
! | TTTGGCTCCATCTTGACTTT+CGG | - | chr7_3:64986672-64986691 | Msa1116930:intron | 40.0% |
TAACTCATAACCGTTCTCCA+AGG | - | chr7_3:64986963-64986982 | Msa1116930:intron | 40.0% | |
TTCGGTTAATCCTTGGAGAA+CGG | + | chr7_3:64986976-64986995 | None:intergenic | 40.0% | |
AGTAGTCTCCCAATATCCAA+AGG | + | chr7_3:64987040-64987059 | None:intergenic | 40.0% | |
GATATTGGGAGACTACTAAC+AGG | - | chr7_3:64987043-64987062 | Msa1116930:intron | 40.0% | |
GCAATTTCTGCTACGAAGAT+AGG | + | chr7_3:64987206-64987225 | None:intergenic | 40.0% | |
! | TACCTGGTTTAAGGTAGTCA+AGG | + | chr7_3:64987249-64987268 | None:intergenic | 40.0% |
ACGTGTAGCAAAAACATACC+TGG | + | chr7_3:64987265-64987284 | None:intergenic | 40.0% | |
GCATCTGGGTCATTCATAAT+TGG | - | chr7_3:64987422-64987441 | Msa1116930:CDS | 40.0% | |
TTGGAACAGTACTTTCATGG+AGG | - | chr7_3:64987441-64987460 | Msa1116930:CDS | 40.0% | |
TGGAACAGTACTTTCATGGA+GGG | - | chr7_3:64987442-64987461 | Msa1116930:CDS | 40.0% | |
! | TGGAGGGCTTTAGCTATAAT+CGG | - | chr7_3:64987458-64987477 | Msa1116930:intron | 40.0% |
CCACTAAGAAGAAGACCATA+CGG | - | chr7_3:64987510-64987529 | Msa1116930:intron | 40.0% | |
TGATAAGTGTCTGCAATTGC+AGG | - | chr7_3:64987583-64987602 | Msa1116930:intron | 40.0% | |
ACTGACCAAATAATGACTGC+AGG | - | chr7_3:64987737-64987756 | Msa1116930:intron | 40.0% | |
CTTTGCCTGCAGTCATTATT+TGG | + | chr7_3:64987745-64987764 | None:intergenic | 40.0% | |
!! | GAAGCATTGCAAATACTTCG+TGG | - | chr7_3:64987789-64987808 | Msa1116930:intron | 40.0% |
! | ATTTTTGTGACCTTGCCTTC+AGG | - | chr7_3:64987877-64987896 | Msa1116930:intron | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_3:64988237-64988256 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_3:64988099-64988118 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_3:64988237-64988256 | Msa1116930:intron | 40.0% |
AAGATATTTGCGCTCACTCA+CGG | - | chr7_3:64988310-64988329 | Msa1116930:intron | 40.0% | |
GTCTTAACTCTGTACTTGCT+TGG | + | chr7_3:64988491-64988510 | None:intergenic | 40.0% | |
TTATGGTCTGCCAGCAATTA+GGG | - | chr7_3:64988559-64988578 | Msa1116930:intron | 40.0% | |
!! | ATCATGGTTGAGTTGGATTC+GGG | + | chr7_3:64988912-64988931 | None:intergenic | 40.0% |
GCCACAAACTGCAATGAATG+TGG | + | chr7_3:64986076-64986095 | None:intergenic | 45.0% | |
CTGGAGATGAATATCCAGTC+TGG | + | chr7_3:64986205-64986224 | None:intergenic | 45.0% | |
AGCTCAAGATGCTATCAGGA+GGG | - | chr7_3:64986223-64986242 | Msa1116930:CDS | 45.0% | |
CTGTGGTTACATTAGGCCAA+AGG | + | chr7_3:64986313-64986332 | None:intergenic | 45.0% | |
AGTCAAGATGGAGCCAAACA+AGG | + | chr7_3:64986670-64986689 | None:intergenic | 45.0% | |
! | TTGACTTTCGGTGCGATGAT+TGG | - | chr7_3:64986684-64986703 | Msa1116930:intron | 45.0% |
TCAAGCGCTTTCAGTATTGC+AGG | - | chr7_3:64986879-64986898 | Msa1116930:intron | 45.0% | |
CAAGCGCTTTCAGTATTGCA+GGG | - | chr7_3:64986880-64986899 | Msa1116930:intron | 45.0% | |
GGGAGACTACTAACAGGATA+TGG | - | chr7_3:64987049-64987068 | Msa1116930:intron | 45.0% | |
AGCCTTGACTACCTTAAACC+AGG | - | chr7_3:64987244-64987263 | Msa1116930:CDS | 45.0% | |
! | ATGATTGTTAGTGGGGCATC+TGG | - | chr7_3:64987407-64987426 | Msa1116930:CDS | 45.0% |
! | TGATTGTTAGTGGGGCATCT+GGG | - | chr7_3:64987408-64987427 | Msa1116930:CDS | 45.0% |
! | GGGCTTTAGCTATAATCGGT+CGG | - | chr7_3:64987462-64987481 | Msa1116930:intron | 45.0% |
CCGTATGGTCTTCTTCTTAG+TGG | + | chr7_3:64987513-64987532 | None:intergenic | 45.0% | |
TAATGACTGCAGGCAAAGAG+AGG | - | chr7_3:64987747-64987766 | Msa1116930:intron | 45.0% | |
ACATTGTGCATGAAGCCTGA+AGG | + | chr7_3:64987895-64987914 | None:intergenic | 45.0% | |
TGTATCTTTCTCTGCCACAC+AGG | - | chr7_3:64987954-64987973 | Msa1116930:intron | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_3:64988236-64988255 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_3:64988236-64988255 | Msa1116930:intron | 45.0% |
ACGGAGGGAGTAGTTTAGAA+CGG | - | chr7_3:64988252-64988271 | Msa1116930:intron | 45.0% | |
AACGGCTCGCAAAACCAAAT+GGG | - | chr7_3:64988270-64988289 | Msa1116930:intron | 45.0% | |
TAAGATTGGGGTAGGGCTTA+TGG | - | chr7_3:64988542-64988561 | Msa1116930:intron | 45.0% | |
CTTATGGTCTGCCAGCAATT+AGG | - | chr7_3:64988558-64988577 | Msa1116930:intron | 45.0% | |
TATGGTCTGCCAGCAATTAG+GGG | - | chr7_3:64988560-64988579 | Msa1116930:intron | 45.0% | |
!! | CATTGATTCCCCCTAATTGC+TGG | + | chr7_3:64988572-64988591 | None:intergenic | 45.0% |
CAGCAATTAGGGGGAATCAA+TGG | - | chr7_3:64988570-64988589 | Msa1116930:intron | 45.0% | |
GTAGGATTTCCTTCTGCGAT+GGG | - | chr7_3:64988808-64988827 | Msa1116930:CDS | 45.0% | |
TAGGATTTCCTTCTGCGATG+GGG | - | chr7_3:64988809-64988828 | Msa1116930:CDS | 45.0% | |
ATTATACTCCCCATCGCAGA+AGG | + | chr7_3:64988820-64988839 | None:intergenic | 45.0% | |
!! | TCATGGTTGAGTTGGATTCG+GGG | + | chr7_3:64988911-64988930 | None:intergenic | 45.0% |
CAGATTGTGATCACAGGTGT+TGG | - | chr7_3:64988943-64988962 | Msa1116930:intron | 45.0% | |
CTCCAGCTCAAGATGCTATC+AGG | - | chr7_3:64986219-64986238 | Msa1116930:CDS | 50.0% | |
CTCCTGATAGCATCTTGAGC+TGG | + | chr7_3:64986224-64986243 | None:intergenic | 50.0% | |
CAGCTCAAGATGCTATCAGG+AGG | - | chr7_3:64986222-64986241 | Msa1116930:CDS | 50.0% | |
CATCGCACCGAAAGTCAAGA+TGG | + | chr7_3:64986682-64986701 | None:intergenic | 50.0% | |
GGACCTATTGCCGAATTCGT+TGG | - | chr7_3:64986720-64986739 | Msa1116930:intron | 50.0% | |
CGTCCAACGAATTCGGCAAT+AGG | + | chr7_3:64986726-64986745 | None:intergenic | 50.0% | |
TGCCGAATTCGTTGGACGAA+AGG | - | chr7_3:64986728-64986747 | Msa1116930:intron | 50.0% | |
GCCGAATTCGTTGGACGAAA+GGG | - | chr7_3:64986729-64986748 | Msa1116930:intron | 50.0% | |
CCCCTTTCGTCCAACGAATT+CGG | + | chr7_3:64986733-64986752 | None:intergenic | 50.0% | |
CCGAATTCGTTGGACGAAAG+GGG | - | chr7_3:64986730-64986749 | Msa1116930:intron | 50.0% | |
CGAATTCGTTGGACGAAAGG+GGG | - | chr7_3:64986731-64986750 | Msa1116930:intron | 50.0% | |
GGACGAAAGGGGGTAATTTC+AGG | - | chr7_3:64986741-64986760 | Msa1116930:intron | 50.0% | |
ATTGCGCCAAAAGAACGCAG+AGG | - | chr7_3:64987221-64987240 | Msa1116930:CDS | 50.0% | |
! | AAGGCTCCTCTGCGTTCTTT+TGG | + | chr7_3:64987230-64987249 | None:intergenic | 50.0% |
GCAACACAGCAGTGGGAATA+AGG | + | chr7_3:64987609-64987628 | None:intergenic | 50.0% | |
!!! | TCCCACTGCTGTGTTGCTTT+TGG | - | chr7_3:64987612-64987631 | Msa1116930:CDS | 50.0% |
CCCAAAAGCAACACAGCAGT+GGG | + | chr7_3:64987616-64987635 | None:intergenic | 50.0% | |
!!! | CCCACTGCTGTGTTGCTTTT+GGG | - | chr7_3:64987613-64987632 | Msa1116930:CDS | 50.0% |
ACCCAAAAGCAACACAGCAG+TGG | + | chr7_3:64987617-64987636 | None:intergenic | 50.0% | |
TCATTCCCGAGTCTCCTAGA+TGG | - | chr7_3:64987644-64987663 | Msa1116930:CDS | 50.0% | |
TACCAGCCATCTAGGAGACT+CGG | + | chr7_3:64987653-64987672 | None:intergenic | 50.0% | |
AGGACGCGCAAAAGATTCTG+TGG | - | chr7_3:64987767-64987786 | Msa1116930:intron | 50.0% | |
GAACGGCTCGCAAAACCAAA+TGG | - | chr7_3:64988269-64988288 | Msa1116930:intron | 50.0% | |
TATTTGCGCTCACTCACGGT+AGG | - | chr7_3:64988314-64988333 | Msa1116930:intron | 50.0% | |
ATGGTCTGCCAGCAATTAGG+GGG | - | chr7_3:64988561-64988580 | Msa1116930:intron | 50.0% | |
GGTAGGATTTCCTTCTGCGA+TGG | - | chr7_3:64988807-64988826 | Msa1116930:CDS | 50.0% | |
!! | CATGGTTGAGTTGGATTCGG+GGG | + | chr7_3:64988910-64988929 | None:intergenic | 50.0% |
CCAGCCTGCTCTATCTATGA+GGG | + | chr7_3:64988974-64988993 | None:intergenic | 50.0% | |
TCCAGCCTGCTCTATCTATG+AGG | + | chr7_3:64988975-64988994 | None:intergenic | 50.0% | |
GCGCTTTCAGTATTGCAGGG+TGG | - | chr7_3:64986883-64986902 | Msa1116930:intron | 55.0% | |
ACCAGCCATCTAGGAGACTC+GGG | + | chr7_3:64987652-64987671 | None:intergenic | 55.0% | |
GTGCATGAAGCCTGAAGGCA+AGG | + | chr7_3:64987890-64987909 | None:intergenic | 55.0% | |
GCTCGCAAAACCAAATGGGC+TGG | - | chr7_3:64988274-64988293 | Msa1116930:intron | 55.0% | |
GCAGCCCTCATAGATAGAGC+AGG | - | chr7_3:64988967-64988986 | Msa1116930:CDS | 55.0% | |
CCCTCATAGATAGAGCAGGC+TGG | - | chr7_3:64988971-64988990 | Msa1116930:CDS | 55.0% | |
! | AGGCTGGAAGCCCCTACTTT+TGG | - | chr7_3:64988987-64989006 | Msa1116930:CDS | 55.0% |
TCCCGAGTCTCCTAGATGGC+TGG | - | chr7_3:64987648-64987667 | Msa1116930:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 64985946 | 64989124 | 64985946 | ID=Msa1116930;Name=Msa1116930 |
chr7_3 | mRNA | 64985946 | 64989124 | 64985946 | ID=Msa1116930-mRNA-1;Parent=Msa1116930;Name=Msa1116930-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.81|0.75|1|1|1|12|53|334 |
chr7_3 | exon | 64985946 | 64986124 | 64985946 | ID=Msa1116930-mRNA-1:exon:15404;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64986215 | 64986258 | 64986215 | ID=Msa1116930-mRNA-1:exon:15403;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64986440 | 64986524 | 64986440 | ID=Msa1116930-mRNA-1:exon:15402;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64987219 | 64987311 | 64987219 | ID=Msa1116930-mRNA-1:exon:15401;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64987401 | 64987465 | 64987401 | ID=Msa1116930-mRNA-1:exon:15400;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64987591 | 64987666 | 64987591 | ID=Msa1116930-mRNA-1:exon:15399;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64987805 | 64987870 | 64987805 | ID=Msa1116930-mRNA-1:exon:15398;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64987977 | 64988042 | 64987977 | ID=Msa1116930-mRNA-1:exon:15397;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64988144 | 64988203 | 64988144 | ID=Msa1116930-mRNA-1:exon:15396;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64988318 | 64988407 | 64988318 | ID=Msa1116930-mRNA-1:exon:15395;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64988802 | 64988864 | 64988802 | ID=Msa1116930-mRNA-1:exon:15394;Parent=Msa1116930-mRNA-1 |
chr7_3 | exon | 64988954 | 64989124 | 64988954 | ID=Msa1116930-mRNA-1:exon:15393;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64988954 | 64989124 | 64988954 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64988802 | 64988864 | 64988802 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64988318 | 64988407 | 64988318 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64988144 | 64988203 | 64988144 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64987977 | 64988042 | 64987977 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64987805 | 64987870 | 64987805 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64987591 | 64987666 | 64987591 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64987401 | 64987465 | 64987401 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64987219 | 64987311 | 64987219 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64986440 | 64986524 | 64986440 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64986215 | 64986258 | 64986215 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | CDS | 64985999 | 64986124 | 64985999 | ID=Msa1116930-mRNA-1:cds;Parent=Msa1116930-mRNA-1 |
chr7_3 | three_prime_UTR | 64985946 | 64985998 | 64985946 | ID=Msa1116930-mRNA-1:three_prime_utr;Parent=Msa1116930-mRNA-1 |
Gene Sequence |
Protein sequence |